PDB Short entry for 3KMM
HEADER    TRANSFERASE/TRANSFERASE INHIBITOR       10-NOV-09   3KMM              
TITLE     STRUCTURE OF HUMAN LCK KINASE WITH A SMALL MOLECULE INHIBITOR         
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE LCK;                
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: PROTEIN TYROSINE KINASE DOMAIN (RESIDUES 229-509);         
COMPND   5 SYNONYM: LYMPHOCYTE CELL-SPECIFIC PROTEIN-TYROSINE KINASE, P56-LCK,  
COMPND   6 LSK, T CELL-SPECIFIC PROTEIN-TYROSINE KINASE;                        
COMPND   7 EC: 2.7.10.2;                                                        
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: LCK;                                                           
SOURCE   6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;                            
SOURCE   7 EXPRESSION_SYSTEM_COMMON: INCECT CELLS;                              
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 7108;                                       
SOURCE   9 EXPRESSION_SYSTEM_STRAIN: SF9;                                       
SOURCE  10 EXPRESSION_SYSTEM_CELL_LINE: SF9;                                    
SOURCE  11 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM;                      
SOURCE  12 EXPRESSION_SYSTEM_VECTOR: BACULOVIRUS;                               
SOURCE  13 EXPRESSION_SYSTEM_PLASMID: PACUW51;                                  
SOURCE  14 EXPRESSION_SYSTEM_GENE: POLYHEDRIN                                   
KEYWDS    TYROSINE KINASE, ATP-BINDING, KINASE, NUCLEOTIDE-BINDING,             
KEYWDS   2 PHOSPHOPROTEIN, TRANSFERASE, TYROSINE-PROTEIN KINASE, TRANSFERASE-   
KEYWDS   3 TRANSFERASE INHIBITOR COMPLEX                                        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    B.J.GRAVES,A.SURGENOR,W.HARRIS,I.SMITH,S.ORCHARD,H.FLOTOW,E.MURRAY    
REVDAT   5   22-NOV-23 3KMM    1       REMARK                                   
REVDAT   4   06-SEP-23 3KMM    1       REMARK                                   
REVDAT   3   13-OCT-21 3KMM    1       REMARK SEQADV LINK                       
REVDAT   2   07-MAR-18 3KMM    1       REMARK                                   
REVDAT   1   08-DEC-10 3KMM    0                                                
JRNL        AUTH   B.J.GRAVES,A.SURGENOR,W.HARRIS,I.SMITH,S.ORCHARD,H.FLOTOW,   
JRNL        AUTH 2 E.MURRAY                                                     
JRNL        TITL   STRUCTURE OF HUMAN LCK KINASE WITH A SMALL MOLECULE          
JRNL        TITL 2 INHIBITOR                                                    
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   H.YAMAGUCHI,W.A.HENDRICKSON                                  
REMARK   1  TITL   STRUCTURAL BASIS FOR ACTIVATION OF HUMAN LYMPHOCYTE KINASE   
REMARK   1  TITL 2 LCK UPON TYROSINE PHOSPHORYLATION                            
REMARK   1  REF    NATURE                        V. 384   484 1996              
REMARK   1  REFN                   ISSN 0028-0836                               
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNX 2005                                             
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN,ACCELRYS                   
REMARK   3               : SOFTWARE INC.(BADGER,BERARD,KUMAR,SZALMA,            
REMARK   3               : YIP,DZAKULA)                                         
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 28.56                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : 1302833.100                    
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : 0.0000                         
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 94.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 7251                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.167                           
REMARK   3   R VALUE            (WORKING SET) : 0.165                           
REMARK   3   FREE R VALUE                     : 0.223                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.600                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 337                             
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : 0.012                           
REMARK   3                                                                      
REMARK   3  FIT/AGREEMENT OF MODEL WITH ALL DATA.                               
