PDB Short entry for 3HK2 HEADER NUCLEIC ACID BINDING PROTEIN/DNA/RNA 22-MAY-09 3HK2 TITLE CRYSTAL STRUCTURE OF T. THERMOPHILUS ARGONAUTE N478 MUTANT PROTEIN TITLE 2 COMPLEXED WITH DNA GUIDE STRAND AND 19-NT RNA TARGET STRAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGONAUTE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*T COMPND 8 P*AP*GP*T)-3'; COMPND 9 CHAIN: C, E; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: 5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP COMPND 13 *G)-3'; COMPND 14 CHAIN: F, D; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 262724; SOURCE 4 STRAIN: HB27; SOURCE 5 GENE: TT_P0026; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-SUMO; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES KEYWDS ARGONAUTE, PROTEIN-DNA-RNA COMPLEX, NUCLEIC ACID BINDING PROTEIN-DNA- KEYWDS 2 RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.WANG,H.LI,G.SHENG,D.J.PATEL REVDAT 5 06-SEP-23 3HK2 1 REMARK REVDAT 4 13-OCT-21 3HK2 1 REMARK SEQADV REVDAT 3 13-JUL-11 3HK2 1 VERSN REVDAT 2 20-OCT-09 3HK2 1 JRNL REVDAT 1 06-OCT-09 3HK2 0 JRNL AUTH Y.WANG,S.JURANEK,H.LI,G.SHENG,G.S.WARDLE,T.TUSCHL,D.J.PATEL JRNL TITL NUCLEATION, PROPAGATION AND CLEAVAGE OF TARGET RNAS IN AGO JRNL TITL 2 SILENCING COMPLEXES. JRNL REF NATURE V. 461 754 2009 JRNL REFN ISSN 0028-0836 JRNL PMID 19812667 JRNL DOI 10.1038/NATURE08434 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.070 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 50206 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2548 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7880 - 7.3260 0.99 2982 181 0.2070 0.2250 REMARK 3 2 7.3260 - 5.8180 1.00 2900 153 0.2050 0.2370 REMARK 3 3 5.8180 - 5.0840 0.99 2848 152 0.1810 0.2290 REMARK 3 4 5.0840 - 4.6190 0.99 2829 150 0.1570 0.1830 REMARK 3 5 4.6190 - 4.2880 0.98 2828 136 0.1460 0.1740 REMARK 3 6 4.2880 - 4.0360 0.98 2790 153 0.1590 0.1880 REMARK 3 7 4.0360 - 3.8340 0.97 2730 145 0.1770 0.2150 REMARK 3 8 3.8340 - 3.6670 0.96 2720 155 0.1970 0.2400 REMARK 3 9 3.6670 - 3.5260 0.96 2730 136 0.2070 0.2630 REMARK 3 10 3.5260 - 3.4040 0.95 2673 131 0.2120 0.2510 REMARK 3 11 3.4040 - 3.2980 0.95 2670 151 0.2350 0.2900 REMARK 3 12 3.2980 - 3.2040 0.93 2620 154 0.2350 0.3040 REMARK 3 13 3.2040 - 3.1190 0.91 2537 148 0.2480 0.3110 REMARK 3 14 3.1190 - 3.0430 0.90 2519 130 0.2630 0.3050 REMARK 3 15 3.0430 - 2.9740 0.86 2431 106 0.2890 0.3150 REMARK 3 16 2.9740 - 2.9110 0.85 2354 125 0.2710 0.2780 REMARK 3 17 2.9110 - 2.8520 0.82 2286 118 0.2900 0.3190 REMARK 3 18 2.8520 - 2.8000 0.79 2211 124 0.2920 0.3290 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 51.81 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 71.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.78800 REMARK 3 B22 (A**2) : 6.35900 REMARK 3 B33 (A**2) : -12.14700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 11465 REMARK 3 ANGLE : 1.242 15880 REMARK 3 CHIRALITY : 0.075 1817 REMARK 3 PLANARITY : 0.006 1861 REMARK 3 DIHEDRAL : 19.285 4246 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 4:40 OR RESSEQ 42:83 REMARK 3 OR RESSEQ 85:215 OR RESSEQ 222:242 OR REMARK 3 RESSEQ 244:268 OR RESSEQ 281:366 OR REMARK 3 RESSEQ 368:465 OR RESSEQ 467:605 OR REMARK 3 RESSEQ 611:685 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 4:40 OR RESSEQ 42:83 REMARK 3 OR RESSEQ 85:215 OR RESSEQ 222:242 OR REMARK 3 RESSEQ 244:268 OR RESSEQ 281:366 OR REMARK 3 RESSEQ 368:465 OR RESSEQ 467:605 OR REMARK 3 RESSEQ 611:685 ) REMARK 3 ATOM PAIRS NUMBER : 4818 REMARK 3 RMSD : 0.024 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HK2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053229. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53789 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 30.