PDB Short entry for 3LDB HEADER IMMUNE SYSTEM 12-JAN-10 3LDB TITLE STRUCTURE OF JMJD6 COMPLEXD WITH ALPHA-KETOGLUTARATE AND FAB FRAGMENT. COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE COMPND 3 JMJD6; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: HISTONE ARGININE DEMETHYLASE JMJD6, PEPTIDE-LYSINE 5- COMPND 6 DIOXYGENASE JMJD6, LYSYL-HYDROXYLASE JMJD6, JMJC DOMAIN-CONTAINING COMPND 7 PROTEIN 6, JUMONJI DOMAIN-CONTAINING PROTEIN 6, PHOSPHATIDYLSERINE COMPND 8 RECEPTOR, PROTEIN PTDSR; COMPND 9 EC: 1.14.11.-; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: ANTIBODY FAB FRAGMENT LIGHT CHAIN; COMPND 13 CHAIN: B; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: ANTIBODY FAB FRAGMENT HEAVY CHAIN; COMPND 17 CHAIN: C; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JMJD6, JMJD6 (1-403), KIAA0585, PTDSR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23B; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: CRICETULUS MIGRATORIUS; SOURCE 13 ORGANISM_TAXID: 10032; SOURCE 14 CELL: HYBRIDOMA; SOURCE 15 EXPRESSION_SYSTEM: CRICETULUS MIGRATORIUS; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 10032; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: CRICETULUS MIGRATORIUS; SOURCE 19 ORGANISM_TAXID: 10032; SOURCE 20 CELL: HYBRIDOMA; SOURCE 21 EXPRESSION_SYSTEM: CRICETULUS MIGRATORIUS; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 10032 KEYWDS JMJ6D, ALPHA-KETOGLUTARATE, FAB FRAGMENTS, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR X.HONG,J.ZANG,J.WHITE,J.W.KAPPLER,C.WANG,G.ZHANG REVDAT 3 06-SEP-23 3LDB 1 REMARK LINK REVDAT 2 20-JUN-12 3LDB 1 JRNL VERSN REVDAT 1 04-AUG-10 3LDB 0 JRNL AUTH X.HONG,J.ZANG,J.WHITE,C.WANG,C.H.PAN,R.ZHAO,R.C.MURPHY, JRNL AUTH 2 S.DAI,P.HENSON,J.W.KAPPLER,J.HAGMAN,G.ZHANG JRNL TITL INTERACTION OF JMJD6 WITH SINGLE-STRANDED RNA. JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 14568 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 20679243 JRNL DOI 10.1073/PNAS.1008832107 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 3487182.740 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 81.7 REMARK 3 NUMBER OF REFLECTIONS : 40520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2024 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 36.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2861 REMARK 3 BIN R VALUE (WORKING SET) : 0.4270 REMARK 3 BIN FREE R VALUE : 0.4540 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 135 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.039 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6072 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 138 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 66.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.72000 REMARK 3 B22 (A**2) : 10.72000 REMARK 3 B33 (A**2) : -21.