PDB Short entry for 3MOQ HEADER NEUROPEPTIDE, IMMUNE SYSTEM 23-APR-10 3MOQ TITLE AMYLOID BETA(18-41) PEPTIDE FUSION WITH NEW ANTIGEN RECEPTOR VARIABLE TITLE 2 DOMAIN FROM SHARKS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEW ANTIGEN RECEPTOR VARIABLE DOMAIN,P3(40) PEPTIDE FROM COMPND 3 AMYLOID BETA A4 PROTEIN,NEW ANTIGEN RECEPTOR VARIABLE DOMAIN; COMPND 4 CHAIN: A, B, C, D; COMPND 5 SYNONYM: ABPP,APPI,APP,ALZHEIMER DISEASE AMYLOID PROTEIN,AMYLOID COMPND 6 PRECURSOR PROTEIN,BETA-AMYLOID PRECURSOR PROTEIN,CEREBRAL VASCULAR COMPND 7 AMYLOID PEPTIDE,CVAP,PREA4,PROTEASE NEXIN-II,PN-II; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: CHIMERA OF NEW ANTIGEN RECEPTOR VARIABLE DOMAIN COMPND 10 (RESIDUES 1-87 AND 102-113 FROM UNP Q6X1E6) INSERTED WITH AMYLOID COMPND 11 BETA 18-41 (RESIDUES 689-712 FROM UNP P05067) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORECTOLOBUS MACULATUS, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: SPOTTED WOBBEGONG, HUMAN; SOURCE 4 ORGANISM_TAXID: 168098, 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGC KEYWDS AB-IGNAR, AB-12Y-2, RECEPTOR, AMYLOID, GLYCOPROTEIN, MEMBRANE, KEYWDS 2 PROTEASE INHIBITOR, SERINE PROTEASE INHIBITOR, TRANSMEMBRANE, KEYWDS 3 AMYLOID BETA FUSION WITH IGNAR, CHIMERA OF IMMUNE SYSTEM AND AMYLOID KEYWDS 4 PEPTIDE, IMMUNE SYSTEM, NEUROPEPTIDE EXPDTA X-RAY DIFFRACTION AUTHOR V.A.STRELTSOV REVDAT 3 01-NOV-23 3MOQ 1 REMARK REVDAT 2 21-JUN-17 3MOQ 1 COMPND SOURCE REVDAT 1 16-FEB-11 3MOQ 0 JRNL AUTH V.A.STRELTSOV,J.N.VARGHESE,C.L.MASTERS,S.D.NUTTALL JRNL TITL CRYSTAL STRUCTURE OF THE AMYLOID-{BETA} P3 FRAGMENT PROVIDES JRNL TITL 2 A MODEL FOR OLIGOMER FORMATION IN ALZHEIMER'S DISEASE JRNL REF J.NEUROSCI. V. 31 1419 2011 JRNL REFN ISSN 0270-6474 JRNL PMID 21273426 JRNL DOI 10.1523/JNEUROSCI.4259-10.2011 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35851 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1914 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2597 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 151 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3780 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 559 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.80000 REMARK 3 B22 (A**2) : -0.80000 REMARK 3 B33 (A**2) : 1.20000 REMARK 3 B12 (A**2) : -0.40000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.192 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.305 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3836 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5172 ; 1.306 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 500 ; 5.251 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 152 ;31.327 ;23.947 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 664 ;17.311 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.545 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 592 