PDB Short entry for 3GNI HEADER SIGNALING PROTEIN/SIGNALING PROTEIN 17-MAR-09 3GNI TITLE STRUCTURE OF STRAD AND MO25 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN MO25; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CALCIUM-BINDING PROTEIN 39; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: STRAD ALPHA; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: PROTEIN KINASE DOMAIN; COMPND 10 SYNONYM: STE20-RELATED KINASE ADAPTER PROTEIN ALPHA, STE20-RELATED COMPND 11 ADAPTER PROTEIN, SEROLOGICALLY DEFINED BREAST CANCER ANTIGEN NY-BR- COMPND 12 96; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CAB39, MO25, CGI-66; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_CELL: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: POPC; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: STRADA, LYK5, STRAD; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_CELL: BL21(DE3)PLYSS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: POPC KEYWDS KINASE FOLD, PSEUDOKINASE, ALPHA HELICAL REPEAT PROTEIN, ADAPTOR KEYWDS 2 PROTEIN, ATP-BINDING, CELL CYCLE, KINASE, NUCLEOTIDE-BINDING, KEYWDS 3 NUCLEUS, PHOSPHOPROTEIN, TRANSFERASE, METAL BINDING PROTEIN- KEYWDS 4 TRANSFERASE COMPLEX, SIGNALING PROTEIN-SIGNALING PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.ZEQIRAJ,S.GOLDIE,D.R.ALESSI,D.M.F.VAN AALTEN REVDAT 4 06-SEP-23 3GNI 1 REMARK SEQADV REVDAT 3 13-JUL-11 3GNI 1 VERSN REVDAT 2 23-JUN-09 3GNI 1 JRNL REVDAT 1 16-JUN-09 3GNI 0 JRNL AUTH E.ZEQIRAJ,B.M.FILIPPI,S.GOLDIE,I.NAVRATILOVA,J.BOUDEAU, JRNL AUTH 2 M.DEAK,D.R.ALESSI,D.M.VAN AALTEN JRNL TITL ATP AND MO25ALPHA REGULATE THE CONFORMATIONAL STATE OF THE JRNL TITL 2 STRADALPHA PSEUDOKINASE AND ACTIVATION OF THE LKB1 TUMOUR JRNL TITL 3 SUPPRESSOR JRNL REF PLOS BIOL. V. 7 00126 2009 JRNL REFN ISSN 1544-9173 JRNL PMID 19513107 JRNL DOI 10.1371/JOURNAL.PBIO.1000126 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 33712 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.600 REMARK 3 FREE R VALUE TEST SET COUNT : 902 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2314 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.3740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5202 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.93000 REMARK 3 B22 (A**2) : -0.28000 REMARK 3 B33 (A**2) : -2.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.321 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.240 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.197 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.778 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5364 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7251 ; 1.277 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 633 ; 5.942 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 259 ;35.767 ;24.402 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 965 ;17.585 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;17.295 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 800 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4009 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2217 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3643 ; 0.298 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 171 ; 0.120 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 