PDB Short entry for 3LMG HEADER TRANSFERASE 30-JAN-10 3LMG TITLE CRYSTAL STRUCTURE OF THE ERBB3 KINASE DOMAIN IN COMPLEX WITH AMP-PNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: TYROSINE KINASE DOMAIN (UNP RESIDUES 684-1020); COMPND 5 SYNONYM: C-ERBB3, TYROSINE KINASE-TYPE CELL SURFACE RECEPTOR HER3; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERBB3, HER3; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PFASTBAC1 KEYWDS ERBB3, HER3, TYROSINE KINASE DOMAIN, AMP-PNP, NUCLEOTIDE BINDING, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.SHI,M.A.LEMMON REVDAT 5 06-SEP-23 3LMG 1 REMARK SEQADV LINK REVDAT 4 01-NOV-17 3LMG 1 REMARK REVDAT 3 13-JUL-11 3LMG 1 VERSN REVDAT 2 30-JUN-10 3LMG 1 JRNL REVDAT 1 21-APR-10 3LMG 0 JRNL AUTH F.SHI,S.E.TELESCO,Y.LIU,R.RADHAKRISHNAN,M.A.LEMMON JRNL TITL ERBB3/HER3 INTRACELLULAR DOMAIN IS COMPETENT TO BIND ATP AND JRNL TITL 2 CATALYZE AUTOPHOSPHORYLATION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 7692 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 20351256 JRNL DOI 10.1073/PNAS.1002753107 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.1 REMARK 3 NUMBER OF REFLECTIONS : 16018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1612 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 589 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 50.16 REMARK 3 BIN R VALUE (WORKING SET) : 0.3330 REMARK 3 BIN FREE R VALUE SET COUNT : 57 REMARK 3 BIN FREE R VALUE : 0.4290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4217 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 7 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.97000 REMARK 3 B22 (A**2) : -1.87000 REMARK 3 B33 (A**2) : 1.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.19000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.469 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.371 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 38.690 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.912 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4382 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5960 ; 1.099 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 529 ; 4.684 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 177 ;34.083 ;23.559 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 744 ;15.009 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;11.599 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 674 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3211 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2663 ; 0.206 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4299 ; 0.384 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1719 ; 0.307 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1661 ; 0.572 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 680 A 774 REMARK 3 ORIGIN FOR THE GROUP (A): 23.4330 -35.5810 45.4250 REMARK 3 T TENSOR REMARK 3 T11: 0.0829 T22: 0.3513 REMARK 3 T33: 0.2317 T12: 0.0636 REMARK 3 T13: -0.0778 