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.48 REMARK 3 ESD FROM SIGMAA (A) : 0.86 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.55 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.76 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.020 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 5.970 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 7.840 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.110 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.150 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 58.79 REMARK 3 REMARK 3 NCS MODEL : NONE REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : GOL.PAR REMARK 3 PARAMETER FILE 4 : AKG.PAR REMARK 3 PARAMETER FILE 5 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : GOL.TOP REMARK 3 TOPOLOGY FILE 4 : AKG.TOP REMARK 3 TOPOLOGY FILE 5 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3LDB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000057136. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-05; 10-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ALS; ALS REMARK 200 BEAMLINE : 8.2.1; 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 1.0 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48696 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.610 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRIES 3LD8, JMJD6, AND FAB FRAGMENT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS(2-HYDROXYETHYL)-AMINO REMARK 280 -TRIS(HYDROXYMETHYL)-METHANE, 2.1 M AMMONIUM SULPHATE, PH 5.6, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.81100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 69.19050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 69.19050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.90550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 69.19050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 69.19050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 137.71650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 69.19050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 69.19050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.90550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 69.19050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 69.19050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 137.71650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 91.81100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN B 218 REMARK 465 GLU B 219 REMARK 465 CYS B 220 REMARK 465 ALA C 132 REMARK 465 CYS C 133 REMARK 465 ASP C 134 REMARK 465 SER C 135 REMARK 465 THR C 136 REMARK 465 THR C 137 REMARK 465 SER C 138 REMARK 465 THR C 139 REMARK 465 THR C 140 REMARK 465 GLY C 220 REMARK 465 ASP C 221 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA B 57 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 5 CA SER A 5 CB 0.091 REMARK 500 SER A 5 CB SER A 5 OG 0.087 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 2 CB - CA - C ANGL. DEV. = -14.4 DEGREES REMARK 500 ASN A 2 N - CA - C ANGL. DEV. = 20.1 DEGREES REMARK 500 PRO A 141 C - N - CA ANGL. DEV. = 12.2 DEGREES REMARK 500 SER B 7 CB - CA - C ANGL. DEV. = -12.8 DEGREES REMARK 500 SER B 7 N - CA - C ANGL. DEV. = 16.6 DEGREES REMARK 500 PRO B 8 C - N - CA ANGL. DEV. = 11.6 DEGREES REMARK 500 PRO B 8 C - N - CD ANGL. DEV. = -20.3 DEGREES REMARK 500 ASN B 144 N - CA - C ANGL. DEV. = 21.5 DEGREES REMARK 500 GLY C 42 N - CA - C ANGL. DEV. = -26.