PDB Short entry for 3JR5 HEADER LYASE/DNA 08-SEP-09 3JR5 TITLE MUTM LESION RECOGNITION CONTROL COMPLEX WITH N174C CROSSLINKING SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA GLYCOSYLASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MUTM; COMPND 5 EC: 4.2.99.18; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)- COMPND 10 3'); COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*(OGX) COMPND 15 P*AP*GP*TP*CP*TP*AP*CP*C)-3'); COMPND 16 CHAIN: C; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_COMMON: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 4 ORGANISM_TAXID: 1422; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24B; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES KEYWDS DNA GLYCOSYLASE, DNA REPAIR, DAMAGE SEARCH, BASE EXTRUSION, DISULFIDE KEYWDS 2 CROSSLINKING, DNA DAMAGE, DNA-BINDING, GLYCOSIDASE, HYDROLASE, KEYWDS 3 LYASE, METAL-BINDING, MULTIFUNCTIONAL ENZYME, ZINC-FINGER, LYASE-DNA KEYWDS 4 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.QI,M.C.SPONG,G.L.VERDINE REVDAT 7 06-SEP-23 3JR5 1 REMARK REVDAT 6 13-OCT-21 3JR5 1 REMARK SEQADV LINK REVDAT 5 01-NOV-17 3JR5 1 REMARK REVDAT 4 13-JUL-11 3JR5 1 VERSN REVDAT 3 19-JAN-10 3JR5 1 JRNL REVDAT 2 24-NOV-09 3JR5 1 JRNL REVDAT 1 03-NOV-09 3JR5 0 JRNL AUTH Y.QI,M.C.SPONG,K.NAM,M.KARPLUS,G.L.VERDINE JRNL TITL ENTRAPMENT AND STRUCTURE OF AN EXTRAHELICAL GUANINE JRNL TITL 2 ATTEMPTING TO ENTER THE ACTIVE SITE OF A BACTERIAL DNA JRNL TITL 3 GLYCOSYLASE, MUTM. JRNL REF J.BIOL.CHEM. V. 285 1468 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 19889642 JRNL DOI 10.1074/JBC.M109.069799 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 46049 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2306 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.0370 - 4.2910 0.99 3158 145 0.1680 0.1740 REMARK 3 2 4.2910 - 3.4070 1.00 2965 176 0.1490 0.1650 REMARK 3 3 3.4070 - 2.9770 1.00 2969 153 0.1670 0.1730 REMARK 3 4 2.9770 - 2.7040 0.99 2928 161 0.1740 0.1960 REMARK 3 5 2.7040 - 2.5110 0.98 2850 172 0.1700 0.1890 REMARK 3 6 2.5110 - 2.3630 0.99 2890 167 0.1630 0.2140 REMARK 3 7 2.3630 - 2.2440 0.98 2851 147 0.1570 0.1730 REMARK 3 8 2.2440 - 2.1470 0.97 2835 148 0.1530 0.1690 REMARK 3 9 2.1470 - 2.0640 0.97 2832 141 0.1470 0.1490 REMARK 3 10 2.0640 - 1.9930 0.95 2777 146 0.1480 0.1680 REMARK 3 11 1.9930 - 1.9310 0.94 2752 137 0.1470 0.1980 REMARK 3 12 1.9310 - 1.8750 0.93 2663 150 0.1560 0.1970 REMARK 3 13 1.8750 - 1.8260 0.90 2631 131 0.1620 0.1950 REMARK 3 14 1.8260 - 1.7810 0.87 2544 125 0.1630 0.2030 REMARK 3 15 1.7810 - 1.7410 0.84 2413 132 0.1720 0.1780 REMARK 3 16 1.7410 - 1.7040 0.58 1685 75 0.1820 0.2040 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 49.96 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.15100 REMARK 3 B22 (A**2) : 1.90600 REMARK 3 B33 (A**2) : -4.05700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2855 REMARK 3 ANGLE : 1.175 3983 REMARK 3 CHIRALITY : 0.075 442 REMARK 3 PLANARITY : 0.005 415 REMARK 3 DIHEDRAL : 19.179 1106 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -14.3493 51.9334 17.2723 REMARK 3 T TENSOR REMARK 3 T11: 0.0304 T22: 0.0331 REMARK 3 T33: 0.0418 T12: 0.0053 