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2820 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2456 ; 0.588 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3920 ; 1.088 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1380 ; 1.650 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1252 ; 2.700 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): 64.1790 0.9020 -21.4760 REMARK 3 T TENSOR REMARK 3 T11: 0.2165 T22: 0.1550 REMARK 3 T33: 0.0770 T12: 0.0464 REMARK 3 T13: 0.0614 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 2.0843 L22: 1.2480 REMARK 3 L33: 4.2376 L12: 1.0793 REMARK 3 L13: -2.1572 L23: -1.2875 REMARK 3 S TENSOR REMARK 3 S11: -0.1366 S12: -0.0393 S13: -0.1188 REMARK 3 S21: -0.3084 S22: 0.0249 S23: -0.2448 REMARK 3 S31: 0.3259 S32: 0.1368 S33: 0.1117 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 126 REMARK 3 ORIGIN FOR THE GROUP (A): 22.1480 -14.7330 -12.0760 REMARK 3 T TENSOR REMARK 3 T11: 0.2391 T22: 0.1972 REMARK 3 T33: 0.0924 T12: 0.0207 REMARK 3 T13: -0.0420 T23: -0.0558 REMARK 3 L TENSOR REMARK 3 L11: 4.1648 L22: 0.6513 REMARK 3 L33: 2.1106 L12: 1.3234 REMARK 3 L13: 2.2339 L23: 0.3738 REMARK 3 S TENSOR REMARK 3 S11: 0.0518 S12: -0.4079 S13: -0.1369 REMARK 3 S21: 0.0323 S22: -0.0960 S23: -0.0988 REMARK 3 S31: -0.1092 S32: -0.1805 S33: 0.0442 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 126 REMARK 3 ORIGIN FOR THE GROUP (A): 35.7620 7.5430 5.9870 REMARK 3 T TENSOR REMARK 3 T11: 0.1177 T22: 0.1509 REMARK 3 T33: 0.0219 T12: 0.0029 REMARK 3 T13: -0.0169 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.5804 L22: 1.0709 REMARK 3 L33: 2.4168 L12: -0.9134 REMARK 3 L13: -1.9086 L23: 1.1046 REMARK 3 S TENSOR REMARK 3 S11: -0.0180 S12: 0.0133 S13: -0.0108 REMARK 3 S21: 0.0527 S22: -0.0081 S23: 0.0942 REMARK 3 S31: 0.0328 S32: 0.0037 S33: 0.0261 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 126 REMARK 3 ORIGIN FOR THE GROUP (A): 60.0280 -29.0570 -3.9110 REMARK 3 T TENSOR REMARK 3 T11: 0.4365 T22: 0.4555 REMARK 3 T33: 0.1920 T12: 0.2217 REMARK 3 T13: 0.1277 T23: 0.1358 REMARK 3 L TENSOR REMARK 3 L11: 2.2371 L22: 12.6330 REMARK 3 L33: 11.8740 L12: -4.4672 REMARK 3 L13: 4.3208 L23: -9.9658 REMARK 3 S TENSOR REMARK 3 S11: 0.7474 S12: 0.6619 S13: 0.0859 REMARK 3 S21: -1.7700 S22: -1.4109 S23: -0.7125 REMARK 3 S31: 1.6137 S32: 1.7411 S33: 0.6635 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MOQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058809. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95664 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35851 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.054 REMARK 200 RESOLUTION RANGE LOW (A) : 26.329 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.92800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1VER REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 6000, 0.2M AMMONIUM CHLORIDE, REMARK 280 0.1M MES, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.97133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.48567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP D 93 85.22 -62.86 REMARK 500 ASN D 97 90.04 -6.