PDB Short entry for 3MET HEADER TRANSCRIPTION 31-MAR-10 3MET TITLE CRYSTAL STRUCTURE OF SGF29 IN COMPLEX WITH H3K4ME2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SAGA-ASSOCIATED FACTOR 29 HOMOLOG; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 115-293; COMPND 5 SYNONYM: COILED-COIL DOMAIN-CONTAINING PROTEIN 101; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HISTONE H3; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: UNP RESIDUES 2-12; COMPND 11 SYNONYM: H3K4ME2 11MER; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CCDC101, SGF29; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-V2R-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 14 ORGANISM_COMMON: CLAWED FROG,COMMON PLATANNA,PLATANNA; SOURCE 15 ORGANISM_TAXID: 8355; SOURCE 16 OTHER_DETAILS: H3K4ME2 11MER KEYWDS STRUCTURAL GENOMICS CONSORTIUM, SGC, NUCLEUS, TRANSCRIPTION, KEYWDS 2 TRANSCRIPTION REGULATION, CHROMOSOMAL PROTEIN, DNA-BINDING, KEYWDS 3 NUCLEOSOME CORE EXPDTA X-RAY DIFFRACTION AUTHOR C.B.BIAN,C.XU,R.LAM,C.BOUNTRA,C.H.ARROWSMITH,J.WEIGELT,A.M.EDWARDS, AUTHOR 2 A.BOCHKAREV,J.MIN REVDAT 4 03-AUG-11 3MET 1 JRNL REVDAT 3 29-JUN-11 3MET 1 JRNL REVDAT 2 05-MAY-10 3MET 1 AUTHOR REVDAT 1 28-APR-10 3MET 0 JRNL AUTH C.BIAN,C.XU,J.RUAN,K.K.LEE,T.L.BURKE,W.TEMPEL,D.BARSYTE, JRNL AUTH 2 J.LI,M.WU,B.O.ZHOU,B.E.FLEHARTY,A.PAULSON,A.ALLALI-HASSANI, JRNL AUTH 3 J.Q.ZHOU,G.MER,P.A.GRANT,J.L.WORKMAN,J.ZANG,J.MIN JRNL TITL SGF29 BINDS HISTONE H3K4ME2/3 AND IS REQUIRED FOR SAGA JRNL TITL 2 COMPLEX RECRUITMENT AND HISTONE H3 ACETYLATION. JRNL REF EMBO J. V. 30 2829 2011 JRNL REFN ISSN 0261-4189 JRNL PMID 21685874 JRNL DOI 10.1038/EMBOJ.2011.193 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22916 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1233 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1604 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 91 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2783 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 197 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11000 REMARK 3 B22 (A**2) : -0.07000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.215 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.117 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.139 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2960 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2024 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4058 ; 1.471 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4941 ; 0.901 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 377 ; 7.496 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 129 ;28.086 ;23.566 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 450 ;13.671 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;19.274 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 443 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3308 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 576 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1857 ; 0.811 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 717 ; 0.198 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3007 ; 1.457 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1103 ; 2.333 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1043 ; 3.425 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MET COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-10. REMARK 100 THE RCSB ID CODE IS RCSB058455. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24197 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 55.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-28% PEG3350, 0.1M BIS-TRIS PH 5.