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 3.4193 L22: 3.7402 REMARK 3 L33: 7.4621 L12: 0.4637 REMARK 3 L13: -0.0178 L23: -2.8374 REMARK 3 S TENSOR REMARK 3 S11: 0.0288 S12: 0.0471 S13: -0.1558 REMARK 3 S21: -0.2125 S22: 0.0900 S23: -0.2182 REMARK 3 S31: 0.6191 S32: 0.1476 S33: -0.1189 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 775 A 959 REMARK 3 ORIGIN FOR THE GROUP (A): 7.0330 -30.6840 64.0460 REMARK 3 T TENSOR REMARK 3 T11: 0.2793 T22: 0.6803 REMARK 3 T33: 0.2926 T12: 0.1597 REMARK 3 T13: 0.1124 T23: 0.0882 REMARK 3 L TENSOR REMARK 3 L11: 6.0648 L22: 2.4923 REMARK 3 L33: 3.8879 L12: -1.0828 REMARK 3 L13: -0.1934 L23: 0.2777 REMARK 3 S TENSOR REMARK 3 S11: -0.1148 S12: -0.7709 S13: 0.0261 REMARK 3 S21: 0.5745 S22: 0.1111 S23: 0.5227 REMARK 3 S31: -0.1631 S32: -0.6445 S33: 0.0038 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 680 B 774 REMARK 3 ORIGIN FOR THE GROUP (A): 23.3460 -14.6490 32.4840 REMARK 3 T TENSOR REMARK 3 T11: 0.1003 T22: 0.3819 REMARK 3 T33: 0.2519 T12: -0.0620 REMARK 3 T13: -0.1264 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 4.0734 L22: 2.8083 REMARK 3 L33: 7.0335 L12: -0.2972 REMARK 3 L13: 0.2445 L23: -1.8684 REMARK 3 S TENSOR REMARK 3 S11: -0.0860 S12: -0.3418 S13: 0.0949 REMARK 3 S21: 0.2422 S22: 0.0665 S23: -0.1892 REMARK 3 S31: -0.4729 S32: 0.4187 S33: 0.0195 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 775 B 959 REMARK 3 ORIGIN FOR THE GROUP (A): 7.2140 -19.8260 14.2760 REMARK 3 T TENSOR REMARK 3 T11: 0.1122 T22: 0.4108 REMARK 3 T33: 0.2240 T12: -0.0377 REMARK 3 T13: -0.1399 T23: -0.0352 REMARK 3 L TENSOR REMARK 3 L11: 5.0163 L22: 3.9379 REMARK 3 L33: 5.9185 L12: 0.0552 REMARK 3 L13: 0.6856 L23: 0.8108 REMARK 3 S TENSOR REMARK 3 S11: 0.1451 S12: 0.3359 S13: -0.3230 REMARK 3 S21: -0.3230 S22: -0.2465 S23: 0.3940 REMARK 3 S31: 0.2448 S32: -0.4727 S33: 0.1015 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3LMG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057458. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16021 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : 0.11400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 55.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.49900 REMARK 200 R SYM FOR SHELL (I) : 0.49900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, DM REMARK 200 STARTING MODEL: PDB ENTRY 2GS7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MOPS PH7.4, 27% (W/V) PEG8000, REMARK 280 0.17 M AMMONIUM SULFATE AND 15%(V/V) GLYCEROL IN WELL SOLUTION REMARK 280 AND 5MM MGCL2 AND 1MM AMP-PNP IN PROTEIN SOLUTION, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 96.67400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.99050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 96.67400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.99050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 658 REMARK 465 HIS A 659 REMARK 465 HIS A 660 REMARK 465 HIS A 661 REMARK 465 HIS A 662 REMARK 465 HIS A 663 REMARK 465 HIS A 664 REMARK 465 GLY A 665 