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.48700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3DLH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M SUCCINIC ACID, 0.1 M HEPES, PH REMARK 280 7.0, 1% (W/V) POLYETHYLENE GLYCOL MONOMETHYL ETHER 2,000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 308 K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 55.59650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.16950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.44200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 87.16950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 55.59650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.44200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 HIS A 3 REMARK 465 GLY A 219 REMARK 465 GLY A 220 REMARK 465 LEU A 221 REMARK 465 ASP A 269 REMARK 465 LEU A 270 REMARK 465 HIS A 271 REMARK 465 GLU A 272 REMARK 465 GLU A 273 REMARK 465 GLU A 274 REMARK 465 GLY A 275 REMARK 465 SER A 276 REMARK 465 LEU A 277 REMARK 465 ALA A 278 REMARK 465 LEU A 279 REMARK 465 SER A 280 REMARK 465 ARG A 608 REMARK 465 ASP A 609 REMARK 465 PHE A 610 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 HIS B 3 REMARK 465 GLY B 219 REMARK 465 GLY B 220 REMARK 465 LEU B 221 REMARK 465 ASP B 269 REMARK 465 LEU B 270 REMARK 465 HIS B 271 REMARK 465 GLU B 272 REMARK 465 GLU B 273 REMARK 465 GLU B 274 REMARK 465 GLY B 275 REMARK 465 SER B 276 REMARK 465 LEU B 277 REMARK 465 ALA B 278 REMARK 465 LEU B 279 REMARK 465 ASP B 609 REMARK 465 PHE B 610 REMARK 465 DT C 18 REMARK 465 DA C 19 REMARK 465 DG C 20 REMARK 465 DT C 21 REMARK 465 DT E 18 REMARK 465 DA E 19 REMARK 465 DG E 20 REMARK 465 DT E 21 REMARK 465 U F 1 REMARK 465 A F 2 REMARK 465 U F 3 REMARK 465 G F 19 REMARK 465 U D 1 REMARK 465 A D 2 REMARK 465 U D 3 REMARK 465 G D 19 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 4 CG CD1 CD2 REMARK 470 ASP A 34 CG OD1 OD2 REMARK 470 PRO A 35 CG CD REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 GLU A 41 CG CD OE1 OE2 REMARK 470 ARG A 81 CG CD NE CZ NH1 NH2 REMARK 470 MET A 82 CG SD CE REMARK 470 GLN A 84 CG CD OE1 NE2 REMARK 470 SER A 107 OG REMARK 470 VAL A 127 CG1 CG2 REMARK 470 TRP A 128 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 128 CZ3 CH2 REMARK 470 GLU A 130 CG CD OE1 OE2 REMARK 470 LEU A 132 CG CD1 CD2 REMARK 470 ARG A 136 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 137 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 138 CG CD OE1 OE2 REMARK 470 ARG A 141 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 143 CG CD REMARK 470 TRP A 145 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 145 CZ3 CH2 REMARK 470 ARG A 146 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 173 CG1 CG2 CD1 REMARK 470 LEU A 174 CG CD1 CD2 REMARK 470 GLU A 176 CG CD OE1 OE2 REMARK 470 MET A 177 CG SD CE REMARK 470 LEU A 179 CG CD1 CD2 REMARK 470 GLU A 180 CG CD OE1 OE2 REMARK 470 TRP A 182 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 182 CZ3 CH2 REMARK 470 LEU A 183 CG CD1 CD2 REMARK 470 GLN A 185 CG CD OE1 NE2 REMARK 470 HIS A 187 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 189 CG CD1 CD2 REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 ARG A 192 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 194 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 198 CG OD1 OD2 REMARK 470 ARG A 199 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 200 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 203 CG CD OE1 OE2 REMARK 470 GLU A 209 CG CD OE1 OE2 REMARK 470 GLU A 210 CG CD OE1 OE2 REMARK 470 PRO A 212 CG CD REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 GLU A 214 CG CD OE1 OE2 REMARK 470 LEU A 215 CG CD1 CD2 REMARK 470 PRO A 218 CG CD REMARK 470 SER A 222 OG REMARK 470 LEU A 223 CG CD1 CD2 REMARK 470 LEU A 224 CG CD1 CD2 REMARK 470 ASP A 225 CG OD1 OD2 REMARK 470 TYR A 226 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS A 227 CG ND1 CD2 CE1 NE2 REMARK 470 SER A 229 OG REMARK 470 LYS A 230 CG CD CE NZ REMARK 470 ARG A 232 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 233 CG CD1 CD2 REMARK 470 GLN A 234 CG CD OE1 NE2 REMARK 470 ARG A 236 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 237 CG CD OE1 OE2 REMARK 470 ARG A 240 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 