PDB Short entry for 3MQI HEADER TRANSCRIPTION ACTIVATOR 28-APR-10 3MQI TITLE HUMAN EARLY B-CELL FACTOR 1 (EBF1) IPT/TIG DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION FACTOR COE1; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: IPT/TIG DOMAIN (UNP RESIDUES 258-351); COMPND 5 SYNONYM: O/E-1, OE-1, EARLY B-CELL FACTOR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: COE1, EBF, EBF1, EBF1A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PRARE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4 KEYWDS IMMUNOGLOBULIN LIKE FOLD, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, TRANSCRIPTION ACTIVATOR EXPDTA X-RAY DIFFRACTION AUTHOR M.I.SIPONEN,L.LEHTIO,C.H.ARROWSMITH,C.BOUNTRA,R.COLLINS,A.M.EDWARDS, AUTHOR 2 S.FLODIN,A.FLORES,S.GRASLUND,M.HAMMARSTROM,I.JOHANSSON,T.KARLBERG, AUTHOR 3 T.KOTENYOVA,M.MOCHE,P.NORDLUND,T.NYMAN,C.PERSSON,H.SCHUELER, AUTHOR 4 P.SCHUTZ,L.SVENSSON,A.G.THORSELL,L.TRESAUGUES,S.VAN DEN BERG, AUTHOR 5 E.WAHLBERG,J.WEIGELT,M.WELIN,M.WISNIEWSKA,H.BERGLUND,STRUCTURAL AUTHOR 6 GENOMICS CONSORTIUM (SGC) REVDAT 4 01-SEP-10 3MQI 1 JRNL REVDAT 3 11-AUG-10 3MQI 1 FORMUL HETNAM REVDAT 2 14-JUL-10 3MQI 1 JRNL REVDAT 1 26-MAY-10 3MQI 0 JRNL AUTH M.I.SIPONEN,M.WISNIEWSKA,L.LEHTIO,I.JOHANSSON,L.SVENSSON, JRNL AUTH 2 G.RASZEWSKI,L.NILSSON,M.SIGVARDSSON,H.BERGLUND JRNL TITL STRUCTURAL DETERMINATION OF FUNCTIONAL DOMAINS IN EARLY JRNL TITL 2 B-CELL FACTOR (EBF) FAMILY OF TRANSCRIPTION FACTORS REVEALS JRNL TITL 3 SIMILARITIES TO REL DNA-BINDING PROTEINS AND A NOVEL JRNL TITL 4 DIMERIZATION MOTIF. JRNL REF J.BIOL.CHEM. V. 285 25875 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20592035 JRNL DOI 10.1074/JBC.C110.150482 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 13970 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 741 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1023 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 54 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2055 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 76 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.96000 REMARK 3 B22 (A**2) : -1.77000 REMARK 3 B33 (A**2) : 0.83000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.19000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.253 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2129 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1426 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2898 ; 1.151 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3495 ; 4.227 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 266 ; 5.617 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 72 ;37.202 ;22.778 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 327 ;15.788 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;22.447 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 339 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2299 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 424 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1336 ; 0.559 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 541 ; 0.000 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2189 ; 1.129 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 793 ; 1.541 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 709 ; 2.673 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MQI COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-10. REMARK 100 THE RCSB ID CODE IS RCSB058873. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00764 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14710 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 28.530 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 13.5 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : 0.09500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 13.2 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.72600 REMARK 200 R SYM FOR SHELL (I) : 0.72600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.720 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS, 23% PEG MME, 0.3M REMARK 280 TRIMETHYLAMINE N-OXIDE, PH 9, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.14550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.53650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.14550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.53650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 256 REMARK 465 MET A 257 REMARK 465 GLU A 258 REMARK 465 GLU A 349 REMARK 465 PRO A 350 REMARK 465 THR A 351 REMARK 465 SER B 256 REMARK 465 MET B 257 REMARK 465 GLU B 258 REMARK 465 GLU B 349 REMARK 465 PRO B 350 REMARK 465 THR B 351 REMARK 465 SER C 256 REMARK 465 MET C 257 REMARK 465 GLU C 258 REMARK 465 ASN C 348 REMARK 465 GLU C 349 REMARK 465 PRO C 350 REMARK 465 THR C 351 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS B 259 CG ND1 CD2 CE1 NE2 REMARK 470 HIS C 259 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 297 -10.70 78.20 REMARK 500 PRO A 307 3.56 -69.69 REMARK 500 HIS A 318 -47.64 -28.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EMC C 3 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 335 SG REMARK 620 2 EMC C 3 C1 167.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EMC A 1 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 335 SG REMARK 620 2 EMC A 1 C1 93.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EMC C 6 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 263 SG REMARK 620 2 EMC C 6 C1 89.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EMC B 4 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 263 SG REMARK 620 2 EMC B 4 C1 85.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 EMC B 5 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 335 SG REMARK 620 2 EMC B 5 C1 112.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EMC A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EMC A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EMC B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EMC B 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EMC C 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EMC C 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TMO C 0 DBREF 3MQI A 258 351 UNP Q9UH73 COE1_HUMAN 258 351 DBREF 3MQI B 258 351 UNP Q9UH73 COE1_HUMAN 258 351 DBREF 3MQI C 258 351 UNP Q9UH73 COE1_HUMAN 258 351 SEQADV 3MQI SER A 256 UNP Q9UH73 EXPRESSION TAG SEQADV 3MQI MET A 257 UNP Q9UH73 EXPRESSION TAG SEQADV 3MQI SER B 256 UNP Q9UH73 EXPRESSION TAG SEQADV 3MQI MET B 257 UNP Q9UH73 EXPRESSION TAG SEQADV 3MQI SER C 256 UNP Q9UH73 EXPRESSION TAG SEQADV 3MQI MET C 257 UNP Q9UH73 EXPRESSION TAG SEQRES 1 A 96 SER MET GLU HIS ALA THR PRO CYS ILE LYS ALA ILE SER SEQRES 2 A 96 PRO SER GLU GLY TRP THR THR GLY GLY ALA THR VAL ILE SEQRES 3 A 96 ILE ILE GLY ASP ASN PHE PHE ASP GLY LEU GLN VAL ILE SEQRES 4 A 96 PHE GLY THR MET LEU VAL TRP SER GLU LEU ILE THR PRO SEQRES 5 A 96 HIS ALA ILE ARG VAL GLN THR PRO PRO ARG HIS ILE PRO SEQRES 6 A 96 GLY VAL VAL GLU VAL THR LEU SER TYR LYS SER LYS GLN SEQRES 7 A 96 PHE CYS LYS GLY THR PRO GLY ARG PHE ILE TYR THR ALA SEQRES 8 A 96 LEU ASN GLU PRO THR SEQRES 1 B 96 SER MET GLU HIS ALA THR PRO CYS ILE LYS ALA ILE SER SEQRES 2 B 96 PRO SER GLU GLY TRP THR THR GLY GLY ALA THR VAL ILE SEQRES 3 B 96 ILE ILE GLY ASP ASN PHE PHE ASP GLY LEU GLN VAL ILE SEQRES 4 B 96 PHE GLY THR MET LEU VAL TRP SER GLU LEU ILE THR PRO SEQRES 5 B 96 HIS ALA ILE ARG VAL GLN THR PRO PRO ARG HIS ILE PRO SEQRES 6 B 96 GLY VAL VAL GLU VAL