PDB Short entry for 3GXI HEADER HYDROLASE 02-APR-09 3GXI TITLE CRYSTAL STRUCTURE OF ACID-BETA-GLUCOSIDASE AT PH 5.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSYLCERAMIDASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: BETA-GLUCOCEREBROSIDASE, ACID BETA-GLUCOSIDASE, D-GLUCOSYL- COMPND 5 N-ACYLSPHINGOSINE GLUCOHYDROLASE, ALGLUCERASE, IMIGLUCERASE; COMPND 6 EC: 3.2.1.45; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GBA, GC, GLUC; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS HYDROLASE, ALTERNATIVE INITIATION, DISEASE MUTATION, DISULFIDE BOND, KEYWDS 2 GAUCHER DISEASE, GLYCOPROTEIN, GLYCOSIDASE, ICHTHYOSIS, LIPID KEYWDS 3 METABOLISM, LYSOSOME, MEMBRANE, SPHINGOLIPID METABOLISM EXPDTA X-RAY DIFFRACTION AUTHOR R.L.LIEBERMAN REVDAT 4 29-JUL-20 3GXI 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 13-JUL-11 3GXI 1 VERSN REVDAT 2 16-JUN-09 3GXI 1 JRNL REVDAT 1 05-MAY-09 3GXI 0 JRNL AUTH R.L.LIEBERMAN,J.A.D'AQUINO,D.RINGE,G.A.PETSKO JRNL TITL EFFECTS OF PH AND IMINOSUGAR PHARMACOLOGICAL CHAPERONES ON JRNL TITL 2 LYSOSOMAL GLYCOSIDASE STRUCTURE AND STABILITY. JRNL REF BIOCHEMISTRY V. 48 4816 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19374450 JRNL DOI 10.1021/BI9002265 REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 227766 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 11460 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.84 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.89 REMARK 3 REFLECTION IN BIN (WORKING SET) : 12409 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.2930 REMARK 3 BIN FREE R VALUE SET COUNT : 684 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15720 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 371 REMARK 3 SOLVENT ATOMS : 1679 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.288 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 16602 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 22732 ; 1.683 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1984 ; 7.130 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 720 ;37.708 ;23.444 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2518 ;15.626 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 84 ;21.020 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2413 ; 0.123 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12532 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 8530 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 11053 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1737 ; 0.265 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 71 ; 0.212 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 41 ; 0.094 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 10177 ; 1.097 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 16074 ; 1.770 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 7282 ; 2.654 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 6508 ; 4.019 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3GXI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-09. REMARK 100 THE DEPOSITION ID IS D_1000052429. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 227766 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.840 REMARK 200 RESOLUTION RANGE LOW (A) : 141.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.85650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 68550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -334.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 70680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -321.