PDB Short entry for 3N85 HEADER TRANSFERASE/IMMUNE SYSTEM 27-MAY-10 3N85 TITLE CRYSTALLOGRAPHIC TRIMER OF HER2 EXTRACELLULAR REGIONS IN COMPLEX WITH TITLE 2 TRYPTOPHAN-RICH ANTIBODY FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 23-646; COMPND 5 SYNONYM: P185ERBB2, PROTO-ONCOGENE C-ERBB-2, PROTO-ONCOGENE NEU, COMPND 6 TYROSINE KINASE-TYPE CELL SURFACE RECEPTOR HER2, METASTATIC LYMPH COMPND 7 NODE GENE 19 PROTEIN, MLN 19; COMPND 8 EC: 2.7.10.1; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: FAB37 LIGHT CHAIN; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: FAB37 HEAVY CHAIN; COMPND 16 CHAIN: H; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERBB2, HER2, MLN19, NEU, NGL; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 OTHER_DETAILS: LIGHT CHAIN (CHAIN ID L) WAS SELECTED FROM A SEQUENCE SOURCE 14 LIBRARY BASED ON A HUMAN KAPPA LIGHT CHAIN DISPLAYED ON PHAGE; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 20 OTHER_DETAILS: HEAVY CHAIN (CHAIN ID H) WAS SELECTED FROM A SEQUENCE SOURCE 21 LIBRARY BASED ON A HUMAN HEAVY CHAIN DISPLAYED ON PHAGE KEYWDS HER2, ERBB2, TRP/SER LIBRARY, PHAGE DISPLAY, TRANSFERASE-IMMUNE KEYWDS 2 SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.EIGENBROT REVDAT 7 06-SEP-23 3N85 1 HETSYN REVDAT 6 29-JUL-20 3N85 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 24-JAN-18 3N85 1 REMARK REVDAT 4 08-NOV-17 3N85 1 REMARK REVDAT 3 15-JAN-14 3N85 1 REMARK VERSN REVDAT 2 22-SEP-10 3N85 1 JRNL REVDAT 1 28-JUL-10 3N85 0 JRNL AUTH R.D.FISHER,M.ULTSCH,A.LINGEL,G.SCHAEFER,L.SHAO,S.BIRTALAN, JRNL AUTH 2 S.S.SIDHU,C.EIGENBROT JRNL TITL STRUCTURE OF THE COMPLEX BETWEEN HER2 AND AN ANTIBODY JRNL TITL 2 PARATOPE FORMED BY SIDE CHAINS FROM TRYPTOPHAN AND SERINE. JRNL REF J.MOL.BIOL. V. 402 217 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20654626 JRNL DOI 10.1016/J.JMB.2010.07.027 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 50562 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1636 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6442 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 226 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7920 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 169 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.23000 REMARK 3 B22 (A**2) : 4.23000 REMARK 3 B33 (A**2) : -6.35000 REMARK 3 B12 (A**2) : 2.12000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.452 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.302 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.217 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.369 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8336 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11392 ; 1.096 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1031 ; 5.755 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 350 ;35.728 ;24.171 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1282 ;15.513 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;15.628 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1255 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6271 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3208 ; 0.192 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5547 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 208 ; 0.105 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 69 ; 0.183 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.134 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5267 ; 1.849 ; 2.