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 2 -58.59 -144.98 REMARK 500 HIS A 3 -29.16 -143.71 REMARK 500 SER A 5 -58.80 -23.06 REMARK 500 ASN A 45 33.70 -143.37 REMARK 500 GLU A 77 119.44 -38.16 REMARK 500 ARG A 95 -53.81 -28.65 REMARK 500 CYS A 101 17.60 -142.93 REMARK 500 LYS A 145 -8.91 -57.73 REMARK 500 ASP A 159 72.13 37.56 REMARK 500 ARG A 181 -2.28 73.63 REMARK 500 VAL A 238 -60.90 -94.86 REMARK 500 ASP A 279 -176.22 -177.95 REMARK 500 PRO A 306 -73.82 -40.74 REMARK 500 GLN A 333 22.59 -63.03 REMARK 500 SER B 32 -177.34 -68.01 REMARK 500 ALA B 57 -58.56 75.48 REMARK 500 SER B 83 66.70 61.12 REMARK 500 PRO B 126 80.06 -66.51 REMARK 500 ALA B 136 115.35 -169.50 REMARK 500 ASN B 144 29.49 41.97 REMARK 500 PRO B 147 -166.30 -74.05 REMARK 500 ASP B 157 -70.44 -125.27 REMARK 500 ASP B 163 -88.75 -82.46 REMARK 500 ASN B 196 -76.13 -98.19 REMARK 500 THR B 206 -92.20 -52.86 REMARK 500 THR B 208 84.42 -69.20 REMARK 500 ALA B 209 48.83 35.34 REMARK 500 PRO C 14 144.13 -36.07 REMARK 500 LYS C 43 91.29 175.14 REMARK 500 PRO C 61 -33.74 -39.56 REMARK 500 SER C 62 -99.51 -64.78 REMARK 500 LEU C 63 78.18 -64.96 REMARK 500 ASP C 89 4.34 -68.12 REMARK 500 ALA C 119 160.10 -41.53 REMARK 500 LEU C 145 -159.06 -103.83 REMARK 500 LEU C 148 107.81 -165.06 REMARK 500 PHE C 153 140.44 -179.59 REMARK 500 SER C 163 -150.82 58.80 REMARK 500 LEU C 166 79.80 -68.09 REMARK 500 THR C 167 -78.57 -49.62 REMARK 500 HIS C 178 -58.93 -137.20 REMARK 500 SER C 193 -95.75 -56.70 REMARK 500 THR C 194 51.04 -54.10 REMARK 500 TRP C 195 -73.98 -99.38 REMARK 500 SER C 197 36.67 -86.47 REMARK 500 SER C 210 43.70 31.29 REMARK 500 LYS C 212 66.99 -155.88 REMARK 500 LYS C 215 104.42 -168.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MET A 1 ASN A 2 76.96 REMARK 500 ASN A 2 HIS A 3 146.81 REMARK 500 GLN B 6 SER B 7 -134.08 REMARK 500 SER B 7 PRO B 8 144.19 REMARK 500 VAL B 156 ASP B 157 117.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 187 NE2 REMARK 620 2 HIS A 273 NE2 91.5 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 335 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 336 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 337 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 338 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 221 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 339 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 222 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 341 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 342 