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 91.71300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -157.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -153.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB THR C 379 O HOH C 766 1.76 REMARK 500 NE ARG A 44 O HOH A 763 1.79 REMARK 500 NH1 ARG A 44 O2 PO4 A 502 1.87 REMARK 500 SG CYS B 126 O HOH B 757 1.88 REMARK 500 O HOH B 513 O HOH B 757 1.92 REMARK 500 NH2 ARG A 44 O HOH A 763 1.95 REMARK 500 O HOH A 1481 O HOH A 1482 1.98 REMARK 500 NE ARG B 262 O HOH B 1056 2.03 REMARK 500 OD1 ASN B 333 O HOH B 820 2.06 REMARK 500 NE2 GLN C 207 OD1 ASP C 263 2.06 REMARK 500 O HOH C 602 O HOH C 1454 2.08 REMARK 500 NE2 GLN A 207 OD1 ASP A 263 2.08 REMARK 500 O HOH B 726 O HOH C 523 2.10 REMARK 500 CZ ARG A 44 O HOH A 763 2.11 REMARK 500 OE2 GLU B 349 O HOH B 577 2.12 REMARK 500 O HOH B 661 O HOH B 714 2.13 REMARK 500 O HOH D 801 O HOH D 975 2.14 REMARK 500 O HOH A 520 O HOH A 1380 2.14 REMARK 500 O HOH D 521 O HOH D 1440 2.14 REMARK 500 O4 PO4 D 500 O HOH D 1157 2.15 REMARK 500 NE2 GLN B 207 OD1 ASP B 263 2.16 REMARK 500 O2 PO4 C 509 O HOH C 1052 2.16 REMARK 500 NE2 GLN D 207 OD1 ASP D 263 2.17 REMARK 500 NH1 ARG A 262 O HOH A 1321 2.17 REMARK 500 OE2 GLU A 254 O HOH A 1255 2.17 REMARK 500 OE2 GLU C 254 O HOH C 735 2.17 REMARK 500 NE ARG A 262 O HOH A 1178 2.17 REMARK 500 OG SER C 345 O HOH C 534 2.18 REMARK 500 O HOH D 714 O HOH D 1469 2.18 REMARK 500 O HOH B 730 O HOH B 1097 2.18 REMARK 500 O HOH D 541 O HOH D 1450 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 433 CG - CD - NE ANGL. DEV. = -12.7 DEGREES REMARK 500 ARG A 433 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 433 NE - CZ - NH2 ANGL. DEV. = -7.1 DEGREES REMARK 500 GLY B 62 N - CA - C ANGL. DEV. = 16.7 DEGREES REMARK 500 LEU B 286 CA - CB - CG ANGL. DEV. = 17.6 DEGREES REMARK 500 LEU B 480 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 LEU C 286 CA - CB - CG ANGL. DEV. = 17.8 DEGREES REMARK 500 ARG C 433 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 PHE D 347 N - CA - C ANGL. DEV. = -19.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 19 -158.84 -152.83 REMARK 500 PHE A 75 -133.33 -119.39 REMARK 500 ALA A 124 -159.26 67.68 REMARK 500 ASP A 141 64.07 -100.47 REMARK 500 LEU A 156 -71.61 -103.73 REMARK 500 PRO A 201 134.03 -36.91 REMARK 500 GLU A 233 135.25 167.78 REMARK 500 GLU A 235 64.09 39.23 REMARK 500 ASP A 263 -62.21 -125.48 REMARK 500 LEU A 281 -89.86 71.71 REMARK 500 THR A 323 -72.01 -114.76 REMARK 500 HIS A 374 -0.41 80.88 REMARK 500 TRP A 381 -138.47 -83.48 REMARK 500 VAL A 394 -63.38 -104.75 REMARK 500 ARG A 395 137.06 -176.26 REMARK 500 GLN B 70 77.75 -118.27 REMARK 500 PHE B 75 -134.90 -114.96 REMARK 500 ALA B 124 -147.69 66.24 REMARK 500 PHE B 128 54.73 -94.35 REMARK 500 PRO B 182 144.44 -39.96 REMARK 500 ASN B 192 -164.89 -120.35 REMARK 500 GLU B 233 131.30 168.22 REMARK 500 ASP B 263 -68.11 -122.95 REMARK 500 LEU B 281 -82.40 78.04 REMARK 500 ALA B 320 -50.53 101.11 REMARK 500 THR B 323 -71.30 -112.05 REMARK 500 SER B 345 -142.36 40.05 REMARK 500 LYS B 346 71.45 25.78 REMARK 500 TRP B 348 -23.78 133.70 REMARK 500 HIS B 374 -4.42 87.02 REMARK 500 TRP B 381 -145.15 -78.08 REMARK 500 PHE C 75 -133.77 -118.02 REMARK 500 ALA C 124 -154.09 66.03 REMARK 500 ASP C 141 66.25 -114.31 REMARK 500 LEU C 156 -69.35 -103.67 REMARK 500 ASN C 192 -157.51 -131.43 REMARK 500 GLU C 233 133.86 166.40 REMARK 500 ASP C 263 -62.54 -123.14 REMARK 500 HIS C 273 30.30 -99.52 REMARK 500 LEU C 281 -81.74 70.32 REMARK 