PDB Short entry for 3JUO HEADER BIOSYNTHETIC PROTEIN 15-SEP-09 3JUO TITLE CRYSTAL STRUCTURE OF PHZA/B FROM BURKHOLDERIA CEPACIA R18194 IN TITLE 2 COMPLEX WITH (R)-5-BROMO-2-(PIPERIDIN-3-YLAMINO)BENZOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENAZINE BIOSYNTHESIS PROTEIN A/B; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA SP.; SOURCE 3 ORGANISM_COMMON: BURKHOLDERIA CEPACIA (STRAIN ATCC 17760 / NCIB 9086 SOURCE 4 / R18194); SOURCE 5 ORGANISM_TAXID: 269483; SOURCE 6 STRAIN: 383; SOURCE 7 GENE: BCEP18194_B1568; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3) PLYSS; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS CHIRALITY, DRUG DESIGN, PHENAZINE BIOSYNTHESIS, MEDICINAL CHEMISTRY, KEYWDS 2 INHIBITOR, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.MENTEL,I.H.JAIN,R.BREINBAUER,W.BLANKENFELDT REVDAT 4 21-FEB-24 3JUO 1 REMARK SEQADV REVDAT 3 13-JUL-11 3JUO 1 VERSN REVDAT 2 17-NOV-09 3JUO 1 JRNL REVDAT 1 29-SEP-09 3JUO 0 JRNL AUTH M.MENTEL,W.BLANKENFELDT,R.BREINBAUER JRNL TITL THE ACTIVE SITE OF AN ENZYME CAN HOST BOTH ENANTIOMERS OF A JRNL TITL 2 RACEMIC LIGAND SIMULTANEOUSLY JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 48 9084 2009 JRNL REFN ISSN 1433-7851 JRNL PMID 19876985 JRNL DOI 10.1002/ANIE.200902997 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.G.AHUJA,P.JANNING,A.GRAEBSCH,R.BREINBAUER,W.HILLER, REMARK 1 AUTH 2 B.COSTISELLA,L.S.THOMASHOW,D.V.MAVRODI,W.BLANKENFELDT REMARK 1 TITL PHZA/B CATALYZES THE FORMATION OF THE TRICYCLE IN PHENAZINE REMARK 1 TITL 2 BIOSYNTHESIS REMARK 1 REF J.AM.CHEM.SOC. V. 130 17053 2008 REMARK 1 REFN ISSN 0002-7863 REMARK 1 PMID 19053436 REMARK 1 DOI 10.1021/JA806325K REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 20466 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1042 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1404 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.2480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2588 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 50.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.75000 REMARK 3 B22 (A**2) : 1.75000 REMARK 3 B33 (A**2) : -2.62000 REMARK 3 B12 (A**2) : 0.87000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.226 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.186 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.011 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2709 ; 0.023 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1927 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3668 ; 1.808 ; 1.924 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4556 ; 0.926 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 313 ; 6.447 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;36.849 ;22.628 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 429 ;16.421 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;20.460 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 356 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3074 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 636 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1555 ; 1.075 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 637 ; 0.295 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2500 ; 2.038 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1154 ; 3.328 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1167 ; 5.339 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 165 REMARK 3 RESIDUE RANGE : A 500 A 500 REMARK 3 RESIDUE RANGE : A 166 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): 42.8383 0.8170 86.1834 REMARK 3 T TENSOR REMARK 3 T11: 0.0329 T22: 0.0526 REMARK 3 T33: 0.1247 T12: 0.0126 REMARK 3 T13: -0.0269 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 2.0558 L22: 2.6863 REMARK 3 L33: 4.0863 L12: -0.0104 REMARK 3 L13: -0.5633 L23: -1.5833 REMARK 3 S TENSOR REMARK 3 S11: 0.1075 S12: -0.0412 S13: 0.0511 REMARK 3 S21: 0.0896 S22: -0.1957 S23: -0.3880 REMARK 3 S31: 0.1112 S32: 0.1392 S33: 0.0882 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 8 B 164 REMARK 3 RESIDUE RANGE : B 500 B 500 REMARK 3 RESIDUE RANGE : B 166 B 203 REMARK 3 ORIGIN FOR THE GROUP (A): 30.4046 10.9447 72.8840 REMARK 3 T TENSOR REMARK 3 T11: 0.0364 T22: 0.1424 REMARK 3 T33: 0.0802 T12: 0.0085 REMARK 3 T13: -0.0052 T23: 0.0586 REMARK 3 L TENSOR REMARK 3 L11: 1.8151 L22: 3.3348 REMARK 3 L33: 3.1908 L12: -0.2264 REMARK 3 L13: 0.5781 L23: -1.6088 REMARK 3 S TENSOR REMARK 3 S11: -0.0361 S12: 0.1464 S13: 0.0987 REMARK 3 S21: -0.2446 S22: 0.2636 S23: 0.2166 REMARK 3 S31: 0.0434 S32: -0.4936 S33: -0.2275 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3JUO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000055181. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 - 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97886 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20466 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 19.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16-20% (W/V) PEG3350, 0.2 M NH4OAC, REMARK 280 0.1 M BIS-TRIS PH 6.1-6.7; COMPLEX PREPARED BY OVERNIGHT SOAKING REMARK 280 IN MOTHER LIQUOR CONTAINING 5 MM (R)-5-BROMO-2-(PIPERIDIN-3- REMARK 280 YLAMINO)BENZOIC ACID, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 284K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.26000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.63000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.63000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 107.26000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 VAL A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 LEU A 7 REMARK 465 GLU A 8 REMARK 465 ASN A 9 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 465 VAL B 4 REMARK 465 GLU B 5 REMARK 465 SER B 6 REMARK 465 LEU B 7 REMARK 465 SER B 165 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 79 CG CD OE1 NE2 REMARK 470 GLN B 21 CG CD OE1 NE2 REMARK 470 LYS B 25 CG CD CE NZ REMARK 470 GLU B 68 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 105 O HOH A 186 2.05 REMARK 500 O HOH B 198 O HOH B 199 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA B 109 CA ALA B 109 CB 0.131 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 34 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 160 77.92 -111.76 REMARK 500 ARG B 160 69.35 -119.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AJD A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AJD B 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3JUM RELATED DB: PDB REMARK 900 RELATED ID: 3JUN RELATED DB: PDB REMARK 900 RELATED ID: 3JUP RELATED DB: PDB REMARK 900 RELATED ID: 3JUQ RELATED DB: PDB REMARK 900 RELATED ID: 3BO4 RELATED DB: PDB REMARK 900 RELATED ID: 3CNM RELATED DB: PDB REMARK 900 RELATED ID: 3DZL RELATED DB: PDB REMARK 900 RELATED ID: 3B4P RELATED DB: PDB REMARK 900 RELATED ID: 3EX9 RELATED DB: PDB DBREF 3JUO A 1 165 UNP Q396C9 Q396C9_BURS3 1 165 DBREF 3JUO B 1 165 UNP Q396C9 Q396C9_BURS3 1 165 SEQADV 3JUO MET A -19 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO GLY A -18 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO SER A -17 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO SER A -16 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS A -15 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS A -14 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS A -13 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS A -12 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS A -11 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS A -10 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO SER A -9 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO SER A -8 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO GLY A -7 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO LEU A -6 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO VAL A -5 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO PRO A -4 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO ARG A -3 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO GLY A -2 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO SER A -1 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS A 0 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO MET B -19 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO GLY B -18 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO SER B -17 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO SER B -16 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS B -15 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS B -14 