PDB Short entry for 3LRQ HEADER LIGASE 11-FEB-10 3LRQ TITLE CRYSTAL STRUCTURE OF THE U-BOX DOMAIN OF HUMAN UBIQUITIN-PROTEIN TITLE 2 LIGASE (E3), NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET HR4604D. COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE TRIM37; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 1-90; COMPND 5 SYNONYM: TRIPARTITE MOTIF-CONTAINING PROTEIN 37, MULIBREY NANISM COMPND 6 PROTEIN; COMPND 7 EC: 6.3.2.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA0898, MUL, POB1, TRIM37; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET 14-15C KEYWDS STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, NORTHEAST KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, NESG, COILED COIL, LIGASE, METAL- KEYWDS 3 BINDING, PEROXISOME, PHOSPHOPROTEIN, POLYMORPHISM, UBL CONJUGATION, KEYWDS 4 UBL CONJUGATION PATHWAY, ZINC, ZINC-FINGER EXPDTA X-RAY DIFFRACTION AUTHOR A.KUZIN,Y.CHEN,J.SEETHARAMAN,M.MAO,R.XIAO,C.CICCOSANTI,R.SHASTRY, AUTHOR 2 J.K.EVERETT,R.NAIR,T.B.ACTON,B.ROST,G.T.MONTELIONE,L.TONG,J.F.HUNT, AUTHOR 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 17-JUL-19 3LRQ 1 REMARK LINK REVDAT 2 01-NOV-17 3LRQ 1 REMARK REVDAT 1 23-MAR-10 3LRQ 0 JRNL AUTH A.KUZIN,Y.CHEN,J.SEETHARAMAN,M.MAO,R.XIAO,C.CICCOSANTI, JRNL AUTH 2 R.SHASTRY,J.K.EVERETT,R.NAIR,T.B.ACTON,B.ROST, JRNL AUTH 3 G.T.MONTELIONE,L.TONG,J.F.HUNT JRNL TITL E3 UBIQUITIN-PROTEIN LIGASE RING DOMAIN FROM HUMAN JRNL TITL 2 TRIPARTITE MOTIF-CONTAINING PROTEIN 37 (TRIM37), NORTHEAST JRNL TITL 3 STRUCTURAL GENOMICS CONSORTIUM TARGET HR4604D. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.5_2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 36218 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1843 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.0074 - 5.3779 0.96 2703 125 0.1759 0.2149 REMARK 3 2 5.3779 - 4.2735 1.00 2766 149 0.1500 0.2229 REMARK 3 3 4.2735 - 3.7347 0.99 2768 150 0.1557 0.2165 REMARK 3 4 3.7347 - 3.3939 0.99 2771 135 0.1774 0.2213 REMARK 3 5 3.3939 - 3.1510 0.99 2711 146 0.1904 0.2749 REMARK 3 6 3.1510 - 2.9654 0.97 2728 169 0.2022 0.2091 REMARK 3 7 2.9654 - 2.8170 0.97 2700 146 0.2062 0.2565 REMARK 3 8 2.8170 - 2.6945 0.96 2641 149 0.2081 0.2604 REMARK 3 9 2.6945 - 2.5909 0.94 2589 158 0.2047 0.2932 REMARK 3 10 2.5909 - 2.5015 0.92 2592 111 0.2265 0.2634 REMARK 3 11 2.5015 - 2.4234 0.91 2553 154 0.2292 0.2939 REMARK 3 12 2.4234 - 2.3541 0.91 2514 142 0.2212 0.2586 REMARK 3 13 2.3541 - 2.2922 0.83 2339 109 0.2231 0.2507 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 46.12 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2763 REMARK 3 ANGLE : 1.149 3725 REMARK 3 CHIRALITY : 0.076 412 REMARK 3 PLANARITY : 0.004 484 REMARK 3 DIHEDRAL : 19.512 1081 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 48.6405 22.7728 31.7993 REMARK 3 T TENSOR REMARK 3 T11: 0.1247 T22: 0.0662 REMARK 3 T33: 0.0889 T12: 0.0552 REMARK 3 T13: 0.0228 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.1316 L22: 0.4187 REMARK 3 L33: 0.3104 L12: 0.1545 REMARK 3 L13: 0.1476 L23: -0.0085 REMARK 3 S TENSOR REMARK 3 S11: 0.0730 S12: -0.0361 S13: -0.0410 REMARK 3 S21: -0.1980 S22: -0.0645 S23: -0.1346 REMARK 3 S31: 0.0634 S32: -0.0231 S33: 0.0037 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3LRQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057646. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38061 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.292 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.44400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SNB REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 100MM NACL, 5MM DTT, REMARK 280 0.02% NAN3, 10MM TRIS-HCL (PH 7.5) . RESERVOIR SOLUTION: 0.1% W/ REMARK 280 V (+-)-2-METHYL-2,4-PENTANEDIOL, 0.1% W/V 1,2,3-HEPTANETRIOL, REMARK 280 0.1% W/V DIRTHYLENETRIAMINEPENTAKIS (METHYLPHOSPHONIC ACID), 0.1% REMARK 280 W/V D-SORBITOL, 0.1% W/V GLYCEROL, 0.06M HEPES SODIUM, 12.5% REMARK 280 PEG3350, MICROBATCH, TEMPERATURE 293K, PH 6.8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 17.46100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER,24.59 KD,81.5% REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -9 REMARK 465 GLY A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 SER A -1 REMARK 465 CYS A 82 REMARK 465 SER A 83 REMARK 465 LEU A 84 REMARK 465 THR A 85 REMARK 465 LYS A 86 REMARK 465 HIS A 87 REMARK 465 GLU A 88 REMARK 465 GLU A 89 REMARK 465 ASN A 90 REMARK 465 MSE B -9 REMARK 465 GLY B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 SER B -1 REMARK 465 GLN B 80 REMARK 465 LEU B 81 REMARK 465 CYS B 82 REMARK 465 SER B 83 REMARK 465 LEU B 84 REMARK 465 THR B 85 REMARK 465 LYS B 86 REMARK 465 HIS B 87 REMARK 465 GLU B 88 REMARK 465 GLU B 89 REMARK 465 ASN B 90 REMARK 465 MSE C -9 REMARK 465 GLY C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 SER C 83 REMARK 465 LEU C 84 REMARK 465 THR C 85 REMARK 465 LYS C 86 REMARK 465 HIS C 87 REMARK 465 GLU C 88 REMARK 465 GLU C 89 REMARK 465 ASN C 90 REMARK 465 MSE D -9 REMARK 465 GLY D -8 REMARK 465 HIS D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 HIS D -3 REMARK 465 HIS D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 THR D 85 REMARK 465 LYS D 86 REMARK 465 HIS D 87 REMARK 465 GLU D 88 REMARK 465 GLU D 89 REMARK 465 ASN D 90 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER D 83 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 13 47.16 -100.94 REMARK 500 MSE A 19 15.65 54.26 REMARK 500 GLN A 47 -60.03 -108.29 REMARK 500 ARG A 48 146.52 173.90 REMARK 500 ARG A 55 -2.37 74.50 REMARK 500 ASP B 2 -64.10 -16.05 REMARK 500 PHE B 13 42.37 -97.85 REMARK 500 GLN B 47 -74.84 -103.61 REMARK 500 THR B 78 64.29 -67.09 REMARK 500 ILE C 17 -64.26 -92.26 REMARK 500 SER C 32 -0.75 71.41 REMARK 500 GLU C 46 15.14 -142.87 REMARK 500 GLN C 47 -100.03 -145.50 REMARK 500 PRO C 52 8.16 -69.96 REMARK 500 ARG C 55 -4.15 64.52 REMARK 500 PHE D 13 32.66 -99.93 REMARK 500 MSE D 19 -0.47 69.62 REMARK 500 PRO D 52 -2.52 -59.64 REMARK 500 HIS D 53 -59.32 -125.16 REMARK 500 ARG D 55 9.36 54.38 REMARK 500 CYS D 82 29.19 -66.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 28 SG REMARK 620 2 CYS D 31 SG 124.9 REMARK 620 3 CYS D 51 SG 109.6 106.7 REMARK 620 4 CYS D 54 SG 88.3 132.3 89.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 100 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 39 SG REMARK 620 2 CYS B 15 SG 123.2 REMARK 620 3 CYS B 18 SG 106.4 103.9 REMARK 620 4 CYS B 36 SG 114.1 100.9 107.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 31 SG REMARK 620 2 CYS B 28 SG 108.1 REMARK 620 3 CYS B 51 SG 105.4 103.7 REMARK 620 4 CYS B 54 SG 121.8 109.5 106.