241 CG1 CG2 REMARK 470 TRP A 243 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 243 CZ3 CH2 REMARK 470 PRO A 247 CG CD REMARK 470 LYS A 248 CG CD CE NZ REMARK 470 ASP A 249 CG OD1 OD2 REMARK 470 PRO A 250 CG CD REMARK 470 ARG A 251 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 252 CG CD CE NZ REMARK 470 LEU A 257 CG CD1 CD2 REMARK 470 LEU A 260 CG CD1 CD2 REMARK 470 VAL A 264 CG1 CG2 REMARK 470 LEU A 265 CG CD1 CD2 REMARK 470 THR A 266 OG1 CG2 REMARK 470 LEU A 267 CG CD1 CD2 REMARK 470 GLU A 268 CG CD OE1 OE2 REMARK 470 LEU A 281 CG CD1 CD2 REMARK 470 PRO A 282 CG CD REMARK 470 GLU A 284 CG CD OE1 OE2 REMARK 470 ILE A 297 CG1 CG2 CD1 REMARK 470 ARG A 310 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 315 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 320 CG CD CE NZ REMARK 470 ARG A 325 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 342 CG CD OE1 NE2 REMARK 470 ARG A 367 CG CD NE CZ NH1 NH2 REMARK 470 SER A 386 OG REMARK 470 ARG A 440 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 444 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 482 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 483 CG CD OE1 OE2 REMARK 470 GLN A 585 CG CD OE1 NE2 REMARK 470 ARG A 587 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 588 CG CD1 CD2 REMARK 470 VAL A 606 CG1 CG2 REMARK 470 HIS A 607 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 611 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 4 CG CD1 CD2 REMARK 470 ASP B 34 CG OD1 OD2 REMARK 470 PRO B 35 CG CD REMARK 470 GLU B 40 CG CD OE1 OE2 REMARK 470 ARG B 81 CG CD NE CZ NH1 NH2 REMARK 470 MET B 82 CG SD CE REMARK 470 SER B 107 OG REMARK 470 VAL B 127 CG1 CG2 REMARK 470 TRP B 128 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 128 CZ3 CH2 REMARK 470 GLU B 130 CG CD OE1 OE2 REMARK 470 LEU B 132 CG CD1 CD2 REMARK 470 ARG B 136 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 137 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 138 CG CD OE1 OE2 REMARK 470 ARG B 141 CG CD NE CZ NH1 NH2 REMARK 470 PRO B 143 CG CD REMARK 470 TRP B 145 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 145 CZ3 CH2 REMARK 470 ARG B 146 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 173 CG1 CG2 CD1 REMARK 470 LEU B 174 CG CD1 CD2 REMARK 470 GLU B 176 CG CD OE1 OE2 REMARK 470 MET B 177 CG SD CE REMARK 470 LEU B 179 CG CD1 CD2 REMARK 470 GLU B 180 CG CD OE1 OE2 REMARK 470 TRP B 182 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 182 CZ3 CH2 REMARK 470 LEU B 183 CG CD1 CD2 REMARK 470 GLN B 185 CG CD OE1 NE2 REMARK 470 HIS B 187 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 189 CG CD1 CD2 REMARK 470 LYS B 191 CG CD CE NZ REMARK 470 ARG B 192 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 194 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 198 CG OD1 OD2 REMARK 470 ARG B 199 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 200 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 203 CG CD OE1 OE2 REMARK 470 GLU B 209 CG CD OE1 OE2 REMARK 470 GLU B 210 CG CD OE1 OE2 REMARK 470 PRO B 212 CG CD REMARK 470 LYS B 213 CG CD CE NZ REMARK 470 GLU B 214 CG CD OE1 OE2 REMARK 470 LEU B 215 CG CD1 CD2 REMARK 470 PRO B 216 CG CD REMARK 470 PRO B 218 CG CD REMARK 470 SER B 222 OG REMARK 470 LEU B 223 CG CD1 CD2 REMARK 470 LEU B 224 CG CD1 CD2 REMARK 470 ASP B 225 CG OD1 OD2 REMARK 470 TYR B 226 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS B 227 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 229 OG REMARK 470 LYS B 230 CG CD CE NZ REMARK 470 ARG B 232 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 233 CG CD1 CD2 REMARK 470 GLN B 234 CG CD OE1 NE2 REMARK 470 ARG B 236 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 237 CG CD OE1 OE2 REMARK 470 ARG B 240 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 241 CG1 CG2 REMARK 470 PRO B 247 CG CD REMARK 470 LYS B 248 CG CD CE NZ REMARK 470 ASP B 249 CG OD1 OD2 REMARK 470 PRO B 250 CG CD REMARK 470 ARG B 251 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 