500 TYR C 313 -55.46 -29.82 REMARK 500 ALA C 318 117.71 -161.05 REMARK 500 LYS C 346 135.41 -39.58 REMARK 500 TRP C 381 -135.99 -80.32 REMARK 500 VAL C 394 -67.87 -106.12 REMARK 500 PHE C 397 -17.73 -140.92 REMARK 500 GLN D 70 78.86 -118.30 REMARK 500 PHE D 75 -136.65 -113.84 REMARK 500 ALA D 124 -149.96 66.08 REMARK 500 LEU D 156 -70.00 -114.35 REMARK 500 REMARK 500 THIS ENTRY HAS 62 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR B 61 GLY B 62 -146.36 REMARK 500 GLY B 344 SER B 345 33.68 REMARK 500 ARG B 496 GLN B 497 -126.35 REMARK 500 ARG D 496 GLN D 497 -122.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GXF RELATED DB: PDB REMARK 900 STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH ISOFAGOMINE AT NEUTRAL PH REMARK 900 RELATED ID: 3GXM RELATED DB: PDB REMARK 900 STRUCTURE OF ACID-BETA-GLUCOSIDASE AT PH 4.5 DBREF 3GXI A 1 497 UNP P04062 GLCM_HUMAN 40 536 DBREF 3GXI B 1 497 UNP P04062 GLCM_HUMAN 40 536 DBREF 3GXI C 1 497 UNP P04062 GLCM_HUMAN 40 536 DBREF 3GXI D 1 497 UNP P04062 GLCM_HUMAN 40 536 SEQADV 3GXI HIS A 495 UNP P04062 ARG 534 VARIANT SEQADV 3GXI HIS B 495 UNP P04062 ARG 534 VARIANT SEQADV 3GXI HIS C 495 UNP P04062 ARG 534 VARIANT SEQADV 3GXI HIS D 495 UNP P04062 ARG 534 VARIANT SEQRES 1 A 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER SEQRES 2 A 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE SEQRES 3 A 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG SEQRES 4 A 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER SEQRES 5 A 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU SEQRES 6 A 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL SEQRES 7 A 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU SEQRES 8 A 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU SEQRES 9 A 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN SEQRES 10 A 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE SEQRES 11 A 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN SEQRES 12 A 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU SEQRES 13 A 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN SEQRES 14 A 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO SEQRES 15 A 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY SEQRES 16 A 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR SEQRES 17 A 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA SEQRES 18 A 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN SEQRES 19 A 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN SEQRES 20 A 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE SEQRES 21 A 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS SEQRES 22 A 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU SEQRES 23 A 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO SEQRES 24 A 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP SEQRES 25 A 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY SEQRES 26 A 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA SEQRES 27 A 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER SEQRES 28 A 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER SEQRES 29 A 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY SEQRES 30 A 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY SEQRES 31 A 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE SEQRES 32 A 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET SEQRES 33 A 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU SEQRES 34 A 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN SEQRES 35 A 