REMARK 465 GLU A 666 REMARK 465 SER A 667 REMARK 465 ILE A 668 REMARK 465 GLU A 669 REMARK 465 PRO A 670 REMARK 465 LEU A 671 REMARK 465 ASP A 672 REMARK 465 PRO A 673 REMARK 465 SER A 674 REMARK 465 GLU A 675 REMARK 465 LYS A 676 REMARK 465 ALA A 677 REMARK 465 ASN A 678 REMARK 465 LYS A 679 REMARK 465 SER A 729 REMARK 465 GLY A 730 REMARK 465 ARG A 731 REMARK 465 LYS A 845 REMARK 465 GLN A 846 REMARK 465 LEU A 847 REMARK 465 LEU A 848 REMARK 465 TYR A 849 REMARK 465 SER A 850 REMARK 465 GLU A 851 REMARK 465 ALA A 852 REMARK 465 LYS A 853 REMARK 465 LYS A 960 REMARK 465 ARG A 961 REMARK 465 GLU A 962 REMARK 465 SER A 963 REMARK 465 GLY A 964 REMARK 465 PRO A 965 REMARK 465 GLY A 966 REMARK 465 ILE A 967 REMARK 465 ALA A 968 REMARK 465 PRO A 969 REMARK 465 GLY A 970 REMARK 465 PRO A 971 REMARK 465 GLU A 972 REMARK 465 PRO A 973 REMARK 465 HIS A 974 REMARK 465 GLY A 975 REMARK 465 LEU A 976 REMARK 465 THR A 977 REMARK 465 ASN A 978 REMARK 465 LYS A 979 REMARK 465 LYS A 980 REMARK 465 LEU A 981 REMARK 465 GLU A 982 REMARK 465 GLU A 983 REMARK 465 VAL A 984 REMARK 465 GLU A 985 REMARK 465 LEU A 986 REMARK 465 GLU A 987 REMARK 465 PRO A 988 REMARK 465 GLU A 989 REMARK 465 LEU A 990 REMARK 465 ASP A 991 REMARK 465 LEU A 992 REMARK 465 ASP A 993 REMARK 465 LEU A 994 REMARK 465 ASP A 995 REMARK 465 LEU A 996 REMARK 465 GLU A 997 REMARK 465 ALA A 998 REMARK 465 GLU A 999 REMARK 465 GLU A 1000 REMARK 465 ASP A 1001 REMARK 465 MET B 658 REMARK 465 HIS B 659 REMARK 465 HIS B 660 REMARK 465 HIS B 661 REMARK 465 HIS B 662 REMARK 465 HIS B 663 REMARK 465 HIS B 664 REMARK 465 GLY B 665 REMARK 465 GLU B 666 REMARK 465 SER B 667 REMARK 465 ILE B 668 REMARK 465 GLU B 669 REMARK 465 PRO B 670 REMARK 465 LEU B 671 REMARK 465 ASP B 672 REMARK 465 PRO B 673 REMARK 465 SER B 674 REMARK 465 GLU B 675 REMARK 465 LYS B 676 REMARK 465 ALA B 677 REMARK 465 ASN B 678 REMARK 465 LYS B 679 REMARK 465 GLU B 712 REMARK 465 GLY B 730 REMARK 465 ARG B 731 REMARK 465 GLN B 846 REMARK 465 LEU B 847 REMARK 465 LEU B 848 REMARK 465 TYR B 849 REMARK 465 SER B 850 REMARK 465 GLU B 851 REMARK 465 ALA B 852 REMARK 465 LYS B 853 REMARK 465 THR B 854 REMARK 465 LYS B 960 REMARK 465 ARG B 961 REMARK 465 GLU B 962 REMARK 465 SER B 963 REMARK 465 GLY B 964 REMARK 465 PRO B 965 REMARK 465 GLY B 966 REMARK 465 ILE B 967 REMARK 465 ALA B 968 REMARK 465 PRO B 969 REMARK 465 GLY B 970 REMARK 465 PRO B 971 REMARK 465 GLU B 972 REMARK 465 PRO B 973 REMARK 465 HIS B 974 REMARK 465 GLY B 975 REMARK 465 LEU B 976 REMARK 465 THR B 977 REMARK 465 ASN B 978 REMARK 465 LYS B 979 REMARK 465 LYS B 980 REMARK 465 LEU B 981 REMARK 465 GLU B 982 REMARK 465 GLU B 983 REMARK 465 VAL B 984 REMARK 465 GLU B 985 REMARK 465 LEU B 986 REMARK 465 GLU B 987 REMARK 465 PRO B 988 REMARK 465 GLU B 989 REMARK 465 LEU B 990 REMARK 465 ASP B 991 REMARK 465 LEU B 992 REMARK 465 ASP B 993 REMARK 465 LEU B 994 REMARK 465 ASP B 995 REMARK 465 LEU B 996 REMARK 465 GLU B 997 REMARK 465 ALA B 998 REMARK 465 GLU B 999 REMARK 465 GLU B 1000 