PDB Short entry for 3LLK HEADER OXIDOREDUCTASE 29-JAN-10 3LLK TITLE SULFHYDRYL OXIDASE FRAGMENT OF HUMAN QSOX1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFHYDRYL OXIDASE 1; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 286-546; COMPND 5 SYNONYM: HQSOX, QUIESCIN Q6; COMPND 6 EC: 1.8.3.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: QSCN6, QSOX1, UNQ2520/PRO6013; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS SULFHYDRYL OXIDASE, DISULFIDE, FLAVIN ADENINE DINUCLEOTIDE, KEYWDS 2 ALTERNATIVE SPLICING, FAD, FLAVOPROTEIN, GLYCOPROTEIN, GOLGI KEYWDS 3 APPARATUS, MEMBRANE, OXIDOREDUCTASE, POLYMORPHISM, SECRETED, KEYWDS 4 TRANSMEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR A.ALON,D.FASS REVDAT 3 06-SEP-23 3LLK 1 REMARK REVDAT 2 26-MAY-10 3LLK 1 JRNL REVDAT 1 31-MAR-10 3LLK 0 JRNL AUTH A.ALON,E.J.HECKLER,C.THORPE,D.FASS JRNL TITL QSOX CONTAINS A PSEUDO-DIMER OF FUNCTIONAL AND DEGENERATE JRNL TITL 2 SULFHYDRYL OXIDASE DOMAINS. JRNL REF FEBS LETT. V. 584 1521 2010 JRNL REFN ISSN 0014-5793 JRNL PMID 20211621 JRNL DOI 10.1016/J.FEBSLET.2010.03.001 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 55254 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3928 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5845 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 172 REMARK 3 SOLVENT ATOMS : 452 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : 2.184 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3LLK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057426. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.3-5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55492 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.55300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3LLI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% (W/V) PEG 8000, 0.1 M CITRIC ACID, REMARK 280 10-15% ETHANOL, PH 5.3-5.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.74050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 80.78650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.74050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 80.78650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.74050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 80.78650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.74050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 80.78650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 286 REMARK 465 ALA A 287 REMARK 465 PRO A 288 REMARK 465 THR A 289 REMARK 465 VAL A 290 REMARK 465 TRP A 291 REMARK 465 LYS A 292 REMARK 465 ASN A 422 REMARK 465 VAL A 423 REMARK 465 ASP A 424 REMARK 465 HIS A 425 REMARK 465 SER A 426 REMARK 465 GLN A 427 REMARK 465 GLU A 428 REMARK 465 ALA A 429 REMARK 465 ALA A 430 REMARK 465 ASP A 543 REMARK 465 PHE A 544 REMARK 465 PRO A 545 REMARK 465 ALA A 546 REMARK 465 ILE B 286 REMARK 465 ALA B 287 