PDB Short entry for 3KJO HEADER DNA BINDING PROTEIN/DNA 03-NOV-09 3KJO TITLE CRYSTAL STRUCTURE OF HPOT1V2-DTRUD(AGGGTTAG) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTECTION OF TELOMERES PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-299; COMPND 5 SYNONYM: HPOT1, POT1-LIKE TELOMERE END-BINDING PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: PUTATIVE SPLICE VARIANT OF HPOT1; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA/RNA (5'-D(*T)-R(P*U)-D(P*AP*GP*GP*GP*TP*TP*AP*G)-3'); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: SINGLE-STRANDED DNA CONTAINING AN RU RIBONUCLEOTIDE COMPND 13 SUBSTITUTION AT POSITION 4. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POT1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PFASTBAC; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 OTHER_DETAILS: 10MER SYNTHETIC OLIGONUCLEOTIDE CONTAINING HUMAN SOURCE 15 TELOMERIC REPEAT SEQUENCE WITH A SINGLE RIBONUCLEOTIDE AT POSITION 4 KEYWDS OB DOMAIN, PROTEIN-DNA COMPLEX, PROTEIN-RNA COMPLEX, ALTERNATIVE KEYWDS 2 SPLICING, CHROMOSOMAL PROTEIN, DNA-BINDING, NUCLEUS, POLYMORPHISM, KEYWDS 3 TELOMERE, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.NANDAKUMAR,T.R.CECH,E.R.PODELL REVDAT 4 06-SEP-23 3KJO 1 REMARK REVDAT 3 01-NOV-17 3KJO 1 REMARK REVDAT 2 02-FEB-10 3KJO 1 JRNL REVDAT 1 19-JAN-10 3KJO 0 JRNL AUTH J.NANDAKUMAR,E.R.PODELL,T.R.CECH JRNL TITL HOW TELOMERIC PROTEIN POT1 AVOIDS RNA TO ACHIEVE SPECIFICITY JRNL TITL 2 FOR SINGLE-STRANDED DNA. JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 651 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 20080730 JRNL DOI 10.1073/PNAS.0911099107 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 208708.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 34134 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM SET THAT WAS USED FOR REMARK 3 STRUCTURAL SOLUTION OF 1XJV REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1716 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4843 REMARK 3 BIN R VALUE (WORKING SET) : 0.3200 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 269 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.019 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2309 REMARK 3 NUCLEIC ACID ATOMS : 207 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 223 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.37000 REMARK 3 B22 (A**2) : 1.18000 REMARK 3 B33 (A**2) : -6.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.21 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.840 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.390 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.190 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.000 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.020 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 53.75 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3KJO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-NOV-09. REMARK 100 THE DEPOSITION ID IS D_1000056075. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : KOHZU REMARK 200 OPTICS : KOHZU: DOUBLE CRYSTAL SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35300 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.33200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 1XJV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, TRISODIUM CITRATE , REMARK 280 PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.86800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.86800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 50.93350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.79550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 50.93350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.79550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.86800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 50.93350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.79550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 35.86800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 50.93350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.79550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 320 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 398 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 VAL A 4 REMARK 465 PRO A 5 REMARK 465 TRP A 148 REMARK 465 ASP A 200 REMARK 465 LEU A 201 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 151 O HOH B 151 3655 1.