REMARK   3   R VALUE     (WORKING + TEST SET, NO CUTOFF) : 0.1780               
REMARK   3   R VALUE            (WORKING SET, NO CUTOFF) : 0.1760               
REMARK   3   FREE R VALUE                    (NO CUTOFF) : 0.225                
REMARK   3   FREE R VALUE TEST SET SIZE   (%, NO CUTOFF) : 4.600                
REMARK   3   FREE R VALUE TEST SET COUNT     (NO CUTOFF) : 337                  
REMARK   3   ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : 0.0120               
REMARK   3   TOTAL NUMBER OF REFLECTIONS     (NO CUTOFF) : 7251                 
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 6                            
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.80                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.98                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 95.90                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 1144                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2060                       
REMARK   3   BIN FREE R VALUE                    : 0.3330                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : 4.40                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 53                           
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.046                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2209                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 40                                      
REMARK   3   SOLVENT ATOMS            : 115                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 16.00                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 19.20                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -6.95000                                             
REMARK   3    B22 (A**2) : -0.28000                                             
REMARK   3    B33 (A**2) : 7.23000                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.24                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.21                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.35                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.44                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.005                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.000                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 20.40                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 0.660                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : RESTRAINED                                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 1.360 ; 1.500                
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 2.360 ; 2.000                
REMARK   3   SIDE-CHAIN BOND              (A**2) : 2.030 ; 2.000                
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 3.160 ; 2.500                
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : FLAT MODEL                                           
REMARK   3   KSOL        : 0.33                                                 
REMARK   3   BSOL        : 30.66                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NONE                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PROTEIN_REP.P                                  
REMARK   3  PARAMETER FILE  2  : WATER_REP.PAR                                  
REMARK   3  PARAMETER FILE  3  : ION.PARAM                                      
REMARK   3  PARAMETER FILE  4  : RO32-8464.PRX                                  
REMARK   3  PARAMETER FILE  5  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : PROTEIN.TOP                                    
REMARK   3  TOPOLOGY FILE  2   : WATER.TOP                                      
REMARK   3  TOPOLOGY FILE  3   : ION.TOP                                        
REMARK   3  TOPOLOGY FILE  4   : RO32-8464.TPX                                  
REMARK   3  TOPOLOGY FILE  5   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS:                                           
REMARK   3  RESOLUTION-DEPENDENT WEIGHTING SCHEME OTHER REFINEMENT REMARKS:     
REMARK   3  BULK SOLVENT MODEL USED                                             
REMARK   3                                                                      
REMARK   3  RESIDUES AT THE N-TERMINUS                                          
REMARK   3  (MET 222 THROUGH GLN 230), C-TERMINUS (GLU 502 THROUGH              
REMARK   3  PRO 509) AND TWO IN THE ACTIVATION LOOP (GLY 399 AND                
REMARK   3  ALA 400) HAVE WEAK OR NON-EXISTENT ELECTRON DENSITY.  THE           
REMARK   3  RESIDUES AT THE TERMINI ARE NOT INCLUDED IN REFINEMENT.             
REMARK   3                                                                      
REMARK   3  THE FOLLOWING RESIDUES HAVE                                         
REMARK   3  SIDE CHAIN ATOMS WHICH ARE POORLY DEFINED BY ELECTRON               
REMARK   3  DENSITY BUT THEY HAVE BEEN INCLUDED IN REFINEMENT: GLU 237          
REMARK   3  (ENTIRE SIDE CHAIN), LYS 246 (BEYOND CG), LYS 276 (BEYOND           
REMARK   3  CD), GLN 309 (BEYOND CB), GLU 390 (ENTIRE SIDE CHAIN),              
REMARK   3  ASN 392 (BEYOND CB), ARG 397 (ENTIRE SIDE CHAIN),                   
REMARK   3  GLU 398 (BEYOND CB), LYS 401 (BEYOND CB), ARG 438 (BEYOND           
REMARK   3  CD) AND ASN 464 (ENTIRE SIDE CHAIN).                                
REMARK   4                                                                      
REMARK   4 3KMM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-NOV-09.                  