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 31 SG REMARK 620 2 CYS A 51 SG 110.0 REMARK 620 3 CYS A 54 SG 109.8 106.7 REMARK 620 4 CYS A 28 SG 112.8 102.6 114.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 100 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 39 SG REMARK 620 2 CYS D 18 SG 108.5 REMARK 620 3 CYS D 36 SG 110.1 113.2 REMARK 620 4 CYS D 15 SG 115.9 102.5 106.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 100 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 36 SG REMARK 620 2 CYS C 39 SG 109.5 REMARK 620 3 CYS C 18 SG 109.8 118.7 REMARK 620 4 CYS C 15 SG 104.1 110.0 103.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 28 SG REMARK 620 2 CYS C 31 SG 118.0 REMARK 620 3 CYS C 51 SG 105.6 112.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 100 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 39 SG REMARK 620 2 CYS A 15 SG 109.7 REMARK 620 3 CYS A 18 SG 110.5 108.1 REMARK 620 4 CYS A 36 SG 114.2 101.3 112.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HR4604D RELATED DB: TARGETDB DBREF 3LRQ A 1 90 UNP O94972 TRI37_HUMAN 1 90 DBREF 3LRQ B 1 90 UNP O94972 TRI37_HUMAN 1 90 DBREF 3LRQ C 1 90 UNP O94972 TRI37_HUMAN 1 90 DBREF 3LRQ D 1 90 UNP O94972 TRI37_HUMAN 1 90 SEQADV 3LRQ MSE A -9 UNP O94972 EXPRESSION TAG SEQADV 3LRQ GLY A -8 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS A -7 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS A -6 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS A -5 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS A -4 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS A -3 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS A -2 UNP O94972 EXPRESSION TAG SEQADV 3LRQ SER A -1 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS A 0 UNP O94972 EXPRESSION TAG SEQADV 3LRQ MSE B -9 UNP O94972 EXPRESSION TAG SEQADV 3LRQ GLY B -8 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS B -7 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS B -6 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS B -5 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS B -4 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS B -3 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS B -2 UNP O94972 EXPRESSION TAG SEQADV 3LRQ SER B -1 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS B 0 UNP O94972 EXPRESSION TAG SEQADV 3LRQ MSE C -9 UNP O94972 EXPRESSION TAG SEQADV 3LRQ GLY C -8 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS C -7 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS C -6 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS C -5 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS C -4 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS C -3 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS C -2 UNP O94972 EXPRESSION TAG SEQADV 3LRQ SER C -1 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS C 0 UNP O94972 EXPRESSION TAG SEQADV 3LRQ MSE D -9 UNP O94972 EXPRESSION TAG SEQADV 3LRQ GLY D -8 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS D -7 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS D -6 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS D -5 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS D -4 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS D -3 