PDB Short entry for 3IE7
HEADER    TRANSFERASE                             22-JUL-09   3IE7              
TITLE     THE CRYSTAL STRUCTURE OF PHOSPHOFRUCTOKINASE (LIN2199) FROM LISTERIA  
TITLE    2 INNOCUA IN COMPLEX WITH ATP AT 1.6A                                  
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: LIN2199 PROTEIN;                                           
COMPND   3 CHAIN: A;                                                            
COMPND   4 EC: 2.7.1.-;                                                         
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: LISTERIA INNOCUA;                               
SOURCE   3 ORGANISM_TAXID: 1642;                                                
SOURCE   4 GENE: LIN2199;                                                       
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODON + RIL;                     
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_VECTOR: BC-PSGX3 (BC);                             
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PSGX3                                     
KEYWDS    PHOSPHOFRUCTOKINASES, TRANSFERASE, LISTERIA INNOCUA, GLYCEROL, MG+2   
KEYWDS   2 ION, 11206N1, PSI-II, NYSGXRC, KINASE, STRUCTURAL GENOMICS, PROTEIN  
KEYWDS   3 STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL    
KEYWDS   4 GENOMICS                                                             
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    L.SATYANARAYANA,S.K.BURLEY,S.SWAMINATHAN,NEW YORK SGX RESEARCH CENTER 
AUTHOR   2 FOR STRUCTURAL GENOMICS (NYSGXRC)                                    
REVDAT   3   10-FEB-21 3IE7    1       AUTHOR JRNL   REMARK SEQADV              
REVDAT   3 2                   1       LINK                                     
REVDAT   2   13-JUL-11 3IE7    1       VERSN                                    
REVDAT   1   04-AUG-09 3IE7    0                                                
JRNL        AUTH   L.SATYANARAYANA,S.K.BURLEY,S.SWAMINATHAN                     
JRNL        TITL   THE CRYSTAL STRUCTURE OF PHOSPHOFRUCTOKINASE (LIN2199) FROM  
JRNL        TITL 2 LISTERIA INNOCUA IN COMPLEX WITH ATP AT 1.6A                 
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.60 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.1                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : ENGH & HUBER                                    
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 35.85                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 93.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 46781                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.219                           
REMARK   3   FREE R VALUE                     : 0.239                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : 1883                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.60                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.70                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 78.00                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2970                       
REMARK   3   BIN FREE R VALUE                    : 0.3240                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 250                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.020                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2352                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 40                                      
REMARK   3   SOLVENT ATOMS            : 272                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 26.80                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -3.19000                                             
REMARK   3    B22 (A**2) : 8.99000                                              
REMARK   3    B33 (A**2) : -5.80000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : -0.79000                                             
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.21                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.18                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.23                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.21                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.005                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.300                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 22.90                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : ISOTROPIC                                 
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : NULL                                                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PROTEIN_REP.PARAM                              
REMARK   3  PARAMETER FILE  2  : WATER_REP.PARAM                                
REMARK   3  PARAMETER FILE  3  : ION.PARAM                                      
REMARK   3  PARAMETER FILE  4  : ATP.PAR                                        
REMARK   3  PARAMETER FILE  5  : GLYCEROL.PARAM                                 
REMARK   3  PARAMETER FILE  6  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3  TOPOLOGY FILE  2   : NULL                                           
REMARK   3  TOPOLOGY FILE  3   : NULL                                           
REMARK   3  TOPOLOGY FILE  4   : NULL                                           
REMARK   3  TOPOLOGY FILE  5   : NULL                                           
REMARK   3  TOPOLOGY FILE  6   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 3IE7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUL-09.                  