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER SEQRES 36 A 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL SEQRES 37 A 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU SEQRES 38 A 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP SEQRES 39 A 497 HIS ARG GLN SEQRES 1 B 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER SEQRES 2 B 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE SEQRES 3 B 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG SEQRES 4 B 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER SEQRES 5 B 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU SEQRES 6 B 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL SEQRES 7 B 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU SEQRES 8 B 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU SEQRES 9 B 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN SEQRES 10 B 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE SEQRES 11 B 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN SEQRES 12 B 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU SEQRES 13 B 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN SEQRES 14 B 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO SEQRES 15 B 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY SEQRES 16 B 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR SEQRES 17 B 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA SEQRES 18 B 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN SEQRES 19 B 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN SEQRES 20 B 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE SEQRES 21 B 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS SEQRES 22 B 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU SEQRES 23 B 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO SEQRES 24 B 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP SEQRES 25 B 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY SEQRES 26 B 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA SEQRES 27 B 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER SEQRES 28 B 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER SEQRES 29 B 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY SEQRES 30 B 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY SEQRES 31 B 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE SEQRES 32 B 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET SEQRES 33 B 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU SEQRES 34 B 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN SEQRES 35 B 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER SEQRES 36 B 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL SEQRES 37 B 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU SEQRES 38 B 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP SEQRES 39 B 497 HIS ARG GLN SEQRES 1 C 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER SEQRES 2 C 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE SEQRES 3 C 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG SEQRES 4 C 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER SEQRES 5 C 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU SEQRES 6 C 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL SEQRES 7 C 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU SEQRES 8 C 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU SEQRES 9 C 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN SEQRES 10 C 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE SEQRES 11 C 