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 343 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 222 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 344 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 345 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 346 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 347 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 348 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 349 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 350 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 223 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 223 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 224 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 351 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 224 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 352 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 353 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LD8 RELATED DB: PDB REMARK 900 STRUCTURE OF JMJD6 AND FAB FRAGMENT DBREF 3LDB A 1 334 UNP Q6NYC1 JMJD6_HUMAN 1 334 DBREF 3LDB B 1 220 PDB 3LDB 3LDB 1 220 DBREF 3LDB C 1 221 PDB 3LDB 3LDB 1 221 SEQRES 1 A 334 MET ASN HIS LYS SER LYS LYS ARG ILE ARG GLU ALA LYS SEQRES 2 A 334 ARG SER ALA ARG PRO GLU LEU LYS ASP SER LEU ASP TRP SEQRES 3 A 334 THR ARG HIS ASN TYR TYR GLU SER PHE SER LEU SER PRO SEQRES 4 A 334 ALA ALA VAL ALA ASP ASN VAL GLU ARG ALA ASP ALA LEU SEQRES 5 A 334 GLN LEU SER VAL GLU GLU PHE VAL GLU ARG TYR GLU ARG SEQRES 6 A 334 PRO TYR LYS PRO VAL VAL LEU LEU ASN ALA GLN GLU GLY SEQRES 7 A 334 TRP SER ALA GLN GLU LYS TRP THR LEU GLU ARG LEU LYS SEQRES 8 A 334 ARG LYS TYR ARG ASN GLN LYS PHE LYS CYS GLY GLU ASP SEQRES 9 A 334 ASN ASP GLY TYR SER VAL LYS MET LYS MET LYS TYR TYR SEQRES 10 A 334 ILE GLU TYR MET GLU SER THR ARG ASP ASP SER PRO LEU SEQRES 11 A 334 TYR ILE PHE ASP SER SER TYR GLY GLU HIS PRO LYS ARG SEQRES 12 A 334 ARG LYS LEU LEU GLU ASP TYR LYS VAL PRO LYS PHE PHE SEQRES 13 A 334 THR ASP ASP LEU PHE GLN TYR ALA GLY GLU LYS ARG ARG SEQRES 14 A 334 PRO PRO TYR ARG TRP PHE VAL MET GLY PRO PRO ARG SER SEQRES 15 A 334 GLY THR GLY ILE HIS ILE ASP PRO LEU GLY THR SER ALA SEQRES 16 A 334 TRP ASN ALA LEU VAL GLN GLY HIS LYS ARG TRP CYS LEU SEQRES 17 A 334 PHE PRO THR SER THR PRO ARG GLU LEU ILE LYS VAL THR SEQRES 18 A 334 ARG ASP GLU GLY GLY ASN GLN GLN ASP GLU ALA ILE THR SEQRES 19 A 334 TRP PHE ASN VAL ILE TYR PRO ARG THR GLN LEU PRO THR SEQRES 20 A 334 TRP PRO PRO GLU PHE LYS PRO LEU GLU ILE LEU GLN LYS SEQRES 21 A 334 PRO GLY GLU THR VAL PHE VAL PRO GLY GLY TRP TRP HIS SEQRES 22 A 334 VAL VAL LEU ASN LEU ASP THR THR ILE ALA ILE THR GLN SEQRES 23 A 334 ASN PHE ALA SER SER THR ASN PHE PRO VAL VAL TRP HIS SEQRES 24 A 334 LYS THR VAL ARG GLY ARG PRO LYS LEU SER ARG LYS TRP SEQRES 25 A 334 TYR ARG ILE LEU LYS GLN GLU HIS PRO GLU LEU ALA VAL SEQRES 26 A 334 LEU ALA ASP SER VAL ASP LEU GLN GLU SEQRES 1 B 220 ASP