REMARK 465 PRO B 288 REMARK 465 THR B 289 REMARK 465 VAL B 290 REMARK 465 TRP B 291 REMARK 465 LYS B 292 REMARK 465 LEU B 293 REMARK 465 ALA B 294 REMARK 465 ASN B 422 REMARK 465 VAL B 423 REMARK 465 ASP B 424 REMARK 465 HIS B 425 REMARK 465 SER B 426 REMARK 465 ASP B 543 REMARK 465 PHE B 544 REMARK 465 PRO B 545 REMARK 465 ALA B 546 REMARK 465 ILE C 286 REMARK 465 ALA C 287 REMARK 465 PRO C 288 REMARK 465 THR C 289 REMARK 465 VAL C 290 REMARK 465 TRP C 291 REMARK 465 LYS C 292 REMARK 465 LEU C 293 REMARK 465 ASN C 422 REMARK 465 VAL C 423 REMARK 465 ASP C 424 REMARK 465 HIS C 425 REMARK 465 SER C 426 REMARK 465 GLN C 427 REMARK 465 GLU C 428 REMARK 465 ALA C 429 REMARK 465 ALA C 430 REMARK 465 PHE C 544 REMARK 465 PRO C 545 REMARK 465 ALA C 546 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 293 CG CD1 CD2 REMARK 470 LYS A 431 CG CD CE NZ REMARK 470 LYS A 433 CG CD CE NZ REMARK 470 GLN B 427 CG CD OE1 NE2 REMARK 470 LYS C 431 CG CD CE NZ REMARK 470 SER C 538 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1P FAD A 550 O HOH A 276 1.93 REMARK 500 O1P FAD B 550 O HOH B 591 1.94 REMARK 500 ND1 HIS B 455 O4 FAD B 550 2.12 REMARK 500 ND1 HIS A 455 O4 FAD A 550 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD2 LEU B 346 CD2 LEU B 346 4556 2.05 REMARK 500 NH2 ARG A 440 NH2 ARG A 440 3455 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 314 -67.74 -105.74 REMARK 500 ARG A 363 166.13 -49.27 REMARK 500 LEU A 384 -88.99 -100.21 REMARK 500 ILE A 391 -65.01 -123.73 REMARK 500 ARG A 401 -129.35 50.24 REMARK 500 ARG A 420 48.99 -92.39 REMARK 500 CYS A 449 95.84 -47.04 REMARK 500 SER A 463 -8.05 -158.83 REMARK 500 PRO A 520 158.53 -48.90 REMARK 500 ILE B 314 -64.53 -104.49 REMARK 500 LEU B 346 -70.11 -43.36 REMARK 500 ASN B 364 20.92 -77.34 REMARK 500 LEU B 384 -100.89 -128.90 REMARK 500 ILE B 391 -83.03 -126.45 REMARK 500 ARG B 401 -128.47 47.24 REMARK 500 ARG B 420 41.96 -93.40 REMARK 500 SER B 463 -1.21 -152.14 REMARK 500 PHE B 535 61.32 -100.03 REMARK 500 ILE C 314 -64.94 -102.96 REMARK 500 LEU C 384 -104.67 -109.08 REMARK 500 ILE C 391 -71.42 -128.87 REMARK 500 SER C 396 -8.86 -58.82 REMARK 500 ARG C 401 -124.00 49.60 REMARK 500 ARG C 420 -16.73 -140.95 REMARK 500 SER C 463 -0.22 -151.15 REMARK 500 PHE C 535 56.60 -93.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD C 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FLC A 547 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LLI RELATED DB: PDB REMARK 900 HUMAN QSOX SULFHYDRYL OXIDASE FRAGMENT REMARK 900 RELATED ID: 1JR8 RELATED DB: PDB REMARK 900 ERV FAMILY SULFHYDRYL OXIDASE REMARK 900 RELATED ID: 2HJ3 RELATED DB: PDB REMARK 900 ERV FAMILY SULFHYDRYL OXIDASE REMARK 900 RELATED ID: 3GWL RELATED DB: PDB REMARK 900 ERV FAMILY SULFHYDRYL OXIDASE REMARK 900 RELATED ID: 3GWN RELATED DB: PDB REMARK 900 ERV FAMILY SULFHYDRYL OXIDASE REMARK 900 