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN SEQRES 12 C 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU SEQRES 13 C 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN SEQRES 14 C 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO SEQRES 15 C 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY SEQRES 16 C 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR SEQRES 17 C 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA SEQRES 18 C 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN SEQRES 19 C 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN SEQRES 20 C 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE SEQRES 21 C 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS SEQRES 22 C 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU SEQRES 23 C 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO SEQRES 24 C 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP SEQRES 25 C 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY SEQRES 26 C 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA SEQRES 27 C 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER SEQRES 28 C 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER SEQRES 29 C 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY SEQRES 30 C 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY SEQRES 31 C 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE SEQRES 32 C 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET SEQRES 33 C 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU SEQRES 34 C 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN SEQRES 35 C 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER SEQRES 36 C 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL SEQRES 37 C 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU SEQRES 38 C 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP SEQRES 39 C 497 HIS ARG GLN SEQRES 1 D 497 ALA ARG PRO CYS ILE PRO LYS SER PHE GLY TYR SER SER SEQRES 2 D 497 VAL VAL CYS VAL CYS ASN ALA THR TYR CYS ASP SER PHE SEQRES 3 D 497 ASP PRO PRO THR PHE PRO ALA LEU GLY THR PHE SER ARG SEQRES 4 D 497 TYR GLU SER THR ARG SER GLY ARG ARG MET GLU LEU SER SEQRES 5 D 497 MET GLY PRO ILE GLN ALA ASN HIS THR GLY THR GLY LEU SEQRES 6 D 497 LEU LEU THR LEU GLN PRO GLU GLN LYS PHE GLN LYS VAL SEQRES 7 D 497 LYS GLY PHE GLY GLY ALA MET THR ASP ALA ALA ALA LEU SEQRES 8 D 497 ASN ILE LEU ALA LEU SER PRO PRO ALA GLN ASN LEU LEU SEQRES 9 D 497 LEU LYS SER TYR PHE SER GLU GLU GLY ILE GLY TYR ASN SEQRES 10 D 497 ILE ILE ARG VAL PRO MET ALA SER CYS ASP PHE SER ILE SEQRES 11 D 497 ARG THR TYR THR TYR ALA ASP THR PRO ASP ASP PHE GLN SEQRES 12 D 497 LEU HIS ASN PHE SER LEU PRO GLU GLU ASP THR LYS LEU SEQRES 13 D 497 LYS ILE PRO LEU ILE HIS ARG ALA LEU GLN LEU ALA GLN SEQRES 14 D 497 ARG PRO VAL SER LEU LEU ALA SER PRO TRP THR SER PRO SEQRES 15 D 497 THR TRP LEU LYS THR ASN GLY ALA VAL ASN GLY LYS GLY SEQRES 16 D 497 SER LEU LYS GLY GLN PRO GLY ASP ILE TYR HIS GLN THR SEQRES 17 D 497 TRP ALA ARG TYR PHE VAL LYS PHE LEU ASP ALA TYR ALA SEQRES 18 D 497 GLU HIS LYS LEU GLN PHE TRP ALA VAL THR ALA GLU ASN SEQRES 19 D 497 GLU PRO SER ALA GLY LEU LEU SER GLY TYR PRO PHE GLN SEQRES 20 D 497 CYS LEU GLY PHE THR PRO GLU HIS GLN ARG ASP PHE ILE SEQRES 21 D 497 ALA ARG ASP LEU GLY PRO THR LEU ALA ASN SER THR HIS SEQRES 22 D 497 HIS ASN VAL ARG LEU LEU MET LEU ASP ASP GLN ARG LEU SEQRES 23 D 497 LEU LEU PRO HIS TRP ALA LYS VAL VAL LEU THR ASP PRO SEQRES 24 D 497 GLU ALA ALA LYS TYR VAL HIS GLY ILE ALA VAL HIS TRP SEQRES 25 D 497 TYR LEU