THR LEU SER TYR LYS SER LYS GLN SEQRES 7 B 96 PHE CYS LYS GLY THR PRO GLY ARG PHE ILE TYR THR ALA SEQRES 8 B 96 LEU ASN GLU PRO THR SEQRES 1 C 96 SER MET GLU HIS ALA THR PRO CYS ILE LYS ALA ILE SER SEQRES 2 C 96 PRO SER GLU GLY TRP THR THR GLY GLY ALA THR VAL ILE SEQRES 3 C 96 ILE ILE GLY ASP ASN PHE PHE ASP GLY LEU GLN VAL ILE SEQRES 4 C 96 PHE GLY THR MET LEU VAL TRP SER GLU LEU ILE THR PRO SEQRES 5 C 96 HIS ALA ILE ARG VAL GLN THR PRO PRO ARG HIS ILE PRO SEQRES 6 C 96 GLY VAL VAL GLU VAL THR LEU SER TYR LYS SER LYS GLN SEQRES 7 C 96 PHE CYS LYS GLY THR PRO GLY ARG PHE ILE TYR THR ALA SEQRES 8 C 96 LEU ASN GLU PRO THR HET EMC A 1 3 HET EMC A 2 3 HET EMC B 4 3 HET EMC B 5 3 HET EMC C 3 3 HET EMC C 6 3 HET TMO C 0 5 HETNAM EMC ETHYL MERCURY ION HETNAM TMO TRIMETHYLAMINE OXIDE FORMUL 4 EMC 6(C2 H5 HG 1+) FORMUL 10 TMO C3 H9 N O FORMUL 11 HOH *76(H2 O) SHEET 1 A 4 CYS A 263 SER A 268 0 SHEET 2 A 4 THR A 279 ASP A 285 -1 O ILE A 283 N LYS A 265 SHEET 3 A 4 ALA A 309 GLN A 313 -1 O VAL A 312 N VAL A 280 SHEET 4 A 4 SER A 302 THR A 306 -1 N ILE A 305 O ALA A 309 SHEET 1 B 5 GLU A 271 TRP A 273 0 SHEET 2 B 5 GLY A 340 THR A 345 1 O THR A 345 N GLY A 272 SHEET 3 B 5 GLY A 321 TYR A 329 -1 N VAL A 325 O GLY A 340 SHEET 4 B 5 GLN A 292 PHE A 295 -1 N ILE A 294 O THR A 326 SHEET 5 B 5 MET A 298 VAL A 300 -1 O MET A 298 N PHE A 295 SHEET 1 C 4 GLU A 271 TRP A 273 0 SHEET 2 C 4 GLY A 340 THR A 345 1 O THR A 345 N GLY A 272 SHEET 3 C 4 GLY A 321 TYR A 329 -1 N VAL A 325 O GLY A 340 SHEET 4 C 4 LYS A 332 GLN A 333 -1 O LYS A 332 N TYR A 329 SHEET 1 D 4 CYS B 263 SER B 268 0 SHEET 2 D 4 THR B 279 ASP B 285 -1 O ILE B 283 N LYS B 265 SHEET 3 D 4 ALA B 309 GLN B 313 -1 O VAL B 312 N VAL B 280 SHEET 4 D 4 GLU B 303 THR B 306 -1 N ILE B 305 O ALA B 309 SHEET 1 E 5 GLU B 271 TRP B 273 0 SHEET 2 E 5 GLY B 340 THR B 345 1 O THR B 345 N GLY B 272 SHEET 3 E 5 GLY B 321 TYR B 329 -1 N VAL B 323 O PHE B 342 SHEET 4 E 5 GLN B 292 PHE B 295 -1 N ILE B 294 O THR B 326 SHEET 5 E 5 MET B 298 TRP B 301 -1 O MET B 298 N PHE B 295 SHEET 1 F 4 GLU B 271 TRP B 273 0 SHEET 2 F 4 GLY B 340 THR B 345 1 O THR B 345 N GLY B 272 SHEET 3 F 4 GLY B 321 TYR B 329 -1 N VAL B 323 O PHE B 342 SHEET 4 F 4 LYS B 332 GLN B 333 -1 O LYS B 332 N TYR B 329 SHEET 1 G 4 CYS C 263 SER C 268 0 SHEET 2 G 4 THR C 279 ASP C 285 -1 O ILE C 281 N SER C 268 SHEET 3 G 4 ALA C 309 GLN C 313 -1 O VAL C 312 N VAL C 280 SHEET 4 G 4 GLU C 303 THR C 306 -1 N ILE C 305 O ALA C 309 SHEET 1 H 5 GLU C 271 TRP C 273 0 SHEET 2 H 5 GLY C 340 THR C 345 1 O THR C 345 N GLY C 272 SHEET 3 H 5 GLY C 321 TYR C 329 -1 N VAL C 323 O PHE C 342 SHEET 4 H 5 GLN C 292 PHE C 295 -1 N ILE C 294 O THR C 326 SHEET 5 H 5 MET C 298 TRP C 301 -1 O MET C 298 N PHE C 295 SHEET 1 I 4 GLU C 271 TRP C 273 0 SHEET 2 I 4 GLY C 340 THR C 345 1 O THR C 345 N GLY C 272 SHEET 3 I 4 GLY C 321 TYR C 329 -1 N VAL C 323 O PHE C 342 SHEET 4 I 4 LYS C 332 GLN C 333 -1 O LYS C 332 N TYR C 329 LINK SG CYS C 335 HG EMC C 3 1555 1555 2.35 LINK SG CYS A 335 HG EMC A 1 1555 1555 2.55 LINK SG CYS C 263 HG EMC C 6 1555 1555 2.56 LINK SG CYS B 263 HG EMC B 4 1555 1555 2.67 LINK SG CYS B 335 HG EMC B 5 1555 1555 2.82 CISPEP 1 SER A 268 PRO A 269 0 -4.19 CISPEP 2 SER B 268 PRO B 269 0 -1.85 CISPEP 3 SER C 268 PRO C 269 0 0.69 SITE 1 AC1 3 GLY A 277 PHE A 334 CYS A 335 SITE 1 AC2 2 CYS A 263 ASP A 285 SITE 1 AC3 3 CYS B 263 ASP B 285 LYS B 336 SITE 1 AC4 2 CYS B 335 GLY B 337 SITE 1 AC5 2 CYS C 335 GLY C 337 SITE 1 AC6 2 CYS C 263 LYS C 336 SITE 1 AC7 1 HOH B 45 CRYST1 86.291 57.073 69.140 90.00 93.17 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011589 0.000000 0.000641 0.00000 SCALE2 0.000000 0.017521 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014486 0.00000