ILE VAL MET THR GLN SER PRO SER SER LEU ALA VAL SEQRES 2 B 220 SER ALA GLY GLU LYS VAL THR MET SER CYS ARG SER SER SEQRES 3 B 220 GLN SER LEU TYR TYR SER GLY ILE LYS LYS ASN LEU LEU SEQRES 4 B 220 ALA TRP TYR GLN LEU LYS PRO GLY GLN SER PRO LYS LEU SEQRES 5 B 220 LEU ILE TYR TYR ALA SER THR LEU PHE THR GLY VAL PRO SEQRES 6 B 220 ASP ARG PHE THR GLY SER GLY SER GLY THR ASP TYR THR SEQRES 7 B 220 LEU THR ILE THR SER VAL GLN ALA GLU ASP MET GLY GLN SEQRES 8 B 220 TYR PHE CYS GLN GLN GLY ILE SER ASN PRO TYR THR PHE SEQRES 9 B 220 GLY ALA GLY THR LYS LEU GLU ILE LYS ARG ALA ASP ALA SEQRES 10 B 220 LYS PRO THR VAL SER ILE PHE PRO PRO SER SER GLU GLN SEQRES 11 B 220 LEU GLY THR GLY SER ALA THR LEU VAL CYS PHE VAL ASN SEQRES 12 B 220 ASN PHE TYR PRO LYS ASP ILE ASN VAL LYS TRP LYS VAL SEQRES 13 B 220 ASP GLY SER GLU LYS ARG ASP GLY VAL LEU GLN SER VAL SEQRES 14 B 220 THR ASP GLN ASP SER LYS ASP SER THR TYR SER LEU SER SEQRES 15 B 220 SER THR LEU SER LEU THR LYS ALA ASP TYR GLU ARG HIS SEQRES 16 B 220 ASN LEU TYR THR CYS GLU VAL THR HIS LYS THR SER THR SEQRES 17 B 220 ALA ALA ILE VAL LYS THR LEU ASN ARG ASN GLU CYS SEQRES 1 C 221 GLN ILE GLN LEU GLN GLU SER GLY PRO GLY LEU VAL THR SEQRES 2 C 221 PRO SER GLN SER LEU THR LEU THR CYS SER VAL THR GLY SEQRES 3 C 221 ASP SER ILE THR SER TYR HIS TRP SER TRP ILE ARG GLN SEQRES 4 C 221 PHE PRO GLY LYS LYS LEU GLU TRP MET GLY TYR ILE TYR SEQRES 5 C 221 ASN SER GLY GLY THR ASP TYR ASN PRO SER LEU LYS SER SEQRES 6 C 221 ARG VAL SER ILE THR ARG GLU ILE SER ARG ASN GLN LEU SEQRES 7 C 221 PHE LEU GLN LEU ASN SER VAL THR THR GLU ASP THR ALA SEQRES 8 C 221 THR TYR TYR CYS ALA ARG ARG ASP TYR GLY THR TYR TYR SEQRES 9 C 221 PHE ASP TYR TRP GLY GLN GLY THR MET VAL THR VAL SER SEQRES 10 C 221 SER ALA THR THR THR ALA PRO SER VAL TYR PRO LEU ALA SEQRES 11 C 221 PRO ALA CYS ASP SER THR THR SER THR THR ASN THR VAL SEQRES 12 C 221 THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO SEQRES 13 C 221 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 C 221 VAL HIS THR PHE PRO SER VAL LEU HIS SER GLY LEU TYR SEQRES 15 C 221 SER LEU SER SER SER VAL THR VAL PRO SER SER THR TRP SEQRES 16 C 221 PRO SER GLN THR VAL THR CYS ASN VAL ALA HIS PRO ALA SEQRES 17 C 221 SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO GLY ASP HET GOL A 335 6 HET GOL A 336 6 HET GOL A 337 6 HET GOL A 338 6 HET SO4 A 339 5 HET SO4 A 340 5 HET SO4 A 341 5 HET SO4 A 342 5 HET SO4 A 343 5 HET SO4 A 344 5 HET SO4 A 345 5 HET SO4 A 346 5 HET SO4 A 347 5 HET SO4 A 348 5 HET SO4 A 349 5 HET SO4 A 350 5 HET SO4 A 351 5 HET AKG A 600 10 HET FE A 601 1 HET HG A 352 1 HET HG A 353 1 HET GOL B 221 6 HET SO4 B 222 5 HET SO4 B 223 5 HET SO4 B 224 5 HET SO4 C 222 5 HET SO4 C 223 5 HET SO4 C 224 5 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM AKG 2-OXOGLUTARIC ACID HETNAM FE FE (III) ION HETNAM HG MERCURY (II) ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL 5(C3 H8 O3) FORMUL 8 