REMARK 100 THE DEPOSITION ID IS D_1000056180.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 01-MAY-98                          
REMARK 200  TEMPERATURE           (KELVIN) : 277                                
REMARK 200  PH                             : 6.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : CU FINE FOCUS                      
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : YALE MIRRORS                       
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : RIGAKU RAXIS IV++                  
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 7251                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.800                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 94.2                               
REMARK 200  DATA REDUNDANCY                : 3.000                              
REMARK 200  R MERGE                    (I) : 0.11100                            
REMARK 200  R SYM                      (I) : 0.11100                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 10.4000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.90                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 95.7                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.26100                            
REMARK 200  R SYM FOR SHELL            (I) : 0.26100                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.700                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: PDB ENTRY 3LCK                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 47.26                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8-2.5M AMMONIUM SULFATE, 0.1M          
REMARK 280  BISTRIS, PH6.5,VAPOR DIFFUSION, SITTING DROP, 277 DEG K, PROTEIN    
REMARK 280  STOCK AT 1.5 MG/ML                                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       21.28950            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       46.42500            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       37.08000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       46.42500            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       21.28950            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       37.08000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A   222                                                      
REMARK 465     HIS A   223                                                      
REMARK 465     HIS A   224                                                      
REMARK 465     HIS A   225                                                      
REMARK 465     HIS A   226                                                      
REMARK 465     HIS A   227                                                      
REMARK 465     HIS A   228                                                      
REMARK 465     PRO A   229                                                      
REMARK 465     GLN A   230                                                      
REMARK 465     GLU A   502                                                      
REMARK 465     GLY A   503                                                      
REMARK 465     GLN A   504                                                      
REMARK 465     PHE A   505                                                      
REMARK 465     GLN A   506                                                      
REMARK 465     PRO A   507                                                      
REMARK 465     GLN A   508                                                      
REMARK 465     PRO A   509                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    MET A 280     -178.13   -175.80                                   
REMARK 500    HIS A 297      148.90   -172.47                                   
REMARK 500    THR A 308       36.88    -95.16                                   
REMARK 500    ARG A 363       -3.08     82.64                                   
REMARK 500    ASP A 364       40.49   -141.95                                   
REMARK 500    ASP A 382       89.79     60.86                                   
REMARK 500    ASN A 392      -80.45     54.76                                   
REMARK 500    GLU A 398       90.20    -69.28                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LHL A 1                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 901                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3LCK   RELATED DB: PDB                                   
DBREF  3KMM A  229   509  UNP    P06239   LCK_HUMAN      229    509             
SEQADV 3KMM MET A  222  UNP  P06239              EXPRESSION TAG                 
SEQADV 3KMM HIS A  223  UNP  P06239              EXPRESSION TAG                 
SEQADV 3KMM HIS A  224  UNP  P06239              EXPRESSION TAG                 
SEQADV 3KMM HIS A  225  UNP  P06239              EXPRESSION TAG                 
SEQADV 3KMM HIS A  226  UNP  P06239              EXPRESSION TAG                 
SEQADV 3KMM HIS A  227  UNP  P06239              EXPRESSION TAG                 
SEQADV 3KMM HIS A  228  UNP  P06239              EXPRESSION TAG                 
SEQADV 3KMM PHE A  505  UNP  P06239    TYR   505 ENGINEERED MUTATION            
SEQRES   1 A  288  MET HIS HIS HIS HIS HIS HIS PRO GLN LYS PRO TRP TRP          
SEQRES   2 A  288  GLU ASP GLU TRP GLU VAL PRO ARG GLU THR LEU LYS LEU          
SEQRES   3 A  288  VAL GLU ARG LEU GLY ALA GLY GLN PHE GLY GLU VAL TRP          
SEQRES   4 A  288  MET GLY TYR TYR ASN GLY HIS THR LYS VAL ALA VAL LYS          
