PDB Short entry for 3N5U HEADER HYDROLASE, TRANSCRIPTION REGULATION 25-MAY-10 3N5U TITLE CRYSTAL STRUCTURE OF AN RB C-TERMINAL PEPTIDE BOUND TO THE CATALYTIC TITLE 2 SUBUNIT OF PP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-ALPHA CATALYTIC COMPND 3 SUBUNIT; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP RESIDUES 1-300; COMPND 6 SYNONYM: PP-1A; COMPND 7 EC: 3.1.3.16; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: RETINOBLASTOMA-ASSOCIATED PROTEIN; COMPND 11 CHAIN: C; COMPND 12 FRAGMENT: UNP RESIDUES 870-882; COMPND 13 SYNONYM: PRB, RB, PP110, P105-RB; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPP1A, PPP1CA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFLAG-CTS; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 OTHER_DETAILS: SYNTHETIC 13-MER PEPTIDE KEYWDS RETINOBLASTOMA, PRB, RB, PROTEIN PHOSPHATASE-1, PP1, PHOSPHATASE, KEYWDS 2 HYDROLASE, TRANSCRIPTION REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR A.M.HIRSCHI,M.CECCHINI,R.C.STEINHARDT,F.A.DICK,S.M.RUBIN REVDAT 4 21-FEB-24 3N5U 1 REMARK LINK REVDAT 3 27-OCT-10 3N5U 1 MTRIX1 REVDAT 2 15-SEP-10 3N5U 1 JRNL REVDAT 1 11-AUG-10 3N5U 0 JRNL AUTH A.HIRSCHI,M.CECCHINI,R.C.STEINHARDT,M.R.SCHAMBER,F.A.DICK, JRNL AUTH 2 S.M.RUBIN JRNL TITL AN OVERLAPPING KINASE AND PHOSPHATASE DOCKING SITE REGULATES JRNL TITL 2 ACTIVITY OF THE RETINOBLASTOMA PROTEIN. JRNL REF NAT.STRUCT.MOL.BIOL. V. 17 1051 2010 JRNL REFN ISSN 1545-9993 JRNL PMID 20694007 JRNL DOI 10.1038/NSMB.1868 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 83.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 13588 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1358 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 83.7190 - 6.8930 0.97 1413 140 0.1940 0.2040 REMARK 3 2 6.8930 - 5.4720 0.96 1288 145 0.2220 0.2830 REMARK 3 3 5.4720 - 4.7800 0.95 1286 126 0.2130 0.2490 REMARK 3 4 4.7800 - 4.3430 0.96 1251 136 0.1950 0.2450 REMARK 3 5 4.3430 - 4.0320 0.95 1207 157 0.1990 0.2370 REMARK 3 6 4.0320 - 3.7940 0.93 1218 134 0.2230 0.2830 REMARK 3 7 3.7940 - 3.6040 0.93 1210 128 0.2460 0.2820 REMARK 3 8 3.6040 - 3.4470 0.91 1131 137 0.2440 0.2740 REMARK 3 9 3.4470 - 3.3140 0.90 1153 132 0.2580 0.2970 REMARK 3 10 3.3140 - 3.2000 0.85 1073 123 0.2750 0.3120 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 20.56 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 2.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 16.06200 REMARK 3 B22 (A**2) : 16.06200 REMARK 3 B33 (A**2) : -32.12300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4900 REMARK 3 ANGLE : 0.789 6616 REMARK 3 CHIRALITY : 0.058 709 REMARK 3 PLANARITY : 0.003 863 REMARK 3 DIHEDRAL : 14.918 1809 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 7:300 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 7:300 ) REMARK 3 ATOM PAIRS NUMBER : 2364 REMARK 3 RMSD : 0.015 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3N5U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059417. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : ASSYMETRIC CURVED CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13588 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 83.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES, 200MM MGCL2, 18% PEG REMARK 280 4000, PH 7.5, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 96.19050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 46.47300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 46.47300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 48.09525 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 46.47300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 46.47300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 144.28575 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 46.47300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.47300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 48.09525 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 46.47300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.47300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 144.28575 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 96.19050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 LYS A 6 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 465 SER B 4 REMARK 465 GLU B 5 REMARK 465 LYS B 6 REMARK 465 LYS C 870 REMARK 465 PRO C 871 REMARK 465 LEU C 872 REMARK 465 GLU C 880 REMARK 465 GLY C 881 REMARK 465 SER C 882 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE C 877 CB - CA - C ANGL. DEV. = -18.1 DEGREES REMARK 500 ASP C 878 N - CA - CB ANGL. DEV. = -12.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 20 104.87 -53.76 REMARK 500 SER A 22 56.51 -148.64 REMARK 500 ARG A 23 146.70 75.31 REMARK 500 HIS A 66 59.80 38.46 REMARK 500 ASP A 95 144.83 83.45 REMARK 500 ARG A 96 -52.35 69.62 REMARK 500 GLU A 126 59.76 -93.24 REMARK 500 TYR A 144 -107.03 -131.66 REMARK 500 ASN A 157 -6.14 -58.71 REMARK 500 SER A 224 -162.33 59.98 REMARK 500 ALA A 247 -117.98 -122.24 REMARK 500 HIS A 248 -26.83 74.89 REMARK 500 TYR A 272 -34.56 -32.44 REMARK 500 CYS A 273 19.86 -149.67 REMARK 500 PHE A 276 -34.54 -141.82 REMARK 500 ASP A 277 17.87 59.18 REMARK 500 LEU A 289 36.20 71.34 REMARK 500 PRO A 298 -104.42 -76.10 REMARK 500 ALA A 299 123.65 -174.72 REMARK 500 GLN B 20 104.84 -54.24 REMARK 500 SER B 22 56.75 -148.97 REMARK 500 ARG B 23 146.81 75.77 REMARK 500 LEU B 59 147.97 -170.15 REMARK 500 HIS B 66 59.72 38.98 REMARK 500 ASP B 95 144.66 83.04 REMARK 500 ARG B 96 -51.95 68.83 REMARK 500 GLU B 126 59.43 -93.56 REMARK 500 TYR B 144 -107.56 -131.42 REMARK 500 ASN B 157 -6.84 -58.54 REMARK 500 SER B 224 -162.64 60.07 REMARK 500 ALA B 247 -117.92 -121.11 REMARK 500 HIS B 248 -27.26 75.29 REMARK 500 TYR B 272 -33.93 -33.09 REMARK 500 CYS B 273 20.42 -149.71 REMARK 500 PHE B 276 -34.18 -141.94 REMARK 500 ASP B 277 17.77 58.93 REMARK 500 LEU B 289 36.28 71.02 REMARK 500 PRO B 298 -104.34 -75.81 REMARK 500 ALA B 299 122.92 -175.