PDB Short entry for 3HR0 HEADER TRANSPORT PROTEIN 08-JUN-09 3HR0 TITLE CRYSTAL STRUCTURE OF HOMO SAPIENS CONSERVED OLIGOMERIC GOLGI SUBUNIT 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: COG4; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 525-785; COMPND 5 SYNONYM: CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4, COMPONENT OF COMPND 6 OLIGOMERIC GOLGI COMPLEX 4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: COG4, COG4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDU01 KEYWDS CONSERVED OLIGOMERIC GOLGI COMPLEX, INTRACELLULAR TRAFFICKING, KEYWDS 2 VESICLE TETHERING, MULTISUBUNIT TETHERING COMPLEX, EXOCYST, KEYWDS 3 ALTERNATIVE SPLICING, GOLGI APPARATUS, MEMBRANE, PHOSPHOPROTEIN, KEYWDS 4 PROTEIN TRANSPORT, TRANSPORT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.C.RICHARDSON,D.UNGAR,A.NAKAMURA,P.D.JEFFREY,F.M.HUGHSON REVDAT 4 21-FEB-24 3HR0 1 SEQADV REVDAT 3 01-NOV-17 3HR0 1 REMARK REVDAT 2 18-AUG-09 3HR0 1 HELIX JRNL REVDAT 1 21-JUL-09 3HR0 0 JRNL AUTH B.C.RICHARDSON,R.D.SMITH,D.UNGAR,A.NAKAMURA,P.D.JEFFREY, JRNL AUTH 2 V.V.LUPASHIN,F.M.HUGHSON JRNL TITL STRUCTURAL BASIS FOR A HUMAN GLYCOSYLATION DISORDER CAUSED JRNL TITL 2 BY MUTATION OF THE COG4 GENE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 13329 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19651599 JRNL DOI 10.1073/PNAS.0901966106 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 74786 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3753 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5102 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE SET COUNT : 269 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3990 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 385 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.107 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.343 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4019 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5453 ; 1.191 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 537 A 719 5 REMARK 3 1 B 537 B 719 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 732 ; 0.630 ; 0.500 REMARK 3 LOOSE POSITIONAL 1 A (A): 690 ; 0.790 ; 5.000 REMARK 3 MEDIUM THERMAL 1 A (A**2): 732 ; 1.430 ; 2.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 690 ; 2.670 ;10.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 758 A 785 5 REMARK 3 1 B 758 B 785 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 A (A): 112 ; 0.180 ; 0.500 REMARK 3 LOOSE POSITIONAL 2 A (A): 124 ; 0.700 ; 5.000 REMARK 3 MEDIUM THERMAL 2 A (A**2): 112 ; 1.000 ; 2.000 REMARK 3 LOOSE THERMAL 2 A (A**2): 124 ; 3.440 ;10.000 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 723 A 749 5 REMARK 3 1 B 723 B 749 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 3 A (A): 108 ; 0.130 ; 0.500 REMARK 3 LOOSE POSITIONAL 3 A (A): 117 ; 0.610 ; 5.000 REMARK 3 MEDIUM THERMAL 3 A (A**2): 108 ; 1.880 ; 2.000 REMARK 3 LOOSE THERMAL 3 A (A**2): 117 ; 3.710 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HR0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053476. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-07; 24-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X29A; X29A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0809; 0.9792,0.9794,0.9611 REMARK 200 MONOCHROMATOR : SI(111); SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74854 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.4850 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.35700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG-4000, 10 MM AMMONIUM NITRATE, REMARK 280 2.5% GLYCEROL, 12 MM DTT, 10 MM TRIS, 150 MM POTASSIUM CHLORIDE, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 143.18200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.59100 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 71.59100 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 143.18200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 523 REMARK 465 SER A 524 REMARK 465 GLN A 525 REMARK 465 GLN A 526 REMARK 465 GLY A 527 REMARK 465 LYS A 528 REMARK 465 PHE A 529 REMARK 465 ASP A 530 REMARK 465 THR A 531 REMARK 465 LYS A 532 REMARK 465 GLY A 533 REMARK 465 ILE A 534 REMARK 465 GLU A 535 REMARK 465 GLY B 523 REMARK 465 SER B 524 REMARK 465 GLN B 525 REMARK 465 GLN B 526 REMARK 465 GLY B 527 REMARK 465 LYS B 528 REMARK 465 PHE B 529 REMARK 465 ASP B 530 REMARK 465 THR B 531 REMARK 465 LYS B 532 REMARK 465 GLY B 533 REMARK 465 ILE B 534 REMARK 465 GLU B 535 REMARK 465 SER B 536 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASN A 598 OD2 ASP B 705 4545 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 648 -61.18 -152.79 REMARK 500 TRP B 648 -55.31 -150.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED DBREF 3HR0 A 525 785 UNP Q9H9E3 COG4_HUMAN 525 785 DBREF 3HR0 B 525 785 UNP Q9H9E3 COG4_HUMAN 525 785 SEQADV 3HR0 GLY A 523 UNP Q9H9E3 EXPRESSION TAG SEQADV 3HR0 SER A 524 UNP Q9H9E3 EXPRESSION TAG SEQADV 3HR0 GLY B 523 UNP Q9H9E3 EXPRESSION TAG SEQADV 3HR0 SER B 524 UNP Q9H9E3 EXPRESSION TAG SEQRES 1 A 263 GLY SER GLN GLN GLY LYS PHE ASP THR LYS GLY ILE GLU SEQRES 2 A 263 SER THR ASP GLU ALA LYS MET SER PHE LEU VAL THR LEU SEQRES 3 A 263 ASN ASN VAL GLU VAL CYS SER GLU ASN ILE SER THR LEU SEQRES 4 A 263 LYS LYS THR LEU GLU SER ASP CYS THR LYS LEU PHE SER SEQRES 5 A 263 GLN GLY ILE GLY GLY GLU GLN ALA GLN ALA LYS PHE ASP SEQRES 6 A 263 SER CYS LEU SER ASP LEU ALA ALA VAL SER ASN LYS PHE SEQRES 7 A 263 ARG ASP LEU LEU GLN GLU GLY LEU THR GLU LEU ASN SER SEQRES 8 A 263 THR ALA ILE LYS PRO GLN VAL GLN PRO TRP ILE ASN SER SEQRES 9 A 263 PHE PHE SER VAL SER HIS ASN ILE GLU GLU GLU GLU PHE SEQRES 10 A 263 ASN ASP TYR GLU ALA ASN ASP PRO TRP VAL GLN GLN PHE SEQRES 11 A 263 ILE LEU ASN LEU GLU GLN GLN MET ALA GLU PHE LYS ALA SEQRES 12 A 263 SER LEU SER PRO VAL ILE TYR ASP SER LEU THR GLY LEU SEQRES 13 A 263 MET THR