SEQRES   5 A  288  SER LEU LYS GLN GLY SER MET SER PRO ASP ALA PHE LEU          
SEQRES   6 A  288  ALA GLU ALA ASN LEU MET LYS GLN LEU GLN HIS GLN ARG          
SEQRES   7 A  288  LEU VAL ARG LEU TYR ALA VAL VAL THR GLN GLU PRO ILE          
SEQRES   8 A  288  TYR ILE ILE THR GLU TYR MET GLU ASN GLY SER LEU VAL          
SEQRES   9 A  288  ASP PHE LEU LYS THR PRO SER GLY ILE LYS LEU THR ILE          
SEQRES  10 A  288  ASN LYS LEU LEU ASP MET ALA ALA GLN ILE ALA GLU GLY          
SEQRES  11 A  288  MET ALA PHE ILE GLU GLU ARG ASN TYR ILE HIS ARG ASP          
SEQRES  12 A  288  LEU ARG ALA ALA ASN ILE LEU VAL SER ASP THR LEU SER          
SEQRES  13 A  288  CYS LYS ILE ALA ASP PHE GLY LEU ALA ARG LEU ILE GLU          
SEQRES  14 A  288  ASP ASN GLU PTR THR ALA ARG GLU GLY ALA LYS PHE PRO          
SEQRES  15 A  288  ILE LYS TRP THR ALA PRO GLU ALA ILE ASN TYR GLY THR          
SEQRES  16 A  288  PHE THR ILE LYS SER ASP VAL TRP SER PHE GLY ILE LEU          
SEQRES  17 A  288  LEU THR GLU ILE VAL THR HIS GLY ARG ILE PRO TYR PRO          
SEQRES  18 A  288  GLY MET THR ASN PRO GLU VAL ILE GLN ASN LEU GLU ARG          
SEQRES  19 A  288  GLY TYR ARG MET VAL ARG PRO ASP ASN CYS PRO GLU GLU          
SEQRES  20 A  288  LEU TYR GLN LEU MET ARG LEU CYS TRP LYS GLU ARG PRO          
SEQRES  21 A  288  GLU ASP ARG PRO THR PHE ASP TYR LEU ARG SER VAL LEU          
SEQRES  22 A  288  GLU ASP PHE PHE THR ALA THR GLU GLY GLN PHE GLN PRO          
SEQRES  23 A  288  GLN PRO                                                      
MODRES 3KMM PTR A  394  TYR  O-PHOSPHOTYROSINE                                  
HET    PTR  A 394      16                                                       
HET    LHL  A   1      35                                                       
HET    SO4  A 901       5                                                       
HETNAM     PTR O-PHOSPHOTYROSINE                                                
HETNAM     LHL 3-(2,6-DICHLOROPHENYL)-7-({4-[2-(DIETHYLAMINO)                   
HETNAM   2 LHL  ETHOXY]PHENYL}AMINO)-1-METHYL-3,4-DIHYDROPYRIMIDO[4,5-          
HETNAM   3 LHL  D]PYRIMIDIN-2(1H)-ONE                                           
HETNAM     SO4 SULFATE ION                                                      
HETSYN     PTR PHOSPHONOTYROSINE                                                
FORMUL   1  PTR    C9 H12 N O6 P                                                
FORMUL   2  LHL    C25 H28 CL2 N6 O2                                            
FORMUL   3  SO4    O4 S 2-                                                      
FORMUL   4  HOH   *115(H2 O)                                                    
HELIX    1   1 PRO A  232  ASP A  236  5                                   5    
HELIX    2   2 PRO A  241  GLU A  243  5                                   3    
HELIX    3   3 SER A  281  LEU A  295  1                                  15    
HELIX    4   4 LEU A  324  LEU A  328  1                                   5    
HELIX    5   5 THR A  330  LYS A  335  1                                   6    
HELIX    6   6 THR A  337  ARG A  358  1                                  22    
HELIX    7   7 ARG A  366  ALA A  368  5                                   3    
HELIX    8   8 ALA A  408  TYR A  414  1                                   7    
HELIX    9   9 THR A  418  THR A  435  1                                  18    
HELIX   10  10 THR A  445  ARG A  455  1                                  11    
HELIX   11  11 PRO A  466  TRP A  477  1                                  12    
HELIX   12  12 ARG A  480  ARG A  484  5                                   5    
HELIX   13  13 THR A  486  THR A  501  1                                  16    
SHEET    1   A 5 LEU A 245  GLY A 254  0                                        
SHEET    2   A 5 GLY A 257  TYR A 264 -1  O  VAL A 259   N  LEU A 251           
SHEET    3   A 5 THR A 268  LEU A 275 -1  O  VAL A 272   N  TRP A 260           
SHEET    4   A 5 TYR A 313  GLU A 317 -1  O  THR A 316   N  ALA A 271           
SHEET    5   A 5 LEU A 303  VAL A 307 -1  N  TYR A 304   O  ILE A 315           
SHEET    1   B 3 GLY A 322  SER A 323  0                                        
SHEET    2   B 3 ILE A 370  VAL A 372 -1  O  VAL A 372   N  GLY A 322           
SHEET    3   B 3 CYS A 378  ILE A 380 -1  O  LYS A 379   N  LEU A 371           
SHEET    1   C 2 TYR A 360  ILE A 361  0                                        
SHEET    2   C 2 ARG A 387  LEU A 388 -1  O  ARG A 387   N  ILE A 361           
SHEET    1   D 2 PTR A 394  THR A 395  0                                        
SHEET    2   D 2 THR A 416  PHE A 417 -1  O  PHE A 417   N  PTR A 394           
LINK         C   GLU A 393                 N   PTR A 394     1555   1555  1.33  
LINK         C   PTR A 394                 N   THR A 395     1555   1555  1.33  
CISPEP   1 GLU A  310    PRO A  311          0         0.56                     
SITE     1 AC1 12 HOH A  43  VAL A 259  ALA A 271  LYS A 273                    
SITE     2 AC1 12 GLU A 288  THR A 316  GLU A 317  TYR A 318                    
SITE     3 AC1 12 MET A 319  GLY A 322  LEU A 371  ASP A 382                    
SITE     1 AC2  8 HOH A  17  HOH A  68  GLN A 298  ARG A 299                    
SITE     2 AC2  8 SER A 377  LYS A 379  ARG A 458  ARG A 474                    
CRYST1   42.579   74.160   92.850  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.023486  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.013484  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.010770        0.00000