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K, VAPOR DIFFUSION, REMARK 280 SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.08100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.93850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.70550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.93850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.08100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.70550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 288 REMARK 465 GLU A 289 REMARK 465 PRO A 290 REMARK 465 LYS A 291 REMARK 465 LYS A 292 REMARK 465 LYS A 293 REMARK 465 GLY B 114 REMARK 465 ARG B 115 REMARK 465 ARG B 116 REMARK 465 GLY B 117 REMARK 465 LYS B 292 REMARK 465 LYS B 293 REMARK 465 LYS C 9 REMARK 465 SER C 10 REMARK 465 THR C 11 REMARK 465 GLN D 5 REMARK 465 THR D 6 REMARK 465 ALA D 7 REMARK 465 ARG D 8 REMARK 465 LYS D 9 REMARK 465 SER D 10 REMARK 465 THR D 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 122 CG CD1 CD2 REMARK 470 ASP A 153 CG OD1 OD2 REMARK 470 ARG A 157 CD NE CZ NH1 NH2 REMARK 470 LYS A 167 CE NZ REMARK 470 GLU A 197 CD OE1 OE2 REMARK 470 ARG A 208 CZ NH1 NH2 REMARK 470 VAL B 118 CG1 CG2 REMARK 470 GLN B 125 CG CD OE1 NE2 REMARK 470 ASP B 139 CG OD1 OD2 REMARK 470 LYS B 140 CG CD CE NZ REMARK 470 LYS B 167 CE NZ REMARK 470 GLU B 197 CG CD OE1 OE2 REMARK 470 GLU B 198 CG CD OE1 OE2 REMARK 470 LYS B 230 CE NZ REMARK 470 ASP B 271 CG OD1 OD2 REMARK 470 LYS B 291 CG CD CE NZ REMARK 470 GLN C 5 CG CD OE1 NE2 REMARK 470 ARG D 2 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 231 -11.38 83.85 REMARK 500 LYS B 288 30.86 -95.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 12 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ME9 RELATED DB: PDB REMARK 900 RELATED ID: 3MEA RELATED DB: PDB REMARK 900 RELATED ID: 3MEU RELATED DB: PDB REMARK 900 RELATED ID: 3MEV RELATED DB: PDB REMARK 900 RELATED ID: 3MEW RELATED DB: PDB DBREF 3MET A 115 293 UNP Q96ES7 SGF29_HUMAN 115 293 DBREF 3MET B 115 293 UNP Q96ES7 SGF29_HUMAN 115 293 DBREF 3MET C 1 11 UNP Q92133 Q92133_XENLA 2 12 DBREF 3MET D 1 11 UNP Q92133 Q92133_XENLA 2 12 SEQADV 3MET GLY A 114 UNP Q96ES7 INSERTION SEQADV 3MET GLY B 114 UNP Q96ES7 INSERTION SEQRES 1 A 180 GLY ARG ARG GLY VAL LEU MSE THR LEU LEU GLN GLN SER SEQRES 2 A 180 ALA MSE THR LEU PRO LEU TRP ILE GLY LYS PRO GLY ASP SEQRES 3 A 180 LYS PRO PRO PRO LEU CYS GLY ALA ILE PRO ALA SER GLY SEQRES 4 A 180 ASP TYR VAL ALA ARG PRO GLY ASP LYS VAL ALA ALA ARG SEQRES 5 A 180 VAL LYS ALA VAL ASP GLY ASP GLU GLN TRP ILE LEU ALA SEQRES 6 A 180 GLU VAL VAL SER TYR SER HIS ALA THR ASN LYS TYR GLU SEQRES 7 A 180 VAL ASP ASP ILE ASP GLU GLU GLY LYS GLU ARG HIS THR SEQRES 8 A 180 LEU SER ARG ARG ARG VAL ILE PRO LEU PRO GLN TRP LYS SEQRES 9 A 180 ALA ASN PRO GLU THR ASP PRO GLU ALA LEU PHE GLN LYS SEQRES 10 A 180 GLU GLN LEU VAL LEU ALA LEU TYR PRO GLN THR THR CYS SEQRES 11 A 180 PHE TYR ARG ALA LEU ILE HIS ALA PRO PRO GLN ARG PRO SEQRES 12 A 180 GLN ASP ASP TYR SER VAL LEU PHE GLU ASP THR SER TYR SEQRES 13 A 180 ALA ASP GLY TYR SER PRO PRO LEU ASN VAL ALA GLN ARG SEQRES 14 A 180 TYR VAL VAL ALA CYS LYS GLU PRO LYS LYS LYS SEQRES 1 B 180 GLY ARG ARG GLY VAL LEU MSE THR LEU LEU GLN GLN SER SEQRES 2 B 180 ALA MSE THR LEU PRO LEU TRP ILE GLY LYS PRO GLY ASP SEQRES 3 B 180 LYS PRO PRO PRO LEU CYS GLY ALA ILE PRO ALA SER GLY SEQRES 4 B 180 ASP TYR VAL ALA ARG PRO GLY ASP LYS VAL ALA ALA ARG SEQRES 5 B 180 VAL LYS ALA VAL ASP GLY ASP GLU GLN TRP ILE LEU ALA SEQRES 6 B 180 GLU VAL VAL SER TYR SER HIS ALA THR ASN LYS TYR GLU SEQRES 7 B 180 VAL ASP ASP ILE ASP GLU GLU GLY LYS GLU ARG HIS THR SEQRES 8 B 180 LEU SER ARG ARG ARG VAL ILE PRO LEU PRO GLN TRP LYS SEQRES 9 B 180 ALA