REMARK 465 ASP B 1001 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 712 CG CD OE1 OE2 REMARK 470 GLU A 714 CG CD OE1 OE2 REMARK 470 GLN A 782 CG CD OE1 NE2 REMARK 470 LEU A 904 CG CD1 CD2 REMARK 470 LYS B 694 CD CE NZ REMARK 470 LYS B 940 CG CD CE NZ REMARK 470 ARG B 951 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 736 129.39 92.16 REMARK 500 ARG A 784 -128.81 58.40 REMARK 500 ASN A 815 37.57 -153.15 REMARK 500 PRO A 842 107.47 -51.29 REMARK 500 PRO A 855 -17.97 -45.34 REMARK 500 ARG A 910 -176.37 59.15 REMARK 500 ALA B 736 135.23 87.34 REMARK 500 ASP B 748 117.23 -165.36 REMARK 500 ARG B 784 -134.86 64.34 REMARK 500 ARG B 814 -13.10 74.69 REMARK 500 ASN B 815 43.30 -147.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP A 301 O2B REMARK 620 2 ANP A 301 O2A 85.8 REMARK 620 3 ANP A 301 O1G 92.1 93.0 REMARK 620 4 ASN A 820 OD1 104.0 159.3 68.8 REMARK 620 5 ASP A 833 OD2 169.2 83.7 90.6 86.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP B 301 O2B REMARK 620 2 ANP B 301 O2A 86.0 REMARK 620 3 ANP B 301 O1G 70.0 80.7 REMARK 620 4 ASN B 820 OD1 102.4 142.9 69.0 REMARK 620 5 ASP B 833 OD2 150.3 82.3 81.2 72.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP B 301 DBREF 3LMG A 665 1001 UNP P21860 ERBB3_HUMAN 684 1020 DBREF 3LMG B 665 1001 UNP P21860 ERBB3_HUMAN 684 1020 SEQADV 3LMG MET A 658 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS A 659 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS A 660 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS A 661 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS A 662 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS A 663 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS A 664 UNP P21860 EXPRESSION TAG SEQADV 3LMG MET B 658 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS B 659 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS B 660 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS B 661 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS B 662 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS B 663 UNP P21860 EXPRESSION TAG SEQADV 3LMG HIS B 664 UNP P21860 EXPRESSION TAG SEQRES 1 A 344 MET HIS HIS HIS HIS HIS HIS GLY GLU SER ILE GLU PRO SEQRES 2 A 344 LEU ASP PRO SER GLU LYS ALA ASN LYS VAL LEU ALA ARG SEQRES 3 A 344 ILE PHE LYS GLU THR GLU LEU ARG LYS LEU LYS VAL LEU SEQRES 4 A 344 GLY SER GLY VAL PHE GLY THR VAL HIS LYS GLY VAL TRP SEQRES 5 A 344 ILE PRO GLU GLY GLU SER ILE LYS ILE PRO VAL CYS ILE SEQRES 6 A 344 LYS VAL ILE GLU ASP LYS SER GLY ARG GLN SER PHE GLN SEQRES 7 A 344 ALA VAL THR ASP HIS MET LEU ALA ILE GLY SER LEU ASP SEQRES 8 A 344 HIS ALA HIS ILE VAL ARG LEU LEU GLY LEU CYS PRO GLY SEQRES 9 A 344 SER SER LEU GLN LEU VAL THR GLN TYR LEU PRO LEU GLY SEQRES 10 A 344 SER LEU LEU ASP HIS VAL ARG GLN HIS ARG GLY ALA LEU SEQRES 11 A 344 GLY PRO GLN LEU LEU LEU ASN TRP GLY VAL GLN ILE ALA SEQRES 12 A 344 LYS GLY MET TYR TYR LEU GLU GLU HIS GLY MET VAL HIS SEQRES 13 A 344 ARG ASN LEU ALA ALA ARG ASN VAL LEU LEU LYS SER PRO