PDB Short entry for 3L19 HEADER TRANSFERASE 11-DEC-09 3L19 TITLE CRYSTAL STRUCTURE OF CALCIUM BINDING DOMAIN OF CPCDPK3, CGD5_820 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALCIUM/CALMODULIN DEPENDENT PROTEIN KINASE WITH A KINASE COMPND 3 DOMAIN AND 4 CALMODULIN LIKE EF HANDS; COMPND 4 CHAIN: A, B; COMPND 5 EC: 2.7.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORIDIUM PARVUM; SOURCE 3 ORGANISM_TAXID: 353152; SOURCE 4 STRAIN: IOWA II; SOURCE 5 GENE: CGD5_820; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15-MHL KEYWDS TRANSFERASE, CALCIUM DEPENDENT PROTEIN KINASE, EF HAND, CALMODULIN, KEYWDS 2 ATP-BINDING, KINASE, NUCLEOTIDE-BINDING, SERINE/THREONINE-PROTEIN KEYWDS 3 KINASE, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR W.QIU,A.HUTCHINSON,A.WERNIMONT,J.R.WALKER,H.SULLIVAN,Y.-H.LIN, AUTHOR 2 F.MACKENZIE,I.KOZIERADZKI,D.COSSAR,M.SCHAPIRA,G.SENISTERRA,M.VEDADI, AUTHOR 3 C.H.ARROWSMITH,C.BOUNTRA,J.WEIGELT,A.M.EDWARDS,A.BOCHKAREV,R.HUI, AUTHOR 4 M.AMANI,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 06-SEP-23 3L19 1 REMARK SEQADV LINK REVDAT 2 13-JUL-11 3L19 1 VERSN REVDAT 1 22-DEC-09 3L19 0 JRNL AUTH W.QIU,A.HUTCHINSON,A.WERNIMONT,J.R.WALKER,H.SULLIVAN, JRNL AUTH 2 Y.-H.LIN,F.MACKENZIE,I.KOZIERADZKI,D.COSSAR,M.SCHAPIRA, JRNL AUTH 3 G.SENISTERRA,M.VEDADI,C.H.ARROWSMITH,C.BOUNTRA,J.WEIGELT, JRNL AUTH 4 A.M.EDWARDS,A.BOCHKAREV,R.HUI,M.AMANI JRNL TITL CRYSTAL STRUCTURE OF CALCIUM BINDING DOMAIN OF CPCDPK3, JRNL TITL 2 CGD5_820 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 22750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1168 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 11 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2602 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE : 0.2632 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.59 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 154 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2867 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 135 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.02120 REMARK 3 B22 (A**2) : -11.77680 REMARK 3 B33 (A**2) : 5.75560 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.67660 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.309 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : NULL ; NULL ; NULL REMARK 3 BOND ANGLES : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : NULL ; NULL ; NULL REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3L19 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1000056705. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97948 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMETER. ADJUSTABLE REMARK 200 FOCUSING MIRRORS IN K-B GEOMET RY REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22779 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 7.390 REMARK 200 R MERGE (I) : 0.06920 REMARK 200 R SYM (I) : 0.03510 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.58 REMARK 200 R MERGE FOR SHELL (I) : 