252 CG CD CE NZ REMARK 470 LEU B 257 CG CD1 CD2 REMARK 470 LEU B 260 CG CD1 CD2 REMARK 470 VAL B 264 CG1 CG2 REMARK 470 LEU B 265 CG CD1 CD2 REMARK 470 THR B 266 OG1 CG2 REMARK 470 LEU B 267 CG CD1 CD2 REMARK 470 GLU B 268 CG CD OE1 OE2 REMARK 470 SER B 280 OG REMARK 470 LEU B 281 CG CD1 CD2 REMARK 470 PRO B 282 CG CD REMARK 470 GLU B 284 CG CD OE1 OE2 REMARK 470 ILE B 297 CG1 CG2 CD1 REMARK 470 ARG B 310 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 315 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 320 CG CD CE NZ REMARK 470 ARG B 325 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 342 CG CD OE1 NE2 REMARK 470 SER B 386 OG REMARK 470 ARG B 440 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 444 CG CD NE CZ NH1 NH2 REMARK 470 SER B 466 OG REMARK 470 ARG B 482 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 483 CG CD OE1 OE2 REMARK 470 GLN B 585 CG CD OE1 NE2 REMARK 470 ARG B 587 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 588 CG CD1 CD2 REMARK 470 HIS B 607 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 608 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 611 CG CD NE CZ NH1 NH2 REMARK 470 DA C 17 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DA C 17 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA C 17 C2 N3 C4 REMARK 470 DA E 17 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DA E 17 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA E 17 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA A 464 C LEU A 465 N -0.196 REMARK 500 DT C 1 P DT C 1 OP3 -0.129 REMARK 500 DT E 1 P DT E 1 OP3 -0.130 REMARK 500 DG E 2 O3' DG E 2 C3' -0.036 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 143 N - CA - CB ANGL. DEV. = 7.3 DEGREES REMARK 500 PRO A 247 N - CA - CB ANGL. DEV. = 7.5 DEGREES REMARK 500 PRO A 438 C - N - CA ANGL. DEV. = -10.1 DEGREES REMARK 500 ALA A 464 O - C - N ANGL. DEV. = -9.9 DEGREES REMARK 500 PRO B 143 N - CA - CB ANGL. DEV. = 7.3 DEGREES REMARK 500 PRO B 216 N - CA - CB ANGL. DEV. = 7.3 DEGREES REMARK 500 PRO B 218 N - CA - CB ANGL. DEV. = 7.5 DEGREES REMARK 500 PRO B 247 N - CA - CB ANGL. DEV. = 7.5 DEGREES REMARK 500 PRO B 438 C - N - CA ANGL. DEV. = -10.1 DEGREES REMARK 500 DG C 4 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DT C 6 C4' - C3' - C2' ANGL. DEV. = -4.6 DEGREES REMARK 500 DT C 6 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DG C 8 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT C 9 N3 - C4 - O4 ANGL. DEV. = 3.8 DEGREES REMARK 500 DG C 11 O4' - C1' - N9 ANGL. DEV. = 6.0 DEGREES REMARK 500 DT C 16 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DG E 2 O5' - C5' - C4' ANGL. DEV. = -6.2 DEGREES REMARK 500 DG E 2 O4' - C4' - C3' ANGL. DEV. = -3.2 DEGREES REMARK 500 DG E 4 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT E 6 O4' - C4' - C3' ANGL. DEV. = -2.8 DEGREES REMARK 500 DT E 6 C4' - C3' - C2' ANGL. DEV. = -4.8 DEGREES REMARK 500 DT E 6 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DG E 8 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT E 9 N3 - C4 - O4 ANGL. DEV. = 3.8 DEGREES REMARK 500 DG E 11 O4' - C1' - N9 ANGL. DEV. = 5.5 DEGREES REMARK 500 DT E 16 C3' - O3' - P ANGL. DEV. = 7.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 12 36.55 -71.92 REMARK 500 ARG A 25 74.60 -168.07 REMARK 500 ASP A 34 -81.81 -73.48 REMARK 500 PRO A 35 93.82 -54.38 REMARK 500 PRO A 36 126.90 -33.15 REMARK 500 LEU A 132 31.45 -84.45 REMARK 500 ARG A 136 -86.63 -91.78 REMARK 500 PRO A 169 151.76 -48.77 REMARK 500 LEU A 204 106.06 -45.71 REMARK 500 TRP A 243 105.97 -58.75 REMARK 500 THR A 266 -75.86 -143.50 REMARK 500 ARG A 288 -72.69 -51.86 REMARK 500 ARG A 340 87.16 -151.79 REMARK 500 GLN A 355 -75.15 -98.95 REMARK 500 PRO A 438 94.07 -59.75 REMARK 500 ASP A 497 -22.64 -34.48 REMARK 500 GLN A 551 118.34 -29.88 REMARK 500 PRO A 595 159.50 -46.88 REMARK 500 LEU A 596 -147.96 -146.24 REMARK 500 LEU A 669 23.18 -146.27 REMARK 500 ASN B 12 37.19 -72.97 REMARK 500 ARG B 25 77.62 -167.32 REMARK 