RELATED ID: 1OQC RELATED DB: PDB REMARK 900 ERV FAMILY SULFHYDRYL OXIDASE REMARK 900 RELATED ID: 1JRA RELATED DB: PDB REMARK 900 ERV FAMILY SULFHYDRYL OXIDASE DBREF 3LLK A 286 546 UNP O00391 QSOX1_HUMAN 286 546 DBREF 3LLK B 286 546 UNP O00391 QSOX1_HUMAN 286 546 DBREF 3LLK C 286 546 UNP O00391 QSOX1_HUMAN 286 546 SEQRES 1 A 261 ILE ALA PRO THR VAL TRP LYS LEU ALA ASP ARG SER LYS SEQRES 2 A 261 ILE TYR MET ALA ASP LEU GLU SER ALA LEU HIS TYR ILE SEQRES 3 A 261 LEU ARG ILE GLU VAL GLY ARG PHE PRO VAL LEU GLU GLY SEQRES 4 A 261 GLN ARG LEU VAL ALA LEU LYS LYS PHE VAL ALA VAL LEU SEQRES 5 A 261 ALA LYS TYR PHE PRO GLY ARG PRO LEU VAL GLN ASN PHE SEQRES 6 A 261 LEU HIS SER VAL ASN GLU TRP LEU LYS ARG GLN LYS ARG SEQRES 7 A 261 ASN LYS ILE PRO TYR SER PHE PHE LYS THR ALA LEU ASP SEQRES 8 A 261 ASP ARG LYS GLU GLY ALA VAL LEU ALA LYS LYS VAL ASN SEQRES 9 A 261 TRP ILE GLY CYS GLN GLY SER GLU PRO HIS PHE ARG GLY SEQRES 10 A 261 PHE PRO CYS SER LEU TRP VAL LEU PHE HIS PHE LEU THR SEQRES 11 A 261 VAL GLN ALA ALA ARG GLN ASN VAL ASP HIS SER GLN GLU SEQRES 12 A 261 ALA ALA LYS ALA LYS GLU VAL LEU PRO ALA ILE ARG GLY SEQRES 13 A 261 TYR VAL HIS TYR PHE PHE GLY CYS ARG ASP CYS ALA SER SEQRES 14 A 261 HIS PHE GLU GLN MET ALA ALA ALA SER MET HIS ARG VAL SEQRES 15 A 261 GLY SER PRO ASN ALA ALA VAL LEU TRP LEU TRP SER SER SEQRES 16 A 261 HIS ASN ARG VAL ASN ALA ARG LEU ALA GLY ALA PRO SER SEQRES 17 A 261 GLU ASP PRO GLN PHE PRO LYS VAL GLN TRP PRO PRO ARG SEQRES 18 A 261 GLU LEU CYS SER ALA CYS HIS ASN GLU ARG LEU ASP VAL SEQRES 19 A 261 PRO VAL TRP ASP VAL GLU ALA THR LEU ASN PHE LEU LYS SEQRES 20 A 261 ALA HIS PHE SER PRO SER ASN ILE ILE LEU ASP PHE PRO SEQRES 21 A 261 ALA SEQRES 1 B 261 ILE ALA PRO THR VAL TRP LYS LEU ALA ASP ARG SER LYS SEQRES 2 B 261 ILE TYR MET ALA ASP LEU GLU SER ALA LEU HIS TYR ILE SEQRES 3 B 261 LEU ARG ILE GLU VAL GLY ARG PHE PRO VAL LEU GLU GLY SEQRES 4 B 261 GLN ARG LEU VAL ALA LEU LYS LYS PHE VAL ALA VAL LEU SEQRES 5 B 261 ALA LYS TYR PHE PRO GLY ARG PRO LEU VAL GLN ASN PHE SEQRES 6 B 261 LEU HIS SER VAL ASN GLU TRP LEU LYS ARG GLN LYS ARG SEQRES 7 B 261 ASN LYS ILE PRO TYR SER PHE PHE LYS THR ALA LEU ASP SEQRES 8 B 261 ASP ARG LYS GLU GLY ALA VAL LEU ALA LYS LYS VAL ASN SEQRES 9 B 261 TRP ILE GLY CYS GLN GLY SER GLU PRO HIS PHE ARG GLY SEQRES 10 B 261 PHE PRO CYS SER LEU TRP VAL LEU PHE HIS PHE LEU THR SEQRES 11 B 261 VAL GLN ALA ALA ARG GLN ASN VAL ASP HIS SER GLN GLU SEQRES 12 B 261 ALA ALA LYS ALA LYS GLU VAL LEU PRO ALA ILE ARG GLY SEQRES 13 B 261 TYR VAL HIS TYR PHE PHE GLY CYS ARG ASP CYS ALA SER SEQRES 14 B 261 HIS PHE GLU GLN MET ALA ALA ALA SER MET HIS ARG VAL SEQRES 15 B 261 GLY SER PRO ASN ALA ALA VAL LEU TRP LEU TRP SER SER SEQRES 16 B 261 HIS ASN ARG VAL ASN ALA ARG LEU ALA GLY ALA PRO SER SEQRES 17 B 261 GLU ASP PRO GLN PHE PRO LYS VAL GLN TRP PRO PRO ARG SEQRES 18 B 261 GLU LEU CYS SER ALA CYS