REMARK 3 T13: 0.0067 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 0.0304 L22: 0.4193 REMARK 3 L33: 0.7015 L12: -0.0517 REMARK 3 L13: 0.0591 L23: -0.4480 REMARK 3 S TENSOR REMARK 3 S11: 0.0054 S12: -0.0289 S13: -0.0168 REMARK 3 S21: -0.0618 S22: -0.0420 S23: -0.0160 REMARK 3 S31: 0.0469 S32: 0.0255 S33: 0.0310 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B OR CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): -7.7669 58.5981 33.4798 REMARK 3 T TENSOR REMARK 3 T11: 0.0441 T22: 0.1617 REMARK 3 T33: 0.0591 T12: 0.0654 REMARK 3 T13: -0.0065 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.5850 L22: 0.7831 REMARK 3 L33: 0.2377 L12: -0.2610 REMARK 3 L13: 0.6785 L23: -0.4188 REMARK 3 S TENSOR REMARK 3 S11: -0.2775 S12: -0.1265 S13: 0.0139 REMARK 3 S21: 0.4391 S22: 0.1820 S23: -0.2410 REMARK 3 S31: -0.1116 S32: 0.0712 S33: 0.0159 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3JR5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000055054. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.290 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48192 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.49200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1R2Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8K, SODIUM CACODYLATE, GLYCEROL, REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.67150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.24100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.68850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.24100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.67150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.68850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC B 16 REMARK 465 DT C 1 REMARK 465 DG C 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 133 CG CD OE1 OE2 REMARK 470 LYS A 156 CD CE NZ REMARK 470 LYS A 198 CD CE NZ REMARK 470 GLU A 201 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG B 6 O4' - C1' - N9 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 3 -169.64 -108.42 REMARK 500 LEU A 66 -139.19 -104.53 REMARK 500 ASP A 67 -72.50 -88.13 REMARK 500 ARG A 76 -124.00 50.65 REMARK 500 ASP A 110 95.57 -164.09 REMARK 500 ARG A 223 -66.13 -142.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 300 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 249 SG REMARK 620 2 CYS A 252 SG 108.6 REMARK 620 3 CYS A 269 SG 110.5 98.2 REMARK 620 4 CYS A 272 SG 111.2 112.2 115.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3JR4 RELATED DB: PDB REMARK 900 MUTM INTERROGATING AN EXTRAHELICAL G, TRAPPED WITH THE SAME REMARK 900 CROSSLINKING PAIR DBREF 3JR5 A 2 274 UNP P84131 P84131_BACST 2 274 DBREF 3JR5 B 1 16 PDB 3JR5 3JR5 1 16 DBREF 3JR5 C 1 16 PDB 3JR5 3JR5 1 16 SEQADV 3JR5 CYS A 174 UNP P84131 ASN 174 ENGINEERED MUTATION SEQRES 1 A 273 PRO GLN LEU PRO GLU VAL GLU THR ILE ARG ARG THR LEU SEQRES 2 A 273 LEU PRO LEU ILE VAL GLY LYS THR ILE GLU ASP VAL ARG SEQRES 3 A 273 ILE PHE TRP PRO ASN ILE ILE ARG HIS PRO ARG ASP SER SEQRES 4 A 273 GLU ALA PHE ALA ALA ARG MET ILE GLY GLN THR VAL ARG SEQRES 5 A 273 GLY LEU GLU ARG ARG GLY LYS PHE LEU LYS PHE LEU LEU SEQRES 6 A 273 ASP ARG ASP ALA