REMARK 100 THE DEPOSITION ID IS D_1000054300.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 16-JUL-09                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : NSLS                               
REMARK 200  BEAMLINE                       : X25                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9792                             
REMARK 200  MONOCHROMATOR                  : SI 111 CHANNEL                     
REMARK 200  OPTICS                         : MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 48696                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.600                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 97.3                               
REMARK 200  DATA REDUNDANCY                : 6.900                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.06800                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 15.3000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.66                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 78.5                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 5.50                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.41300                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 8.700                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: PDB ENTRY 3HIC                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 54.44                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MGCL2,10MMATP,0.1M HEPES 7.5, 20%   
REMARK 280  PEG 3350%, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K, PH      
REMARK 280  7.5                                                                 
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       73.05400            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       23.12200            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       73.05400            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       23.12200            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 5370 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 25510 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -73.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MSE A    -3                                                      
REMARK 465     GLU A   309                                                      
REMARK 465     ARG A   310                                                      
REMARK 465     GLU A   311                                                      
REMARK 465     GLY A   312                                                      
REMARK 465     HIS A   313                                                      
REMARK 465     HIS A   314                                                      
REMARK 465     HIS A   315                                                      
REMARK 465     HIS A   316                                                      
REMARK 465     HIS A   317                                                      
REMARK 465     HIS A   318                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A  80       63.95   -152.40                                   
REMARK 500    ASN A 245      108.46   -160.38                                   
REMARK 500    ASP A 286     -166.87    -68.44                                   
REMARK 500    SER A 288      -29.21   -154.04                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A   1  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HOH A 504   O                                                      
REMARK 620 2 HOH A 505   O    94.6                                              
REMARK 620 3 ATP A 900   O1B  96.0 157.6                                        
REMARK 620 4 ATP A 900   O1A  86.4  77.8  83.3                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A 319  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HOH A 380   O                                                      
REMARK 620 2 HOH A 500   O    92.8                                              
REMARK 620 3 HOH A 502   O    89.4  88.4                                        
REMARK 620 4 HOH A 503   O    81.3  92.2 170.7                                  
REMARK 620 5 ATP A 900   O1G  92.2 169.0 101.5  78.8                            
REMARK 620 6 ATP A 900   O2B 170.1  86.2 100.4  88.9  87.3                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 900                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1                    
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 319                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 320                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 501                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3HIC   RELATED DB: PDB                                   
REMARK 900 THE CRYSTAL STRUCTURE OF PHOSPHOFRUCTOKINASE(LIN2199)FROM LISTERIA   
REMARK 900 INNOCUA                                                              
REMARK 900 RELATED ID: 3H49   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF A PUTATIVE RIBOKINASE (APO FORM) FROM E.COLI    
REMARK 900 AT 1.8A RESOLUTION                                                   