SO4 19(O4 S 2-) FORMUL 21 AKG C5 H6 O5 FORMUL 22 FE FE 3+ FORMUL 23 HG 2(HG 2+) HELIX 1 1 HIS A 3 ARG A 17 1 15 HELIX 2 2 ASN A 30 PHE A 35 1 6 HELIX 3 3 SER A 38 VAL A 42 5 5 HELIX 4 4 SER A 55 TYR A 63 1 9 HELIX 5 5 SER A 80 TRP A 85 1 6 HELIX 6 6 THR A 86 ARG A 95 1 10 HELIX 7 7 MET A 114 GLU A 122 1 9 HELIX 8 8 LYS A 142 TYR A 150 5 9 HELIX 9 9 PRO A 153 THR A 157 5 5 HELIX 10 10 ASP A 159 GLY A 165 5 7 HELIX 11 11 ASP A 189 THR A 193 5 5 HELIX 12 12 PRO A 214 LYS A 219 1 6 HELIX 13 13 THR A 221 GLY A 226 1 6 HELIX 14 14 GLU A 231 ILE A 239 1 9 HELIX 15 15 ILE A 239 GLN A 244 1 6 HELIX 16 16 PRO A 249 LYS A 253 5 5 HELIX 17 17 ASN A 293 ARG A 305 1 13 HELIX 18 18 ARG A 305 HIS A 320 1 16 HELIX 19 19 HIS A 320 GLN A 333 1 14 HELIX 20 20 GLN B 85 MET B 89 5 5 HELIX 21 21 SER B 127 GLY B 132 1 6 HELIX 22 22 THR B 188 GLU B 193 1 6 HELIX 23 23 SER C 28 TYR C 32 5 5 HELIX 24 24 HIS C 206 SER C 210 5 5 SHEET 1 A 7 ARG A 48 ASP A 50 0 SHEET 2 A 7 VAL A 70 LEU A 73 1 O LEU A 73 N ALA A 49 SHEET 3 A 7 THR A 264 VAL A 267 -1 O THR A 264 N LEU A 72 SHEET 4 A 7 SER A 194 GLN A 201 -1 N ALA A 195 O VAL A 267 SHEET 5 A 7 THR A 281 PHE A 288 -1 O ILE A 284 N ALA A 198 SHEET 6 A 7 ARG A 173 GLY A 178 -1 N VAL A 176 O ALA A 283 SHEET 7 A 7 ILE A 132 ASP A 134 -1 N ILE A 132 O MET A 177 SHEET 1 B 2 LYS A 98 GLU A 103 0 SHEET 2 B 2 SER A 109 LYS A 113 -1 O VAL A 110 N CYS A 101 SHEET 1 C 4 GLY A 183 HIS A 187 0 SHEET 2 C 4 TRP A 272 ASN A 277 -1 O VAL A 275 N THR A 184 SHEET 3 C 4 LYS A 204 PHE A 209 -1 N ARG A 205 O LEU A 276 SHEET 4 C 4 LEU A 255 GLN A 259 -1 O ILE A 257 N TRP A 206 SHEET 1 D 4 THR B 5 GLN B 6 0 SHEET 2 D 4 VAL B 19 ARG B 24 -1 O ARG B 24 N THR B 5 SHEET 3 D 4 ASP B 76 ILE B 81 -1 O ILE B 81 N VAL B 19 SHEET 4 D 4 PHE B 68 SER B 73 -1 N THR B 69 O THR B 80 SHEET 1 E 6 SER B 10 SER B 14 0 SHEET 2 E 6 THR B 108 LYS B 113 1 O LYS B 113 N VAL B 13 SHEET 3 E 6 GLY B 90 GLN B 96 -1 N GLY B 90 O LEU B 110 SHEET 4 E 6 LEU B 39 LEU B 44 -1 N TYR B 42 O PHE B 93 SHEET 5 E 6 LYS B 51 TYR B 55 -1 O ILE B 54 N TRP B 41 SHEET 6 E 6 THR B 59 LEU B 60 -1 O THR B 59 N TYR B 55 SHEET 1 F 2 TYR B 30 TYR B 31 0 SHEET 2 F 2 LYS B 36 ASN B 37 -1 O LYS B 36 N TYR B 31 SHEET 1 G 4 THR B 120 PHE B 124 0 SHEET 2 G 4 LEU B 138 PHE B 145 -1 O VAL B 139 N PHE B 124 SHEET 3 G 4 TYR B 179 LEU B 185 -1 O LEU B 181 N VAL B 142 SHEET 4 G 4 VAL B 165 VAL B 169 -1 N LEU B 166 O THR B 184 SHEET 1 H 3 ASN B 151 LYS B 155 0 SHEET 2 H 3 LEU B 197 THR B 203 -1 O GLU B 201 N LYS B 153 SHEET 3 H 3 VAL B 212 ASN B 216 -1 O LEU B 215 N TYR B 198 SHEET 1 I 4 GLN C 3 SER C 7 0 SHEET 2 I 4 LEU C 18 THR C 25 -1 O THR C 21 N SER C 7 SHEET 3 I 4 GLN C 77 LEU C 82 -1 O LEU C 78 N CYS C 22 SHEET 4 I 4 VAL C 67 ARG C 71 -1 N THR C 70 O PHE C 79 SHEET 1 J 6 LEU C 11 VAL C 12 0 SHEET 2 J 6 THR C 112 VAL C 116 1 O THR C 115 N VAL C 12 SHEET 3 J 6 ALA C 91 ARG C 98 -1 N TYR C 93 O THR C 112 SHEET 4 J 6 HIS C 33 PHE C 40 -1 N