0.59510 REMARK 200 R SYM FOR SHELL (I) : 0.50650 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.990 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: PDB ENTRY 2AAO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG550MME, 0.05M MAGNESIUM REMARK 280 CHLORIDE, 0.1M HEPES, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 46.28500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.09350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 46.28500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.09350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 92.57000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -9.95658 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 72.12299 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 HIS A 311 REMARK 465 HIS A 312 REMARK 465 HIS A 313 REMARK 465 SER A 314 REMARK 465 SER A 315 REMARK 465 GLY A 316 REMARK 465 ARG A 317 REMARK 465 GLU A 318 REMARK 465 ASN A 319 REMARK 465 LEU A 320 REMARK 465 TYR A 321 REMARK 465 PHE A 322 REMARK 465 GLN A 323 REMARK 465 GLY A 324 REMARK 465 LYS A 325 REMARK 465 GLU A 326 REMARK 465 SER A 327 REMARK 465 GLY A 328 REMARK 465 ILE A 329 REMARK 465 GLY A 400 REMARK 465 ASP A 478 REMARK 465 HIS A 479 REMARK 465 GLU A 517 REMARK 465 PRO A 518 REMARK 465 GLN A 519 REMARK 465 LEU A 520 REMARK 465 MET B 307 REMARK 465 HIS B 308 REMARK 465 HIS B 309 REMARK 465 HIS B 310 REMARK 465 HIS B 311 REMARK 465 HIS B 312 REMARK 465 HIS B 313 REMARK 465 SER B 314 REMARK 465 SER B 315 REMARK 465 GLY B 316 REMARK 465 ARG B 317 REMARK 465 GLU B 318 REMARK 465 ASN B 319 REMARK 465 LEU B 320 REMARK 465 TYR B 321 REMARK 465 PHE B 322 REMARK 465 GLN B 323 REMARK 465 GLY B 324 REMARK 465 LYS B 325 REMARK 465 GLU B 326 REMARK 465 SER B 327 REMARK 465 GLY B 328 REMARK 465 ILE B 329 REMARK 465 GLY B 400 REMARK 465 GLU B 401 REMARK 465 LEU B 477 REMARK 465 ASP B 478 REMARK 465 HIS B 479 REMARK 465 LEU B 480 REMARK 465 SER B 490 REMARK 465 GLY B 491 REMARK 465 GLU B 517 REMARK 465 PRO B 518 REMARK 465 GLN B 519 REMARK 465 LEU B 520 REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE B 1 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 1 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 423 OD1 REMARK 620 2 ASP A 425 OD1 84.5 REMARK 620 3 ASN A 427 OD1 88.7 78.6 REMARK 620 4 TYR A 429 O 83.4 156.8 81.5 REMARK 620 5 GLU A 434 OE2 94.0 77.0 155.1 123.5 REMARK 620 6 GLU A 434 OE1 113.7 125.0 147.2 78.1 51.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 2 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 146 O REMARK 620 2 ASP A 459 OD1 171.7 REMARK 620 3 ASP A 461 OD2 91.2 84.6 REMARK 620 4 ASN A 463 OD1 94.3 77.7 73.6 REMARK 620 5 LYS A 465 O 99.3 81.0 149.0 76.6 REMARK 620 6 GLU A 470 OE2 72.6 115.5 130.4 151.5 80.6 REMARK 620 7 GLU A 470 OE1 81.1 104.5 74.1 147.3 136.1 57.