73 ; 0.191 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.207 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3296 ; 1.063 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5168 ; 1.685 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2343 ; 3.042 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2083 ; 4.452 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 14 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0983 17.9254 -17.5156 REMARK 3 T TENSOR REMARK 3 T11: 0.1893 T22: 0.2180 REMARK 3 T33: 0.4465 T12: 0.0108 REMARK 3 T13: -0.0778 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 9.4971 L22: 0.6788 REMARK 3 L33: 117.7653 L12: -2.4993 REMARK 3 L13: 33.3740 L23: -8.8839 REMARK 3 S TENSOR REMARK 3 S11: 0.1957 S12: 0.9983 S13: -0.1654 REMARK 3 S21: 0.3514 S22: -0.6873 S23: -0.7869 REMARK 3 S31: 0.2148 S32: 2.8933 S33: 0.4916 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 57 REMARK 3 ORIGIN FOR THE GROUP (A): 0.0855 11.9948 -9.8850 REMARK 3 T TENSOR REMARK 3 T11: 0.2073 T22: -0.0349 REMARK 3 T33: 0.0451 T12: -0.1164 REMARK 3 T13: -0.0121 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 13.1125 L22: 4.4585 REMARK 3 L33: 4.9357 L12: -2.5829 REMARK 3 L13: 0.9840 L23: -2.8308 REMARK 3 S TENSOR REMARK 3 S11: -0.1201 S12: 0.4179 S13: 0.3863 REMARK 3 S21: 0.1968 S22: 0.0370 S23: -0.0484 REMARK 3 S31: -0.5530 S32: 0.1942 S33: 0.0831 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 58 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0704 5.2438 -5.0367 REMARK 3 T TENSOR REMARK 3 T11: 0.1344 T22: 0.1047 REMARK 3 T33: 0.1320 T12: -0.1208 REMARK 3 T13: 0.0181 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 4.7337 L22: 4.6765 REMARK 3 L33: 6.1673 L12: -0.6983 REMARK 3 L13: 1.8483 L23: -0.8076 REMARK 3 S TENSOR REMARK 3 S11: -0.2305 S12: -0.0433 S13: 0.2051 REMARK 3 S21: 0.0079 S22: -0.0134 S23: -0.6901 REMARK 3 S31: -0.3397 S32: 0.9287 S33: 0.2439 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 108 A 159 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3465 -4.4418 3.6649 REMARK 3 T TENSOR REMARK 3 T11: 0.0600 T22: 0.0182 REMARK 3 T33: 0.0065 T12: -0.0404 REMARK 3 T13: 0.0010 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 5.8232 L22: 5.1488 REMARK 3 L33: 7.6274 L12: -0.3164 REMARK 3 L13: 3.2830 L23: -0.0865 REMARK 3 S TENSOR REMARK 3 S11: -0.1959 S12: -0.0699 S13: 0.1170 REMARK 3 S21: 0.2311 S22: 0.0726 S23: -0.4440 REMARK 3 S31: -0.5188 S32: 0.5438 S33: 0.1233 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 160 A 192 REMARK 3 ORIGIN FOR THE GROUP (A): -0.8213 -16.9612 2.2626 REMARK 3 T TENSOR REMARK 3 T11: -0.0456 T22: -0.0123 REMARK 3 T33: 0.0227 T12: -0.0071 REMARK 3 T13: 0.0307 T23: 0.0629 REMARK 3 L TENSOR REMARK 3 L11: 3.0698 L22: 3.5577 REMARK 3 L33: 9.3783 L12: 0.4358 REMARK 3 L13: 2.1311 L23: 1.8296 REMARK 3 S TENSOR REMARK 3 S11: -0.1203 S12: -0.1053 S13: -0.0993 REMARK 3 S21: -0.0058 S22: 0.1157 S23: 0.2471 REMARK 3 S31: -0.4311 S32: -0.1683 S33: 0.0046 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 193 A 205 REMARK 3 ORIGIN FOR THE GROUP (A): 9.8747 -19.4064 12.8491 REMARK 3 T TENSOR REMARK 3 T11: 0.1158 T22: 0.1070 REMARK 3 T33: 0.0049 T12: 0.0746 REMARK 3 T13: -0.0724 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 17.4089 L22: 