ASP PHE LEU ALA PRO ALA LYS ALA THR LEU GLY SEQRES 26 D 497 GLU THR HIS ARG LEU PHE PRO ASN THR MET LEU PHE ALA SEQRES 27 D 497 SER GLU ALA CYS VAL GLY SER LYS PHE TRP GLU GLN SER SEQRES 28 D 497 VAL ARG LEU GLY SER TRP ASP ARG GLY MET GLN TYR SER SEQRES 29 D 497 HIS SER ILE ILE THR ASN LEU LEU TYR HIS VAL VAL GLY SEQRES 30 D 497 TRP THR ASP TRP ASN LEU ALA LEU ASN PRO GLU GLY GLY SEQRES 31 D 497 PRO ASN TRP VAL ARG ASN PHE VAL ASP SER PRO ILE ILE SEQRES 32 D 497 VAL ASP ILE THR LYS ASP THR PHE TYR LYS GLN PRO MET SEQRES 33 D 497 PHE TYR HIS LEU GLY HIS PHE SER LYS PHE ILE PRO GLU SEQRES 34 D 497 GLY SER GLN ARG VAL GLY LEU VAL ALA SER GLN LYS ASN SEQRES 35 D 497 ASP LEU ASP ALA VAL ALA LEU MET HIS PRO ASP GLY SER SEQRES 36 D 497 ALA VAL VAL VAL VAL LEU ASN ARG SER SER LYS ASP VAL SEQRES 37 D 497 PRO LEU THR ILE LYS ASP PRO ALA VAL GLY PHE LEU GLU SEQRES 38 D 497 THR ILE SER PRO GLY TYR SER ILE HIS THR TYR LEU TRP SEQRES 39 D 497 HIS ARG GLN MODRES 3GXI ASN A 19 ASN GLYCOSYLATION SITE MODRES 3GXI ASN B 19 ASN GLYCOSYLATION SITE MODRES 3GXI ASN C 19 ASN GLYCOSYLATION SITE MODRES 3GXI ASN D 19 ASN GLYCOSYLATION SITE HET NAG A 498 14 HET PO4 A 499 5 HET PO4 A 500 5 HET PO4 A 501 5 HET PO4 A 502 5 HET PO4 A 503 5 HET PO4 A 504 5 HET PO4 A 505 5 HET PO4 A 506 5 HET PO4 A 507 5 HET PO4 A 508 5 HET PO4 A 509 5 HET PO4 A 510 5 HET PO4 A 511 5 HET PO4 A 512 5 HET PO4 A 513 5 HET PO4 A 514 5 HET PO4 A 515 5 HET PO4 A 516 5 HET PO4 A 517 5 HET NAG B 498 14 HET PO4 B 499 5 HET PO4 B 500 5 HET PO4 B 501 5 HET PO4 B 502 5 HET PO4 B 503 5 HET PO4 B 504 5 HET PO4 B 505 5 HET PO4 B 506 5 HET PO4 B 507 5 HET PO4 B 508 5 HET PO4 B 509 5 HET PO4 B 510 5 HET PO4 B 511 5 HET NAG C 498 14 HET PO4 C 499 5 HET PO4 C 500 5 HET PO4 C 501 5 HET PO4 C 502 5 HET PO4 C 503 5 HET PO4 C 504 5 HET PO4 C 505 5 HET PO4 C 506 5 HET PO4 C 507 5 HET PO4 C 508 5 HET PO4 C 509 5 HET PO4 C 510 5 HET PO4 C 511 5 HET PO4 C 512 5 HET PO4 C 513 5 HET PO4 C 514 5 HET PO4 C 515 5 HET NAG D 498 14 HET PO4 D 499 5 HET PO4 D 500 5 HET PO4 D 501 5 HET PO4 D 502 5 HET PO4 D 503 5 HET PO4 D 504 5 HET PO4 D 505 5 HET PO4 D 506 5 HET PO4 D 507 5 HET PO4 D 508 5 HET PO4 D 509 5 HET PO4 D 510 5 HET PO4 D 511 5 HET PO4 D 512 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM PO4 PHOSPHATE ION FORMUL 5 NAG 4(C8 H15 N O6) FORMUL 6 PO4 63(O4 P 3-) FORMUL 72 HOH *1679(H2 O) HELIX 1 1 THR A 86 ALA A 95 1 10 HELIX 2 2 SER A 97 SER A 110 1 14 HELIX 3 3 PRO A 150 LYS A 155 1 6 HELIX 4 4 LEU A 156 ALA A 168 1 13 HELIX 5 5 PRO A 182 LYS A 186 5 5 HELIX 6 6 ASP A 203 HIS A 223 1 21 HELIX 7 7 GLU A 235 LEU A 241 5 7 HELIX 8 8 THR A 252 ASP A 263 1 12 HELIX 9 9 ASP A 263 ASN A 270 1 8 HELIX 10 10 LEU A 286 LEU A 288 5 3 HELIX 11 11 PRO A 289 THR A 297 1 9 HELIX 12 12 ASP A 298 LYS A 303 1 6 HELIX 13 13 LEU A 314 ALA A 318 5 5 HELIX 14 14 PRO A 319 PHE A 331 1 13 HELIX 15 15 SER A 356 TYR A 373 1 18 HELIX 16 16 GLN A 414 LYS A 425 1 12 HELIX 17 17 THR B 86 ALA B 95 1 10 HELIX 18 18 SER B 97 SER B 110 1 14 HELIX 19 19 PRO B 150 LYS B 155 1 6 HELIX 20 20 LEU B 156 ALA B 168 1 13 HELIX 21 21 PRO B 182 LYS B 186 5 5 HELIX 22 22 ASP B 203 HIS B 223 1 21 HELIX 23 23 GLU B 235 LEU B 241 5 7 HELIX 24 24 THR B 252 ASP B 263 1 12 HELIX 25 25 ASP B 263 ASN B 270 1 8 HELIX 26 26 LEU B 286 LEU B 288 5 3 HELIX 27 27 PRO B 289 THR B 297 1 9 HELIX 28 28 ASP B 298 LYS B 303 1 6 HELIX 29 29 THR B 323 PHE B 331 1 9 HELIX 30 30 SER B 356 TYR B 373 1 18 HELIX 31 31 ILE B 406 ASP B 409 5 4 HELIX 32 32 GLN B 414 LYS B 425 1 12 HELIX 33 33 THR C 86 ALA C 