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 1 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MN A 2 MN REMARK 620 2 ASP A 64 OD2 87.3 REMARK 620 3 HIS A 66 NE2 119.8 89.3 REMARK 620 4 ASP A 92 OD2 47.9 70.8 74.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 2 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD2 REMARK 620 2 ASN A 124 OD1 100.5 REMARK 620 3 HIS A 173 NE2 81.8 64.3 REMARK 620 4 HIS A 248 ND1 153.8 76.6 73.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 3 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MN B 4 MN REMARK 620 2 ASP B 64 OD2 90.1 REMARK 620 3 HIS B 66 NE2 118.1 89.7 REMARK 620 4 ASP B 92 OD2 48.3 72.0 73.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 4 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 92 OD2 REMARK 620 2 ASN B 124 OD1 101.2 REMARK 620 3 HIS B 173 NE2 81.0 64.5 REMARK 620 4 HIS B 248 ND1 152.1 77.2 73.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 2 DBREF 3N5U A 1 300 UNP P62136 PP1A_HUMAN 1 300 DBREF 3N5U B 1 300 UNP P62136 PP1A_HUMAN 1 300 DBREF 3N5U C 870 882 UNP P06400 RB_HUMAN 870 882 SEQRES 1 A 300 MET SER ASP SER GLU LYS LEU ASN LEU ASP SER ILE ILE SEQRES 2 A 300 GLY ARG LEU LEU GLU VAL GLN GLY SER ARG PRO GLY LYS SEQRES 3 A 300 ASN VAL GLN LEU THR GLU ASN GLU ILE ARG GLY LEU CYS SEQRES 4 A 300 LEU LYS SER ARG GLU ILE PHE LEU SER GLN PRO ILE LEU SEQRES 5 A 300 LEU GLU LEU GLU ALA PRO LEU LYS ILE CYS GLY ASP ILE SEQRES 6 A 300 HIS GLY GLN TYR TYR ASP LEU LEU ARG LEU PHE GLU TYR SEQRES 7 A 300 GLY GLY PHE PRO PRO GLU SER ASN TYR LEU PHE LEU GLY SEQRES 8 A 300 ASP TYR VAL ASP ARG GLY LYS GLN SER LEU GLU THR ILE SEQRES 9 A 300 CYS LEU LEU LEU ALA TYR LYS ILE LYS TYR PRO GLU ASN SEQRES 10 A 300 PHE PHE LEU LEU ARG GLY ASN HIS GLU CYS ALA SER ILE SEQRES 11 A 300 ASN ARG ILE TYR GLY PHE TYR ASP GLU CYS LYS ARG ARG SEQRES 12 A 300 TYR ASN ILE LYS LEU TRP LYS THR PHE THR ASP CYS PHE SEQRES 13 A 300 ASN CYS LEU PRO ILE ALA ALA ILE VAL ASP GLU LYS ILE SEQRES 14 A 300 PHE CYS CYS HIS GLY GLY LEU SER PRO ASP LEU GLN SER SEQRES 15 A 300 MET GLU GLN ILE ARG ARG ILE MET ARG PRO THR ASP VAL SEQRES 16 A 300 PRO ASP GLN GLY LEU LEU CYS ASP LEU LEU TRP SER ASP SEQRES 17 A 300 PRO ASP LYS ASP VAL GLN GLY TRP GLY GLU ASN ASP ARG SEQRES 18 A 300 GLY VAL SER PHE THR PHE GLY ALA GLU VAL VAL ALA LYS SEQRES 19 A 300 PHE LEU HIS LYS HIS ASP LEU ASP LEU ILE CYS ARG ALA SEQRES 20 A 300 HIS GLN VAL VAL GLU ASP GLY TYR GLU PHE PHE ALA LYS SEQRES 21 A 300 ARG GLN LEU VAL THR LEU PHE SER ALA PRO ASN TYR CYS SEQRES 22 A 300 GLY GLU PHE ASP ASN ALA GLY ALA MET MET SER VAL ASP SEQRES 23 A 300 GLU THR LEU MET CYS SER PHE GLN ILE LEU LYS PRO ALA SEQRES 24 A 300 ASP SEQRES 1 B 300 MET SER