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS D -2 UNP O94972 EXPRESSION TAG SEQADV 3LRQ SER D -1 UNP O94972 EXPRESSION TAG SEQADV 3LRQ HIS D 0 UNP O94972 EXPRESSION TAG SEQRES 1 A 100 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE ASP GLU SEQRES 2 A 100 GLN SER VAL GLU SER ILE ALA GLU VAL PHE ARG CYS PHE SEQRES 3 A 100 ILE CYS MSE GLU LYS LEU ARG ASP ALA ARG LEU CYS PRO SEQRES 4 A 100 HIS CYS SER LYS LEU CYS CYS PHE SER CYS ILE ARG ARG SEQRES 5 A 100 TRP LEU THR GLU GLN ARG ALA GLN CYS PRO HIS CYS ARG SEQRES 6 A 100 ALA PRO LEU GLN LEU ARG GLU LEU VAL ASN CYS ARG TRP SEQRES 7 A 100 ALA GLU GLU VAL THR GLN GLN LEU ASP THR LEU GLN LEU SEQRES 8 A 100 CYS SER LEU THR LYS HIS GLU GLU ASN SEQRES 1 B 100 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE ASP GLU SEQRES 2 B 100 GLN SER VAL GLU SER ILE ALA GLU VAL PHE ARG CYS PHE SEQRES 3 B 100 ILE CYS MSE GLU LYS LEU ARG ASP ALA ARG LEU CYS PRO SEQRES 4 B 100 HIS CYS SER LYS LEU CYS CYS PHE SER CYS ILE ARG ARG SEQRES 5 B 100 TRP LEU THR GLU GLN ARG ALA GLN CYS PRO HIS CYS ARG SEQRES 6 B 100 ALA PRO LEU GLN LEU ARG GLU LEU VAL ASN CYS ARG TRP SEQRES 7 B 100 ALA GLU GLU VAL THR GLN GLN LEU ASP THR LEU GLN LEU SEQRES 8 B 100 CYS SER LEU THR LYS HIS GLU GLU ASN SEQRES 1 C 100 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE ASP GLU SEQRES 2 C 100 GLN SER VAL GLU SER ILE ALA GLU VAL PHE ARG CYS PHE SEQRES 3 C 100 ILE CYS MSE GLU LYS LEU ARG ASP ALA ARG LEU CYS PRO SEQRES 4 C 100 HIS CYS SER LYS LEU CYS CYS PHE SER CYS ILE ARG ARG SEQRES 5 C 100 TRP LEU THR GLU GLN ARG ALA GLN CYS PRO HIS CYS ARG SEQRES 6 C 100 ALA PRO LEU GLN LEU ARG GLU LEU VAL ASN CYS ARG TRP SEQRES 7 C 100 ALA GLU GLU VAL THR GLN GLN LEU ASP THR LEU GLN LEU SEQRES 8 C 100 CYS SER LEU THR LYS HIS GLU GLU ASN SEQRES 1 D 100 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE ASP GLU SEQRES 2 D 100 GLN SER VAL GLU SER ILE ALA GLU VAL PHE ARG CYS PHE SEQRES 3 D 100 ILE CYS MSE GLU LYS LEU ARG ASP ALA ARG LEU CYS PRO SEQRES 4 D 100 HIS CYS SER LYS LEU CYS CYS PHE SER CYS ILE ARG ARG SEQRES 5 D 100 TRP LEU THR GLU GLN ARG ALA GLN CYS PRO HIS CYS ARG SEQRES 6 D 100 ALA PRO LEU GLN LEU ARG GLU LEU VAL ASN CYS ARG TRP SEQRES 7 D 100 ALA GLU GLU VAL THR GLN GLN LEU ASP THR LEU GLN LEU SEQRES 8 D 100 CYS SER LEU THR LYS HIS GLU GLU ASN MODRES 3LRQ MSE A 1 MET SELENOMETHIONINE MODRES 3LRQ MSE A 19 MET SELENOMETHIONINE MODRES 3LRQ MSE B 1 MET SELENOMETHIONINE MODRES 3LRQ MSE B 19 MET SELENOMETHIONINE MODRES 3LRQ MSE C 1 MET SELENOMETHIONINE MODRES 3LRQ MSE C 19 MET SELENOMETHIONINE MODRES 3LRQ MSE D 1 MET SELENOMETHIONINE MODRES 3LRQ MSE D 19 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 19 8 HET MSE B 1 8 HET MSE B 19 13 HET MSE C 1 8 HET MSE C 19 8 HET MSE D 1 8 HET MSE D 19 8 HET ZN A 100 1 HET ZN A 101 1 HET ZN B 100 1 HET ZN B 101 1 HET ZN C 100 1 HET ZN C 101 1 HET ZN D 100 1 HET ZN D 101 1 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 5 ZN 8(ZN 2+) FORMUL 13 HOH *106(H2 O) HELIX 1 1 HIS A 0 PHE A 13 1 14 HELIX 2 2 PHE A 37 GLN A 47 1 11 HELIX 3 3 GLN A 59 LEU A 63 5 5 HELIX 4 4 TRP A 68 GLN A 80 1 13 HELIX 5 5 MSE B 1 PHE B 13 1 13 HELIX 6 6 PHE B 37 GLN B 47 1 11 HELIX 7 7 GLN B 59 LEU B 63 5 5 HELIX 8 8 TRP B 68 THR B 78 1 11 HELIX 9 9 GLU C 3 PHE C 13 1 11 HELIX 10 10 PHE C 37 GLN C 47 1 11 HELIX 11 11 GLN C 59 LEU