HIS ASN GLU ARG LEU ASP VAL SEQRES 19 B 261 PRO VAL TRP ASP VAL GLU ALA THR LEU ASN PHE LEU LYS SEQRES 20 B 261 ALA HIS PHE SER PRO SER ASN ILE ILE LEU ASP PHE PRO SEQRES 21 B 261 ALA SEQRES 1 C 261 ILE ALA PRO THR VAL TRP LYS LEU ALA ASP ARG SER LYS SEQRES 2 C 261 ILE TYR MET ALA ASP LEU GLU SER ALA LEU HIS TYR ILE SEQRES 3 C 261 LEU ARG ILE GLU VAL GLY ARG PHE PRO VAL LEU GLU GLY SEQRES 4 C 261 GLN ARG LEU VAL ALA LEU LYS LYS PHE VAL ALA VAL LEU SEQRES 5 C 261 ALA LYS TYR PHE PRO GLY ARG PRO LEU VAL GLN ASN PHE SEQRES 6 C 261 LEU HIS SER VAL ASN GLU TRP LEU LYS ARG GLN LYS ARG SEQRES 7 C 261 ASN LYS ILE PRO TYR SER PHE PHE LYS THR ALA LEU ASP SEQRES 8 C 261 ASP ARG LYS GLU GLY ALA VAL LEU ALA LYS LYS VAL ASN SEQRES 9 C 261 TRP ILE GLY CYS GLN GLY SER GLU PRO HIS PHE ARG GLY SEQRES 10 C 261 PHE PRO CYS SER LEU TRP VAL LEU PHE HIS PHE LEU THR SEQRES 11 C 261 VAL GLN ALA ALA ARG GLN ASN VAL ASP HIS SER GLN GLU SEQRES 12 C 261 ALA ALA LYS ALA LYS GLU VAL LEU PRO ALA ILE ARG GLY SEQRES 13 C 261 TYR VAL HIS TYR PHE PHE GLY CYS ARG ASP CYS ALA SER SEQRES 14 C 261 HIS PHE GLU GLN MET ALA ALA ALA SER MET HIS ARG VAL SEQRES 15 C 261 GLY SER PRO ASN ALA ALA VAL LEU TRP LEU TRP SER SER SEQRES 16 C 261 HIS ASN ARG VAL ASN ALA ARG LEU ALA GLY ALA PRO SER SEQRES 17 C 261 GLU ASP PRO GLN PHE PRO LYS VAL GLN TRP PRO PRO ARG SEQRES 18 C 261 GLU LEU CYS SER ALA CYS HIS ASN GLU ARG LEU ASP VAL SEQRES 19 C 261 PRO VAL TRP ASP VAL GLU ALA THR LEU ASN PHE LEU LYS SEQRES 20 C 261 ALA HIS PHE SER PRO SER ASN ILE ILE LEU ASP PHE PRO SEQRES 21 C 261 ALA HET FAD A 550 53 HET FLC A 547 13 HET FAD B 550 53 HET FAD C 550 53 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM FLC CITRATE ANION FORMUL 4 FAD 3(C27 H33 N9 O15 P2) FORMUL 5 FLC C6 H5 O7 3- FORMUL 8 HOH *452(H2 O) HELIX 1 1 MET A 301 ILE A 314 1 14 HELIX 2 2 GLU A 315 PHE A 319 5 5 HELIX 3 3 GLY A 324 PHE A 341 1 18 HELIX 4 4 ARG A 344 GLN A 361 1 18 HELIX 5 5 TYR A 368 ARG A 378 1 11 HELIX 6 6 LYS A 379 LEU A 384 1 6 HELIX 7 7 GLY A 402 ARG A 420 1 19 HELIX 8 8 LYS A 431 LYS A 433 5 3 HELIX 9 9 GLU A 434 PHE A 447 1 14 HELIX 10 10 CYS A 449 MET A 464 1 16 HELIX 11 11 HIS A 465 VAL A 467 5 3 HELIX 12 12 SER A 469 ALA A 489 1 21 HELIX 13 13 ASP A 523 PHE A 535 1 13 HELIX 14 14 SER A 536 SER A 538 5 3 HELIX 15 15 MET B 301 ILE B 314 1 14 HELIX 16 16 GLU B 315 PHE B 319 5 5 HELIX 17 17 GLY B 324 PHE B 341 1 18 HELIX 18 18 ARG B 344 GLN B 361 1 18 HELIX 19 19 TYR B 368 ARG B 378 1 11 HELIX 20 20 LYS B 379 LEU B 384 1 6 HELIX 21 21 GLY B 402 ARG B 420 1 19 HELIX 22 22 GLN B 427 LYS B 433 1 7 HELIX 23 23 GLU B 434 PHE B 447 1 14 HELIX 24 24 CYS B 449 MET B 464 1 16 HELIX 25 25 HIS B 465 VAL B 467 5 3 HELIX 26 26 SER B 469 ALA B 489 1 21 HELIX 27 27 ASP B 523 PHE B 535 1 13 HELIX 28 28 SER B 536 SER B 538 5 3 HELIX 29 29 MET C 301 ILE C 314 1 14 HELIX 30 30 GLU C 315 PHE C 319 5 5 HELIX 31 