PDB Short entry for 3L82 HEADER CELL CYCLE 29-DEC-09 3L82 TITLE X-RAY CRYSTAL STRUCTURE OF TRF1 AND FBX4 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TELOMERIC REPEAT-BINDING FACTOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DIMERIZATION DOMAIN RESIDUES 58-268; COMPND 5 SYNONYM: TTAGGG REPEAT-BINDING FACTOR 1, NIMA-INTERACTING PROTEIN 2, COMPND 6 TELOMERIC PROTEIN PIN2/TRF1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: F-BOX ONLY PROTEIN 4; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: F-BOX DOMAIN RESIDUES 162-387; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TERF1, PIN2, TRBF1, TRF, TRF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: FBXO4, FBX4; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS TRFH DOMAIN, HELIX, GTPASE DOMAIN, ADP-RIBOSYLATION, CELL CYCLE, CELL KEYWDS 2 DIVISION, CHROMOSOMAL PROTEIN, CYTOSKELETON, DNA-BINDING, MITOSIS, KEYWDS 3 NUCLEUS, PHOSPHOPROTEIN, TELOMERE, UBL CONJUGATION PATHWAY EXPDTA X-RAY DIFFRACTION AUTHOR Z.X.ZENG,W.WANG,Y.T.YANG,Y.CHEN,X.M.YANG,J.A.DIEHL,X.D.LIU,M.LEI REVDAT 2 25-SEP-13 3L82 1 REMARK VERSN REVDAT 1 09-MAR-10 3L82 0 JRNL AUTH Z.ZENG,W.WANG,Y.YANG,Y.CHEN,X.YANG,J.A.DIEHL,X.LIU,M.LEI JRNL TITL STRUCTURAL BASIS OF SELECTIVE UBIQUITINATION OF TRF1 BY JRNL TITL 2 SCF(FBX4) JRNL REF DEV.CELL V. 18 214 2010 JRNL REFN ISSN 1534-5807 JRNL PMID 20159592 JRNL DOI 10.1016/J.DEVCEL.2010.01.007 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 19553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3742 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3077 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 60 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.60300 REMARK 3 B22 (A**2) : -7.60300 REMARK 3 B33 (A**2) : 15.20600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.29 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3L82 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JAN-10. REMARK 100 THE RCSB ID CODE IS RCSB056950. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792, 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21197 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 11.400 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 54.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 300 MM NH4H2PO4, 100 MM SODIUM CITRATE REMARK 280 PH 6.2, 10% N-PROPANOL AND 10 MM DTT, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 117.21050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.04850 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.04850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 175.81575 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.04850 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.04850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 58.60525 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.04850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.04850 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 175.81575 