95 1 10 HELIX 34 34 SER C 97 SER C 110 1 14 HELIX 35 35 PRO C 150 LYS C 155 1 6 HELIX 36 36 LEU C 156 ALA C 168 1 13 HELIX 37 37 PRO C 182 LYS C 186 5 5 HELIX 38 38 ASP C 203 HIS C 223 1 21 HELIX 39 39 GLU C 235 LEU C 241 5 7 HELIX 40 40 THR C 252 ASP C 263 1 12 HELIX 41 41 ASP C 263 SER C 271 1 9 HELIX 42 42 LEU C 286 LEU C 288 5 3 HELIX 43 43 PRO C 289 THR C 297 1 9 HELIX 44 44 ASP C 298 LYS C 303 1 6 HELIX 45 45 LEU C 314 ALA C 318 5 5 HELIX 46 46 PRO C 319 PHE C 331 1 13 HELIX 47 47 SER C 356 TYR C 373 1 18 HELIX 48 48 GLN C 414 LYS C 425 1 12 HELIX 49 49 THR D 86 ALA D 95 1 10 HELIX 50 50 SER D 97 SER D 110 1 14 HELIX 51 51 PRO D 150 LYS D 155 1 6 HELIX 52 52 LEU D 156 ALA D 168 1 13 HELIX 53 53 PRO D 182 LYS D 186 5 5 HELIX 54 54 ASP D 203 HIS D 223 1 21 HELIX 55 55 GLU D 235 LEU D 241 5 7 HELIX 56 56 THR D 252 ASP D 263 1 12 HELIX 57 57 ASP D 263 ASN D 270 1 8 HELIX 58 58 LEU D 286 LEU D 288 5 3 HELIX 59 59 PRO D 289 THR D 297 1 9 HELIX 60 60 ASP D 298 LYS D 303 1 6 HELIX 61 61 THR D 323 PHE D 331 1 9 HELIX 62 62 SER D 356 TYR D 373 1 18 HELIX 63 63 ILE D 406 ASP D 409 5 4 HELIX 64 64 GLN D 414 LYS D 425 1 12 SHEET 1 A 4 PRO A 6 LYS A 7 0 SHEET 2 A 4 VAL A 15 CYS A 18 -1 O VAL A 15 N LYS A 7 SHEET 3 A 4 THR A 410 LYS A 413 -1 O PHE A 411 N CYS A 18 SHEET 4 A 4 ILE A 402 ASP A 405 -1 N ASP A 405 O THR A 410 SHEET 1 B 9 GLU A 50 PRO A 55 0 SHEET 2 B 9 THR A 36 THR A 43 -1 N ARG A 39 O SER A 52 SHEET 3 B 9 SER A 488 TRP A 494 -1 O THR A 491 N TYR A 40 SHEET 4 B 9 ALA A 456 ASN A 462 -1 N VAL A 458 O TYR A 492 SHEET 5 B 9 ASP A 445 MET A 450 -1 N ASP A 445 O LEU A 461 SHEET 6 B 9 GLN A 432 ALA A 438 -1 N GLN A 432 O MET A 450 SHEET 7 B 9 LEU A 65 LYS A 77 -1 N PHE A 75 O ARG A 433 SHEET 8 B 9 VAL A 468 ASP A 474 1 O LYS A 473 N LEU A 69 SHEET 9 B 9 GLY A 478 SER A 484 -1 O LEU A 480 N ILE A 472 SHEET 1 C 9 GLY A 80 ALA A 84 0 SHEET 2 C 9 ILE A 118 MET A 123 1 O ARG A 120 N GLY A 83 SHEET 3 C 9 SER A 173 PRO A 178 1 O LEU A 175 N VAL A 121 SHEET 4 C 9 ALA A 229 THR A 231 1 O THR A 231 N ALA A 176 SHEET 5 C 9 ARG A 277 GLN A 284 1 O LEU A 279 N VAL A 230 SHEET 6 C 9 GLY A 307 HIS A 311 1 O ALA A 309 N MET A 280 SHEET 7 C 9 MET A 335 ALA A 341 1 O PHE A 337 N VAL A 310 SHEET 8 C 9 VAL A 375 ASN A 382 1 O THR A 379 N ALA A 341 SHEET 9 C 9 GLY A 80 ALA A 84 1 N GLY A 82 O ASP A 380 SHEET 1 D 4 PRO B 6 LYS B 7 0 SHEET 2 D 4 VAL B 15 CYS B 18 -1 O VAL B 15 N LYS B 7 SHEET 3 D 4 THR B 410 LYS B 413 -1 O PHE B 411 N CYS B 18 SHEET 4 D 4 ILE B 402 ASP B 405 -1 N ASP B 405 O THR B 410 SHEET 1 E 9 GLU B 50 PRO B 55 0 SHEET 2 E 9 THR B 36 THR B 43 -1 N ARG B 39 O SER B 52 SHEET 3 E 9 SER B 488 TRP B 494 -1 O LEU B 493 N SER B 38 SHEET 4 E 9 ALA B 456 ASN B 462 -1 N ALA B 456 O TRP B 494 SHEET 5 E 9 LEU B 444 MET B 450 -1 N ASP B 445 O LEU B 461 SHEET 6 E 9 GLN B 432 ALA B 438 -1 N GLN B 432 O MET B 450 SHEET 7 E 9 LEU B 65 LYS B 77 -1 N PHE B 75 O ARG B 433 SHEET 8 E 9 VAL B 468 ASP B 474 1 O THR B 471 N LEU B 67 SHEET 9 E 9 GLY B 478 SER B 484 -1 O GLY B 478 N ASP B 474 SHEET 1 F 9 GLY B 80 ALA B 84 0 SHEET 2 F 9 ILE B 118 MET B 123 1 O ARG B 120 N GLY B 83 SHEET 3 F 9 SER B 173 PRO B 178 1 O LEU B 175 N VAL B 121 SHEET 4 F 9 ALA B 229 THR B 231 1 O THR B 231 N ALA B 176 SHEET 5 F 9 ARG B 277 GLN B 284 1 O LEU B 279 N VAL B 230 SHEET 6 F 9 GLY B 307 TYR B 313 1 O ALA B 309 N MET B 280 SHEET 7 F 9 MET B 335 CYS B 342 1 O MET B 335 N ILE B 308 SHEET 8 F 9 VAL B 375 ASN B 382 1 O VAL B 376 N LEU B 336 SHEET 9 F 9 GLY B 80 ALA B 84 1 N GLY B 82 O ASP B 380 SHEET 1 G 4 PRO C 6 LYS