PDB Short entry for 3JW8 HEADER HYDROLASE 18-SEP-09 3JW8 TITLE CRYSTAL STRUCTURE OF HUMAN MONO-GLYCERIDE LIPASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MGLL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MONOGLYCERIDE LIPASE, ISOFORM CRA_B, CDNA, FLJ96595, HOMO COMPND 5 SAPIENS MONOGLYCERIDE LIPASE (MGLL), MRNA; COMPND 6 EC: 3.1.1.23; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MGLL, HCG_40840; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS ALPHA-BETA HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.BERTRAND,F.AUGE,J.HOUTMANN,A.RAK,F.VALLEE,V.MIKOL,P.F.BERNE, AUTHOR 2 N.MICHOT,D.CHEURET,C.HOORNAERT,M.MATHIEU REVDAT 2 11-AUG-10 3JW8 1 JRNL REVDAT 1 26-JAN-10 3JW8 0 JRNL AUTH T.BERTRAND,F.AUGE,J.HOUTMANN,A.RAK,F.VALLEE,V.MIKOL, JRNL AUTH 2 P.F.BERNE,N.MICHOT,D.CHEURET,C.HOORNAERT,M.MATHIEU JRNL TITL STRUCTURAL BASIS FOR HUMAN MONOGLYCERIDE LIPASE INHIBITION. JRNL REF J.MOL.BIOL. V. 396 663 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 19962385 JRNL DOI 10.1016/J.JMB.2009.11.060 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.9.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 44314 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2230 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.15 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.04 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3037 REMARK 3 BIN R VALUE (WORKING SET) : 0.1522 REMARK 3 BIN FREE R VALUE : 0.2088 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.39 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 173 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4404 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 532 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.24510 REMARK 3 B22 (A**2) : 0.79650 REMARK 3 B33 (A**2) : -0.55140 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.17 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : NULL ; NULL ; NULL REMARK 3 BOND ANGLES : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : NULL ; NULL ; NULL REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3JW8 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-SEP-09. REMARK 100 THE RCSB ID CODE IS RCSB055237. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797, 0.9799, 1.000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44315 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 73.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.14900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM MES, 40% MPD, PH 6.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.29400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.15550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 70.28350 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.29400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.15550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.28350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.29400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 63.15550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.28350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 43.29400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 63.15550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 70.28350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -280.