8.7880 REMARK 3 L33: 4.6312 L12: 5.9454 REMARK 3 L13: -5.4651 L23: -5.0365 REMARK 3 S TENSOR REMARK 3 S11: 0.1894 S12: -0.9648 S13: -0.2380 REMARK 3 S21: 0.9583 S22: -0.0685 S23: -0.1920 REMARK 3 S31: 0.1131 S32: 0.5886 S33: -0.1209 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 206 A 237 REMARK 3 ORIGIN FOR THE GROUP (A): -0.6457 -28.1826 4.4044 REMARK 3 T TENSOR REMARK 3 T11: -0.0768 T22: -0.0224 REMARK 3 T33: 0.1224 T12: -0.0325 REMARK 3 T13: 0.0422 T23: 0.0647 REMARK 3 L TENSOR REMARK 3 L11: 2.9112 L22: 5.4230 REMARK 3 L33: 10.0953 L12: -1.2118 REMARK 3 L13: 0.8813 L23: 0.7706 REMARK 3 S TENSOR REMARK 3 S11: -0.0393 S12: 0.0605 S13: -0.2224 REMARK 3 S21: 0.1358 S22: -0.1200 S23: 0.4614 REMARK 3 S31: 0.1021 S32: -0.1805 S33: 0.1593 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 238 A 271 REMARK 3 ORIGIN FOR THE GROUP (A): 3.1013 -36.7343 7.4036 REMARK 3 T TENSOR REMARK 3 T11: -0.0003 T22: 0.0498 REMARK 3 T33: 0.1729 T12: 0.0706 REMARK 3 T13: 0.0802 T23: 0.1127 REMARK 3 L TENSOR REMARK 3 L11: 1.6831 L22: 6.1642 REMARK 3 L33: 4.0993 L12: -0.5708 REMARK 3 L13: 1.4491 L23: -0.6066 REMARK 3 S TENSOR REMARK 3 S11: -0.0610 S12: -0.1179 S13: -0.1601 REMARK 3 S21: 0.4256 S22: 0.0758 S23: 0.2827 REMARK 3 S31: 0.3013 S32: -0.0371 S33: -0.0148 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 272 A 316 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3084 -46.2143 5.6517 REMARK 3 T TENSOR REMARK 3 T11: -0.0228 T22: 0.0038 REMARK 3 T33: 0.2029 T12: 0.0625 REMARK 3 T13: -0.0117 T23: 0.0781 REMARK 3 L TENSOR REMARK 3 L11: 4.2123 L22: 7.5457 REMARK 3 L33: 9.8658 L12: -0.1847 REMARK 3 L13: -0.4661 L23: -2.7292 REMARK 3 S TENSOR REMARK 3 S11: 0.1497 S12: -0.0951 S13: -0.3289 REMARK 3 S21: 0.0627 S22: 0.1169 S23: 0.2328 REMARK 3 S31: 0.3774 S32: 0.2526 S33: -0.2667 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 317 A 336 REMARK 3 ORIGIN FOR THE GROUP (A): 12.2026 -50.3174 7.5462 REMARK 3 T TENSOR REMARK 3 T11: 0.0863 T22: 0.0756 REMARK 3 T33: 0.2892 T12: 0.0550 REMARK 3 T13: -0.0833 T23: 0.0535 REMARK 3 L TENSOR REMARK 3 L11: 10.2824 L22: 9.3105 REMARK 3 L33: 15.1217 L12: 1.4896 REMARK 3 L13: -6.7556 L23: -7.7979 REMARK 3 S TENSOR REMARK 3 S11: -0.1162 S12: -0.6223 S13: -0.5824 REMARK 3 S21: 0.0643 S22: 0.0220 S23: 0.2003 REMARK 3 S31: 0.9878 S32: 0.3755 S33: 0.0942 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -15 B -2 REMARK 3 ORIGIN FOR THE GROUP (A): -13.9458 3.5366 -3.4728 REMARK 3 T TENSOR REMARK 3 T11: 0.0909 T22: 0.1660 REMARK 3 T33: 0.2904 T12: 0.1544 REMARK 3 T13: 0.1932 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 24.0853 L22: 24.3759 REMARK 3 L33: 13.2112 L12: 19.3876 REMARK 3 L13: 12.0092 L23: 1.7078 REMARK 3 S TENSOR REMARK 3 S11: 0.4429 S12: 0.1579 S13: -0.3497 REMARK 3 S21: 0.2402 S22: -0.0370 S23: -0.1623 REMARK 3 S31: 0.3890 S32: -0.7376 S33: -0.4060 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 60 B 102 REMARK 3 ORIGIN FOR THE GROUP (A): -8.6413 -23.2075 -24.3158 REMARK 3 T TENSOR REMARK 3 T11: 0.0465 T22: 0.1982 REMARK 3 T33: 0.0790 T12: -0.0139 REMARK 3 T13: -0.0576 T23: -0.0691 REMARK 3 L TENSOR REMARK 3 L11: 8.0679 L22: 6.0916 REMARK 3 L33: 11.1580 L12: -1.5235 REMARK 3 L13: -5.2293 L23: 3.4712 REMARK 3 S TENSOR REMARK 3 S11: 0.0943 S12: 0.8474 S13: -0.3772 REMARK 3 S21: -0.4203 S22: -0.3744 S23: 0.5286 REMARK 3 S31: -0.0451 S32: -1.5653 S33: 0.2800 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 103 B 132 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2435 -18.2881 -17.2990 REMARK 3 T TENSOR REMARK 3 T11: -0.0082 T22: 0.0847 REMARK 3 T33: 0.1860 T12: -0.0025 REMARK 3 T13: -0.0209 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 0.3336 L22: 9.4970 REMARK 3 L33: 7.9088 L12: 1.6072 REMARK 3 L13: -1.4631 L23: -5.4324 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: -0.2813 S13: -0.0605 REMARK 3 S21: -0.3998 S22: -0.1354 S23: -0.0299 REMARK 3 S31: -0.1498 S32: 0.2116 S33: 0.1015 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 133 B 166 REMARK 3 ORIGIN FOR THE GROUP (A): -2.2771 -20.6720 -30.0454 REMARK 3 T TENSOR REMARK 3 T11: -0.0061 T22: 0.0674 REMARK 3 T33: 0.0676 T12: 0.0864 REMARK 3 T13: -0.0900 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: 2.2690 L22: 1.1369 REMARK 3 L33: 19.5662 L12: 1.2280 REMARK 3 L13: -4.7457 L23: -1.1899 REMARK 3 S TENSOR REMARK 3 S11: 0.0408 S12: 0.1542 S13: -0.0148 REMARK 3 S21: -0.3767 S22: 0.0233 S23: 0.1700 REMARK 3 S31: -0.1935 S32: -0.4011 S33: -0.0641 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 167 B 219 REMARK 3 ORIGIN FOR THE GROUP (A): 7.2589 -10.0117 -31.0593 REMARK 3 T TENSOR REMARK 3 T11: 0.2051 T22: 0.0562 REMARK 3 T33: 0.0304 T12: -0.0077 REMARK 3 T13: 0.0397 T23: -0.0546 REMARK 3 L TENSOR REMARK 3 L11: 3.8003 L22: 4.3157 REMARK 3 L33: 6.0024 L12: 0.7212 REMARK 3 L13: 0.5302 L23: 0.2492 REMARK 3 S TENSOR REMARK 3 S11: 0.2179 S12: -0.1231 S13: 0.3061 REMARK 3 S21: -0.3909 S22: -0.2428 S23: 0.1702 REMARK 3 S31: -0.8166 S32: 0.1451 S33: 0.0249 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 220 B 240 REMARK 3 ORIGIN FOR THE GROUP (A): 19.3550 -14.7019 -17.7010 REMARK 3 T TENSOR REMARK 3 T11: 0.2619 T22: 0.7152 REMARK 3 T33: 0.2105 T12: -0.1345 REMARK 3 T13: -0.0160 T23: 0.0332 REMARK 3 L TENSOR REMARK 3 L11: 4.7235 L22: 19.3518 REMARK 3 L33: 7.1870 L12: -2.0436 REMARK 3 L13: 0.2482 L23: 5.2433 REMARK 3 S TENSOR REMARK 3 S11: -0.1012 S12: -0.0585 S13: 0.0530 REMARK 3 S21: 0.0972 S22: 0.3207 S23: -0.4192 REMARK 3 S31: -0.3176 S32: 0.5739 S33: -0.2195 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 241 B 278 REMARK 3 ORIGIN FOR THE GROUP (A): 20.1664 -16.0078 -31.9448 REMARK 3 T TENSOR REMARK 3 T11: 0.1149 T22: 0.4086 REMARK 3 T33: 0.1527 T12: -0.0646 REMARK 3 T13: 0.0230 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 4.1976 L22: 6.1304 REMARK 3 L33: 5.2262 L12: 0.6756 REMARK 3 L13: 1.7933 L23: 3.1666 REMARK 3 S TENSOR REMARK 3 S11: 0.3516 S12: 0.0350 S13: -0.2458 REMARK 3 S21: 0.3522 S22: 0.0234 S23: -0.6542 REMARK 3 S31: 0.1501 S32: 1.2053 S33: -0.3750 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 279 B 356 REMARK 3 ORIGIN FOR THE GROUP (A): 22.0340 -16.4202 -40.6211 REMARK 3 T TENSOR REMARK 3 T11: 0.3431 T22: 0.5230 REMARK 3 T33: 0.3297 T12: -0.1703 REMARK 3 T13: 0.0812 T23: -0.0800 REMARK 3 L TENSOR REMARK 3 L11: 9.1112 L22: 14.4438 REMARK 3 L33: 8.2520 L12: -7.3237 REMARK 3 L13: 2.7880 L23: 0.9546 REMARK 3 S TENSOR REMARK 3 S11: 0.0928 S12: -0.0681 S13: -1.0283 REMARK 3 S21: -0.3600 S22: 0.7688 S23: -0.2619 REMARK 3 S31: -0.2113 S32: 0.9245 S33: -0.8616 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 