C 7 0 SHEET 2 G 4 VAL C 15 CYS C 18 -1 O VAL C 15 N LYS C 7 SHEET 3 G 4 THR C 410 LYS C 413 -1 O PHE C 411 N CYS C 18 SHEET 4 G 4 ILE C 402 ASP C 405 -1 N ILE C 403 O TYR C 412 SHEET 1 H 9 GLU C 50 PRO C 55 0 SHEET 2 H 9 THR C 36 THR C 43 -1 N ARG C 39 O SER C 52 SHEET 3 H 9 SER C 488 TRP C 494 -1 O THR C 491 N TYR C 40 SHEET 4 H 9 ALA C 456 ASN C 462 -1 N VAL C 458 O TYR C 492 SHEET 5 H 9 ASP C 445 MET C 450 -1 N ASP C 445 O LEU C 461 SHEET 6 H 9 GLN C 432 ALA C 438 -1 N GLN C 432 O MET C 450 SHEET 7 H 9 LEU C 65 LYS C 77 -1 N PHE C 75 O ARG C 433 SHEET 8 H 9 VAL C 468 ASP C 474 1 O LYS C 473 N LEU C 69 SHEET 9 H 9 GLY C 478 SER C 484 -1 O LEU C 480 N ILE C 472 SHEET 1 I 9 GLY C 80 ALA C 84 0 SHEET 2 I 9 ILE C 118 MET C 123 1 O ARG C 120 N GLY C 83 SHEET 3 I 9 SER C 173 PRO C 178 1 O LEU C 175 N VAL C 121 SHEET 4 I 9 ALA C 229 THR C 231 1 O THR C 231 N ALA C 176 SHEET 5 I 9 ARG C 277 GLN C 284 1 O ARG C 277 N VAL C 230 SHEET 6 I 9 GLY C 307 HIS C 311 1 O ALA C 309 N MET C 280 SHEET 7 I 9 MET C 335 GLU C 340 1 O PHE C 337 N VAL C 310 SHEET 8 I 9 VAL C 375 ASN C 382 1 O VAL C 376 N LEU C 336 SHEET 9 I 9 GLY C 80 ALA C 84 1 N GLY C 82 O ASP C 380 SHEET 1 J 4 PRO D 6 LYS D 7 0 SHEET 2 J 4 VAL D 15 CYS D 18 -1 O VAL D 15 N LYS D 7 SHEET 3 J 4 THR D 410 LYS D 413 -1 O PHE D 411 N CYS D 18 SHEET 4 J 4 ILE D 402 ASP D 405 -1 N ASP D 405 O THR D 410 SHEET 1 K 9 GLU D 50 PRO D 55 0 SHEET 2 K 9 THR D 36 THR D 43 -1 N ARG D 39 O SER D 52 SHEET 3 K 9 SER D 488 TRP D 494 -1 O LEU D 493 N SER D 38 SHEET 4 K 9 ALA D 456 ASN D 462 -1 N ALA D 456 O TRP D 494 SHEET 5 K 9 LEU D 444 MET D 450 -1 N ASP D 445 O LEU D 461 SHEET 6 K 9 GLN D 432 ALA D 438 -1 N GLN D 432 O MET D 450 SHEET 7 K 9 LEU D 65 LYS D 77 -1 N PHE D 75 O ARG D 433 SHEET 8 K 9 VAL D 468 ASP D 474 1 O LYS D 473 N LEU D 69 SHEET 9 K 9 GLY D 478 SER D 484 -1 O GLY D 478 N ASP D 474 SHEET 1 L 9 GLY D 80 ALA D 84 0 SHEET 2 L 9 ILE D 118 MET D 123 1 O ARG D 120 N GLY D 83 SHEET 3 L 9 SER D 173 PRO D 178 1 O LEU D 175 N VAL D 121 SHEET 4 L 9 ALA D 229 THR D 231 1 O THR D 231 N ALA D 176 SHEET 5 L 9 ARG D 277 GLN D 284 1 O LEU D 279 N VAL D 230 SHEET 6 L 9 GLY D 307 TYR D 313 1 O ALA D 309 N MET D 280 SHEET 7 L 9 MET D 335 CYS D 342 1 O PHE D 337 N VAL D 310 SHEET 8 L 9 VAL D 375 ASN D 382 1 O VAL D 376 N LEU D 336 SHEET 9 L 9 GLY D 80 ALA D 84 1 N GLY D 82 O ASP D 380 SSBOND 1 CYS A 4 CYS A 16 1555 1555 2.04 SSBOND 2 CYS A 18 CYS A 23 1555 1555 2.05 SSBOND 3 CYS B 4 CYS B 16 1555 1555 2.04 SSBOND 4 CYS B 18 CYS B 23 1555 1555 2.06 SSBOND 5 CYS C 4 CYS C 16 1555 1555 2.04 SSBOND 6 CYS C 18 CYS C 23 1555 1555 2.05 SSBOND 7 CYS D 4 CYS D 16 1555 1555 2.05 SSBOND 8 CYS D 18 CYS D 23 1555 1555 2.06 LINK ND2 ASN A 19 C1 NAG A 498 1555 1555 1.45 LINK ND2 ASN B 19 C1 NAG B 498 1555 1555 1.45 LINK ND2 ASN C 19 C1 NAG C 498 1555 1555 1.45 LINK ND2 ASN D 19 C1 NAG D 498 1555 1555 1.46 CISPEP 1 LEU A 288 PRO A 289 0 0.12 CISPEP 2 GLY A 390 PRO A 391 0 0.70 CISPEP 3 LEU B 288 PRO B 289 0 -0.31 CISPEP 4 GLY B 390 PRO B 391 0 2.62 CISPEP 5 LEU C 288 PRO C 289 0 -0.88 CISPEP 6 VAL C 343 GLY C 344 0 9.94 CISPEP 7 GLY C 390 PRO C 391 0 0.96 CISPEP 8 LEU D 288 PRO D 289 0 -1.79 CISPEP 9 ALA D 318 PRO D 319 0 -22.93 CISPEP 10 SER D 345 LYS D 346 0 -27.35 CISPEP 11 LYS D 346 PHE D 347 0 23.49 CISPEP 12 GLY D 390 PRO D 391 0 3.96 CRYST1 110.050 91.713 152.283 90.00 111.13 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009087 0.000000 0.003512 0.00000 SCALE2 0.000000 0.010904 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007040 0.00000