500 ASP B 34 -81.82 -73.52 REMARK 500 PRO B 35 92.64 -54.37 REMARK 500 PRO B 36 125.43 -30.94 REMARK 500 ARG B 115 -71.48 -45.71 REMARK 500 LEU B 116 -60.80 -29.76 REMARK 500 LEU B 132 31.29 -84.06 REMARK 500 ARG B 136 -86.85 -91.49 REMARK 500 PRO B 169 151.63 -49.58 REMARK 500 LEU B 205 -60.43 -93.96 REMARK 500 THR B 266 -76.01 -143.70 REMARK 500 ARG B 288 -72.91 -51.55 REMARK 500 ARG B 340 87.51 -152.08 REMARK 500 GLN B 355 -75.53 -97.91 REMARK 500 PRO B 438 94.04 -59.64 REMARK 500 ASP B 497 -22.75 -34.48 REMARK 500 GLN B 551 118.35 -29.19 REMARK 500 PRO B 595 159.45 -47.64 REMARK 500 LEU B 596 -147.19 -145.18 REMARK 500 HIS B 607 -0.49 -148.01 REMARK 500 ALA B 648 146.02 -170.09 REMARK 500 LEU B 669 23.43 -147.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 498 GLY A 499 -148.77 REMARK 500 GLY B 498 GLY B 499 -148.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 22 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 686 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 22 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 686 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HGE RELATED DB: PDB REMARK 900 DIFFERENT MUTANT PROTEIN COMPLEXED WITH SAME DNA GUIDE AND 20-NT REMARK 900 RNA TAGET CONTAINING ONE NUCLEIC ACID BULGE REMARK 900 RELATED ID: 3HJF RELATED DB: PDB REMARK 900 DIFFERENT MUTANT PROTEIN COMPLEXED WITH SAME DNA GUIDE AND 15-NT REMARK 900 RNA GUIDE REMARK 900 RELATED ID: 3DLB RELATED DB: PDB REMARK 900 WILD TYPE PROTEIN COMPLEXED WITH 10-NT DNA GUIDE STRAND REMARK 900 RELATED ID: 3DLH RELATED DB: PDB REMARK 900 WILD TYPE PROTEIN COMPLEXED WITH SAME DNA GUIDE STRAND REMARK 900 RELATED ID: 3F73 RELATED DB: PDB REMARK 900 WILD TYPE PROTEIN COMPLEXED WITH SAME DNA GUIDE STRAND AND 20-NT REMARK 900 RNA TARGET WITH TWO MISMATCHES. DBREF 3HK2 A 1 685 UNP Q746M7 Q746M7_THET2 1 685 DBREF 3HK2 B 1 685 UNP Q746M7 Q746M7_THET2 1 685 DBREF 3HK2 C 1 21 PDB 3HK2 3HK2 1 21 DBREF 3HK2 E 1 21 PDB 3HK2 3HK2 1 21 DBREF 3HK2 F 1 19 PDB 3HK2 3HK2 1 19 DBREF 3HK2 D 1 19 PDB 3HK2 3HK2 1 19 SEQADV 3HK2 ASN A 478 UNP Q746M7 ASP 478 ENGINEERED MUTATION SEQADV 3HK2 ASN B 478 UNP Q746M7 ASP 478 ENGINEERED MUTATION SEQRES 1 A 685 MET ASN HIS LEU GLY LYS THR GLU VAL PHE LEU ASN ARG SEQRES 2 A 685 PHE ALA LEU ARG PRO LEU ASN PRO GLU GLU LEU ARG PRO SEQRES 3 A 685 TRP ARG LEU GLU VAL VAL LEU ASP PRO PRO PRO GLY ARG SEQRES 4 A 685 GLU GLU VAL TYR PRO LEU LEU ALA GLN VAL ALA ARG ARG SEQRES 5 A 685 ALA GLY GLY VAL THR VAL ARG MET GLY ASP GLY LEU ALA SEQRES 6 A 685 SER TRP SER PRO PRO GLU VAL LEU VAL LEU GLU GLY THR SEQRES 7 A 685 LEU ALA ARG MET GLY GLN THR TYR ALA TYR ARG LEU TYR SEQRES 8 A 685 PRO LYS GLY ARG ARG PRO LEU ASP PRO LYS ASP PRO GLY SEQRES 9 A 685 GLU ARG SER VAL LEU SER ALA LEU ALA ARG ARG LEU LEU SEQRES 10 A 685 GLN GLU ARG LEU ARG ARG LEU GLU GLY VAL TRP VAL GLU SEQRES 11 A 685 GLY LEU ALA VAL TYR ARG ARG GLU HIS ALA ARG GLY PRO SEQRES 12 A 685 GLY TRP ARG VAL LEU GLY GLY ALA VAL LEU ASP LEU TRP SEQRES 13 A 685 VAL SER ASP SER GLY ALA PHE LEU LEU GLU VAL ASP PRO SEQRES 14 A 685 ALA TYR ARG ILE LEU CYS GLU MET SER LEU GLU ALA TRP SEQRES 15 A 685 LEU ALA GLN GLY HIS PRO LEU PRO LYS ARG VAL ARG ASN SEQRES 16 A 685 ALA TYR ASP ARG ARG THR TRP GLU LEU LEU ARG LEU GLY SEQRES 17 A 685 GLU GLU ASP PRO LYS GLU LEU PRO LEU PRO GLY GLY LEU SEQRES 18 A 685 SER LEU LEU ASP TYR HIS ALA SER LYS GLY ARG LEU GLN SEQRES 19 A 685 GLY ARG GLU GLY GLY ARG VAL ALA TRP VAL ALA ASP PRO SEQRES 20 A 685 LYS ASP PRO ARG LYS PRO ILE PRO HIS LEU THR GLY LEU SEQRES 21 A 685 LEU VAL PRO VAL LEU THR LEU GLU ASP LEU HIS GLU GLU SEQRES 22 A 685 GLU GLY SER LEU ALA LEU SER LEU PRO TRP GLU GLU ARG SEQRES 23 A 685 ARG ARG ARG THR ARG GLU ILE ALA SER TRP ILE GLY ARG SEQRES 24 A 685 ARG LEU GLY LEU GLY THR PRO GLU ALA VAL ARG ALA GLN SEQRES 25 A 685 ALA TYR ARG LEU SER ILE PRO LYS LEU MET GLY ARG ARG SEQRES 26 A 685 ALA VAL SER LYS PRO ALA ASP ALA LEU ARG VAL GLY PHE SEQRES 27 A 685 TYR ARG ALA GLN GLU THR ALA LEU ALA LEU LEU ARG LEU SEQRES 28 A 685 ASP GLY ALA GLN