LEU ILE SER HIS LEU ARG MET GLU GLY SEQRES 7 A 273 ARG TYR ALA VAL ALA SER ALA LEU GLU PRO LEU GLU PRO SEQRES 8 A 273 HIS THR HIS VAL VAL PHE CYS PHE THR ASP GLY SER GLU SEQRES 9 A 273 LEU ARG TYR ARG ASP VAL ARG LYS PHE GLY THR MET HIS SEQRES 10 A 273 VAL TYR ALA LYS GLU GLU ALA ASP ARG ARG PRO PRO LEU SEQRES 11 A 273 ALA GLU LEU GLY PRO GLU PRO LEU SER PRO ALA PHE SER SEQRES 12 A 273 PRO ALA VAL LEU ALA GLU ARG ALA VAL LYS THR LYS ARG SEQRES 13 A 273 SER VAL LYS ALA LEU LEU LEU ASP GLN THR VAL VAL ALA SEQRES 14 A 273 GLY PHE GLY CYS ILE TYR VAL ASP GLU SER LEU PHE ARG SEQRES 15 A 273 ALA GLY ILE LEU PRO GLY ARG PRO ALA ALA SER LEU SER SEQRES 16 A 273 SER LYS GLU ILE GLU ARG LEU HIS GLU GLU MET VAL ALA SEQRES 17 A 273 THR ILE GLY GLU ALA VAL MET LYS GLY GLY SER THR VAL SEQRES 18 A 273 ARG THR TYR VAL ASN THR GLN GLY GLU ALA GLY THR PHE SEQRES 19 A 273 GLN HIS HIS LEU TYR VAL TYR GLY ARG GLN GLY ASN PRO SEQRES 20 A 273 CYS LYS ARG CYS GLY THR PRO ILE GLU LYS THR VAL VAL SEQRES 21 A 273 ALA GLY ARG GLY THR HIS TYR CYS PRO ARG CYS GLN ARG SEQRES 1 B 16 DA DG DG DT DA DG DA DC DT DC DG DG DA SEQRES 2 B 16 DC DG DC SEQRES 1 C 16 DT DG DC DG DT DC DC OGX DA DG DT DC DT SEQRES 2 C 16 DA DC DC MODRES 3JR5 OGX C 8 DG HET OGX C 8 26 HET ZN A 300 1 HET GOL A 1 6 HETNAM OGX 2'-DEOXY-5'-O-{(S)-HYDROXY[(2-SULFANYLETHYL) HETNAM 2 OGX AMINO]PHOSPHORYL}-8-OXOGUANOSINE HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 OGX C12 H19 N6 O7 P S FORMUL 4 ZN ZN 2+ FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *295(H2 O) HELIX 1 1 GLN A 3 VAL A 19 1 17 HELIX 2 2 TRP A 30 ASN A 32 5 3 HELIX 3 3 ASP A 39 ILE A 48 1 10 HELIX 4 4 LYS A 122 ASP A 126 1 5 HELIX 5 5 SER A 144 VAL A 153 1 10 HELIX 6 6 SER A 158 ASP A 165 1 8 HELIX 7 7 GLY A 173 GLY A 185 1 13 HELIX 8 8 PRO A 191 LEU A 195 5 5 HELIX 9 9 SER A 196 LYS A 217 1 22 HELIX 10 10 THR A 234 LEU A 239 5 6 SHEET 1 A 4 ILE A 23 ILE A 28 0 SHEET 2 A 4 THR A 94 PHE A 100 -1 O CYS A 99 N GLU A 24 SHEET 3 A 4 SER A 104 ARG A 109 -1 O TYR A 108 N VAL A 96 SHEET 4 A 4 ARG A 80 SER A 85 -1 N ALA A 82 O ARG A 107 SHEET 1 B 5 ILE A 34 HIS A 36 0 SHEET 2 B 5 THR A 116 ALA A 121 1 O MET A 117 N ARG A 35 SHEET 3 B 5 ASP A 69 HIS A 74 -1 N ILE A 72 O HIS A 118 SHEET 4 B 5 PHE A 61 LEU A 65 -1 N PHE A 64 O LEU A 71 SHEET 5 B 5 GLY A 54 ARG A 58 -1 N GLU A 56 O LYS A 63 SHEET 1 C 2 GLU A 257 VAL A 261 0 SHEET 2 C 2 ARG A 264 TYR A 268 -1 O TYR A 268 N GLU A 257 LINK SG CYS A 174 S OGX C 8 1555 1555 2.03 LINK O3' DC C 7 P OGX C 8 1555 1555 1.59 LINK O3' OGX C 8 P DA C 9 1555 1555 1.60 LINK SG CYS A 249 ZN ZN A 300 1555 1555 2.36 LINK SG CYS A 252 ZN ZN A 300 1555 1555 2.34 LINK SG CYS A 269 ZN ZN A 300 1555 1555 2.37 LINK SG CYS A 272 ZN ZN A 300 1555 1555 2.32 CISPEP 1 HIS A 36 PRO A 37 0 -10.10 CISPEP 2 PRO A 129 PRO A 130 0 4.06 SITE 1 AC1 4 CYS A 249 CYS A 252 CYS A 269 CYS A 272 SITE 1 AC2 8 HIS A 74 ARG A 76 THR A 116 HIS A 118 SITE 2 AC2 8 PRO A 130 HOH A 288 HOH A 435 DT C 11 CRYST1 45.343 95.377 102.482 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022054 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010485 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009758 0.00000