REMARK 900 RELATED ID: 3I3Y   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF RIBOKINASE IN COMPLEX WITH D-RIBOSE FROM        
REMARK 900 KLEBSIELLA PNEUMONIAE                                                
REMARK 900 RELATED ID: NYSGXRC-11206N   RELATED DB: TARGETDB                    
DBREF  3IE7 A    2   310  UNP    Q929S5   Q929S5_LISIN     2    310             
SEQADV 3IE7 MSE A   -3  UNP  Q929S5              INSERTION                      
SEQADV 3IE7 SER A   -2  UNP  Q929S5              INSERTION                      
SEQADV 3IE7 LEU A   -1  UNP  Q929S5              INSERTION                      
SEQADV 3IE7 GLU A  311  UNP  Q929S5              INSERTION                      
SEQADV 3IE7 GLY A  312  UNP  Q929S5              INSERTION                      
SEQADV 3IE7 HIS A  313  UNP  Q929S5              INSERTION                      
SEQADV 3IE7 HIS A  314  UNP  Q929S5              INSERTION                      
SEQADV 3IE7 HIS A  315  UNP  Q929S5              INSERTION                      
SEQADV 3IE7 HIS A  316  UNP  Q929S5              INSERTION                      
SEQADV 3IE7 HIS A  317  UNP  Q929S5              INSERTION                      
SEQADV 3IE7 HIS A  318  UNP  Q929S5              INSERTION                      
SEQRES   1 A  320  MSE SER LEU ILE TYR THR ILE THR LEU ASN PRO ALA ILE          
SEQRES   2 A  320  ASP ARG LEU LEU PHE ILE ARG GLY GLU LEU GLU LYS ARG          
SEQRES   3 A  320  LYS THR ASN ARG VAL ILE LYS THR GLU PHE ASP CYS GLY          
SEQRES   4 A  320  GLY LYS GLY LEU HIS VAL SER GLY VAL LEU SER LYS PHE          
SEQRES   5 A  320  GLY ILE LYS ASN GLU ALA LEU GLY ILE ALA GLY SER ASP          
SEQRES   6 A  320  ASN LEU ASP LYS LEU TYR ALA ILE LEU LYS GLU LYS HIS          
SEQRES   7 A  320  ILE ASN HIS ASP PHE LEU VAL GLU ALA GLY THR SER THR          
SEQRES   8 A  320  ARG GLU CYS PHE VAL VAL LEU SER ASP ASP THR ASN GLY          
SEQRES   9 A  320  SER THR MSE ILE PRO GLU ALA GLY PHE THR VAL SER GLN          
SEQRES  10 A  320  THR ASN LYS ASP ASN LEU LEU LYS GLN ILE ALA LYS LYS          
SEQRES  11 A  320  VAL LYS LYS GLU ASP MSE VAL VAL ILE ALA GLY SER PRO          
SEQRES  12 A  320  PRO PRO HIS TYR THR LEU SER ASP PHE LYS GLU LEU LEU          
SEQRES  13 A  320  ARG THR VAL LYS ALA THR GLY ALA PHE LEU GLY CYS ASP          
SEQRES  14 A  320  ASN SER GLY GLU TYR LEU ASN LEU ALA VAL GLU MSE GLY          
SEQRES  15 A  320  VAL ASP PHE ILE LYS PRO ASN GLU ASP GLU VAL ILE ALA          
SEQRES  16 A  320  ILE LEU ASP GLU LYS THR ASN SER LEU GLU GLU ASN ILE          
SEQRES  17 A  320  ARG THR LEU ALA GLU LYS ILE PRO TYR LEU VAL VAL SER          
SEQRES  18 A  320  LEU GLY ALA LYS GLY SER ILE CYS ALA HIS ASN GLY LYS          
SEQRES  19 A  320  LEU TYR GLN VAL ILE PRO PRO LYS VAL GLN GLU ARG ASN          
SEQRES  20 A  320  ASP THR GLY ALA GLY ASP VAL PHE VAL GLY ALA PHE ILE          
SEQRES  21 A  320  ALA GLY LEU ALA MSE ASN MSE PRO ILE THR GLU THR LEU          
SEQRES  22 A  320  LYS VAL ALA THR GLY CYS SER ALA SER LYS VAL MSE GLN          
SEQRES  23 A  320  GLN ASP SER SER SER PHE ASP LEU GLU ALA ALA GLY LYS          
SEQRES  24 A  320  LEU LYS ASN GLN VAL SER ILE ILE GLN LEU GLU GLU ARG          
SEQRES  25 A  320  GLU GLY HIS HIS HIS HIS HIS HIS                              
MODRES 3IE7 MSE A  105  MET  SELENOMETHIONINE                                   
MODRES 3IE7 MSE A  134  MET  SELENOMETHIONINE                                   
MODRES 3IE7 MSE A  179  MET  SELENOMETHIONINE                                   
MODRES 3IE7 MSE A  263  MET  SELENOMETHIONINE                                   
MODRES 3IE7 MSE A  265  MET  SELENOMETHIONINE                                   
MODRES 3IE7 MSE A  283  MET  SELENOMETHIONINE                                   
HET    MSE  A 105       8                                                       
HET    MSE  A 134       8                                                       
HET    MSE  A 179       8                                                       
HET    MSE  A 263       8                                                       
HET    MSE  A 265       8                                                       
HET    MSE  A 283       8                                                       
HET    ATP  A 900      31                                                       
HET     MG  A   1       1                                                       
HET     MG  A 319       1                                                       
HET     MG  A 320       1                                                       
HET    GOL  A 501       6                                                       
HETNAM     MSE SELENOMETHIONINE                                                 
HETNAM     ATP ADENOSINE-5'-TRIPHOSPHATE                                        
HETNAM      MG MAGNESIUM ION                                                    
HETNAM     GOL GLYCEROL                                                         
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   1  MSE    6(C5 H11 N O2 SE)                                            
FORMUL   2  ATP    C10 H16 N5 O13 P3                                            
FORMUL   3   MG    3(MG 2+)                                                     
FORMUL   6  GOL    C3 H8 O3                                                     