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 3 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 98 O REMARK 620 2 ASP A 493 OD2 154.6 REMARK 620 3 ASN A 495 OD1 79.1 80.0 REMARK 620 4 ASP A 497 OD1 78.1 84.2 80.3 REMARK 620 5 ASP A 499 O 108.5 84.7 153.8 77.0 REMARK 620 6 GLU A 504 OE1 80.2 123.3 120.6 146.1 85.7 REMARK 620 7 GLU A 504 OE2 80.0 106.0 69.9 145.8 135.4 51.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 8 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 87 O REMARK 620 2 ASP A 379 OD1 165.4 REMARK 620 3 ASN A 381 OD1 89.9 88.2 REMARK 620 4 ASP A 383 OD2 75.7 89.7 76.1 REMARK 620 5 GLN A 385 O 95.7 80.4 155.4 82.1 REMARK 620 6 GLU A 390 OE2 85.6 107.7 121.8 154.5 82.7 REMARK 620 7 GLU A 390 OE1 100.2 93.1 73.2 149.0 128.8 50.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 4 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 423 OD1 REMARK 620 2 ASP B 425 OD1 82.7 REMARK 620 3 ASN B 427 OD1 88.7 79.6 REMARK 620 4 TYR B 429 O 82.8 157.3 82.7 REMARK 620 5 GLU B 434 OE2 91.4 75.1 154.5 122.6 REMARK 620 6 GLU B 434 OE1 111.7 124.0 149.4 77.7 51.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 5 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 59 O REMARK 620 2 ASP B 379 OD1 161.5 REMARK 620 3 ASN B 381 OD1 91.5 78.4 REMARK 620 4 ASP B 383 OD2 80.1 82.2 73.6 REMARK 620 5 GLN B 385 O 99.5 83.0 150.6 81.5 REMARK 620 6 GLU B 390 OE2 86.4 112.0 122.3 159.7 85.8 REMARK 620 7 GLU B 390 OE1 100.1 91.5 71.9 145.5 131.6 52.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 6 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 64 O REMARK 620 2 ASP B 459 OD1 161.9 REMARK 620 3 ASP B 461 OD2 104.4 83.0 REMARK 620 4 ASN B 463 OD1 90.4 75.6 74.3 REMARK 620 5 LYS B 465 O 88.1 77.9 148.9 77.3 REMARK 620 6 GLU B 470 OE2 76.5 111.3 131.1 153.3 79.1 REMARK 620 7 GLU B 470 OE1 95.7 102.2 74.7 149.0 133.1 56.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 7 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 58 O REMARK 620 2 ASP B 493 OD1 167.3 REMARK 620 3 ASN B 495 OD1 75.8 93.4 REMARK 620 4 ASP B 497 OD1 79.9 92.7 84.7 REMARK 620 5 ASP B 499 O 101.5 86.3 159.6 75.0 REMARK 620 6 GLU B 504 OE2 89.7 94.6 78.3 161.8 122.1 REMARK 620 7 GLU B 504 OE1 79.4 112.6 123.4 138.9 75.0 51.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 521 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 521 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 522 DBREF 3L19 A 325 520 UNP Q5CS01 Q5CS01_CRYPV 325 520 DBREF 3L19 B 325 520 UNP Q5CS01 Q5CS01_CRYPV 325 520 SEQADV 3L19 MET A 307 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS A 308 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS A 309 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS A 310 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS A 311 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS A 312 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS A 313 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 SER A 314 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 SER A 315 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 GLY A 316 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 