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -221.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 126.31100 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 126.31100 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 GLU A 2 REMARK 465 THR A 3 REMARK 465 GLY A 4 REMARK 465 PRO A 5 REMARK 465 GLU A 6 REMARK 465 ASP A 7 REMARK 465 PRO A 8 REMARK 465 SER A 9 REMARK 465 SER A 10 REMARK 465 MSE A 11 REMARK 465 PRO A 12 REMARK 465 GLU A 13 REMARK 465 GLU A 14 REMARK 465 SER A 15 REMARK 465 THR A 306 REMARK 465 ALA A 307 REMARK 465 GLY A 308 REMARK 465 THR A 309 REMARK 465 ALA A 310 REMARK 465 SER A 311 REMARK 465 PRO A 312 REMARK 465 PRO A 313 REMARK 465 MSE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 GLU B 2 REMARK 465 THR B 3 REMARK 465 GLY B 4 REMARK 465 PRO B 5 REMARK 465 GLU B 6 REMARK 465 ASP B 7 REMARK 465 PRO B 8 REMARK 465 SER B 9 REMARK 465 SER B 10 REMARK 465 MSE B 11 REMARK 465 PRO B 12 REMARK 465 GLU B 13 REMARK 465 GLU B 14 REMARK 465 SER B 15 REMARK 465 SER B 16 REMARK 465 PRO B 17 REMARK 465 ARG B 18 REMARK 465 ARG B 19 REMARK 465 THR B 20 REMARK 465 PRO B 21 REMARK 465 GLN B 22 REMARK 465 SER B 23 REMARK 465 ILE B 24 REMARK 465 PRO B 25 REMARK 465 TYR B 26 REMARK 465 GLN B 27 REMARK 465 THR B 306 REMARK 465 ALA B 307 REMARK 465 GLY B 308 REMARK 465 THR B 309 REMARK 465 ALA B 310 REMARK 465 SER B 311 REMARK 465 PRO B 312 REMARK 465 PRO B 313 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 97 CD - NE - CZ ANGL. DEV. = 8.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 63 -153.88 -103.94 REMARK 500 SER A 132 -129.83 62.56 REMARK 500 SER A 156 62.94 38.62 REMARK 500 VAL A 159 -33.58 -132.07 REMARK 500 TYR A 278 -152.83 -89.36 REMARK 500 GLU A 284 -164.31 -102.72 REMARK 500 GLU B 63 -154.16 -106.27 REMARK 500 SER B 132 -128.56 60.29 REMARK 500 SER B 156 65.56 29.20 REMARK 500 TYR B 278 -153.91 -88.97 REMARK 500 GLU B 284 -166.15 -100.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LEU B 160 23.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 549 DISTANCE = 7.15 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 831 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 866 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 886 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD B 812 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 830 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 865 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3JWE RELATED DB: PDB DBREF 3JW8 A 1 313 UNP Q6IBG9 Q6IBG9_HUMAN 1 313 DBREF 3JW8 B 1 313 UNP Q6IBG9 Q6IBG9_HUMAN 1 313 SEQADV 3JW8 MSE A -6 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS A -5 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS A -4 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS A -3 