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS B -13 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS B -12 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS B -11 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS B -10 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO SER B -9 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO SER B -8 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO GLY B -7 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO LEU B -6 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO VAL B -5 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO PRO B -4 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO ARG B -3 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO GLY B -2 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO SER B -1 UNP Q396C9 EXPRESSION TAG SEQADV 3JUO HIS B 0 UNP Q396C9 EXPRESSION TAG SEQRES 1 A 185 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 185 LEU VAL PRO ARG GLY SER HIS MET SER ASP VAL GLU SER SEQRES 3 A 185 LEU GLU ASN THR SER GLU ASN ARG ALA GLN VAL ALA ALA SEQRES 4 A 185 ARG GLN HIS ASN ARG LYS ILE VAL GLU GLN TYR MET HIS SEQRES 5 A 185 THR ARG GLY GLU ALA ARG LEU LYS ARG HIS LEU LEU PHE SEQRES 6 A 185 THR GLU ASP GLY VAL GLY GLY LEU TRP THR THR ASP SER SEQRES 7 A 185 GLY GLN PRO ILE ALA ILE ARG GLY ARG GLU LYS LEU GLY SEQRES 8 A 185 GLU HIS ALA VAL TRP SER LEU GLN CYS PHE PRO ASP TRP SEQRES 9 A 185 VAL TRP THR ASP ILE GLN ILE PHE GLU THR GLN ASP PRO SEQRES 10 A 185 ASN TRP PHE TRP VAL GLU CYS ARG GLY GLU GLY ALA ILE SEQRES 11 A 185 VAL PHE PRO GLY TYR PRO ARG GLY GLN TYR ARG ASN HIS SEQRES 12 A 185 PHE LEU HIS SER PHE ARG PHE GLU ASN GLY LEU ILE LYS SEQRES 13 A 185 GLU GLN ARG GLU PHE MET ASN PRO CYS GLU GLN PHE ARG SEQRES 14 A 185 SER LEU GLY ILE GLU VAL PRO GLU VAL ARG ARG ASP GLY SEQRES 15 A 185 LEU PRO SER SEQRES 1 B 185 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 185 LEU VAL PRO ARG GLY SER HIS MET SER ASP VAL GLU SER SEQRES 3 B 185 LEU GLU ASN THR SER GLU ASN ARG ALA GLN VAL ALA ALA SEQRES 4 B 185 ARG GLN HIS ASN ARG LYS ILE VAL GLU GLN TYR MET HIS SEQRES 5 B 185 THR ARG GLY GLU ALA ARG LEU LYS ARG HIS LEU LEU PHE SEQRES 6 B 185 THR GLU ASP GLY VAL GLY GLY LEU TRP THR THR ASP SER SEQRES 7 B 185 GLY GLN PRO ILE ALA ILE ARG GLY ARG GLU LYS LEU GLY SEQRES 8 B 185 GLU HIS ALA VAL TRP SER LEU GLN CYS PHE PRO ASP TRP SEQRES 9 B 185 VAL TRP THR ASP ILE GLN ILE PHE GLU THR GLN ASP PRO SEQRES 10 B 185 ASN TRP PHE TRP VAL GLU CYS ARG GLY GLU GLY ALA ILE SEQRES 11 B 185 VAL PHE PRO GLY TYR PRO ARG GLY GLN TYR ARG ASN HIS SEQRES 12 B 185 PHE LEU HIS SER PHE ARG PHE GLU ASN GLY LEU ILE LYS SEQRES 13 B 185 GLU GLN ARG GLU PHE MET ASN PRO CYS GLU GLN PHE ARG SEQRES 14 B 185 SER LEU GLY ILE GLU VAL PRO GLU VAL ARG ARG ASP GLY SEQRES 15 B 185 LEU PRO SER HET AJD A 500 17 HET AJD B 500 17 HETNAM AJD 5-BROMO-2-[(3R)-PIPERIDIN-3-YLAMINO]BENZOIC ACID FORMUL 3 AJD 2(C12 H15 BR N2 O2) FORMUL 5 HOH *77(H2 O) HELIX 1 1 THR A 10 THR A 33 1 24 HELIX 2 2 ARG A 34 LEU A 43 5 10 HELIX 3 3 GLY A 66 PHE A 81 1 16 HELIX 4 4 ASN A 143 LEU A 151 1 9 HELIX 5 5 THR B 10 THR B 33 1 24 HELIX 6 6 ARG B 34 LEU B 43 5 10 HELIX 7 7 GLY B 66 PHE B 81 1 16 HELIX 8 8 ASN B 143 LEU B 151 1 9 SHEET 1 A 6 ILE A 62 ARG A 65 0 SHEET 2 A 6 PHE A 45 LEU A 53 -1 N GLY A 51 O ILE A 64 SHEET 3 A 6 LEU A 134 MET A 142 1 O LYS A 136 N VAL A 50 SHEET 4 A 6 GLY A 118 GLU A 131 -1 N LEU A 125 O PHE A 141 SHEET 5 A 6 TRP A 99 ILE A 110 -1 N PHE A 100 O PHE A 128 SHEET 6 A 6 VAL A 85 GLU A 93 -1 N PHE A 92 O TRP A 101 SHEET 1 B 6 ILE B 62 ARG B 65 0 SHEET 2 B 6 PHE B 45 LEU B 53 -1 N LEU B 53 O ILE B 62 SHEET 3 B 6 LEU B 134 PHE B 141 1 O GLN B 138 N VAL B 50 SHEET 4 B 6 GLY B 118 GLU B 131 -1 N ARG B 129 O GLU B 137 SHEET 5 B 6 TRP B 99 ILE B 110 -1 N ILE B 110 O GLY B 118 SHEET 6 B 6 VAL B 85 GLU B 93 -1 N PHE B 92 O TRP B 101 SITE 1 AC1 8 ARG A 38 ARG A 41 LEU A 70 HIS A 73 SITE 2 AC1 8 ALA A 74 SER A 77 TRP A 84 GLU A 140 SITE 1 AC2 9 ARG B 38 ARG B 41 LEU B 70 HIS B 73 SITE 2 AC2 9 ALA B 74 SER B 77 PHE B 81 TRP B 84 SITE 3 AC2 9 GLU B 140 CRYST1 64.600 64.600 160.890 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015480 0.008937 0.000000 0.00000 SCALE2 0.000000 0.017875 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006215 0.00000