ARG A 317 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 GLU A 318 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 ASN A 319 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 LEU A 320 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 TYR A 321 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 PHE A 322 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 GLN A 323 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 GLY A 324 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 MET B 307 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS B 308 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS B 309 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS B 310 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS B 311 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS B 312 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 HIS B 313 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 SER B 314 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 SER B 315 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 GLY B 316 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 ARG B 317 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 GLU B 318 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 ASN B 319 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 LEU B 320 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 TYR B 321 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 PHE B 322 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 GLN B 323 UNP Q5CS01 EXPRESSION TAG SEQADV 3L19 GLY B 324 UNP Q5CS01 EXPRESSION TAG SEQRES 1 A 214 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 214 LEU TYR PHE GLN GLY LYS GLU SER GLY ILE GLU LEU PRO SEQRES 3 A 214 SER LEU ALA ASN ALA ILE GLU ASN MET ARG LYS PHE GLN SEQRES 4 A 214 ASN SER GLN LYS LEU ALA GLN ALA ALA LEU LEU TYR MET SEQRES 5 A 214 ALA SER LYS LEU THR SER GLN GLU GLU THR LYS GLU LEU SEQRES 6 A 214 THR ASP ILE PHE ARG HIS ILE ASP LYS ASN GLY ASP GLY SEQRES 7 A 214 GLN LEU ASP ARG GLN GLU LEU ILE ASP GLY TYR SER LYS SEQRES 8 A 214 LEU SER GLY GLU GLU VAL ALA VAL PHE ASP LEU PRO GLN SEQRES 9 A 214 ILE GLU SER GLU VAL ASP ALA ILE LEU GLY ALA ALA ASP SEQRES 10 A 214 PHE ASP ARG ASN GLY TYR ILE ASP TYR SER GLU PHE VAL SEQRES 11 A 214 THR VAL ALA MET ASP ARG LYS SER LEU LEU SER LYS ASP SEQRES 12 A 214 LYS LEU GLU SER ALA PHE GLN LYS PHE ASP GLN ASP GLY SEQRES 13 A 214 ASN GLY LYS ILE SER VAL ASP GLU LEU ALA SER VAL PHE SEQRES 14 A 214 GLY LEU ASP HIS LEU GLU SER LYS THR TRP LYS GLU MET SEQRES 15 A 214 ILE SER GLY ILE ASP SER ASN ASN ASP GLY ASP VAL ASP SEQRES 16 A 214 PHE GLU GLU PHE CYS LYS MET ILE GLN LYS LEU CYS SER SEQRES 17 A 214 ASN ASN GLU PRO GLN LEU SEQRES 1 B 214 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 B 214 LEU TYR PHE GLN GLY LYS GLU SER GLY ILE GLU LEU PRO SEQRES 3 B 214 SER LEU ALA ASN ALA ILE GLU ASN MET ARG LYS PHE GLN SEQRES 4 B 214 ASN SER GLN LYS LEU ALA GLN ALA ALA LEU LEU TYR MET