SEQRES 14 A 344 SER GLN VAL GLN VAL ALA ASP PHE GLY VAL ALA ASP LEU SEQRES 15 A 344 LEU PRO PRO ASP ASP LYS GLN LEU LEU TYR SER GLU ALA SEQRES 16 A 344 LYS THR PRO ILE LYS TRP MET ALA LEU GLU SER ILE HIS SEQRES 17 A 344 PHE GLY LYS TYR THR HIS GLN SER ASP VAL TRP SER TYR SEQRES 18 A 344 GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY ALA GLU SEQRES 19 A 344 PRO TYR ALA GLY LEU ARG LEU ALA GLU VAL PRO ASP LEU SEQRES 20 A 344 LEU GLU LYS GLY GLU ARG LEU ALA GLN PRO GLN ILE CYS SEQRES 21 A 344 THR ILE ASP VAL TYR MET VAL MET VAL LYS CYS TRP MET SEQRES 22 A 344 ILE ASP GLU ASN ILE ARG PRO THR PHE LYS GLU LEU ALA SEQRES 23 A 344 ASN GLU PHE THR ARG MET ALA ARG ASP PRO PRO ARG TYR SEQRES 24 A 344 LEU VAL ILE LYS ARG GLU SER GLY PRO GLY ILE ALA PRO SEQRES 25 A 344 GLY PRO GLU PRO HIS GLY LEU THR ASN LYS LYS LEU GLU SEQRES 26 A 344 GLU VAL GLU LEU GLU PRO GLU LEU ASP LEU ASP LEU ASP SEQRES 27 A 344 LEU GLU ALA GLU GLU ASP SEQRES 1 B 344 MET HIS HIS HIS HIS HIS HIS GLY GLU SER ILE GLU PRO SEQRES 2 B 344 LEU ASP PRO SER GLU LYS ALA ASN LYS VAL LEU ALA ARG SEQRES 3 B 344 ILE PHE LYS GLU THR GLU LEU ARG LYS LEU LYS VAL LEU SEQRES 4 B 344 GLY SER GLY VAL PHE GLY THR VAL HIS LYS GLY VAL TRP SEQRES 5 B 344 ILE PRO GLU GLY GLU SER ILE LYS ILE PRO VAL CYS ILE SEQRES 6 B 344 LYS VAL ILE GLU ASP LYS SER GLY ARG GLN SER PHE GLN SEQRES 7 B 344 ALA VAL THR ASP HIS MET LEU ALA ILE GLY SER LEU ASP SEQRES 8 B 344 HIS ALA HIS ILE VAL ARG LEU LEU GLY LEU CYS PRO GLY SEQRES 9 B 344 SER SER LEU GLN LEU VAL THR GLN TYR LEU PRO LEU GLY SEQRES 10 B 344 SER LEU LEU ASP HIS VAL ARG GLN HIS ARG GLY ALA LEU SEQRES 11 B 344 GLY PRO GLN LEU LEU LEU ASN TRP GLY VAL GLN ILE ALA SEQRES 12 B 344 LYS GLY MET TYR TYR LEU GLU GLU HIS GLY MET VAL HIS SEQRES 13 B 344 ARG ASN LEU ALA ALA ARG ASN VAL LEU LEU LYS SER PRO SEQRES 14 B 344 SER GLN VAL GLN VAL ALA ASP PHE GLY VAL ALA ASP LEU SEQRES 15 B 344 LEU PRO PRO ASP ASP LYS GLN LEU LEU TYR SER GLU ALA SEQRES 16 B 344 LYS THR PRO ILE LYS TRP MET ALA LEU GLU SER ILE HIS SEQRES 17 B 344 PHE GLY LYS TYR THR HIS GLN SER ASP VAL TRP SER TYR SEQRES 18 B 344 GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY ALA GLU SEQRES 19 B 344 PRO TYR ALA GLY LEU ARG LEU ALA GLU VAL PRO ASP LEU SEQRES 20 B 344 LEU GLU LYS GLY GLU ARG LEU ALA GLN PRO GLN ILE CYS SEQRES 21 B 344 THR ILE ASP VAL TYR MET VAL MET VAL LYS CYS TRP MET SEQRES 22 B 344 ILE ASP GLU ASN ILE ARG PRO THR PHE LYS GLU LEU ALA SEQRES 23 B 344 ASN GLU PHE THR ARG MET ALA ARG ASP PRO PRO ARG TYR SEQRES 24 B 344 LEU VAL ILE LYS ARG GLU SER GLY PRO GLY ILE ALA PRO SEQRES 25 B 344 GLY PRO GLU PRO HIS GLY LEU THR ASN LYS LYS LEU GLU SEQRES 26 B 344 GLU VAL GLU LEU GLU PRO GLU LEU ASP LEU ASP LEU ASP SEQRES 27 B 344 LEU GLU ALA GLU GLU ASP HET MG A 202 1 HET ANP A 301 31 HET MG B 202 1 HET ANP B 301 31 HETNAM MG MAGNESIUM ION HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER FORMUL 3 MG 2(MG 2+) FORMUL 4 ANP 2(C10 H17 N6 O12 P3) FORMUL 7 HOH *7(H2 O) HELIX 1 1 LYS A 686 THR A 688 5 3 