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.04850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.04850 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 58.60525 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 117.21050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 68.09700 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -68.09700 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 34.04850 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -34.04850 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -58.60525 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 34.04850 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 -34.04850 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 58.60525 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 34.04850 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -34.04850 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -58.60525 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 54 REMARK 465 LEU A 55 REMARK 465 GLY A 56 REMARK 465 SER A 57 REMARK 465 GLU A 58 REMARK 465 GLU A 59 REMARK 465 GLU A 60 REMARK 465 GLU A 61 REMARK 465 GLU A 62 REMARK 465 ASP A 63 REMARK 465 LYS A 267 REMARK 465 ARG A 268 REMARK 465 SER B 161 REMARK 465 GLY B 162 REMARK 465 ALA B 163 REMARK 465 THR B 240 REMARK 465 ARG B 241 REMARK 465 LYS B 242 REMARK 465 GLU B 243 REMARK 465 ARG B 244 REMARK 465 ASP B 245 REMARK 465 ARG B 246 REMARK 465 ALA B 247 REMARK 465 ARG B 248 REMARK 465 GLU B 249 REMARK 465 GLU B 250 REMARK 465 HIS B 251 REMARK 465 THR B 252 REMARK 465 SER B 253 REMARK 465 ALA B 254 REMARK 465 VAL B 255 REMARK 465 ASN B 256 REMARK 465 LYS B 257 REMARK 465 MSE B 258 REMARK 465 PHE B 259 REMARK 465 SER B 260 REMARK 465 ARG B 261 REMARK 465 HIS B 262 REMARK 465 ASN B 263 REMARK 465 GLU B 264 REMARK 465 GLY B 265 REMARK 465 ASP B 266 REMARK 465 ASP B 267 REMARK 465 GLN B 268 REMARK 465 GLN B 269 REMARK 465 GLY B 270 REMARK 465 SER B 271 REMARK 465 ARG B 272 REMARK 465 TYR B 273 REMARK 465 SER B 274 REMARK 465 VAL B 275 REMARK 465 ILE B 276 REMARK 465 ARG B 385 REMARK 465 ALA B 386 REMARK 465 ARG B 387 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU B 202 N - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 203 113.21 174.59 REMARK 500 PRO A 204 84.59 -58.67 REMARK 500 MSE A 208 118.07 60.61 REMARK 500 LYS A 221 79.68 -53.45 REMARK 500 ASP A 222 139.52 -171.13 REMARK 500 THR A 223 109.18 -54.03 REMARK 500 PHE A 231 51.86 -146.22 REMARK 500 GLU B 187 -30.16 -148.77 REMARK 500 SER B 199 41.90 -70.51 REMARK 500 GLU B 202 -23.91 103.04 REMARK 500 CYS B 204 73.90 -111.28 REMARK 500 ASP B 215 116.69 2.95 REMARK 500 ASN B 226 42.45 -158.99 REMARK 500 ASN B 227 -26.56 73.68 REMARK 500 HIS B 298 2.15 -61.03 REMARK 500 GLU B 302 63.46 -116.20 REMARK 500 THR B 314 71.73 -110.69 REMARK 500 SER B 320 178.69 -55.