SEQRES 5 B 214 ALA SER LYS LEU THR SER GLN GLU GLU THR LYS GLU LEU SEQRES 6 B 214 THR ASP ILE PHE ARG HIS ILE ASP LYS ASN GLY ASP GLY SEQRES 7 B 214 GLN LEU ASP ARG GLN GLU LEU ILE ASP GLY TYR SER LYS SEQRES 8 B 214 LEU SER GLY GLU GLU VAL ALA VAL PHE ASP LEU PRO GLN SEQRES 9 B 214 ILE GLU SER GLU VAL ASP ALA ILE LEU GLY ALA ALA ASP SEQRES 10 B 214 PHE ASP ARG ASN GLY TYR ILE ASP TYR SER GLU PHE VAL SEQRES 11 B 214 THR VAL ALA MET ASP ARG LYS SER LEU LEU SER LYS ASP SEQRES 12 B 214 LYS LEU GLU SER ALA PHE GLN LYS PHE ASP GLN ASP GLY SEQRES 13 B 214 ASN GLY LYS ILE SER VAL ASP GLU LEU ALA SER VAL PHE SEQRES 14 B 214 GLY LEU ASP HIS LEU GLU SER LYS THR TRP LYS GLU MET SEQRES 15 B 214 ILE SER GLY ILE ASP SER ASN ASN ASP GLY ASP VAL ASP SEQRES 16 B 214 PHE GLU GLU PHE CYS LYS MET ILE GLN LYS LEU CYS SER SEQRES 17 B 214 ASN ASN GLU PRO GLN LEU HET CA A 1 1 HET CA A 2 1 HET CA A 3 1 HET CA A 8 1 HET GOL A 521 6 HET CA B 4 1 HET CA B 5 1 HET CA B 6 1 HET CA B 7 1 HET 1PE B 1 13 HET GOL B 2 6 HET GOL B 521 6 HET GOL B 522 6 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN 1PE PEG400 FORMUL 3 CA 8(CA 2+) FORMUL 7 GOL 4(C3 H8 O3) FORMUL 12 1PE C10 H22 O6 FORMUL 16 HOH *135(H2 O) HELIX 1 1 LEU A 331 LEU A 362 1 32 HELIX 2 2 THR A 368 ASP A 379 1 12 HELIX 3 3 ASP A 387 GLY A 394 1 8 HELIX 4 4 GLY A 394 SER A 399 1 6 HELIX 5 5 ALA A 404 PHE A 406 5 3 HELIX 6 6 ASP A 407 ASP A 423 1 17 HELIX 7 7 TYR A 432 MET A 440 1 9 HELIX 8 8 ASP A 441 LEU A 446 1 6 HELIX 9 9 SER A 447 ASP A 459 1 13 HELIX 10 10 SER A 467 PHE A 475 1 9 HELIX 11 11 GLU A 481 ILE A 489 1 9 HELIX 12 12 PHE A 502 SER A 514 1 13 HELIX 13 13 LEU B 331 LEU B 362 1 32 HELIX 14 14 THR B 368 ASP B 379 1 12 HELIX 15 15 ASP B 387 GLY B 394 1 8 HELIX 16 16 GLY B 394 SER B 399 1 6 HELIX 17 17 ALA B 404 PHE B 406 5 3 HELIX 18 18 ASP B 407 ASP B 423 1 17 HELIX 19 19 TYR B 432 MET B 440 1 9 HELIX 20 20 ASP B 441 LEU B 446 1 6 HELIX 21 21 SER B 447 ASP B 459 1 13 HELIX 22 22 SER B 467 PHE B 475 1 9 HELIX 23 23 THR B 484 ILE B 489 1 6 HELIX 24 24 PHE B 502 SER B 514 1 13 SHEET 1 A 2 GLN A 385 LEU A 386 0 SHEET 2 A 2 ILE A 430 ASP A 431 -1 O ILE A 430 N LEU A 386 SHEET 1 B 2 LYS A 465 ILE A 466 0 SHEET 2 B 2 VAL A 500 ASP A 501 -1 O VAL A 500 N ILE A 466 SHEET 1 C 2 GLN B 385 LEU B 386 0 SHEET 2 C 2 ILE B 430 ASP B 431 -1 O ILE B 430 N LEU B 386 SHEET 1 D 2 LYS B 465 ILE B 466 0 SHEET 2 D 2 VAL B 500 ASP B 501 -1 O VAL B 500 N ILE B 466 LINK CA CA A 1 OD1 ASP A 423 1555 1555 2.09 LINK CA CA A 1 OD1 ASP A 425 1555 1555 2.24 LINK CA CA A 1 OD1 ASN A 427 1555 1555 2.49 LINK CA CA A 1 O TYR A 429 1555 1555 2.35 LINK CA CA A 1 OE2 GLU A 434 1555 1555 2.43 LINK CA CA A 1 OE1 GLU A 434 1555 1555 2.60 LINK CA CA A 2 O HOH A 146 1555 1555 2.70 LINK CA CA A 2 OD1 ASP A 459 1555 1555 2.25 LINK CA CA A 2 OD2 ASP A 461 1555 1555 2.36 LINK CA CA A 2 OD1 ASN A 463 1555 1555 2.35 LINK CA CA A 2 O LYS A 465 1555 1555 2.39 LINK CA CA A 2 OE2 GLU A 470 1555 1555 2.26 LINK CA CA A 2 OE1 GLU A 470 1555 1555 2.31 LINK CA