FORMUL   7  HOH   *272(H2 O)                                                    
HELIX    1   1 GLY A   38  GLY A   51  1                                  14    
HELIX    2   2 ASN A   64  LYS A   75  1                                  12    
HELIX    3   3 SER A  114  VAL A  129  1                                  16    
HELIX    4   4 THR A  146  GLY A  161  1                                  16    
HELIX    5   5 SER A  169  GLY A  180  1                                  12    
HELIX    6   6 ASP A  189  LEU A  195  5                                   7    
HELIX    7   7 SER A  201  ALA A  210  1                                  10    
HELIX    8   8 GLY A  221  LYS A  223  5                                   3    
HELIX    9   9 GLY A  248  MSE A  263  1                                  16    
HELIX   10  10 PRO A  266  MSE A  283  1                                  18    
HELIX   11  11 ASP A  291  LYS A  299  1                                   9    
HELIX   12  12 ASN A  300  VAL A  302  5                                   3    
SHEET    1   A10 LEU A  82  GLU A  84  0                                        
SHEET    2   A10 ASN A  54  GLY A  61  1  N  GLY A  58   O  LEU A  82           
SHEET    3   A10 ILE A   2  THR A   6  1  N  THR A   4   O  LEU A  57           
SHEET    4   A10 MSE A 134  ALA A 138  1  O  VAL A 136   N  TYR A   3           
SHEET    5   A10 PHE A 163  ASP A 167  1  O  GLY A 165   N  VAL A 135           
SHEET    6   A10 PHE A 183  ILE A 184  1  O  PHE A 183   N  CYS A 166           
SHEET    7   A10 TYR A 215  SER A 219  1  O  VAL A 217   N  ILE A 184           
SHEET    8   A10 SER A 225  HIS A 229 -1  O  ALA A 228   N  LEU A 216           
SHEET    9   A10 LYS A 232  ILE A 237 -1  O  VAL A 236   N  SER A 225           
SHEET   10   A10 SER A 303  GLN A 306 -1  O  ILE A 305   N  GLN A 235           
SHEET    1   B 4 LYS A  31  GLY A  37  0                                        
SHEET    2   B 4 ALA A  10  ILE A  17 -1  N  ALA A  10   O  GLY A  37           
SHEET    3   B 4 ARG A  90  SER A  97  1  O  VAL A  94   N  LEU A  15           
SHEET    4   B 4 THR A 104  PRO A 107 -1  O  ILE A 106   N  PHE A  93           
LINK         C   THR A 104                 N   MSE A 105     1555   1555  1.32  
LINK         C   MSE A 105                 N   ILE A 106     1555   1555  1.33  
LINK         C   ASP A 133                 N   MSE A 134     1555   1555  1.33  
LINK         C   MSE A 134                 N   VAL A 135     1555   1555  1.33  
LINK         C   GLU A 178                 N   MSE A 179     1555   1555  1.33  
LINK         C   MSE A 179                 N   GLY A 180     1555   1555  1.33  
LINK         C   ALA A 262                 N   MSE A 263     1555   1555  1.33  
LINK         C   MSE A 263                 N   ASN A 264     1555   1555  1.33  
LINK         C   ASN A 264                 N   MSE A 265     1555   1555  1.33  
LINK         C   MSE A 265                 N   PRO A 266     1555   1555  1.34  
LINK         C   VAL A 282                 N   MSE A 283     1555   1555  1.33  
LINK         C   MSE A 283                 N   GLN A 284     1555   1555  1.33  
LINK        MG    MG A   1                 O   HOH A 504     1555   1555  2.09  
LINK        MG    MG A   1                 O   HOH A 505     1555   1555  2.12  
LINK        MG    MG A   1                 O1B ATP A 900     1555   1555  2.14  
LINK        MG    MG A   1                 O1A ATP A 900     1555   1555  2.24  
LINK        MG    MG A 319                 O   HOH A 380     1555   1555  2.12  
LINK        MG    MG A 319                 O   HOH A 500     1555   1555  2.03  
LINK        MG    MG A 319                 O   HOH A 502     1555   1555  2.05  
LINK        MG    MG A 319                 O   HOH A 503     1555   1555  2.13  
LINK        MG    MG A 319                 O1G ATP A 900     1555   1555  2.27  
LINK        MG    MG A 319                 O2B ATP A 900     1555   1555  2.08  
SITE     1 AC1 26  MG A   1  LYS A 185  ASN A 187  SER A 219                    
SITE     2 AC1 26 GLY A 221  ALA A 222  GLY A 224  GLU A 243                    
SITE     3 AC1 26 GLY A 248  ALA A 249  GLY A 250  ASP A 251                    
SITE     4 AC1 26 SER A 278  VAL A 282   MG A 319  HOH A 337                    
SITE     5 AC1 26 HOH A 350  HOH A 360  HOH A 378  HOH A 407                    
SITE     6 AC1 26 HOH A 477  HOH A 500  HOH A 503  HOH A 504                    
SITE     7 AC1 26 HOH A 505  HOH A 587                                          
SITE     1 AC2  3 HOH A 504  HOH A 505  ATP A 900                               
SITE     1 AC3  5 HOH A 380  HOH A 500  HOH A 502  HOH A 503                    
SITE     2 AC3  5 ATP A 900                                                     
SITE     1 AC4  4 GLY A  38  LYS A  39  GLY A 139  GOL A 501                    
SITE     1 AC5  8 ASP A  12  GLY A  37  GLY A  38  LYS A  39                    
SITE     2 AC5  8 HIS A  42  MSE A 105  SER A 287   MG A 320                    
CRYST1  146.108   46.244   57.762  90.00 102.08  90.00 C 1 2 1       4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.006844  0.000000  0.001465        0.00000                         
SCALE2      0.000000  0.021624  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.017704        0.00000