ASN PRO GLU THR ASP PRO GLU ALA LEU PHE GLN LYS SEQRES 10 B 180 GLU GLN LEU VAL LEU ALA LEU TYR PRO GLN THR THR CYS SEQRES 11 B 180 PHE TYR ARG ALA LEU ILE HIS ALA PRO PRO GLN ARG PRO SEQRES 12 B 180 GLN ASP ASP TYR SER VAL LEU PHE GLU ASP THR SER TYR SEQRES 13 B 180 ALA ASP GLY TYR SER PRO PRO LEU ASN VAL ALA GLN ARG SEQRES 14 B 180 TYR VAL VAL ALA CYS LYS GLU PRO LYS LYS LYS SEQRES 1 C 11 ALA ARG THR MLY GLN THR ALA ARG LYS SER THR SEQRES 1 D 11 ALA ARG THR MLY GLN THR ALA ARG LYS SER THR MODRES 3MET MSE A 120 MET SELENOMETHIONINE MODRES 3MET MSE A 128 MET SELENOMETHIONINE MODRES 3MET MSE B 120 MET SELENOMETHIONINE MODRES 3MET MSE B 128 MET SELENOMETHIONINE MODRES 3MET MLY C 4 LYS N-DIMETHYL-LYSINE MODRES 3MET MLY D 4 LYS N-DIMETHYL-LYSINE HET MSE A 120 8 HET MSE A 128 8 HET MSE B 120 8 HET MSE B 128 13 HET MLY C 4 11 HET MLY D 4 11 HET GOL B 1 6 HET UNX A 1 1 HET SO4 B 2 5 HET UNX A 2 1 HET UNX B 3 1 HET SO4 C 12 5 HETNAM MSE SELENOMETHIONINE HETNAM MLY N-DIMETHYL-LYSINE HETNAM GOL GLYCEROL HETNAM UNX UNKNOWN ATOM OR ION HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 MLY 2(C8 H18 N2 O2) FORMUL 5 GOL C3 H8 O3 FORMUL 6 UNX 3(X) FORMUL 7 SO4 2(O4 S 2-) FORMUL 11 HOH *197(H2 O) HELIX 1 1 GLY A 114 LEU A 130 1 17 HELIX 2 2 ASP A 223 LEU A 227 5 5 HELIX 3 3 ALA A 280 ARG A 282 5 3 HELIX 4 4 VAL B 118 LEU B 130 1 13 HELIX 5 5 ASP B 223 LEU B 227 5 5 HELIX 6 6 ALA B 280 ARG B 282 5 3 HELIX 7 7 THR C 3 ARG C 8 1 6 SHEET 1 A 6 HIS A 203 SER A 206 0 SHEET 2 A 6 LYS A 189 ASP A 194 -1 N TYR A 190 O LEU A 205 SHEET 3 A 6 GLU A 173 SER A 184 -1 N VAL A 181 O GLU A 191 SHEET 4 A 6 CYS A 243 ALA A 251 -1 O PHE A 244 N TRP A 175 SHEET 5 A 6 TYR A 260 PHE A 264 -1 O LEU A 263 N LEU A 248 SHEET 6 A 6 LEU A 277 VAL A 279 -1 O VAL A 279 N TYR A 260 SHEET 1 B 6 VAL A 210 PRO A 212 0 SHEET 2 B 6 LYS A 161 LYS A 167 -1 N ALA A 163 O ILE A 211 SHEET 3 B 6 GLU A 173 SER A 184 -1 O ILE A 176 N ALA A 164 SHEET 4 B 6 CYS A 243 ALA A 251 -1 O PHE A 244 N TRP A 175 SHEET 5 B 6 LEU A 233 LEU A 237 -1 N VAL A 234 O ALA A 247 SHEET 6 B 6 VAL A 284 ALA A 286 -1 O VAL A 285 N LEU A 235 SHEET 1 C 6 ARG B 202 SER B 206 0 SHEET 2 C 6 LYS B 189 ASP B 194 -1 N TYR B 190 O LEU B 205 SHEET 3 C 6 GLU B 173 SER B 184 -1 N VAL B 181 O GLU B 191 SHEET 4 C 6 CYS B 243 ALA B 251 -1 O PHE B 244 N TRP B 175 SHEET 5 C 6 TYR B 260 PHE B 264 -1 O SER B 261 N HIS B 250 SHEET 6 C 6 LEU B 277 VAL B 279 -1 O VAL B 279 N TYR B 260 SHEET 1 D 6 VAL B 210 PRO B 212 0 SHEET 2 D 6 LYS B 161 LYS B 167 -1 N ALA B 163 O ILE B 211 SHEET 3 D 6 GLU B 173 SER B 184 -1 O ILE B 176 N ALA B 164 SHEET 4 D 6 CYS B 243 ALA B 251 -1 O PHE B 244 N TRP B 175 SHEET 5 D 6 LEU B 233 LEU B 237 -1 N VAL B 234 O ALA B 247 SHEET 6 D 6 VAL B 284 ALA B 286 -1 O VAL B 285 N LEU B 235 LINK C LEU A 119 N MSE A 120 1555 1555 1.33 LINK C MSE A 120 N THR A 121 1555 1555 1.34 LINK C ALA A 127 N MSE A 128 1555 1555 1.33 LINK C MSE A 128 N THR A 129 1555 1555 1.33 LINK C LEU B 119 N MSE B 120 1555 1555 1.33 LINK C MSE B 120 N THR B 121 1555 1555 1.34 LINK C ALA B 127 N MSE B 128 1555 1555 1.34 LINK C MSE B 128 N THR B 129 1555 1555 1.33 LINK C THR C 3 N MLY C 4 1555 1555 1.33 LINK C MLY C 4 N GLN C 5 1555 1555 1.33 LINK C THR D 3 N MLY D 4 1555 1555 1.32 SITE 1 AC1 8 HOH B 44 GLN B 124 LEU B 237 TYR B 238 SITE 2 AC1 8 PRO B 239 GLN B 240 THR B 241 HOH B 305 SITE 1 AC2 3 SER B 206 ARG B 208 ARG B 209 SITE 1 AC3 6 ARG A 115 HOH A 329 ARG C 2 THR C 6 SITE 2 AC3 6 HOH C 161 HOH C 184 CRYST1 50.162 65.411 105.877 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019935 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015288 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009445 0.00000