SER LEU VAL ALA VAL GLU LEU GLU LYS VAL VAL SEQRES 14 A 263 LEU LYS SER THR PHE ASN ARG LEU GLY GLY LEU GLN PHE SEQRES 15 A 263 ASP LYS GLU LEU ARG SER LEU ILE ALA TYR LEU THR THR SEQRES 16 A 263 VAL THR THR TRP THR ILE ARG ASP LYS PHE ALA ARG LEU SEQRES 17 A 263 SER GLN MET ALA THR ILE LEU ASN LEU GLU ARG VAL THR SEQRES 18 A 263 GLU ILE LEU ASP TYR TRP GLY PRO ASN SER GLY PRO LEU SEQRES 19 A 263 THR TRP ARG LEU THR PRO ALA GLU VAL ARG GLN VAL LEU SEQRES 20 A 263 ALA LEU ARG ILE ASP PHE ARG SER GLU ASP ILE LYS ARG SEQRES 21 A 263 LEU ARG LEU SEQRES 1 B 263 GLY SER GLN GLN GLY LYS PHE ASP THR LYS GLY ILE GLU SEQRES 2 B 263 SER THR ASP GLU ALA LYS MET SER PHE LEU VAL THR LEU SEQRES 3 B 263 ASN ASN VAL GLU VAL CYS SER GLU ASN ILE SER THR LEU SEQRES 4 B 263 LYS LYS THR LEU GLU SER ASP CYS THR LYS LEU PHE SER SEQRES 5 B 263 GLN GLY ILE GLY GLY GLU GLN ALA GLN ALA LYS PHE ASP SEQRES 6 B 263 SER CYS LEU SER ASP LEU ALA ALA VAL SER ASN LYS PHE SEQRES 7 B 263 ARG ASP LEU LEU GLN GLU GLY LEU THR GLU LEU ASN SER SEQRES 8 B 263 THR ALA ILE LYS PRO GLN VAL GLN PRO TRP ILE ASN SER SEQRES 9 B 263 PHE PHE SER VAL SER HIS ASN ILE GLU GLU GLU GLU PHE SEQRES 10 B 263 ASN ASP TYR GLU ALA ASN ASP PRO TRP VAL GLN GLN PHE SEQRES 11 B 263 ILE LEU ASN LEU GLU GLN GLN MET ALA GLU PHE LYS ALA SEQRES 12 B 263 SER LEU SER PRO VAL ILE TYR ASP SER LEU THR GLY LEU SEQRES 13 B 263 MET THR SER LEU VAL ALA VAL GLU LEU GLU LYS VAL VAL SEQRES 14 B 263 LEU LYS SER THR PHE ASN ARG LEU GLY GLY LEU GLN PHE SEQRES 15 B 263 ASP LYS GLU LEU ARG SER LEU ILE ALA TYR LEU THR THR SEQRES 16 B 263 VAL THR THR TRP THR ILE ARG ASP LYS PHE ALA ARG LEU SEQRES 17 B 263 SER GLN MET ALA THR ILE LEU ASN LEU GLU ARG VAL THR SEQRES 18 B 263 GLU ILE LEU ASP TYR TRP GLY PRO ASN SER GLY PRO LEU SEQRES 19 B 263 THR TRP ARG LEU THR PRO ALA GLU VAL ARG GLN VAL LEU SEQRES 20 B 263 ALA LEU ARG ILE ASP PHE ARG SER GLU ASP ILE LYS ARG SEQRES 21 B 263 LEU ARG LEU FORMUL 3 HOH *385(H2 O) HELIX 1 1 THR A 537 SER A 574 1 38 HELIX 2 2 GLU A 580 ALA A 615 1 36 HELIX 3 3 LYS A 617 SER A 629 1 13 HELIX 4 4 GLU A 636 ALA A 644 1 9 HELIX 5 5 VAL A 649 SER A 666 1 18 HELIX 6 6 PRO A 669 LYS A 693 1 25 HELIX 7 7 ARG A 698 VAL A 718 1 21 HELIX 8 8 ALA A 728 ASN A 738 1 11 HELIX 9 9 VAL A 742 TYR A 748 1 7 HELIX 10 10 PRO A 762 LEU A 771 1 10 HELIX 11 11 SER A 777 ARG A 782 1 6 HELIX 12 12 THR B 537 SER B 574 1 38 HELIX 13 13 GLU B 580 ALA B 615 1 36 HELIX 14 14 LYS B 617 SER B 629 1 13 HELIX 15 15 GLU B 636 ALA B 644 1 9 HELIX 16 16 VAL B 649 SER B 666 1 18 HELIX 17 17 PRO B 669 LYS B 693 1 25 HELIX 18 18 ARG B 698 VAL B 718 1 21 HELIX 19 19 ALA B 728 ASN B 738 1 11 HELIX 20 20 VAL B 742 TYR B 748 1 7 HELIX 21 21 PRO B 762 LEU B 771 1 10 HELIX 22 22 SER B 777 ARG B 782 1 6 CRYST1 87.114 87.114 214.773 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011479 0.006628 0.000000 0.00000 SCALE2 0.000000 0.013255 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004656 0.00000