357 B 431 REMARK 3 ORIGIN FOR THE GROUP (A): 7.4469 -14.1333 -32.1989 REMARK 3 T TENSOR REMARK 3 T11: 0.2009 T22: 0.0784 REMARK 3 T33: 0.1287 T12: 0.0344 REMARK 3 T13: -0.0110 T23: -0.1564 REMARK 3 L TENSOR REMARK 3 L11: 1.5069 L22: 2.4970 REMARK 3 L33: 5.9131 L12: 0.2015 REMARK 3 L13: -1.1342 L23: -1.9974 REMARK 3 S TENSOR REMARK 3 S11: 0.2037 S12: 0.2136 S13: 0.1615 REMARK 3 S21: -0.4901 S22: 0.0248 S23: 0.1647 REMARK 3 S31: -0.7008 S32: 0.0436 S33: -0.2285 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 342 A 342 REMARK 3 RESIDUE RANGE : B 1 B 1 REMARK 3 ORIGIN FOR THE GROUP (A): 6.5264 -19.1962 -21.6787 REMARK 3 T TENSOR REMARK 3 T11: -0.0237 T22: 0.0432 REMARK 3 T33: 0.0527 T12: 0.0240 REMARK 3 T13: -0.0553 T23: 0.1477 REMARK 3 L TENSOR REMARK 3 L11: 18.4068 L22: 11.0167 REMARK 3 L33: 29.0001 L12: 10.2138 REMARK 3 L13: 17.3011 L23: 12.8957 REMARK 3 S TENSOR REMARK 3 S11: 0.4358 S12: -0.1530 S13: -0.9715 REMARK 3 S21: 0.1821 S22: -0.0722 S23: -0.8722 REMARK 3 S31: 0.9990 S32: 0.7446 S33: -0.3635 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 343 A 419 REMARK 3 ORIGIN FOR THE GROUP (A): 3.5060 -14.3895 -8.4316 REMARK 3 T TENSOR REMARK 3 T11: -0.0089 T22: 0.0617 REMARK 3 T33: 0.0713 T12: 0.0105 REMARK 3 T13: 0.0142 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 0.6127 L22: 0.5274 REMARK 3 L33: 0.7079 L12: -0.2711 REMARK 3 L13: 0.1011 L23: 0.4859 REMARK 3 S TENSOR REMARK 3 S11: -0.0466 S12: -0.0889 S13: -0.0384 REMARK 3 S21: -0.0680 S22: 0.0367 S23: 0.0321 REMARK 3 S31: -0.1289 S32: 0.1204 S33: 0.0099 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GNI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000052081. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8730 REMARK 200 MONOCHROMATOR : HORIZONTALLY DIFFRACTING SI REMARK 200 (111) MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34668 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.01000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.61700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRIES 1UPK AND 1U5R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.4, 10% PEG8000, 0.25 REMARK 280 MICROL OF 1 M NDSB-256, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.83900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.14600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.43700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.14600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.83900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.43700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 337 REMARK 465 GLN A 338 REMARK 465 GLN A 339 REMARK 465 GLU A 340 REMARK 465 ALA A 341 REMARK 465 MET B -16 REMARK 465 GLY B -1 REMARK 465 MET B 59 REMARK 465 LEU B 292 REMARK 465 ASN B 293 REMARK 465 GLY B 294 REMARK 465 THR B 295 REMARK 465 VAL B 296 REMARK 465 PRO B 297 REMARK 465 CYS B 298 REMARK 465 LEU B 299 REMARK 465 LEU B 300 REMARK 465 ASP B 301 REMARK 465 THR B 302 REMARK 465 SER B 303 REMARK 465 THR B 304 REMARK 465 ILE B 305 REMARK 465 PRO B 306 REMARK 465 ALA B 307 REMARK 465 GLU B 308 REMARK 465 GLU B 309 REMARK 465 LEU B 310 REMARK 465 THR B 311 REMARK 465 MET B 312 REMARK 465 SER B 313 REMARK 465 PRO B 314 REMARK 465 SER B 315 REMARK 465 ARG B 316 REMARK 465 SER B 317 REMARK 465 