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 71 DISTANCE = 23.03 ANGSTROMS REMARK 525 HOH B 75 DISTANCE = 23.13 ANGSTROMS REMARK 525 HOH B 81 DISTANCE = 19.15 ANGSTROMS DBREF 3L82 A 58 268 UNP P54274 TERF1_HUMAN 58 268 DBREF 3L82 B 162 387 UNP Q9UKT5 FBX4_HUMAN 162 387 SEQADV 3L82 PRO A 54 UNP P54274 EXPRESSION TAG SEQADV 3L82 LEU A 55 UNP P54274 EXPRESSION TAG SEQADV 3L82 GLY A 56 UNP P54274 EXPRESSION TAG SEQADV 3L82 SER A 57 UNP P54274 EXPRESSION TAG SEQADV 3L82 SER B 161 UNP Q9UKT5 EXPRESSION TAG SEQRES 1 A 215 PRO LEU GLY SER GLU GLU GLU GLU GLU ASP ALA GLY LEU SEQRES 2 A 215 VAL ALA GLU ALA GLU ALA VAL ALA ALA GLY TRP MSE LEU SEQRES 3 A 215 ASP PHE LEU CYS LEU SER LEU CYS ARG ALA PHE ARG ASP SEQRES 4 A 215 GLY ARG SER GLU ASP PHE ARG ARG THR ARG ASN SER ALA SEQRES 5 A 215 GLU ALA ILE ILE HIS GLY LEU SER SER LEU THR ALA CYS SEQRES 6 A 215 GLN LEU ARG THR ILE TYR ILE CYS GLN PHE LEU THR ARG SEQRES 7 A 215 ILE ALA ALA GLY LYS THR LEU ASP ALA GLN PHE GLU ASN SEQRES 8 A 215 ASP GLU ARG ILE THR PRO LEU GLU SER ALA LEU MSE ILE SEQRES 9 A 215 TRP GLY SER ILE GLU LYS GLU HIS ASP LYS LEU HIS GLU SEQRES 10 A 215 GLU ILE GLN ASN LEU ILE LYS ILE GLN ALA ILE ALA VAL SEQRES 11 A 215 CYS MSE GLU ASN GLY ASN PHE LYS GLU ALA GLU GLU VAL SEQRES 12 A 215 PHE GLU ARG ILE PHE GLY ASP PRO ASN SER HIS MSE PRO SEQRES 13 A 215 PHE LYS SER LYS LEU LEU MSE ILE ILE SER GLN LYS ASP SEQRES 14 A 215 THR PHE HIS SER PHE PHE GLN HIS PHE SER TYR ASN HIS SEQRES 15 A 215 MSE MSE GLU LYS ILE LYS SER TYR VAL ASN TYR VAL LEU SEQRES 16 A 215 SER GLU LYS SER SER THR PHE LEU MSE LYS ALA ALA ALA SEQRES 17 A 215 LYS VAL VAL GLU SER LYS ARG SEQRES 1 B 227 SER GLY ALA VAL THR SER PHE LEU HIS SER LEU ILE ILE SEQRES 2 B 227 GLN ASN GLU PRO ARG PHE ALA MSE PHE GLY PRO GLY LEU SEQRES 3 B 227 GLU GLU LEU ASN THR SER LEU VAL LEU SER LEU MSE SER SEQRES 4 B 227 SER GLU GLU LEU CYS PRO THR ALA GLY LEU PRO GLN ARG SEQRES 5 B 227 GLN ILE ASP GLY ILE GLY SER GLY VAL ASN PHE GLN LEU SEQRES 6 B 227 ASN ASN GLN HIS LYS PHE ASN ILE LEU ILE LEU TYR SER SEQRES 7 B 227 THR THR ARG LYS GLU ARG ASP ARG ALA ARG GLU GLU HIS SEQRES 8 B 227 THR SER ALA VAL ASN LYS MSE PHE SER ARG HIS ASN GLU SEQRES 9 B 227 GLY ASP ASP GLN GLN GLY SER ARG TYR SER VAL ILE PRO SEQRES 10 B 227 GLN ILE GLN LYS VAL CYS GLU VAL VAL ASP GLY PHE ILE SEQRES 11 B 227 TYR VAL ALA ASN ALA GLU ALA HIS LYS ARG HIS GLU TRP SEQRES 12 B 227 GLN ASP GLU PHE SER HIS ILE MSE ALA MSE THR ASP PRO SEQRES 13 B 227 ALA PHE GLY SER SER GLY ARG PRO LEU LEU VAL LEU SER SEQRES 14 B 227 CYS ILE SER GLN GLY ASP VAL LYS ARG MSE PRO CYS PHE SEQRES 15 B 227 TYR LEU ALA HIS GLU LEU HIS LEU ASN LEU LEU ASN HIS SEQRES 16 B 227 PRO TRP LEU VAL GLN ASP THR GLU ALA GLU THR LEU THR SEQRES 17 B 227 GLY PHE LEU ASN GLY ILE GLU TRP ILE LEU GLU GLU VAL SEQRES 18 B 227 GLU SER LYS ARG ALA ARG MODRES 3L82 MSE A 78 MET SELENOMETHIONINE MODRES 3L82 MSE A 156 MET SELENOMETHIONINE MODRES 3L82 MSE A 185 MET SELENOMETHIONINE MODRES 3L82 MSE A 208 MET SELENOMETHIONINE MODRES 3L82 MSE A 216 MET SELENOMETHIONINE MODRES 3L82 MSE A 236 MET