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS A -2 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS A -1 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS A 0 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 MSE B -6 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS B -5 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS B -4 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS B -3 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS B -2 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS B -1 UNP Q6IBG9 EXPRESSION TAG SEQADV 3JW8 HIS B 0 UNP Q6IBG9 EXPRESSION TAG SEQRES 1 A 320 MSE HIS HIS HIS HIS HIS HIS MSE GLU THR GLY PRO GLU SEQRES 2 A 320 ASP PRO SER SER MSE PRO GLU GLU SER SER PRO ARG ARG SEQRES 3 A 320 THR PRO GLN SER ILE PRO TYR GLN ASP LEU PRO HIS LEU SEQRES 4 A 320 VAL ASN ALA ASP GLY GLN TYR LEU PHE CYS ARG TYR TRP SEQRES 5 A 320 LYS PRO THR GLY THR PRO LYS ALA LEU ILE PHE VAL SER SEQRES 6 A 320 HIS GLY ALA GLY GLU HIS SER GLY ARG TYR GLU GLU LEU SEQRES 7 A 320 ALA ARG MSE LEU MSE GLY LEU ASP LEU LEU VAL PHE ALA SEQRES 8 A 320 HIS ASP HIS VAL GLY HIS GLY GLN SER GLU GLY GLU ARG SEQRES 9 A 320 MSE VAL VAL SER ASP PHE HIS VAL PHE VAL ARG ASP VAL SEQRES 10 A 320 LEU GLN HIS VAL ASP SER MSE GLN LYS ASP TYR PRO GLY SEQRES 11 A 320 LEU PRO VAL PHE LEU LEU GLY HIS SER MSE GLY GLY ALA SEQRES 12 A 320 ILE ALA ILE LEU THR ALA ALA GLU ARG PRO GLY HIS PHE SEQRES 13 A 320 ALA GLY MSE VAL LEU ILE SER PRO LEU VAL LEU ALA ASN SEQRES 14 A 320 PRO GLU SER ALA THR THR PHE LYS VAL LEU ALA ALA LYS SEQRES 15 A 320 VAL LEU ASN LEU VAL LEU PRO ASN LEU SER LEU GLY PRO SEQRES 16 A 320 ILE ASP SER SER VAL LEU SER ARG ASN LYS THR GLU VAL SEQRES 17 A 320 ASP ILE TYR ASN SER ASP PRO LEU ILE CYS ARG ALA GLY SEQRES 18 A 320 LEU LYS VAL CYS PHE GLY ILE GLN LEU LEU ASN ALA VAL SEQRES 19 A 320 SER ARG VAL GLU ARG ALA LEU PRO LYS LEU THR VAL PRO SEQRES 20 A 320 PHE LEU LEU LEU GLN GLY SER ALA ASP ARG LEU CYS ASP SEQRES 21 A 320 SER LYS GLY ALA TYR LEU LEU MSE GLU LEU ALA LYS SER SEQRES 22 A 320 GLN ASP LYS THR LEU LYS ILE TYR GLU GLY ALA TYR HIS SEQRES 23 A 320 VAL LEU HIS LYS GLU LEU PRO GLU VAL THR ASN SER VAL SEQRES 24 A 320 PHE HIS GLU ILE ASN MSE TRP VAL SER GLN ARG THR ALA SEQRES 25 A 320 THR ALA GLY THR ALA SER PRO PRO SEQRES 1 B 320 MSE HIS HIS HIS HIS HIS HIS MSE GLU THR GLY PRO GLU SEQRES 2 B 320 ASP PRO SER SER MSE PRO GLU GLU SER SER PRO ARG ARG SEQRES 3 B 320 THR PRO GLN SER ILE PRO TYR GLN ASP LEU PRO HIS LEU SEQRES 4 B 320 VAL ASN ALA ASP GLY GLN TYR LEU PHE CYS ARG TYR TRP SEQRES 5 B 320 LYS PRO THR GLY THR PRO LYS ALA LEU ILE PHE VAL SER SEQRES 6 B 320 HIS GLY ALA GLY GLU HIS SER GLY ARG TYR GLU GLU LEU SEQRES 7 B 320 ALA ARG MSE LEU MSE GLY LEU ASP LEU LEU VAL PHE ALA SEQRES 8 B 320 HIS ASP HIS VAL GLY HIS GLY GLN SER GLU GLY GLU ARG SEQRES 9 B 320 MSE VAL VAL SER ASP PHE HIS VAL PHE VAL ARG ASP VAL SEQRES 10 B 320 LEU GLN HIS VAL ASP SER MSE GLN LYS ASP TYR PRO GLY SEQRES 11 B 320 LEU PRO VAL PHE LEU LEU GLY HIS SER MSE GLY GLY ALA SEQRES 12 B 320 ILE ALA ILE LEU