VAL B 318 REMARK 465 ALA B 319 REMARK 465 ASN B 320 REMARK 465 SER B 321 REMARK 465 GLY B 322 REMARK 465 LEU B 323 REMARK 465 SER B 324 REMARK 465 ASP B 325 REMARK 465 SER B 326 REMARK 465 LEU B 327 REMARK 465 THR B 328 REMARK 465 THR B 329 REMARK 465 SER B 330 REMARK 465 THR B 331 REMARK 465 PRO B 332 REMARK 465 ARG B 333 REMARK 465 PRO B 334 REMARK 465 SER B 335 REMARK 465 ASN B 336 REMARK 465 GLY B 337 REMARK 465 ASP B 338 REMARK 465 SER B 339 REMARK 465 PRO B 340 REMARK 465 SER B 341 REMARK 465 HIS B 342 REMARK 465 PRO B 343 REMARK 465 TYR B 344 REMARK 465 HIS B 345 REMARK 465 ARG B 346 REMARK 465 THR B 347 REMARK 465 LYS B 383 REMARK 465 ARG B 384 REMARK 465 ARG B 385 REMARK 465 ASN B 402 REMARK 465 PHE B 403 REMARK 465 GLU B 404 REMARK 465 GLY B 405 REMARK 465 SER B 406 REMARK 465 GLN B 407 REMARK 465 SER B 408 REMARK 465 GLN B 409 REMARK 465 ASP B 410 REMARK 465 HIS B 411 REMARK 465 SER B 412 REMARK 465 GLY B 413 REMARK 465 ILE B 414 REMARK 465 PHE B 415 REMARK 465 GLY B 416 REMARK 465 LEU B 417 REMARK 465 VAL B 418 REMARK 465 THR B 419 REMARK 465 ASN B 420 REMARK 465 LEU B 421 REMARK 465 GLU B 422 REMARK 465 GLU B 423 REMARK 465 LEU B 424 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 63 CD GLN A 63 NE2 0.180 REMARK 500 GLU B -7 CD GLU B -7 OE2 0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 89 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 286 54.48 -110.98 REMARK 500 TYR B -4 -6.41 153.57 REMARK 500 LEU B 72 -135.38 -103.46 REMARK 500 PHE B 79 66.86 36.49 REMARK 500 ASN B 141 -20.47 85.93 REMARK 500 HIS B 162 -55.22 -156.51 REMARK 500 PHE B 163 48.28 -84.83 REMARK 500 ARG B 194 4.11 83.33 REMARK 500 SER B 195 37.73 -149.97 REMARK 500 SER B 212 -155.43 -109.39 REMARK 500 LYS B 239 -33.16 128.90 REMARK 500 ASN B 252 -2.86 76.55 REMARK 500 LEU B 253 -146.13 -96.21 REMARK 500 ASP B 281 -1.79 68.43 REMARK 500 PRO B 283 155.06 -49.32 REMARK 500 THR B 285 45.36 -77.54 REMARK 500 GLU B 388 -14.15 -141.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA B 139 ASP B 140 -133.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 342 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UPK RELATED DB: PDB REMARK 900 RELATED ID: 1UPL RELATED DB: PDB DBREF 3GNI A 1 341 UNP Q9Y376 CAB39_HUMAN 1 341 DBREF 3GNI B 59 431 UNP Q7RTN6 STRAA_HUMAN 59 431 SEQADV 3GNI MET B -16 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI ALA B -15 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI HIS B -14 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI HIS B -13 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI HIS B -12 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI HIS B -11 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI HIS B -10 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI HIS B -9 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI MET B -8 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI GLU B -7 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI ASN B -6 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI LEU B -5 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI TYR B -4 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI PHE B -3 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI GLN B -2 UNP Q7RTN6 EXPRESSION TAG SEQADV 3GNI GLY B -1 UNP Q7RTN6 