GLY TRP PRO GLU PHE LEU ARG ARG ALA SEQRES 29 A 685 LEU LEU ARG ALA PHE GLY ALA SER GLY ALA SER LEU ARG SEQRES 30 A 685 LEU HIS THR LEU HIS ALA HIS PRO SER GLN GLY LEU ALA SEQRES 31 A 685 PHE ARG GLU ALA LEU ARG LYS ALA LYS GLU GLU GLY VAL SEQRES 32 A 685 GLN ALA VAL LEU VAL LEU THR PRO PRO MET ALA TRP GLU SEQRES 33 A 685 ASP ARG ASN ARG LEU LYS ALA LEU LEU LEU ARG GLU GLY SEQRES 34 A 685 LEU PRO SER GLN ILE LEU ASN VAL PRO LEU ARG GLU GLU SEQRES 35 A 685 GLU ARG HIS ARG TRP GLU ASN ALA LEU LEU GLY LEU LEU SEQRES 36 A 685 ALA LYS ALA GLY LEU GLN VAL VAL ALA LEU SER GLY ALA SEQRES 37 A 685 TYR PRO ALA GLU LEU ALA VAL GLY PHE ASN ALA GLY GLY SEQRES 38 A 685 ARG GLU SER PHE ARG PHE GLY GLY ALA ALA CYS ALA VAL SEQRES 39 A 685 GLY GLY ASP GLY GLY HIS LEU LEU TRP THR LEU PRO GLU SEQRES 40 A 685 ALA GLN ALA GLY GLU ARG ILE PRO GLN GLU VAL VAL TRP SEQRES 41 A 685 ASP LEU LEU GLU GLU THR LEU TRP ALA PHE ARG ARG LYS SEQRES 42 A 685 ALA GLY ARG LEU PRO SER ARG VAL LEU LEU LEU ARG ASP SEQRES 43 A 685 GLY ARG VAL PRO GLN ASP GLU PHE ALA LEU ALA LEU GLU SEQRES 44 A 685 ALA LEU ALA ARG GLU GLY ILE ALA TYR ASP LEU VAL SER SEQRES 45 A 685 VAL ARG LYS SER GLY GLY GLY ARG VAL TYR PRO VAL GLN SEQRES 46 A 685 GLY ARG LEU ALA ASP GLY LEU TYR VAL PRO LEU GLU ASP SEQRES 47 A 685 LYS THR PHE LEU LEU LEU THR VAL HIS ARG ASP PHE ARG SEQRES 48 A 685 GLY THR PRO ARG PRO LEU LYS LEU VAL HIS GLU ALA GLY SEQRES 49 A 685 ASP THR PRO LEU GLU ALA LEU ALA HIS GLN ILE PHE HIS SEQRES 50 A 685 LEU THR ARG LEU TYR PRO ALA SER GLY PHE ALA PHE PRO SEQRES 51 A 685 ARG LEU PRO ALA PRO LEU HIS LEU ALA ASP ARG LEU VAL SEQRES 52 A 685 LYS GLU VAL GLY ARG LEU GLY ILE ARG HIS LEU LYS GLU SEQRES 53 A 685 VAL ASP ARG GLU LYS LEU PHE PHE VAL SEQRES 1 B 685 MET ASN HIS LEU GLY LYS THR GLU VAL PHE LEU ASN ARG SEQRES 2 B 685 PHE ALA LEU ARG PRO LEU ASN PRO GLU GLU LEU ARG PRO SEQRES 3 B 685 TRP ARG LEU GLU VAL VAL LEU ASP PRO PRO PRO GLY ARG SEQRES 4 B 685 GLU GLU VAL TYR PRO LEU LEU ALA GLN VAL ALA ARG ARG SEQRES 5 B 685 ALA GLY GLY VAL THR VAL ARG MET GLY ASP GLY LEU ALA SEQRES 6 B 685 SER TRP SER PRO PRO GLU VAL LEU VAL LEU GLU GLY THR SEQRES 7 B 685 LEU ALA ARG MET GLY GLN THR TYR ALA TYR ARG LEU TYR SEQRES 8 B 685 PRO LYS GLY ARG ARG PRO LEU ASP PRO LYS ASP PRO GLY SEQRES 9 B 685 GLU ARG SER VAL LEU SER ALA LEU ALA ARG ARG LEU LEU SEQRES 10 B 685 GLN GLU ARG LEU ARG ARG LEU GLU GLY VAL TRP VAL GLU SEQRES 11 B 685 GLY LEU ALA VAL TYR ARG ARG GLU HIS ALA ARG GLY PRO SEQRES 12 B 685 GLY TRP ARG VAL LEU GLY GLY ALA VAL LEU ASP LEU TRP SEQRES 13 B 685 VAL SER ASP SER GLY ALA PHE LEU LEU GLU VAL ASP PRO SEQRES 14 B 685 ALA TYR ARG ILE LEU CYS GLU MET SER LEU GLU ALA TRP SEQRES 15 B 685 LEU ALA GLN GLY HIS PRO LEU PRO LYS ARG VAL ARG ASN SEQRES 16 B 685 ALA TYR ASP ARG ARG THR TRP GLU LEU LEU ARG LEU GLY SEQRES 17 B 685 GLU GLU ASP PRO LYS GLU LEU PRO LEU PRO GLY GLY LEU SEQRES 18 B 685 SER LEU LEU ASP TYR HIS ALA SER LYS GLY ARG LEU GLN SEQRES 19 B 685 GLY ARG GLU GLY GLY ARG VAL ALA TRP VAL ALA ASP PRO SEQRES 20 B 685 LYS ASP PRO ARG LYS PRO ILE PRO HIS LEU THR GLY LEU SEQRES 21 B 685 LEU VAL PRO VAL LEU THR LEU GLU ASP LEU HIS GLU GLU SEQRES 22 B 685 GLU GLY SER LEU ALA LEU SER LEU PRO TRP GLU GLU ARG SEQRES 23 B 685 ARG ARG ARG THR ARG GLU ILE ALA SER TRP ILE GLY ARG SEQRES 24 B 685 ARG LEU GLY LEU GLY THR PRO GLU ALA VAL ARG ALA GLN SEQRES 25 B 685 ALA TYR ARG LEU SER ILE PRO LYS LEU MET GLY ARG ARG SEQRES 26 B 685 ALA VAL SER LYS PRO ALA ASP ALA LEU ARG VAL GLY PHE SEQRES 27 B 685 TYR ARG ALA GLN GLU THR ALA LEU ALA LEU LEU ARG LEU SEQRES 28 B 685 ASP GLY ALA GLN GLY TRP PRO GLU PHE LEU ARG ARG ALA SEQRES 29 B 685 LEU LEU ARG ALA PHE GLY ALA SER GLY ALA SER LEU ARG SEQRES 30 B 685 LEU HIS THR LEU HIS ALA HIS PRO SER GLN GLY LEU ALA SEQRES 31 B 685 PHE ARG GLU ALA LEU ARG LYS ALA LYS GLU GLU GLY VAL SEQRES 32 B 685 GLN ALA VAL LEU VAL LEU THR PRO PRO MET ALA TRP GLU SEQRES 33 B 685 ASP ARG ASN ARG LEU LYS ALA LEU LEU LEU ARG GLU GLY SEQRES 34 B 685 LEU PRO SER GLN ILE LEU ASN VAL PRO LEU ARG GLU GLU