THR ALA ALA GLU ARG PRO GLY HIS PHE SEQRES 13 B 320 ALA GLY MSE VAL LEU ILE SER PRO LEU VAL LEU ALA ASN SEQRES 14 B 320 PRO GLU SER ALA THR THR PHE LYS VAL LEU ALA ALA LYS SEQRES 15 B 320 VAL LEU ASN LEU VAL LEU PRO ASN LEU SER LEU GLY PRO SEQRES 16 B 320 ILE ASP SER SER VAL LEU SER ARG ASN LYS THR GLU VAL SEQRES 17 B 320 ASP ILE TYR ASN SER ASP PRO LEU ILE CYS ARG ALA GLY SEQRES 18 B 320 LEU LYS VAL CYS PHE GLY ILE GLN LEU LEU ASN ALA VAL SEQRES 19 B 320 SER ARG VAL GLU ARG ALA LEU PRO LYS LEU THR VAL PRO SEQRES 20 B 320 PHE LEU LEU LEU GLN GLY SER ALA ASP ARG LEU CYS ASP SEQRES 21 B 320 SER LYS GLY ALA TYR LEU LEU MSE GLU LEU ALA LYS SER SEQRES 22 B 320 GLN ASP LYS THR LEU LYS ILE TYR GLU GLY ALA TYR HIS SEQRES 23 B 320 VAL LEU HIS LYS GLU LEU PRO GLU VAL THR ASN SER VAL SEQRES 24 B 320 PHE HIS GLU ILE ASN MSE TRP VAL SER GLN ARG THR ALA SEQRES 25 B 320 THR ALA GLY THR ALA SER PRO PRO MODRES 3JW8 MSE A 74 MET SELENOMETHIONINE MODRES 3JW8 MSE A 76 MET SELENOMETHIONINE MODRES 3JW8 MSE A 98 MET SELENOMETHIONINE MODRES 3JW8 MSE A 117 MET SELENOMETHIONINE MODRES 3JW8 MSE A 133 MET SELENOMETHIONINE MODRES 3JW8 MSE A 152 MET SELENOMETHIONINE MODRES 3JW8 MSE A 261 MET SELENOMETHIONINE MODRES 3JW8 MSE A 298 MET SELENOMETHIONINE MODRES 3JW8 MSE B 74 MET SELENOMETHIONINE MODRES 3JW8 MSE B 76 MET SELENOMETHIONINE MODRES 3JW8 MSE B 98 MET SELENOMETHIONINE MODRES 3JW8 MSE B 117 MET SELENOMETHIONINE MODRES 3JW8 MSE B 133 MET SELENOMETHIONINE MODRES 3JW8 MSE B 152 MET SELENOMETHIONINE MODRES 3JW8 MSE B 261 MET SELENOMETHIONINE MODRES 3JW8 MSE B 298 MET SELENOMETHIONINE HET MSE A 74 8 HET MSE A 76 8 HET MSE A 98 8 HET MSE A 117 8 HET MSE A 133 8 HET MSE A 152 8 HET MSE A 261 8 HET MSE A 298 8 HET MSE B 74 8 HET MSE B 76 8 HET MSE B 98 8 HET MSE B 117 8 HET MSE B 133 8 HET MSE B 152 8 HET MSE B 261 8 HET MSE B 298 8 HET MPD A 707 8 HET MRD A 831 8 HET MRD A 866 8 HET MRD A 886 8 HET MPD B 812 8 HET MRD B 830 8 HET MRD B 865 8 HETNAM MSE SELENOMETHIONINE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 3 MPD 2(C6 H14 O2) FORMUL 4 MRD 5(C6 H14 O2) FORMUL 10 HOH *532(H2 O) HELIX 1 1 PRO A 25 LEU A 29 5 5 HELIX 2 2 HIS A 64 ARG A 67 5 4 HELIX 3 3 TYR A 68 LEU A 78 1 11 HELIX 4 4 PHE A 103 TYR A 121 1 19 HELIX 5 5 MSE A 133 ARG A 145 1 13 HELIX 6 6 THR A 167 LEU A 181 1 15 HELIX 7 7 ASP A 190 LEU A 194 5 5 HELIX 8 8 ASN A 197 ASP A 207 1 11 HELIX 9 9 LYS A 216 LEU A 234 1 19 HELIX 10 10 PRO A 235 LEU A 237 5 3 HELIX 11 11 ASP A 253 ALA A 264 1 12 HELIX 12 12 VAL A 280 GLU A 284 5 5 HELIX 13 13 LEU A 285 ARG A 303 1 19 HELIX 14 14 HIS B 64 ARG B 67 5 4 HELIX 15 15 TYR B 68 GLY B 77 1 10 HELIX 16 16 PHE B 103 TYR B 121 1 19 HELIX 17 17 MSE B 133 ARG B 145 1 13 HELIX 18 18 THR B 167 LEU B 181 1 15 HELIX 19 19 ASP B 190 LEU B 194 5 5 HELIX 20 20 ASN B 197 ASP B 207 1 11 HELIX 21 21 LYS B 216 LEU B 234 1 19 HELIX 22 22 PRO B 235 LEU B 237 5 3 HELIX 23 23 ASP B 253 ALA B 264 1 12 HELIX 24 24 VAL B 280 GLU B 284 5 5 HELIX 25 25 LEU B 285 ARG B 303 1 19 SHEET 1 A16 HIS A 31 VAL A 33 0 SHEET 2 A16 TYR A 39 TRP A 45 -1 