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 U B 4 N1 - C1' - C2' ANGL. DEV. = 8.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 91 -11.82 66.71 REMARK 500 PRO A 146 178.19 -50.28 REMARK 500 VAL A 174 -75.13 -125.54 REMARK 500 ASP A 175 29.03 -147.39 REMARK 500 GLN A 214 -128.94 50.50 REMARK 500 ASP A 224 -117.97 48.54 REMARK 500 TYR A 271 19.09 56.92 REMARK 500 THR A 298 76.92 -118.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1XJV RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH ALL-DNA 10MER OLIGONUCLEOTIDE REMARK 900 RELATED ID: 3KJP RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH ALL-DNA 12MER OLIGOMUCLEOTIDE DBREF 3KJO A 1 299 UNP Q9NUX5 POTE1_HUMAN 1 299 DBREF 3KJO B 3 12 PDB 3KJO 3KJO 3 12 SEQRES 1 A 299 MET SER LEU VAL PRO ALA THR ASN TYR ILE TYR THR PRO SEQRES 2 A 299 LEU ASN GLN LEU LYS GLY GLY THR ILE VAL ASN VAL TYR SEQRES 3 A 299 GLY VAL VAL LYS PHE PHE LYS PRO PRO TYR LEU SER LYS SEQRES 4 A 299 GLY THR ASP TYR CYS SER VAL VAL THR ILE VAL ASP GLN SEQRES 5 A 299 THR ASN VAL LYS LEU THR CYS LEU LEU PHE SER GLY ASN SEQRES 6 A 299 TYR GLU ALA LEU PRO ILE ILE TYR LYS ASN GLY ASP ILE SEQRES 7 A 299 VAL ARG PHE HIS ARG LEU LYS ILE GLN VAL TYR LYS LYS SEQRES 8 A 299 GLU THR GLN GLY ILE THR SER SER GLY PHE ALA SER LEU SEQRES 9 A 299 THR PHE GLU GLY THR LEU GLY ALA PRO ILE ILE PRO ARG SEQRES 10 A 299 THR SER SER LYS TYR PHE ASN PHE THR THR GLU ASP HIS SEQRES 11 A 299 LYS MET VAL GLU ALA LEU ARG VAL TRP ALA SER THR HIS SEQRES 12 A 299 MET SER PRO SER TRP THR LEU LEU LYS LEU CYS ASP VAL SEQRES 13 A 299 GLN PRO MET GLN TYR PHE ASP LEU THR CYS GLN LEU LEU SEQRES 14 A 299 GLY LYS ALA GLU VAL ASP GLY ALA SER PHE LEU LEU LYS SEQRES 15 A 299 VAL TRP ASP GLY THR ARG THR PRO PHE PRO SER TRP ARG SEQRES 16 A 299 VAL LEU ILE GLN ASP LEU VAL LEU GLU GLY ASP LEU SER SEQRES 17 A 299 HIS ILE HIS ARG LEU GLN ASN LEU THR ILE ASP ILE LEU SEQRES 18 A 299 VAL TYR ASP ASN HIS VAL HIS VAL ALA ARG SER LEU LYS SEQRES 19 A 299 VAL GLY SER PHE LEU ARG ILE TYR SER LEU HIS THR LYS SEQRES 20 A 299 LEU GLN SER MET ASN SER GLU ASN GLN THR MET LEU SER SEQRES 21 A 299 LEU GLU PHE HIS LEU HIS GLY GLY THR SER TYR GLY ARG SEQRES 22 A 299 GLY ILE ARG VAL LEU PRO GLU SER ASN SER ASP VAL ASP SEQRES 23 A 299 GLN LEU LYS LYS ASP LEU GLU SER ALA ASN LEU THR ALA SEQRES 1 B 10 DT U DA DG DG DG DT DT DA DG FORMUL 3 HOH *223(H2 O) HELIX 1 1 ASN A 65 LEU A 69 5 5 HELIX 2 2 THR A 126 MET A 144 1 19 HELIX 3 3 LYS A 152 VAL A 156 5 5 HELIX 4 4 ASP A 206 GLN A 214 1 9 HELIX 5 5 ASN A 215 THR A 217 5 3 HELIX 6 6 ASN A 225 LEU A 233 1 9 HELIX 7 7 THR A 269 ARG A 273 5 5 HELIX 8 8 ASN A 282 THR A 298 1 17 SHEET 1 A 6 THR A 21 LEU A 37 0 SHEET 2 A 6 TYR A 43 VAL A 50 -1 O CYS A 44 N TYR A 36 SHEET 3 A 6 LYS A 56 SER A 63 -1 O SER A 63 N TYR A 43 SHEET 4 A 6 GLU A 92 PHE A 106 1 O GLY A 95 N LEU A 60 SHEET 5 A 6 ILE A 78 TYR A 89 -1 N TYR A 89 O GLU A 92 SHEET 6 A 6 THR A 21 LEU A 37 -1 N THR A 21 O ILE A 86 SHEET 1 B 7 GLU A 204 GLY A 205 0 SHEET 2 B 7 TYR A 161 GLU A 173 -1 N LYS A 171 O GLU A 204 SHEET 3 B 7 SER A 178 TRP A 184 -1 O LEU A 180 N ALA A 172 SHEET 4 B 7 ILE A 218 TYR A 223 -1 O ILE A 220 N LEU A 181 SHEET 5 B 7 THR A 257 LEU A 265 1 O LEU A 265 N LEU A 221 SHEET 6 B 7 PHE A 238 MET A 251 -1 N GLN A 249 O SER A 260 SHEET 7 B 7 GLY A 274 LEU A 278 -1 O LEU A 278 N PHE A 238 SHEET 1 C 4 GLU A 204 GLY A 205 0 SHEET 2 C 4 TYR A 161 GLU A 173 -1 N LYS A 171 O GLU A 204 SHEET 3 C 4 PHE A 238 MET A 251 -1 O LEU A 244 N PHE A 162 SHEET 4 C 4 GLY A 274 LEU A 278 -1 O LEU A 278 N PHE A 238 CRYST1 101.867 103.591 71.736 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009817 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009653 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013940 0.00000