C 63 5 5 HELIX 12 12 TRP C 68 LEU C 81 1 14 HELIX 13 13 ASP D 2 PHE D 13 1 12 HELIX 14 14 PHE D 37 GLN D 47 1 11 HELIX 15 15 GLN D 59 LEU D 63 5 5 HELIX 16 16 TRP D 68 CYS D 82 1 15 SHEET 1 A 3 LEU A 34 CYS A 36 0 SHEET 2 A 3 ALA A 25 LEU A 27 -1 N ARG A 26 O CYS A 35 SHEET 3 A 3 VAL A 64 ASN A 65 -1 O VAL A 64 N LEU A 27 SHEET 1 B 3 LEU B 34 CYS B 36 0 SHEET 2 B 3 ALA B 25 LEU B 27 -1 N ARG B 26 O CYS B 35 SHEET 3 B 3 VAL B 64 ASN B 65 -1 O VAL B 64 N LEU B 27 SHEET 1 C 3 LEU C 34 CYS C 36 0 SHEET 2 C 3 ALA C 25 LEU C 27 -1 N ARG C 26 O CYS C 35 SHEET 3 C 3 VAL C 64 ASN C 65 -1 O VAL C 64 N LEU C 27 SHEET 1 D 3 LEU D 34 CYS D 36 0 SHEET 2 D 3 ALA D 25 LEU D 27 -1 N ARG D 26 O CYS D 35 SHEET 3 D 3 VAL D 64 ASN D 65 -1 O VAL D 64 N LEU D 27 LINK C HIS A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ASP A 2 1555 1555 1.33 LINK C CYS A 18 N MSE A 19 1555 1555 1.33 LINK C MSE A 19 N GLU A 20 1555 1555 1.33 LINK C HIS B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N ASP B 2 1555 1555 1.33 LINK C CYS B 18 N MSE B 19 1555 1555 1.33 LINK C MSE B 19 N GLU B 20 1555 1555 1.33 LINK C MSE C 1 N ASP C 2 1555 1555 1.33 LINK C CYS C 18 N MSE C 19 1555 1555 1.33 LINK C MSE C 19 N GLU C 20 1555 1555 1.33 LINK C MSE D 1 N ASP D 2 1555 1555 1.33 LINK C CYS D 18 N MSE D 19 1555 1555 1.33 LINK C MSE D 19 N GLU D 20 1555 1555 1.33 LINK SG CYS D 28 ZN ZN D 101 1555 1555 2.12 LINK SG CYS B 39 ZN ZN B 100 1555 1555 2.24 LINK SG CYS B 31 ZN ZN B 101 1555 1555 2.26 LINK SG CYS A 31 ZN ZN A 101 1555 1555 2.27 LINK SG CYS B 15 ZN ZN B 100 1555 1555 2.31 LINK SG CYS D 39 ZN ZN D 100 1555 1555 2.32 LINK SG CYS B 28 ZN ZN B 101 1555 1555 2.36 LINK SG CYS C 36 ZN ZN C 100 1555 1555 2.37 LINK SG CYS C 28 ZN ZN C 101 1555 1555 2.37 LINK SG CYS A 39 ZN ZN A 100 1555 1555 2.37 LINK SG CYS C 39 ZN ZN C 100 1555 1555 2.37 LINK SG CYS D 18 ZN ZN D 100 1555 1555 2.38 LINK SG CYS A 51 ZN ZN A 101 1555 1555 2.38 LINK SG CYS C 31 ZN ZN C 101 1555 1555 2.39 LINK SG CYS A 15 ZN ZN A 100 1555 1555 2.40 LINK SG CYS C 18 ZN ZN C 100 1555 1555 2.40 LINK SG CYS C 51 ZN ZN C 101 1555 1555 2.41 LINK SG CYS A 18 ZN ZN A 100 1555 1555 2.42 LINK SG CYS A 54 ZN ZN A 101 1555 1555 2.42 LINK SG CYS D 31 ZN ZN D 101 1555 1555 2.43 LINK SG CYS D 51 ZN ZN D 101 1555 1555 2.43 LINK SG CYS D 36 ZN ZN D 100 1555 1555 2.44 LINK SG CYS A 36 ZN ZN A 100 1555 1555 2.44 LINK SG CYS D 15 ZN ZN D 100 1555 1555 2.44 LINK SG CYS B 51 ZN ZN B 101 1555 1555 2.44 LINK SG CYS A 28 ZN ZN A 101 1555 1555 2.45 LINK SG CYS C 15 ZN ZN C 100 1555 1555 2.46 LINK SG CYS B 18 ZN ZN B 100 1555 1555 2.49 LINK SG CYS B 54 ZN ZN B 101 1555 1555 2.52 LINK SG CYS B 36 ZN ZN B 100 1555 1555 2.53 LINK SG CYS D 54 ZN ZN D 101 1555 1555 2.86 SITE 1 AC1 4 CYS A 15 CYS A 18 CYS A 36 CYS A 39 SITE 1 AC2 4 CYS A 28 CYS A 31 CYS A 51 CYS A 54 SITE 1 AC3 4 CYS B 15 CYS B 18 CYS B 36 CYS B 39 SITE 1 AC4 4 CYS B 28 CYS B 31 CYS B 51 CYS B 54 SITE 1 AC5 4 CYS C 15 CYS C 18 CYS C 36 CYS C 39 SITE 1 AC6 4 CYS C 28 CYS C 31 CYS C 51 CYS C 54 SITE 1 AC7 4 CYS D 15 CYS D 18 CYS D 36 CYS D 39 SITE 1 AC8 4 CYS D 28 CYS D 31 CYS D 51 CYS D 54 CRYST1 72.544 34.922 86.709 90.00 90.78 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013785 0.000000 0.000188 0.00000 SCALE2 0.000000 0.028635 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011534 0.00000