EXPRESSION TAG SEQRES 1 A 341 MET PRO PHE PRO PHE GLY LYS SER HIS LYS SER PRO ALA SEQRES 2 A 341 ASP ILE VAL LYS ASN LEU LYS GLU SER MET ALA VAL LEU SEQRES 3 A 341 GLU LYS GLN ASP ILE SER ASP LYS LYS ALA GLU LYS ALA SEQRES 4 A 341 THR GLU GLU VAL SER LYS ASN LEU VAL ALA MET LYS GLU SEQRES 5 A 341 ILE LEU TYR GLY THR ASN GLU LYS GLU PRO GLN THR GLU SEQRES 6 A 341 ALA VAL ALA GLN LEU ALA GLN GLU LEU TYR ASN SER GLY SEQRES 7 A 341 LEU LEU SER THR LEU VAL ALA ASP LEU GLN LEU ILE ASP SEQRES 8 A 341 PHE GLU GLY LYS LYS ASP VAL ALA GLN ILE PHE ASN ASN SEQRES 9 A 341 ILE LEU ARG ARG GLN ILE GLY THR ARG THR PRO THR VAL SEQRES 10 A 341 GLU TYR ILE CYS THR GLN GLN ASN ILE LEU PHE MET LEU SEQRES 11 A 341 LEU LYS GLY TYR GLU SER PRO GLU ILE ALA LEU ASN CYS SEQRES 12 A 341 GLY ILE MET LEU ARG GLU CYS ILE ARG HIS GLU PRO LEU SEQRES 13 A 341 ALA LYS ILE ILE LEU TRP SER GLU GLN PHE TYR ASP PHE SEQRES 14 A 341 PHE ARG TYR VAL GLU MET SER THR PHE ASP ILE ALA SER SEQRES 15 A 341 ASP ALA PHE ALA THR PHE LYS ASP LEU LEU THR ARG HIS SEQRES 16 A 341 LYS LEU LEU SER ALA GLU PHE LEU GLU GLN HIS TYR ASP SEQRES 17 A 341 ARG PHE PHE SER GLU TYR GLU LYS LEU LEU HIS SER GLU SEQRES 18 A 341 ASN TYR VAL THR LYS ARG GLN SER LEU LYS LEU LEU GLY SEQRES 19 A 341 GLU LEU LEU LEU ASP ARG HIS ASN PHE THR ILE MET THR SEQRES 20 A 341 LYS TYR ILE SER LYS PRO GLU ASN LEU LYS LEU MET MET SEQRES 21 A 341 ASN LEU LEU ARG ASP LYS SER ARG ASN ILE GLN PHE GLU SEQRES 22 A 341 ALA PHE HIS VAL PHE LYS VAL PHE VAL ALA ASN PRO ASN SEQRES 23 A 341 LYS THR GLN PRO ILE LEU ASP ILE LEU LEU LYS ASN GLN SEQRES 24 A 341 ALA LYS LEU ILE GLU PHE LEU SER LYS PHE GLN ASN ASP SEQRES 25 A 341 ARG THR GLU ASP GLU GLN PHE ASN ASP GLU LYS THR TYR SEQRES 26 A 341 LEU VAL LYS GLN ILE ARG ASP LEU LYS ARG PRO ALA GLN SEQRES 27 A 341 GLN GLU ALA SEQRES 1 B 389 MET ALA HIS HIS HIS HIS HIS HIS MET GLU ASN LEU TYR SEQRES 2 B 389 PHE GLN GLY MET SER SER PHE LEU PRO GLU GLY GLY CYS SEQRES 3 B 389 TYR GLU LEU LEU THR VAL ILE GLY LYS GLY PHE GLU ASP SEQRES 4 B 389 LEU MET THR VAL ASN LEU ALA ARG TYR LYS PRO THR GLY SEQRES 5 B 389 GLU TYR VAL THR VAL ARG ARG ILE ASN LEU GLU ALA CYS SEQRES 6 B 389 SER ASN GLU MET VAL THR PHE LEU GLN GLY GLU LEU HIS SEQRES 7 B 389 VAL SER LYS LEU PHE ASN HIS PRO ASN ILE VAL PRO TYR SEQRES 8 B 389 ARG ALA THR PHE ILE ALA ASP ASN GLU LEU TRP VAL VAL SEQRES 9 B 389 THR SER PHE MET ALA TYR GLY SER ALA LYS ASP LEU ILE SEQRES 10 B 389 CYS THR HIS PHE MET ASP GLY MET ASN GLU LEU ALA ILE SEQRES 11 B 389 ALA TYR ILE LEU GLN GLY VAL LEU LYS ALA LEU ASP TYR SEQRES 12 B 389 ILE HIS HIS MET GLY TYR VAL HIS ARG SER VAL LYS ALA SEQRES 13 B 389 SER HIS ILE LEU ILE SER VAL ASP GLY LYS VAL TYR LEU SEQRES 14 B 389 SER GLY LEU ARG SER ASN LEU SER MET ILE SER HIS GLY SEQRES 15 B 389 GLN ARG GLN ARG VAL VAL HIS ASP PHE PRO LYS TYR SER SEQRES 16 B 389 VAL LYS VAL LEU PRO TRP LEU SER PRO GLU VAL LEU GLN SEQRES 17 B 389 GLN ASN LEU GLN GLY TYR ASP ALA LYS SER ASP ILE TYR SEQRES 18 B 389 SER VAL GLY ILE THR ALA CYS GLU LEU ALA ASN GLY HIS SEQRES 19 B 389 VAL PRO PHE LYS ASP MET PRO ALA THR GLN MET LEU LEU SEQRES 20 B 389 GLU LYS LEU ASN GLY THR VAL PRO CYS LEU LEU ASP THR SEQRES 21 B 389 SER THR ILE PRO ALA GLU GLU LEU THR MET SER PRO SER SEQRES 22 B 389 ARG SER VAL ALA ASN SER GLY LEU SER ASP SER LEU THR