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 275 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH A 280 DISTANCE = 6.78 ANGSTROMS REMARK 525 HOH B 222 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B 245 DISTANCE = 7.60 ANGSTROMS REMARK 525 HOH C 130 DISTANCE = 7.67 ANGSTROMS REMARK 525 HOH C 170 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH C 192 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH C 296 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH C 312 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH C 313 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH C 316 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH C 320 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH D 145 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH D 182 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH D 288 DISTANCE = 6.82 ANGSTROMS DBREF 3MOQ A 1 87 UNP Q6X1E6 Q6X1E6_9CHON 1 87 DBREF 3MOQ A 88 111 UNP P05067 A4_HUMAN 689 712 DBREF 3MOQ A 113 124 UNP Q6X1E6 Q6X1E6_9CHON 102 113 DBREF 3MOQ B 1 87 UNP Q6X1E6 Q6X1E6_9CHON 1 87 DBREF 3MOQ B 88 111 UNP P05067 A4_HUMAN 689 712 DBREF 3MOQ B 113 124 UNP Q6X1E6 Q6X1E6_9CHON 102 113 DBREF 3MOQ C 1 87 UNP Q6X1E6 Q6X1E6_9CHON 1 87 DBREF 3MOQ C 88 111 UNP P05067 A4_HUMAN 689 712 DBREF 3MOQ C 113 124 UNP Q6X1E6 Q6X1E6_9CHON 102 113 DBREF 3MOQ D 1 87 UNP Q6X1E6 Q6X1E6_9CHON 1 87 DBREF 3MOQ D 88 111 UNP P05067 A4_HUMAN 689 712 DBREF 3MOQ D 113 124 UNP Q6X1E6 Q6X1E6_9CHON 102 113 SEQADV 3MOQ GLY A 112 UNP P05067 LINKER SEQADV 3MOQ ALA A 125 UNP Q6X1E6 EXPRESSION TAG SEQADV 3MOQ ALA A 126 UNP Q6X1E6 EXPRESSION TAG SEQADV 3MOQ GLY B 112 UNP P05067 LINKER SEQADV 3MOQ ALA B 125 UNP Q6X1E6 EXPRESSION TAG SEQADV 3MOQ ALA B 126 UNP Q6X1E6 EXPRESSION TAG SEQADV 3MOQ GLY C 112 UNP P05067 LINKER SEQADV 3MOQ ALA C 125 UNP Q6X1E6 EXPRESSION TAG SEQADV 3MOQ ALA C 126 UNP Q6X1E6 EXPRESSION TAG SEQADV 3MOQ GLY D 112 UNP P05067 LINKER SEQADV 3MOQ ALA D 125 UNP Q6X1E6 EXPRESSION TAG SEQADV 3MOQ ALA D 126 UNP Q6X1E6 EXPRESSION TAG SEQRES 1 A 126 ALA TRP VAL ASP GLN THR PRO ARG THR ALA THR LYS GLU SEQRES 2 A 126 THR GLY GLU SER LEU THR ILE ASN CYS VAL LEU ARG ASP SEQRES 3 A 126 ALA SER PHE GLU LEU LYS ASP THR GLY TRP TYR ARG THR SEQRES 4 A 126 LYS LEU GLY SER THR ASN GLU GLN SER ILE SER ILE GLY SEQRES 5 A 126 GLY ARG TYR VAL GLU THR VAL ASN LYS GLY SER LYS SER SEQRES 6 A 126 PHE SER LEU ARG ILE SER ASP LEU ARG VAL GLU ASP SER SEQRES 7 A 126 GLY THR TYR LYS CYS GLN ALA PHE TYR VAL PHE PHE ALA SEQRES 8 A 126 GLU ASP VAL GLY SER ASN LYS GLY ALA ILE ILE GLY LEU SEQRES 9 A 126 MET VAL GLY GLY VAL VAL ILE GLY GLY