ASP SER GLU LYS LEU ASN LEU ASP SER ILE ILE SEQRES 2 B 300 GLY ARG LEU LEU GLU VAL GLN GLY SER ARG PRO GLY LYS SEQRES 3 B 300 ASN VAL GLN LEU THR GLU ASN GLU ILE ARG GLY LEU CYS SEQRES 4 B 300 LEU LYS SER ARG GLU ILE PHE LEU SER GLN PRO ILE LEU SEQRES 5 B 300 LEU GLU LEU GLU ALA PRO LEU LYS ILE CYS GLY ASP ILE SEQRES 6 B 300 HIS GLY GLN TYR TYR ASP LEU LEU ARG LEU PHE GLU TYR SEQRES 7 B 300 GLY GLY PHE PRO PRO GLU SER ASN TYR LEU PHE LEU GLY SEQRES 8 B 300 ASP TYR VAL ASP ARG GLY LYS GLN SER LEU GLU THR ILE SEQRES 9 B 300 CYS LEU LEU LEU ALA TYR LYS ILE LYS TYR PRO GLU ASN SEQRES 10 B 300 PHE PHE LEU LEU ARG GLY ASN HIS GLU CYS ALA SER ILE SEQRES 11 B 300 ASN ARG ILE TYR GLY PHE TYR ASP GLU CYS LYS ARG ARG SEQRES 12 B 300 TYR ASN ILE LYS LEU TRP LYS THR PHE THR ASP CYS PHE SEQRES 13 B 300 ASN CYS LEU PRO ILE ALA ALA ILE VAL ASP GLU LYS ILE SEQRES 14 B 300 PHE CYS CYS HIS GLY GLY LEU SER PRO ASP LEU GLN SER SEQRES 15 B 300 MET GLU GLN ILE ARG ARG ILE MET ARG PRO THR ASP VAL SEQRES 16 B 300 PRO ASP GLN GLY LEU LEU CYS ASP LEU LEU TRP SER ASP SEQRES 17 B 300 PRO ASP LYS ASP VAL GLN GLY TRP GLY GLU ASN ASP ARG SEQRES 18 B 300 GLY VAL SER PHE THR PHE GLY ALA GLU VAL VAL ALA LYS SEQRES 19 B 300 PHE LEU HIS LYS HIS ASP LEU ASP LEU ILE CYS ARG ALA SEQRES 20 B 300 HIS GLN VAL VAL GLU ASP GLY TYR GLU PHE PHE ALA LYS SEQRES 21 B 300 ARG GLN LEU VAL THR LEU PHE SER ALA PRO ASN TYR CYS SEQRES 22 B 300 GLY GLU PHE ASP ASN ALA GLY ALA MET MET SER VAL ASP SEQRES 23 B 300 GLU THR LEU MET CYS SER PHE GLN ILE LEU LYS PRO ALA SEQRES 24 B 300 ASP SEQRES 1 C 13 LYS PRO LEU LYS LYS LEU ARG PHE ASP ILE GLU GLY SER HET MN A 1 1 HET MN A 2 1 HET CL A 301 1 HET MN B 3 1 HET MN B 4 1 HET CL B 2 1 HETNAM MN MANGANESE (II) ION HETNAM CL CHLORIDE ION FORMUL 4 MN 4(MN 2+) FORMUL 6 CL 2(CL 1-) HELIX 1 1 ASN A 8 GLU A 18 1 11 HELIX 2 2 THR A 31 GLN A 49 1 19 HELIX 3 3 GLN A 68 GLY A 80 1 13 HELIX 4 4 GLN A 99 TYR A 114 1 16 HELIX 5 5 CYS A 127 ARG A 132 1 6 HELIX 6 6 GLY A 135 TYR A 144 1 10 HELIX 7 7 ASN A 145 ASN A 157 1 13 HELIX 8 8 SER A 182 ARG A 188 1 7 HELIX 9 9 GLN A 198 SER A 207 1 10 HELIX 10 10 GLY A 228 HIS A 239 1 12 HELIX 11 11 ASN B 8 GLU B 18 1 11 HELIX 12 12 THR B 31 GLN B 49 1 19 HELIX 13 13 GLN B 68 GLY B 80 1 13 HELIX 14 14 GLN B 99 TYR B 114 1 16 HELIX 15 15 CYS B 127 ARG B 132 1 6 HELIX 16 16 GLY B 135 TYR B 144 1 10 HELIX 17 17 ASN B 145 ASN B 157 1 13 HELIX 18 18 SER B 182 ARG B 188 1 7 HELIX 19 19 GLN B 198 SER B 207 1 10 HELIX 20 20 GLY B 228 HIS B 239 1 12 SHEET 1 A 6 LEU A 52 LEU A 53 0 SHEET 2 A 6 ALA A 162 VAL A 165 1 O ALA A 162 N LEU A 53 SHEET 3 A 6 ILE A 169 CYS A 171 -1 O CYS A 171 N ALA A 163 SHEET 4 A 6 LEU A 243 ARG A 246 1 O LEU A 243 N PHE A 170 SHEET 5 A 6 LEU A 263 LEU A 266 1 O LEU A 266 N ARG A 246 SHEET 6 A 6 TYR A 255 PHE A 258 -1 N GLU A 256 O THR A 265 SHEET 1 B 6 PHE A 118 LEU A 120 0 SHEET 2 B 6 TYR A 87 PHE A 89 1 