ILE C 37 O TYR C 94 SHEET 5 J 6 LYS C 44 ILE C 51 -1 O GLU C 46 N ARG C 38 SHEET 6 J 6 THR C 57 TYR C 59 -1 O ASP C 58 N TYR C 50 SHEET 1 K 4 LEU C 11 VAL C 12 0 SHEET 2 K 4 THR C 112 VAL C 116 1 O THR C 115 N VAL C 12 SHEET 3 K 4 ALA C 91 ARG C 98 -1 N TYR C 93 O THR C 112 SHEET 4 K 4 PHE C 105 TRP C 108 -1 O TYR C 107 N ARG C 97 SHEET 1 L 4 SER C 125 VAL C 126 0 SHEET 2 L 4 CYS C 147 TYR C 152 -1 O LYS C 150 N SER C 125 SHEET 3 L 4 TYR C 182 VAL C 190 -1 O TYR C 182 N TYR C 152 SHEET 4 L 4 VAL C 170 THR C 172 -1 N HIS C 171 O SER C 187 SHEET 1 M 3 VAL C 143 THR C 144 0 SHEET 2 M 3 TYR C 182 VAL C 190 -1 O VAL C 190 N VAL C 143 SHEET 3 M 3 VAL C 176 LEU C 177 -1 N VAL C 176 O SER C 183 SHEET 1 N 2 THR C 201 ASN C 203 0 SHEET 2 N 2 ASP C 214 LYS C 216 -1 O LYS C 215 N CYS C 202 SSBOND 1 CYS B 23 CYS B 94 1555 1555 2.06 SSBOND 2 CYS B 140 CYS B 200 1555 1555 2.04 SSBOND 3 CYS C 22 CYS C 95 1555 1555 2.05 SSBOND 4 CYS C 147 CYS C 202 1555 1555 2.04 LINK SG CYS A 101 HG HG A 353 1555 1555 2.74 LINK NE2 HIS A 187 FE FE A 601 1555 1555 2.78 LINK SG CYS A 207 HG HG A 352 1555 1555 2.89 LINK NE2 HIS A 273 FE FE A 601 1555 1555 2.53 CISPEP 1 ASN B 100 PRO B 101 0 -2.21 CISPEP 2 TYR B 146 PRO B 147 0 0.14 CISPEP 3 PHE C 153 PRO C 154 0 0.57 CISPEP 4 GLU C 155 PRO C 156 0 -0.60 SITE 1 AC1 5 ASP A 50 GLN A 53 GLU A 58 ARG A 62 SITE 2 AC1 5 SER C 54 SITE 1 AC2 2 ASP A 279 THR A 280 SITE 1 AC3 6 MET A 1 SER A 5 LYS A 6 ILE A 9 SITE 2 AC3 6 GLU A 119 SER A 123 SITE 1 AC4 3 ARG A 95 ASN A 96 LYS A 115 SITE 1 AC5 2 GLU A 334 ARG B 114 SITE 1 AC6 5 ASN A 237 PRO A 241 SER C 31 ASN C 53 SITE 2 AC6 5 TYR C 100 SITE 1 AC7 1 ARG C 71 SITE 1 AC8 3 ASN A 96 GLN A 97 LYS A 142 SITE 1 AC9 3 SER A 109 LYS A 111 SER A 136 SITE 1 BC1 2 LEU A 147 ARG A 173 SITE 1 BC2 3 THR A 221 ARG A 222 GLN A 229 SITE 1 BC3 4 GLN B 48 SER B 49 LYS B 51 GLN C 110 SITE 1 BC4 4 GLN A 97 HIS A 140 LYS A 142 ARG A 143 SITE 1 BC5 4 ARG A 8 LYS A 113 LYS A 115 TYR A 116 SITE 1 BC6 4 GLY A 165 GLU A 166 LYS A 167 ARG A 168 SITE 1 BC7 3 PRO A 190 LEU A 191 LYS A 300 SITE 1 BC8 2 ARG A 215 GLU A 216 SITE 1 BC9 2 ARG A 310 ARG A 314 SITE 1 CC1 4 ARG A 305 PRO A 306 LYS A 307 LEU A 308 SITE 1 CC2 7 LYS B 18 THR B 20 SER B 71 GLY B 72 SITE 2 CC2 7 ASP B 76 THR B 78 THR B 80 SITE 1 CC3 10 LEU B 166 GLN B 167 SER B 168 SER B 182 SITE 2 CC3 10 THR B 184 PRO C 174 VAL C 176 SER C 183 SITE 3 CC3 10 LEU C 184 SER C 185 SITE 1 CC4 1 GLN C 81 SITE 1 CC5 3 TYR A 313 ASP A 328 ASP A 331 SITE 1 CC6 4 GLN B 43 LYS B 51 LEU B 53 PRO B 65 SITE 1 CC7 5 TRP A 174 THR A 184 ASN A 197 THR A 285 SITE 2 CC7 5 FE A 601 SITE 1 CC8 4 HIS A 187 ASP A 189 HIS A 273 AKG A 600 SITE 1 CC9 2 TRP A 206 CYS A 207 SITE 1 DC1 2 CYS A 101 MET A 112 CRYST1 138.381 138.381 183.622 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007226 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007226 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005446 0.00000