SELENOMETHIONINE MODRES 3L82 MSE A 237 MET SELENOMETHIONINE MODRES 3L82 MSE A 257 MET SELENOMETHIONINE MODRES 3L82 MSE B 181 MET SELENOMETHIONINE MODRES 3L82 MSE B 198 MET SELENOMETHIONINE MODRES 3L82 MSE B 311 MET SELENOMETHIONINE MODRES 3L82 MSE B 313 MET SELENOMETHIONINE MODRES 3L82 MSE B 339 MET SELENOMETHIONINE HET MSE A 78 8 HET MSE A 156 8 HET MSE A 185 8 HET MSE A 208 8 HET MSE A 216 8 HET MSE A 236 8 HET MSE A 237 8 HET MSE A 257 8 HET MSE B 181 8 HET MSE B 198 8 HET MSE B 311 8 HET MSE B 313 8 HET MSE B 339 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 13(C5 H11 N O2 SE) FORMUL 3 HOH *60(H2 O) HELIX 1 1 GLY A 65 GLY A 93 1 29 HELIX 2 2 ARG A 94 GLY A 111 1 18 HELIX 3 3 THR A 116 ALA A 133 1 18 HELIX 4 4 THR A 149 ILE A 161 1 13 HELIX 5 5 HIS A 165 GLU A 186 1 22 HELIX 6 6 ASN A 189 PHE A 201 1 13 HELIX 7 7 PHE A 210 GLN A 220 1 11 HELIX 8 8 PHE A 224 GLN A 229 1 6 HELIX 9 9 SER A 232 SER A 252 1 21 HELIX 10 10 THR A 254 SER A 266 1 13 HELIX 11 11 GLY B 183 GLU B 187 5 5 HELIX 12 12 SER B 192 SER B 199 1 8 HELIX 13 13 LEU B 209 GLN B 213 5 5 HELIX 14 14 GLN B 278 VAL B 286 1 9 HELIX 15 15 GLU B 302 THR B 314 1 13 HELIX 16 16 PRO B 340 LEU B 348 1 9 HELIX 17 17 HIS B 349 ASN B 354 5 6 HELIX 18 18 GLY B 369 LEU B 378 1 10 SHEET 1 A 8 SER A 114 LEU A 115 0 SHEET 2 A 8 TRP B 357 GLU B 363 -1 O VAL B 359 N LEU A 115 SHEET 3 A 8 LEU B 325 ILE B 331 1 N SER B 329 O THR B 362 SHEET 4 A 8 GLY B 288 ASN B 294 1 N ALA B 293 O LEU B 328 SHEET 5 A 8 ARG B 178 PHE B 182 1 N ALA B 180 O ILE B 290 SHEET 6 A 8 LYS B 230 ILE B 235 1 O LEU B 234 N PHE B 179 SHEET 7 A 8 VAL B 221 GLN B 224 -1 N VAL B 221 O ILE B 233 SHEET 8 A 8 THR B 206 ALA B 207 -1 N THR B 206 O ASN B 222 LINK C TRP A 77 N MSE A 78 1555 1555 1.33 LINK C MSE A 78 N LEU A 79 1555 1555 1.33 LINK C LEU A 155 N MSE A 156 1555 1555 1.33 LINK C MSE A 156 N ILE A 157 1555 1555 1.33 LINK C CYS A 184 N MSE A 185 1555 1555 1.33 LINK C MSE A 185 N GLU A 186 1555 1555 1.33 LINK C HIS A 207 N MSE A 208 1555 1555 1.34 LINK C MSE A 208 N PRO A 209 1555 1555 1.34 LINK C LEU A 215 N MSE A 216 1555 1555 1.33 LINK C MSE A 216 N ILE A 217 1555 1555 1.33 LINK C HIS A 235 N MSE A 236 1555 1555 1.33 LINK C MSE A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N GLU A 238 1555 1555 1.33 LINK C LEU A 256 N MSE A 257 1555 1555 1.33 LINK C MSE A 257 N LYS A 258 1555 1555 1.33 LINK C ALA B 180 N MSE B 181 1555 1555 1.33 LINK C MSE B 181 N PHE B 182 1555 1555 1.33 LINK C LEU B 197 N MSE B 198 1555 1555 1.33 LINK C MSE B 198 N SER B 199 1555 1555 1.32 LINK C ILE B 310 N MSE B 311 1555 1555 1.33 LINK C MSE B 311 N ALA B 312 1555 1555 1.33 LINK C ALA B 312 N MSE B 313 1555 1555 1.33 LINK C MSE B 313 N THR B 314 1555 1555 1.33 LINK C ARG B 338 N MSE B 339 1555 1555 1.32 LINK C MSE B 339 N PRO B 340 1555 1555 1.35 CRYST1 68.097 68.097 234.421 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014685 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004266 0.00000