N TYR A 87 O PHE A 119 SHEET 3 B 6 LEU A 59 CYS A 62 1 N CYS A 62 O LEU A 88 SHEET 4 B 6 GLY A 280 VAL A 285 -1 O MET A 283 N ILE A 61 SHEET 5 B 6 MET A 290 LEU A 296 -1 O LEU A 296 N GLY A 280 SHEET 6 B 6 ARG C 876 PHE C 877 1 O ARG C 876 N CYS A 291 SHEET 1 C 3 ASP A 208 PRO A 209 0 SHEET 2 C 3 PHE A 225 PHE A 227 1 O PHE A 227 N ASP A 208 SHEET 3 C 3 TRP A 216 GLU A 218 -1 N GLY A 217 O THR A 226 SHEET 1 D 6 LEU B 52 LEU B 53 0 SHEET 2 D 6 ALA B 162 VAL B 165 1 O ALA B 162 N LEU B 53 SHEET 3 D 6 ILE B 169 CYS B 171 -1 O CYS B 171 N ALA B 163 SHEET 4 D 6 LEU B 243 ARG B 246 1 O LEU B 243 N PHE B 170 SHEET 5 D 6 LEU B 263 LEU B 266 1 O LEU B 266 N ARG B 246 SHEET 6 D 6 TYR B 255 PHE B 258 -1 N GLU B 256 O THR B 265 SHEET 1 E 5 PHE B 118 LEU B 120 0 SHEET 2 E 5 TYR B 87 PHE B 89 1 N TYR B 87 O PHE B 119 SHEET 3 E 5 LEU B 59 CYS B 62 1 N CYS B 62 O LEU B 88 SHEET 4 E 5 GLY B 280 VAL B 285 -1 O MET B 283 N ILE B 61 SHEET 5 E 5 CYS B 291 LEU B 296 -1 O LEU B 296 N GLY B 280 SHEET 1 F 3 ASP B 208 PRO B 209 0 SHEET 2 F 3 PHE B 225 PHE B 227 1 O PHE B 227 N ASP B 208 SHEET 3 F 3 TRP B 216 GLU B 218 -1 N GLY B 217 O THR B 226 LINK MN MN A 1 MN MN A 2 1555 1555 2.96 LINK MN MN A 1 OD2 ASP A 64 1555 1555 2.29 LINK MN MN A 1 NE2 HIS A 66 1555 1555 2.27 LINK MN MN A 1 OD2 ASP A 92 1555 1555 2.34 LINK MN MN A 2 OD2 ASP A 92 1555 1555 2.22 LINK MN MN A 2 OD1 ASN A 124 1555 1555 2.37 LINK MN MN A 2 NE2 HIS A 173 1555 1555 2.42 LINK MN MN A 2 ND1 HIS A 248 1555 1555 2.30 LINK MN MN B 3 MN MN B 4 1555 1555 2.92 LINK MN MN B 3 OD2 ASP B 64 1555 1555 2.22 LINK MN MN B 3 NE2 HIS B 66 1555 1555 2.36 LINK MN MN B 3 OD2 ASP B 92 1555 1555 2.34 LINK MN MN B 4 OD2 ASP B 92 1555 1555 2.22 LINK MN MN B 4 OD1 ASN B 124 1555 1555 2.34 LINK MN MN B 4 NE2 HIS B 173 1555 1555 2.44 LINK MN MN B 4 ND1 HIS B 248 1555 1555 2.32 CISPEP 1 ALA A 57 PRO A 58 0 0.64 CISPEP 2 PRO A 82 PRO A 83 0 -0.15 CISPEP 3 ARG A 191 PRO A 192 0 2.06 CISPEP 4 ALA B 57 PRO B 58 0 0.04 CISPEP 5 PRO B 82 PRO B 83 0 -0.49 CISPEP 6 ARG B 191 PRO B 192 0 1.64 SITE 1 AC1 6 MN A 2 ASP A 64 HIS A 66 ASP A 92 SITE 2 AC1 6 TYR A 272 CL A 301 SITE 1 AC2 7 MN A 1 ASP A 64 ASP A 92 ASN A 124 SITE 2 AC2 7 HIS A 173 HIS A 248 CL A 301 SITE 1 AC3 6 CL B 2 MN B 4 ASP B 64 HIS B 66 SITE 2 AC3 6 ASP B 92 TYR B 272 SITE 1 AC4 7 CL B 2 MN B 3 ASP B 64 ASP B 92 SITE 2 AC4 7 ASN B 124 HIS B 173 HIS B 248 SITE 1 AC5 5 MN A 1 MN A 2 ARG A 96 HIS A 125 SITE 2 AC5 5 ARG A 221 SITE 1 AC6 6 MN B 3 MN B 4 ARG B 96 ASN B 124 SITE 2 AC6 6 HIS B 125 ARG B 221 CRYST1 92.946 92.946 192.381 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010759 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010759 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005198 0.00000 MTRIX1 1 -0.386983 0.921948 -0.016028 65.74210 1 MTRIX2 1 0.921479 0.386038 -0.043035 -42.63000 1 MTRIX3 1 -0.033489 -0.031423 -0.998945 43.08720 1