HELIX 2 2 THR A 738 LEU A 747 1 10 HELIX 3 3 SER A 775 ARG A 784 1 10 HELIX 4 4 GLY A 785 LEU A 787 5 3 HELIX 5 5 GLY A 788 HIS A 809 1 22 HELIX 6 6 VAL A 836 LEU A 840 5 5 HELIX 7 7 THR A 854 MET A 859 5 6 HELIX 8 8 ALA A 860 GLY A 867 1 8 HELIX 9 9 THR A 870 THR A 887 1 18 HELIX 10 10 GLU A 900 LYS A 907 1 8 HELIX 11 11 THR A 918 TRP A 929 1 12 HELIX 12 12 ASP A 932 ARG A 936 5 5 HELIX 13 13 THR A 938 ARG A 951 1 14 HELIX 14 14 ASP A 952 LEU A 957 1 6 HELIX 15 15 LYS B 686 THR B 688 5 3 HELIX 16 16 THR B 738 GLY B 745 1 8 HELIX 17 17 SER B 775 ARG B 784 1 10 HELIX 18 18 GLY B 785 LEU B 787 5 3 HELIX 19 19 GLY B 788 HIS B 809 1 22 HELIX 20 20 ALA B 817 ARG B 819 5 3 HELIX 21 21 GLY B 835 LEU B 840 5 6 HELIX 22 22 PRO B 855 MET B 859 5 5 HELIX 23 23 ALA B 860 GLY B 867 1 8 HELIX 24 24 THR B 870 THR B 887 1 18 HELIX 25 25 ALA B 899 LYS B 907 1 9 HELIX 26 26 THR B 918 TRP B 929 1 12 HELIX 27 27 THR B 938 ARG B 951 1 14 HELIX 28 28 ASP B 952 LEU B 957 1 6 SHEET 1 A 5 LEU A 690 SER A 698 0 SHEET 2 A 5 GLY A 702 TRP A 709 -1 O VAL A 708 N ARG A 691 SHEET 3 A 5 ILE A 718 ILE A 725 -1 O ILE A 722 N HIS A 705 SHEET 4 A 5 LEU A 764 GLN A 769 -1 O THR A 768 N CYS A 721 SHEET 5 A 5 LEU A 755 CYS A 759 -1 N GLY A 757 O VAL A 767 SHEET 1 B 2 VAL A 821 SER A 825 0 SHEET 2 B 2 GLN A 828 VAL A 831 -1 O GLN A 830 N LEU A 822 SHEET 1 C 5 LEU B 690 SER B 698 0 SHEET 2 C 5 GLY B 702 TRP B 709 -1 O LYS B 706 N LYS B 694 SHEET 3 C 5 ILE B 718 ILE B 725 -1 O VAL B 724 N THR B 703 SHEET 4 C 5 LEU B 764 GLN B 769 -1 O THR B 768 N CYS B 721 SHEET 5 C 5 LEU B 755 CYS B 759 -1 N CYS B 759 O GLN B 765 SHEET 1 D 2 VAL B 821 LEU B 823 0 SHEET 2 D 2 VAL B 829 VAL B 831 -1 O GLN B 830 N LEU B 822 LINK MG MG A 202 O2B ANP A 301 1555 1555 1.85 LINK MG MG A 202 O2A ANP A 301 1555 1555 2.01 LINK MG MG A 202 O1G ANP A 301 1555 1555 2.08 LINK MG MG A 202 OD1 ASN A 820 1555 1555 2.59 LINK MG MG A 202 OD2 ASP A 833 1555 1555 2.10 LINK MG MG B 202 O2B ANP B 301 1555 1555 1.86 LINK MG MG B 202 O2A ANP B 301 1555 1555 2.17 LINK MG MG B 202 O1G ANP B 301 1555 1555 2.48 LINK MG MG B 202 OD1 ASN B 820 1555 1555 2.40 LINK MG MG B 202 OD2 ASP B 833 1555 1555 2.04 CISPEP 1 VAL B 680 LEU B 681 0 8.06 SITE 1 AC1 3 ANP A 301 ASN A 820 ASP A 833 SITE 1 AC2 19 MG A 202 LEU A 696 SER A 698 GLY A 699 SITE 2 AC2 19 VAL A 700 GLY A 702 VAL A 704 CYS A 721 SITE 3 AC2 19 LYS A 723 THR A 768 GLN A 769 TYR A 770 SITE 4 AC2 19 LEU A 771 SER A 775 ASN A 815 ARG A 819 SITE 5 AC2 19 ASN A 820 LEU A 822 ASP A 833 SITE 1 AC3 3 ANP B 301 ASN B 820 ASP B 833 SITE 1 AC4 18 MG B 202 LEU B 696 GLY B 697 SER B 698 SITE 2 AC4 18 GLY B 699 VAL B 700 GLY B 702 VAL B 704 SITE 3 AC4 18 CYS B 721 LYS B 723 GLN B 769 TYR B 770 SITE 4 AC4 18 LEU B 771 ASN B 815 ARG B 819 ASN B 820 SITE 5 AC4 18 LEU B 822 ASP B 833 CRYST1 193.348 47.981 82.224 90.00 108.11 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005172 0.000000 0.001691 0.00000 SCALE2 0.000000 0.020842 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012796 0.00000