CA A 3 O HOH A 98 1555 1555 2.16 LINK CA CA A 3 OD2 ASP A 493 1555 1555 2.15 LINK CA CA A 3 OD1 ASN A 495 1555 1555 2.59 LINK CA CA A 3 OD1 ASP A 497 1555 1555 2.68 LINK CA CA A 3 O ASP A 499 1555 1555 2.28 LINK CA CA A 3 OE1 GLU A 504 1555 1555 2.43 LINK CA CA A 3 OE2 GLU A 504 1555 1555 2.59 LINK CA CA A 8 O HOH A 87 1555 1555 2.19 LINK CA CA A 8 OD1 ASP A 379 1555 1555 2.12 LINK CA CA A 8 OD1 ASN A 381 1555 1555 2.31 LINK CA CA A 8 OD2 ASP A 383 1555 1555 2.25 LINK CA CA A 8 O GLN A 385 1555 1555 2.35 LINK CA CA A 8 OE2 GLU A 390 1555 1555 2.31 LINK CA CA A 8 OE1 GLU A 390 1555 1555 2.73 LINK CA CA B 4 OD1 ASP B 423 1555 1555 2.15 LINK CA CA B 4 OD1 ASP B 425 1555 1555 2.28 LINK CA CA B 4 OD1 ASN B 427 1555 1555 2.44 LINK CA CA B 4 O TYR B 429 1555 1555 2.34 LINK CA CA B 4 OE2 GLU B 434 1555 1555 2.46 LINK CA CA B 4 OE1 GLU B 434 1555 1555 2.59 LINK CA CA B 5 O HOH B 59 1555 1555 2.16 LINK CA CA B 5 OD1 ASP B 379 1555 1555 2.28 LINK CA CA B 5 OD1 ASN B 381 1555 1555 2.40 LINK CA CA B 5 OD2 ASP B 383 1555 1555 2.30 LINK CA CA B 5 O GLN B 385 1555 1555 2.32 LINK CA CA B 5 OE2 GLU B 390 1555 1555 2.21 LINK CA CA B 5 OE1 GLU B 390 1555 1555 2.71 LINK CA CA B 6 O HOH B 64 1555 1555 2.46 LINK CA CA B 6 OD1 ASP B 459 1555 1555 2.36 LINK CA CA B 6 OD2 ASP B 461 1555 1555 2.31 LINK CA CA B 6 OD1 ASN B 463 1555 1555 2.33 LINK CA CA B 6 O LYS B 465 1555 1555 2.41 LINK CA CA B 6 OE2 GLU B 470 1555 1555 2.29 LINK CA CA B 6 OE1 GLU B 470 1555 1555 2.32 LINK CA CA B 7 O HOH B 58 1555 1555 2.04 LINK CA CA B 7 OD1 ASP B 493 1555 1555 2.22 LINK CA CA B 7 OD1 ASN B 495 1555 1555 2.32 LINK CA CA B 7 OD1 ASP B 497 1555 1555 2.57 LINK CA CA B 7 O ASP B 499 1555 1555 2.45 LINK CA CA B 7 OE2 GLU B 504 1555 1555 2.53 LINK CA CA B 7 OE1 GLU B 504 1555 1555 2.55 SITE 1 AC1 5 ASP A 423 ASP A 425 ASN A 427 TYR A 429 SITE 2 AC1 5 GLU A 434 SITE 1 AC2 6 HOH A 146 ASP A 459 ASP A 461 ASN A 463 SITE 2 AC2 6 LYS A 465 GLU A 470 SITE 1 AC3 6 HOH A 98 ASP A 493 ASN A 495 ASP A 497 SITE 2 AC3 6 ASP A 499 GLU A 504 SITE 1 AC4 6 HOH A 87 ASP A 379 ASN A 381 ASP A 383 SITE 2 AC4 6 GLN A 385 GLU A 390 SITE 1 AC5 3 HOH A 27 ARG A 376 GLY A 384 SITE 1 AC6 5 ASP B 423 ASP B 425 ASN B 427 TYR B 429 SITE 2 AC6 5 GLU B 434 SITE 1 AC7 6 HOH B 59 ASP B 379 ASN B 381 ASP B 383 SITE 2 AC7 6 GLN B 385 GLU B 390 SITE 1 AC8 6 HOH B 64 ASP B 459 ASP B 461 ASN B 463 SITE 2 AC8 6 LYS B 465 GLU B 470 SITE 1 AC9 6 HOH B 58 ASP B 493 ASN B 495 ASP B 497 SITE 2 AC9 6 ASP B 499 GLU B 504 SITE 1 BC1 9 HOH A 117 THR A 363 GLN A 365 SER B 360 SITE 2 BC1 9 LYS B 361 THR B 363 GLN B 365 TYR B 432 SITE 3 BC1 9 SER B 433 SITE 1 BC2 6 HOH B 43 HOH B 154 PRO B 332 GLU B 370 SITE 2 BC2 6 MET B 440 ASP B 441 SITE 1 BC3 3 HOH B 88 VAL B 468 GLU B 481 SITE 1 BC4 3 HOH B 86 ASP B 423 ARG B 426 CRYST1 92.570 64.187 72.807 90.00 97.86 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010803 0.000000 0.001491 0.00000 SCALE2 0.000000 0.015579 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013865 0.00000