SEQRES 23 B 389 THR SER THR PRO ARG PRO SER ASN GLY ASP SER PRO SER SEQRES 24 B 389 HIS PRO TYR HIS ARG THR PHE SER PRO HIS PHE HIS HIS SEQRES 25 B 389 PHE VAL GLU GLN CYS LEU GLN ARG ASN PRO ASP ALA ARG SEQRES 26 B 389 PRO SER ALA SER THR LEU LEU ASN HIS SER PHE PHE LYS SEQRES 27 B 389 GLN ILE LYS ARG ARG ALA SER GLU ALA LEU PRO GLU LEU SEQRES 28 B 389 LEU ARG PRO VAL THR PRO ILE THR ASN PHE GLU GLY SER SEQRES 29 B 389 GLN SER GLN ASP HIS SER GLY ILE PHE GLY LEU VAL THR SEQRES 30 B 389 ASN LEU GLU GLU LEU GLU VAL ASP ASP TRP GLU PHE HET CIT A 342 13 HET ATP B 1 31 HETNAM CIT CITRIC ACID HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 3 CIT C6 H8 O7 FORMUL 4 ATP C10 H16 N5 O13 P3 FORMUL 5 HOH *77(H2 O) HELIX 1 1 SER A 11 LYS A 28 1 18 HELIX 2 2 SER A 32 GLY A 56 1 25 HELIX 3 3 GLN A 63 GLY A 78 1 16 HELIX 4 4 GLY A 78 ASP A 86 1 9 HELIX 5 5 LEU A 87 ILE A 90 5 4 HELIX 6 6 ASP A 91 ARG A 107 1 17 HELIX 7 7 THR A 114 GLN A 123 1 10 HELIX 8 8 GLN A 124 GLY A 133 1 10 HELIX 9 9 TYR A 134 SER A 136 5 3 HELIX 10 10 ILE A 139 ILE A 151 1 13 HELIX 11 11 HIS A 153 TRP A 162 1 10 HELIX 12 12 GLU A 164 TYR A 167 5 4 HELIX 13 13 ASP A 168 VAL A 173 1 6 HELIX 14 14 THR A 177 ARG A 194 1 18 HELIX 15 15 HIS A 195 HIS A 206 1 12 HELIX 16 16 HIS A 206 LEU A 218 1 13 HELIX 17 17 ASN A 222 LEU A 238 1 17 HELIX 18 18 ASP A 239 HIS A 241 5 3 HELIX 19 19 ASN A 242 ILE A 250 1 9 HELIX 20 20 LYS A 252 LEU A 263 1 12 HELIX 21 21 SER A 267 ASN A 284 1 18 HELIX 22 22 THR A 288 ASN A 298 1 11 HELIX 23 23 ASN A 298 LYS A 308 1 11 HELIX 24 24 ASP A 316 ASP A 332 1 17 HELIX 25 25 HIS B -10 LEU B -5 1 6 HELIX 26 26 GLU B 65 GLY B 67 5 3 HELIX 27 27 GLU B 105 CYS B 107 5 3 HELIX 28 28 SER B 108 PHE B 125 1 18 HELIX 29 29 SER B 154 HIS B 162 1 9 HELIX 30 30 ASN B 168 MET B 189 1 22 HELIX 31 31 LYS B 197 SER B 199 5 3 HELIX 32 32 GLY B 213 ASN B 217 5 5 HELIX 33 33 VAL B 240 LEU B 244 5 5 HELIX 34 34 SER B 245 GLN B 250 1 6 HELIX 35 35 ALA B 258 GLY B 275 1 18 HELIX 36 36 GLN B 286 LYS B 291 1 6 HELIX 37 37 SER B 349 LEU B 360 1 12 HELIX 38 38 SER B 369 LEU B 374 1 6 HELIX 39 39 ASN B 375 ILE B 382 5 8 HELIX 40 40 ALA B 389 LEU B 394 1 6 SHEET 1 A 5 TYR B 69 GLY B 78 0 SHEET 2 A 5 MET B 83 TYR B 90 -1 O VAL B 85 N ILE B 75 SHEET 3 A 5 TYR B 96 ASN B 103 -1 O VAL B 99 N ASN B 86 SHEET 4 A 5 GLU B 142 SER B 148 -1 O VAL B 145 N ARG B 100 SHEET 5 A 5 TYR B 133 ALA B 139 -1 N PHE B 137 O TRP B 144 SHEET 1 B 2 TYR B 191 VAL B 192 0 SHEET 2 B 2 LEU B 218 SER B 219 -1 O LEU B 218 N VAL B 192 SHEET 1 C 2 ILE B 201 ILE B 203 0 SHEET 2 C 2 VAL B 209 LEU B 211 -1 O TYR B 210 N LEU B 202 SHEET 1 D 2 ILE B 221 SER B 222 0 SHEET 2 D 2 GLN B 225 ARG B 226 -1 O GLN B 225 N SER B 222 CISPEP 1 ARG B 395 PRO B 396 0 7.31 SITE 1 AC1 22 HOH A 346 HOH A 360 HOH A 365 HOH A 370 SITE 2 AC1 22 HOH A 376 HOH A 401 ILE B 75 GLY B 76 SITE 3 AC1 22 LYS B 77 GLY B 78 PHE B 79 MET B 83 SITE 4 AC1 22 THR B 98 ARG B 100 THR B 147 SER B 148 SITE 5 AC1 22 MET B 150 ASP B 157 SER B 199 HIS B 200 SITE 6 AC1 22 LEU B 202 ARG B 215 SITE 1 AC2 4 ARG A 107 ARG A 152 ARG A 194 HIS B 223 CRYST1 73.678 82.874 134.292 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013572 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012066 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007446 0.00000