SEQRES 35 B 685 GLU ARG HIS ARG TRP GLU ASN ALA LEU LEU GLY LEU LEU SEQRES 36 B 685 ALA LYS ALA GLY LEU GLN VAL VAL ALA LEU SER GLY ALA SEQRES 37 B 685 TYR PRO ALA GLU LEU ALA VAL GLY PHE ASN ALA GLY GLY SEQRES 38 B 685 ARG GLU SER PHE ARG PHE GLY GLY ALA ALA CYS ALA VAL SEQRES 39 B 685 GLY GLY ASP GLY GLY HIS LEU LEU TRP THR LEU PRO GLU SEQRES 40 B 685 ALA GLN ALA GLY GLU ARG ILE PRO GLN GLU VAL VAL TRP SEQRES 41 B 685 ASP LEU LEU GLU GLU THR LEU TRP ALA PHE ARG ARG LYS SEQRES 42 B 685 ALA GLY ARG LEU PRO SER ARG VAL LEU LEU LEU ARG ASP SEQRES 43 B 685 GLY ARG VAL PRO GLN ASP GLU PHE ALA LEU ALA LEU GLU SEQRES 44 B 685 ALA LEU ALA ARG GLU GLY ILE ALA TYR ASP LEU VAL SER SEQRES 45 B 685 VAL ARG LYS SER GLY GLY GLY ARG VAL TYR PRO VAL GLN SEQRES 46 B 685 GLY ARG LEU ALA ASP GLY LEU TYR VAL PRO LEU GLU ASP SEQRES 47 B 685 LYS THR PHE LEU LEU LEU THR VAL HIS ARG ASP PHE ARG SEQRES 48 B 685 GLY THR PRO ARG PRO LEU LYS LEU VAL HIS GLU ALA GLY SEQRES 49 B 685 ASP THR PRO LEU GLU ALA LEU ALA HIS GLN ILE PHE HIS SEQRES 50 B 685 LEU THR ARG LEU TYR PRO ALA SER GLY PHE ALA PHE PRO SEQRES 51 B 685 ARG LEU PRO ALA PRO LEU HIS LEU ALA ASP ARG LEU VAL SEQRES 52 B 685 LYS GLU VAL GLY ARG LEU GLY ILE ARG HIS LEU LYS GLU SEQRES 53 B 685 VAL ASP ARG GLU LYS LEU PHE PHE VAL SEQRES 1 C 21 DT DG DA DG DG DT DA DG DT DA DG DG DT SEQRES 2 C 21 DT DG DT DA DT DA DG DT SEQRES 1 E 21 DT DG DA DG DG DT DA DG DT DA DG DG DT SEQRES 2 E 21 DT DG DT DA DT DA DG DT SEQRES 1 F 19 U A U A C A A C C U A C U SEQRES 2 F 19 A C C U C G SEQRES 1 D 19 U A U A C A A C C U A C U SEQRES 2 D 19 A C C U C G HET MG A 686 1 HET MG B 686 1 HET MG C 22 1 HET MG E 22 1 HETNAM MG MAGNESIUM ION FORMUL 7 MG 4(MG 2+) FORMUL 11 HOH *14(H2 O) HELIX 1 1 GLU A 41 GLY A 54 1 14 HELIX 2 2 PRO A 69 LEU A 73 5 5 HELIX 3 3 GLY A 104 ARG A 123 1 20 HELIX 4 4 GLU A 180 GLN A 185 1 6 HELIX 5 5 SER A 222 SER A 229 1 8 HELIX 6 6 PRO A 282 ARG A 300 1 19 HELIX 7 7 LYS A 329 ALA A 331 5 3 HELIX 8 8 ASP A 332 GLY A 337 1 6 HELIX 9 9 PRO A 358 GLY A 373 1 16 HELIX 10 10 HIS A 384 GLN A 387 5 4 HELIX 11 11 GLY A 388 GLU A 401 1 14 HELIX 12 12 ALA A 414 ARG A 427 1 14 HELIX 13 13 GLU A 443 GLY A 459 1 17 HELIX 14 14 PRO A 515 ALA A 534 1 20 HELIX 15 15 PHE A 554 GLU A 564 1 11 HELIX 16 16 PRO A 627 THR A 639 1 13 HELIX 17 17 PRO A 653 GLY A 670 1 18 HELIX 18 18 ILE A 671 VAL A 677 5 7 HELIX 19 19 GLU B 41 GLY B 54 1 14 HELIX 20 20 PRO B 69 LEU B 73 5 5 HELIX 21 21 ASP B 102 ARG B 123 1 22 HELIX 22 22 GLU B 180 GLN B 185 1 6 HELIX 23 23 SER B 222 SER B 229 1 8 HELIX 24 24 PRO B 282 ARG B 300 1 19 HELIX 25 25 LYS B 329 ALA B 331 5 3 HELIX 26 26 ASP B 332 GLY B 337 1 6 HELIX 27 27 PRO B 358 GLY B 373 1 16 HELIX 28 28 HIS B 384 GLN B 387 5 4 HELIX 29 29 GLY B 388 GLU B 401 1 14 HELIX 30 30 ALA B 414 ARG B 427 1 14 HELIX 31 31 GLU B 443 GLY B 459 1 17 HELIX 32 32 PRO B 515 ALA B 534 1 20 HELIX 33 33 PHE B 554 GLU B 564 1 11 HELIX 34 34 PRO B 627 THR B 639 1 13 HELIX 35 35 PRO B 653 GLY B 670 1 18 HELIX 36 36 ILE B 671 VAL B 677 5 7 SHEET 1 A13 ALA A 133 VAL A 134 0 SHEET 2 A13 ALA A 151 TRP A 156 -1 O ALA A 151 N VAL A 134 SHEET 3 A13 ALA A 162 PRO A 169 -1 O ASP A 168 N VAL A 152 SHEET 4 A13 LYS A 6 PRO A 18 -1 N ARG A 17 O PHE A 163 SHEET 5 A13 GLU A 307 ARG A 315 -1 O GLU A 307 N ALA A 15 SHEET 6 A13 LEU A 592 PRO A 595 -1 O TYR A 593 N TYR A 314 SHEET 7 A13 THR A 600 LEU A 604 -1 O LEU A 604 N LEU A 592 SHEET 8 A13 LEU A 617 ALA A 623 -1 O LEU A 619 N PHE A 601 SHEET 9 A13 ALA A 567 ARG A 574 -1 N LEU A 570 O ALA A 623 SHEET 10 A13 ARG A 540 ARG A 545 1 N LEU A 543 O ASP A 569 SHEET 11 A13 LEU A 473 ALA A 479 1 N LEU A 473 O LEU A 542 SHEET 12 A13 ARG A 486 VAL A 494 -1 O GLY A 489 N ASN A 478 SHEET 13 A13 GLU A 507 GLN A 509 -1 O GLN A 509 N ARG A 486 SHEET 1 B11 HIS A 500 TRP A 503 0 SHEET 2 B11 ARG A 486 VAL A 494 -1 N VAL A 494 O HIS A 500 SHEET 3 B11 LEU A 473 ALA A 479 -1 N ASN A 478 O GLY A 489 SHEET 4 B11 ARG A 540 ARG A 545 1 O LEU A 542 N LEU A 473 SHEET 5 B11 ALA A 567 ARG A 574 1 O ASP A 569 N LEU A 543 SHEET 