GLU LYS GLY ALA SEQRES 10 A 126 GLY THR ALA LEU THR VAL LYS ALA ALA SEQRES 1 B 126 ALA TRP VAL ASP GLN THR PRO ARG THR ALA THR LYS GLU SEQRES 2 B 126 THR GLY GLU SER LEU THR ILE ASN CYS VAL LEU ARG ASP SEQRES 3 B 126 ALA SER PHE GLU LEU LYS ASP THR GLY TRP TYR ARG THR SEQRES 4 B 126 LYS LEU GLY SER THR ASN GLU GLN SER ILE SER ILE GLY SEQRES 5 B 126 GLY ARG TYR VAL GLU THR VAL ASN LYS GLY SER LYS SER SEQRES 6 B 126 PHE SER LEU ARG ILE SER ASP LEU ARG VAL GLU ASP SER SEQRES 7 B 126 GLY THR TYR LYS CYS GLN ALA PHE TYR VAL PHE PHE ALA SEQRES 8 B 126 GLU ASP VAL GLY SER ASN LYS GLY ALA ILE ILE GLY LEU SEQRES 9 B 126 MET VAL GLY GLY VAL VAL ILE GLY GLY GLU LYS GLY ALA SEQRES 10 B 126 GLY THR ALA LEU THR VAL LYS ALA ALA SEQRES 1 C 126 ALA TRP VAL ASP GLN THR PRO ARG THR ALA THR LYS GLU SEQRES 2 C 126 THR GLY GLU SER LEU THR ILE ASN CYS VAL LEU ARG ASP SEQRES 3 C 126 ALA SER PHE GLU LEU LYS ASP THR GLY TRP TYR ARG THR SEQRES 4 C 126 LYS LEU GLY SER THR ASN GLU GLN SER ILE SER ILE GLY SEQRES 5 C 126 GLY ARG TYR VAL GLU THR VAL ASN LYS GLY SER LYS SER SEQRES 6 C 126 PHE SER LEU ARG ILE SER ASP LEU ARG VAL GLU ASP SER SEQRES 7 C 126 GLY THR TYR LYS CYS GLN ALA PHE TYR VAL PHE PHE ALA SEQRES 8 C 126 GLU ASP VAL GLY SER ASN LYS GLY ALA ILE ILE GLY LEU SEQRES 9 C 126 MET VAL GLY GLY VAL VAL ILE GLY GLY GLU LYS GLY ALA SEQRES 10 C 126 GLY THR ALA LEU THR VAL LYS ALA ALA SEQRES 1 D 126 ALA TRP VAL ASP GLN THR PRO ARG THR ALA THR LYS GLU SEQRES 2 D 126 THR GLY GLU SER LEU THR ILE ASN CYS VAL LEU ARG ASP SEQRES 3 D 126 ALA SER PHE GLU LEU LYS ASP THR GLY TRP TYR ARG THR SEQRES 4 D 126 LYS LEU GLY SER THR ASN GLU GLN SER ILE SER ILE GLY SEQRES 5 D 126 GLY ARG TYR VAL GLU THR VAL ASN LYS GLY SER LYS SER SEQRES 6 D 126 PHE SER LEU ARG ILE SER ASP LEU ARG VAL GLU ASP SER SEQRES 7 D 126 GLY THR TYR LYS CYS GLN ALA PHE TYR VAL PHE PHE ALA SEQRES 8 D 126 GLU ASP VAL GLY SER ASN LYS GLY ALA ILE ILE GLY LEU SEQRES 9 D 126 MET VAL GLY GLY VAL VAL ILE GLY GLY GLU LYS GLY ALA SEQRES 10 D 126 GLY THR ALA LEU THR VAL LYS ALA ALA FORMUL 5 HOH *559(H2 O) HELIX 1 1 ARG A 74 ASP A 77 5 4 HELIX 2 2 ASP A 93 ASN A 97 5 5 HELIX 3 3 LYS B 61 SER B 63 5 3 HELIX 4 4 ARG B 74 ASP B 77 5 4 HELIX 5 5 ARG C 74 ASP C 77 5 4 HELIX 6 6 ARG D 74 ASP D 77 5 4 SHEET 1 A 4 TRP A 2 THR A 6 0 SHEET 2 A 4 LEU A 18 ARG A 25 -1 O ASN A 21 N THR A 6 SHEET 3 A 4 SER A 65 ILE A 70 -1 O ILE A 70 N LEU A 18 SHEET 4 A 4 TYR A 55 ASN A 60 -1 N ASN A 60 O SER A 65 SHEET 1 B10 THR A 9 GLU A 13 0 SHEET 2 B10 THR A 119 LYS A 124 1 O THR A 122 N ALA A 10 SHEET 3 B10 GLY A 79 PHE A 90 -1 N GLY A 79 O LEU A 121 SHEET 4 B10 VAL A 109 LYS A 115 -1 O VAL A 110 N PHE A 89 SHEET 5 B10 ALA A 100 MET A 105 -1 N MET A 105 O VAL A 109 SHEET 6 B10 ALA D 100 MET D 105 -1 O LEU D 104 N LEU A 104 SHEET 7 B10 VAL D 109 LYS D 115 -1 O ILE D 111 N ILE D 102 SHEET 8 B10 GLY D 79 PHE D 90 -1 N PHE D 89 O