O LEU A 40 N LEU A 32 SHEET 3 A16 LEU A 80 HIS A 85 -1 O VAL A 82 N TRP A 45 SHEET 4 A16 ALA A 53 SER A 58 1 N VAL A 57 O PHE A 83 SHEET 5 A16 VAL A 126 HIS A 131 1 O LEU A 129 N SER A 58 SHEET 6 A16 GLY A 151 ILE A 155 1 O ILE A 155 N GLY A 130 SHEET 7 A16 PHE A 241 GLY A 246 1 O LEU A 242 N LEU A 154 SHEET 8 A16 LYS A 269 TYR A 274 1 O THR A 270 N LEU A 243 SHEET 9 A16 LYS B 269 TYR B 274 -1 O LEU B 271 N LEU A 271 SHEET 10 A16 PHE B 241 GLY B 246 1 N LEU B 243 O THR B 270 SHEET 11 A16 GLY B 151 ILE B 155 1 N LEU B 154 O LEU B 242 SHEET 12 A16 VAL B 126 HIS B 131 1 N GLY B 130 O ILE B 155 SHEET 13 A16 ALA B 53 SER B 58 1 N SER B 58 O LEU B 129 SHEET 14 A16 LEU B 80 HIS B 85 1 O LEU B 81 N ALA B 53 SHEET 15 A16 TYR B 39 TRP B 45 -1 N TRP B 45 O VAL B 82 SHEET 16 A16 HIS B 31 VAL B 33 -1 N LEU B 32 O LEU B 40 LINK C MSE A 74 N LEU A 75 1555 1555 1.33 LINK C MSE A 76 N GLY A 77 1555 1555 1.35 LINK C MSE A 98 N VAL A 99 1555 1555 1.32 LINK C MSE A 117 N GLN A 118 1555 1555 1.33 LINK C MSE A 133 N GLY A 134 1555 1555 1.32 LINK C MSE A 152 N VAL A 153 1555 1555 1.35 LINK C MSE A 261 N GLU A 262 1555 1555 1.32 LINK C MSE A 298 N TRP A 299 1555 1555 1.35 LINK C MSE B 74 N LEU B 75 1555 1555 1.34 LINK C MSE B 76 N GLY B 77 1555 1555 1.34 LINK C MSE B 98 N VAL B 99 1555 1555 1.33 LINK C MSE B 117 N GLN B 118 1555 1555 1.36 LINK C MSE B 133 N GLY B 134 1555 1555 1.34 LINK C MSE B 152 N VAL B 153 1555 1555 1.33 LINK C MSE B 261 N GLU B 262 1555 1555 1.32 LINK C MSE B 298 N TRP B 299 1555 1555 1.35 LINK C ARG A 73 N MSE A 74 1555 1555 1.36 LINK C LEU A 75 N MSE A 76 1555 1555 1.35 LINK C ARG A 97 N MSE A 98 1555 1555 1.36 LINK C SER A 116 N MSE A 117 1555 1555 1.38 LINK C SER A 132 N MSE A 133 1555 1555 1.35 LINK C GLY A 151 N MSE A 152 1555 1555 1.33 LINK C LEU A 260 N MSE A 261 1555 1555 1.34 LINK C ASN A 297 N MSE A 298 1555 1555 1.33 LINK C ARG B 73 N MSE B 74 1555 1555 1.38 LINK C LEU B 75 N MSE B 76 1555 1555 1.32 LINK C ARG B 97 N MSE B 98 1555 1555 1.34 LINK C SER B 116 N MSE B 117 1555 1555 1.37 LINK C SER B 132 N MSE B 133 1555 1555 1.32 LINK C GLY B 151 N MSE B 152 1555 1555 1.35 LINK C LEU B 260 N MSE B 261 1555 1555 1.35 LINK C ASN B 297 N MSE B 298 1555 1555 1.34 SITE 1 AC1 8 LEU A 158 ALA A 161 ASN A 162 SER A 165 SITE 2 AC1 8 ALA A 166 GLY A 220 MRD A 831 MRD A 886 SITE 1 AC2 4 SER A 132 HOH A 445 HOH A 513 MPD A 707 SITE 1 AC3 8 ALA A 61 HIS A 131 ILE A 189 LEU A 251 SITE 2 AC3 8 HIS A 279 VAL A 280 HOH A 445 HOH A 529 SITE 1 AC4 4 SER A 165 LYS A 170 LEU A 186 MPD A 707 SITE 1 AC5 7 ALA B 161 ASN B 162 SER B 165 LEU B 215 SITE 2 AC5 7 LEU B 223 HOH B 456 MRD B 830 SITE 1 AC6 4 SER B 132 HOH B 444 HOH B 516 MPD B 812 SITE 1 AC7 12 GLY B 60 ALA B 61 GLU B 63 HIS B 131 SITE 2 AC7 12 LEU B 194 TYR B 204 LEU B 251 HIS B 279 SITE 3 AC7 12 VAL B 280 HOH B 444 HOH B 447 HOH B 516 CRYST1 86.588 126.311 140.567 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011549 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007917 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007114 0.00000