6 B11 LEU A 617 ALA A 623 -1 O ALA A 623 N LEU A 570 SHEET 7 B11 THR A 600 LEU A 604 -1 N PHE A 601 O LEU A 619 SHEET 8 B11 LEU A 592 PRO A 595 -1 N LEU A 592 O LEU A 604 SHEET 9 B11 GLU A 307 ARG A 315 -1 N TYR A 314 O TYR A 593 SHEET 10 B11 LYS A 6 PRO A 18 -1 N ALA A 15 O GLU A 307 SHEET 11 B11 VAL A 581 PRO A 583 -1 O TYR A 582 N PHE A 10 SHEET 1 C 4 THR A 57 MET A 60 0 SHEET 2 C 4 GLY A 63 SER A 66 -1 O GLY A 63 N MET A 60 SHEET 3 C 4 TRP A 27 GLU A 30 -1 N TRP A 27 O SER A 66 SHEET 4 C 4 TYR A 91 ARG A 95 -1 O GLY A 94 N ARG A 28 SHEET 1 D 2 LEU A 79 ARG A 81 0 SHEET 2 D 2 GLN A 84 TYR A 86 -1 O TYR A 86 N LEU A 79 SHEET 1 E 2 TRP A 145 LEU A 148 0 SHEET 2 E 2 ARG A 172 CYS A 175 -1 O LEU A 174 N ARG A 146 SHEET 1 F 3 THR A 201 TRP A 202 0 SHEET 2 F 3 ARG A 192 ASN A 195 -1 N VAL A 193 O TRP A 202 SHEET 3 F 3 LEU A 261 VAL A 264 -1 O VAL A 262 N ARG A 194 SHEET 1 G 2 VAL A 244 ALA A 245 0 SHEET 2 G 2 PRO A 253 ILE A 254 -1 O ILE A 254 N VAL A 244 SHEET 1 H 2 LYS A 320 MET A 322 0 SHEET 2 H 2 ALA A 464 SER A 466 -1 O ALA A 464 N MET A 322 SHEET 1 I 4 LEU A 376 THR A 380 0 SHEET 2 I 4 THR A 344 ARG A 350 1 N LEU A 346 O ARG A 377 SHEET 3 I 4 VAL A 403 THR A 410 1 O LEU A 407 N LEU A 349 SHEET 4 I 4 SER A 432 ASN A 436 1 O GLN A 433 N VAL A 408 SHEET 1 J13 ALA B 133 VAL B 134 0 SHEET 2 J13 ALA B 151 TRP B 156 -1 O ALA B 151 N VAL B 134 SHEET 3 J13 ALA B 162 PRO B 169 -1 O ASP B 168 N VAL B 152 SHEET 4 J13 LYS B 6 PRO B 18 -1 N ARG B 17 O PHE B 163 SHEET 5 J13 GLU B 307 ARG B 315 -1 O GLU B 307 N ALA B 15 SHEET 6 J13 LEU B 592 PRO B 595 -1 O TYR B 593 N TYR B 314 SHEET 7 J13 THR B 600 LEU B 604 -1 O LEU B 604 N LEU B 592 SHEET 8 J13 LEU B 617 ALA B 623 -1 O LEU B 619 N PHE B 601 SHEET 9 J13 ALA B 567 ARG B 574 -1 N LEU B 570 O ALA B 623 SHEET 10 J13 ARG B 540 ARG B 545 1 N LEU B 543 O ASP B 569 SHEET 11 J13 LEU B 473 ALA B 479 1 N LEU B 473 O LEU B 542 SHEET 12 J13 ARG B 486 VAL B 494 -1 O GLY B 489 N ASN B 478 SHEET 13 J13 GLU B 507 GLN B 509 -1 O GLN B 509 N ARG B 486 SHEET 1 K11 HIS B 500 TRP B 503 0 SHEET 2 K11 ARG B 486 VAL B 494 -1 N VAL B 494 O HIS B 500 SHEET 3 K11 LEU B 473 ALA B 479 -1 N ASN B 478 O GLY B 489 SHEET 4 K11 ARG B 540 ARG B 545 1 O LEU B 542 N LEU B 473 SHEET 5 K11 ALA B 567 ARG B 574 1 O ASP B 569 N LEU B 543 SHEET 6 K11 LEU B 617 ALA B 623 -1 O ALA B 623 N LEU B 570 SHEET 7 K11 THR B 600 LEU B 604 -1 N PHE B 601 O LEU B 619 SHEET 8 K11 LEU B 592 PRO B 595 -1 N LEU B 592 O LEU B 604 SHEET 9 K11 GLU B 307 ARG B 315 -1 N TYR B 314 O TYR B 593 SHEET 10 K11 LYS B 6 PRO B 18 -1 N ALA B 15 O GLU B 307 SHEET 11 K11 VAL B 581 PRO B 583 -1 O TYR B 582 N PHE B 10 SHEET 1 L 4 THR B 57 MET B 60 0 SHEET 2 L 4 GLY B 63 SER B 66 -1 O GLY B 63 N MET B 60 SHEET 3 L 4 TRP B 27 GLU B 30 -1 N TRP B 27 O SER B 66 SHEET 4 L 4 TYR B 91 ARG B 95 -1 O GLY B 94 N ARG B 28 SHEET 1 M 2 LEU B 79 ARG B 81 0 SHEET 2 M 2 GLN B 84 TYR B 86 -1 O TYR B 86 N LEU B 79 SHEET 1 N 2 TRP B 145 LEU B 148 0 SHEET 2 N 2 ARG B 172 CYS B 175 -1 O LEU B 174 N ARG B 146 SHEET 1 O 3 THR B 201 TRP B 202 0 SHEET 2 O 3 ARG B 192 ASN B 195 -1 N VAL B 193 O TRP B 202 SHEET 3 O 3 LEU B 261 VAL B 264 -1 O VAL B 262 N ARG B 194 SHEET 1 P 2 VAL B 244 ALA B 245 0 SHEET 2 P 2 PRO B 253 ILE B 254 -1 O ILE B 254 N VAL B 244 SHEET 1 Q 2 LYS B 320 MET B 322 0 SHEET 2 Q 2 ALA B 464 SER B 466 -1 O ALA B 464 N MET B 322 SHEET 1 R 4 LEU B 376 THR B 380 0 SHEET 2 R 4 THR B 344 ARG B 350 1 N LEU B 346 O ARG B 377 SHEET 3 R 4 VAL B 403 THR B 410 1 O LEU B 407 N LEU B 349 SHEET 4 R 4 SER B 432 ASN B 436 1 O GLN B 433 N VAL B 408 SITE 1 AC1 5 GLN A 433 LYS A 457 VAL A 685 DT C 1 SITE 2 AC1 5 DA C 3 SITE 1 AC2 5 ASN A 478 ALA A 479 ASP A 546 C D 9 SITE 2 AC2 5 U D 10 SITE 1 AC3 4 LYS B 457 VAL B 685 DT E 1 DA E 3 SITE 1 AC4 5 ASN B 478 ALA B 479 ASP B 546 C F 9 SITE 2 AC4 5 U F 10 CRYST1 111.193 110.884 174.339 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008993 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009018 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005736 0.00000