VAL D 110 SHEET 9 B10 THR D 119 LYS D 124 -1 O LEU D 121 N GLY D 79 SHEET 10 B10 THR D 9 GLU D 13 1 N LYS D 12 O LYS D 124 SHEET 1 C10 GLN A 47 SER A 48 0 SHEET 2 C10 ASP A 33 LYS A 40 -1 N ARG A 38 O GLN A 47 SHEET 3 C10 GLY A 79 PHE A 90 -1 O PHE A 86 N ASP A 33 SHEET 4 C10 VAL A 109 LYS A 115 -1 O VAL A 110 N PHE A 89 SHEET 5 C10 ALA A 100 MET A 105 -1 N MET A 105 O VAL A 109 SHEET 6 C10 ALA D 100 MET D 105 -1 O LEU D 104 N LEU A 104 SHEET 7 C10 VAL D 109 LYS D 115 -1 O ILE D 111 N ILE D 102 SHEET 8 C10 GLY D 79 PHE D 90 -1 N PHE D 89 O VAL D 110 SHEET 9 C10 ASP D 33 LYS D 40 -1 N ASP D 33 O PHE D 86 SHEET 10 C10 GLN D 47 SER D 48 -1 O GLN D 47 N ARG D 38 SHEET 1 D 4 TRP B 2 THR B 6 0 SHEET 2 D 4 LEU B 18 ARG B 25 -1 O ARG B 25 N TRP B 2 SHEET 3 D 4 SER B 65 ILE B 70 -1 O ILE B 70 N LEU B 18 SHEET 4 D 4 TYR B 55 ASN B 60 -1 N ASN B 60 O SER B 65 SHEET 1 E10 THR B 9 GLU B 13 0 SHEET 2 E10 THR B 119 LYS B 124 1 O LYS B 124 N LYS B 12 SHEET 3 E10 GLY B 79 PHE B 90 -1 N GLY B 79 O LEU B 121 SHEET 4 E10 VAL B 109 LYS B 115 -1 O VAL B 110 N PHE B 89 SHEET 5 E10 ALA B 100 MET B 105 -1 N ILE B 102 O ILE B 111 SHEET 6 E10 ALA C 100 MET C 105 -1 O LEU C 104 N LEU B 104 SHEET 7 E10 VAL C 109 LYS C 115 -1 O VAL C 109 N MET C 105 SHEET 8 E10 GLY C 79 PHE C 90 -1 N PHE C 89 O VAL C 110 SHEET 9 E10 THR C 119 LYS C 124 -1 O LEU C 121 N GLY C 79 SHEET 10 E10 THR C 9 GLU C 13 1 N LYS C 12 O THR C 122 SHEET 1 F10 GLN B 47 SER B 48 0 SHEET 2 F10 ASP B 33 LYS B 40 -1 N ARG B 38 O GLN B 47 SHEET 3 F10 GLY B 79 PHE B 90 -1 O PHE B 86 N ASP B 33 SHEET 4 F10 VAL B 109 LYS B 115 -1 O VAL B 110 N PHE B 89 SHEET 5 F10 ALA B 100 MET B 105 -1 N ILE B 102 O ILE B 111 SHEET 6 F10 ALA C 100 MET C 105 -1 O LEU C 104 N LEU B 104 SHEET 7 F10 VAL C 109 LYS C 115 -1 O VAL C 109 N MET C 105 SHEET 8 F10 GLY C 79 PHE C 90 -1 N PHE C 89 O VAL C 110 SHEET 9 F10 ASP C 33 LYS C 40 -1 N ASP C 33 O PHE C 86 SHEET 10 F10 GLU C 46 SER C 48 -1 O GLN C 47 N ARG C 38 SHEET 1 G 4 TRP C 2 THR C 6 0 SHEET 2 G 4 LEU C 18 ARG C 25 -1 O ARG C 25 N TRP C 2 SHEET 3 G 4 SER C 65 ILE C 70 -1 O ILE C 70 N LEU C 18 SHEET 4 G 4 TYR C 55 ASN C 60 -1 N ASN C 60 O SER C 65 SHEET 1 H 4 TRP D 2 THR D 6 0 SHEET 2 H 4 LEU D 18 ARG D 25 -1 O VAL D 23 N ASP D 4 SHEET 3 H 4 SER D 65 ILE D 70 -1 O PHE D 66 N CYS D 22 SHEET 4 H 4 TYR D 55 ASN D 60 -1 N THR D 58 O SER D 67 SSBOND 1 CYS A 22 CYS A 83 1555 1555 2.04 SSBOND 2 CYS B 22 CYS B 83 1555 1555 2.04 SSBOND 3 CYS C 22 CYS C 83 1555 1555 2.03 SSBOND 4 CYS D 22 CYS D 83 1555 1555 2.03 CISPEP 1 THR A 6 PRO A 7 0 -3.37 CISPEP 2 THR B 6 PRO B 7 0 -1.91 CISPEP 3 THR C 6 PRO C 7 0 -1.25 CISPEP 4 THR D 6 PRO D 7 0 -3.75 CRYST1 79.653 79.653 85.457 90.00 90.00 120.00 P 32 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012554 0.007248 0.000000 0.00000 SCALE2 0.000000 0.014497 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011702 0.00000