31 GLU C 323 PHE C 341 1 19 HELIX 32 32 ARG C 344 GLN C 361 1 18 HELIX 33 33 TYR C 368 ARG C 378 1 11 HELIX 34 34 LYS C 379 LEU C 384 1 6 HELIX 35 35 GLY C 402 ALA C 419 1 18 HELIX 36 36 LYS C 431 LYS C 433 5 3 HELIX 37 37 GLU C 434 PHE C 446 1 13 HELIX 38 38 CYS C 449 MET C 464 1 16 HELIX 39 39 HIS C 465 VAL C 467 5 3 HELIX 40 40 SER C 469 ALA C 489 1 21 HELIX 41 41 ASP C 523 PHE C 535 1 13 HELIX 42 42 SER C 536 SER C 538 5 3 SHEET 1 A 2 ILE A 299 TYR A 300 0 SHEET 2 A 2 ILE A 540 ILE A 541 1 O ILE A 541 N ILE A 299 SHEET 1 B 2 VAL A 321 GLU A 323 0 SHEET 2 B 2 LYS A 365 PRO A 367 -1 O ILE A 366 N LEU A 322 SHEET 1 C 2 ILE B 299 TYR B 300 0 SHEET 2 C 2 ILE B 540 ILE B 541 1 O ILE B 541 N ILE B 299 SHEET 1 D 2 VAL B 321 GLU B 323 0 SHEET 2 D 2 LYS B 365 PRO B 367 -1 O ILE B 366 N LEU B 322 SHEET 1 E 2 ILE C 299 TYR C 300 0 SHEET 2 E 2 ILE C 540 ILE C 541 1 O ILE C 541 N ILE C 299 SHEET 1 F 2 VAL C 321 LEU C 322 0 SHEET 2 F 2 ILE C 366 PRO C 367 -1 O ILE C 366 N LEU C 322 SSBOND 1 CYS A 393 CYS A 405 1555 1555 2.03 SSBOND 2 CYS A 449 CYS A 452 1555 1555 2.04 SSBOND 3 CYS A 509 CYS A 512 1555 1555 2.03 SSBOND 4 CYS B 393 CYS B 405 1555 1555 2.03 SSBOND 5 CYS B 449 CYS B 452 1555 1555 2.03 SSBOND 6 CYS B 509 CYS B 512 1555 1555 2.04 SSBOND 7 CYS C 393 CYS C 405 1555 1555 2.03 SSBOND 8 CYS C 449 CYS C 452 1555 1555 2.03 SSBOND 9 CYS C 509 CYS C 512 1555 1555 2.04 CISPEP 1 TRP A 503 PRO A 504 0 0.29 CISPEP 2 TRP B 503 PRO B 504 0 0.08 CISPEP 3 TRP C 503 PRO C 504 0 0.02 SITE 1 AC1 24 HOH A 3 HOH A 26 HOH A 271 HOH A 273 SITE 2 AC1 24 HOH A 276 HOH A 283 ARG A 401 PRO A 404 SITE 3 AC1 24 CYS A 405 TRP A 408 HIS A 412 PHE A 447 SITE 4 AC1 24 ASP A 451 CYS A 452 HIS A 455 PHE A 456 SITE 5 AC1 24 TRP A 478 HIS A 481 ASN A 482 ASN A 485 SITE 6 AC1 24 LEU A 488 LYS A 500 TRP A 503 PHE A 535 SITE 1 AC2 27 HOH B 38 HOH B 39 HOH B 157 HOH B 190 SITE 2 AC2 27 HOH B 194 HOH B 195 ARG B 401 PRO B 404 SITE 3 AC2 27 CYS B 405 TRP B 408 HIS B 412 ASP B 451 SITE 4 AC2 27 CYS B 452 HIS B 455 PHE B 456 TRP B 478 SITE 5 AC2 27 HIS B 481 ASN B 482 VAL B 484 ASN B 485 SITE 6 AC2 27 LEU B 488 LYS B 500 TRP B 503 PHE B 535 SITE 7 AC2 27 HOH B 548 HOH B 549 HOH B 591 SITE 1 AC3 25 HOH C 90 HOH C 176 HOH C 177 ARG C 401 SITE 2 AC3 25 PRO C 404 CYS C 405 TRP C 408 HIS C 412 SITE 3 AC3 25 PHE C 447 ASP C 451 CYS C 452 HIS C 455 SITE 4 AC3 25 PHE C 456 TRP C 478 HIS C 481 ASN C 482 SITE 5 AC3 25 VAL C 484 ASN C 485 LEU C 488 LYS C 500 SITE 6 AC3 25 TRP C 503 PHE C 535 HOH C 574 HOH C 575 SITE 7 AC3 25 HOH C 586 SITE 1 AC4 8 HOH A 151 ARG A 483 ARG A 487 HOH A 606 SITE 2 AC4 8 HOH A 613 HOH A 615 PRO B 520 VAL B 521 CRYST1 83.481 161.573 121.940 90.00 90.00 90.00 C 2 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011979 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006189 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008201 0.00000