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8330 ; 3.192 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3478 ; 1.848 ; 2.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3062 ; 2.946 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 118 REMARK 3 RESIDUE RANGE : L 1 L 108 REMARK 3 RESIDUE RANGE : H 225 H 225 REMARK 3 RESIDUE RANGE : L 218 L 218 REMARK 3 RESIDUE RANGE : L 219 L 219 REMARK 3 ORIGIN FOR THE GROUP (A): 92.8434 -12.4902 -19.1268 REMARK 3 T TENSOR REMARK 3 T11: -0.0401 T22: -0.4501 REMARK 3 T33: -0.3033 T12: -0.0239 REMARK 3 T13: 0.0254 T23: 0.0980 REMARK 3 L TENSOR REMARK 3 L11: 1.0683 L22: 3.2305 REMARK 3 L33: 4.1291 L12: -1.2860 REMARK 3 L13: 0.1045 L23: 0.8119 REMARK 3 S TENSOR REMARK 3 S11: -0.1701 S12: -0.0560 S13: -0.0830 REMARK 3 S21: -0.0565 S22: 0.1504 S23: -0.0250 REMARK 3 S31: 0.5058 S32: 0.1952 S33: 0.0197 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 124 H 217 REMARK 3 RESIDUE RANGE : L 109 L 214 REMARK 3 ORIGIN FOR THE GROUP (A): 112.2239 -33.4437 -0.4987 REMARK 3 T TENSOR REMARK 3 T11: 0.3838 T22: 0.2447 REMARK 3 T33: 0.0274 T12: 0.3858 REMARK 3 T13: 0.0662 T23: -0.0293 REMARK 3 L TENSOR REMARK 3 L11: 2.2984 L22: 3.5275 REMARK 3 L33: 4.7826 L12: -1.5094 REMARK 3 L13: -1.1297 L23: 0.4075 REMARK 3 S TENSOR REMARK 3 S11: -0.0572 S12: -0.6855 S13: 0.1759 REMARK 3 S21: 0.5117 S22: 0.3175 S23: -0.5988 REMARK 3 S31: 0.0301 S32: 1.1673 S33: -0.2603 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 197 REMARK 3 RESIDUE RANGE : A 1165 A 1170 REMARK 3 RESIDUE RANGE : A 632 A 632 REMARK 3 RESIDUE RANGE : A 636 A 636 REMARK 3 RESIDUE RANGE : A 637 A 637 REMARK 3 ORIGIN FOR THE GROUP (A): 84.5963 24.1643 -66.1991 REMARK 3 T TENSOR REMARK 3 T11: -0.3030 T22: -0.5359 REMARK 3 T33: -0.4247 T12: -0.0400 REMARK 3 T13: -0.0516 T23: 0.0434 REMARK 3 L TENSOR REMARK 3 L11: 2.8060 L22: 5.0810 REMARK 3 L33: 6.3129 L12: 0.7829 REMARK 3 L13: -0.8795 L23: -1.1327 REMARK 3 S TENSOR REMARK 3 S11: -0.0083 S12: -0.0321 S13: -0.2888 REMARK 3 S21: 0.0689 S22: -0.0092 S23: -0.0725 REMARK 3 S31: 0.7632 S32: -0.2158 S33: 0.0175 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 198 A 245 REMARK 3 RESIDUE RANGE : A 1237 A 1239 REMARK 3 RESIDUE RANGE : A 628 A 628 REMARK 3 ORIGIN FOR THE GROUP (A): 75.2027 46.5024 -64.0774 REMARK 3 T TENSOR REMARK 3 T11: -0.3684 T22: -0.3640 REMARK 3 T33: -0.3399 T12: 0.0074 REMARK 3 T13: 0.0377 T23: 0.0713 REMARK 3 L TENSOR REMARK 3 L11: 3.6900 L22: 6.3180 REMARK 3 L33: 12.2530 L12: -3.5321 REMARK 3 L13: 2.2368 L23: -1.0253 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: -0.3356 S13: 0.0894 REMARK 3 S21: 0.8054 S22: 0.2165 S23: 0.3374 REMARK 3 S31: -0.3215 S32: -0.7454 S33: -0.1822 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 246 A 266 REMARK 3 ORIGIN FOR THE GROUP (A): 73.1777 58.0450 -46.1135 REMARK 3 T TENSOR REMARK 3 T11: 0.5167 T22: 0.7322 REMARK 3 T33: 0.5216 T12: 0.0282 REMARK 3 T13: -0.0203 T23: 0.1884 REMARK 3 L TENSOR REMARK 3 L11: 2.4303 L22: 40.1094 REMARK 3 L33: 10.8058 L12: -8.1435 REMARK 3 L13: -5.0992 L23: 15.9143 REMARK 3 S TENSOR REMARK 3 S11: 0.6825 S12: -0.8465 S13: 0.4582 REMARK 3 S21: -1.9760 S22: -0.6968 S23: 2.7983 REMARK 3 S31: 0.8395 S32: -1.5073 S33: 0.0144 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 267 A 319 REMARK 3 ORIGIN FOR THE GROUP (A): 84.7907 40.6825 -35.0298 REMARK 3 T TENSOR REMARK 3 T11: 0.4534 T22: 0.0848 REMARK 3 T33: 0.0850 T12: -0.0418 REMARK 3 T13: -0.0852 T23: 0.1350 REMARK 3 L TENSOR REMARK 3 L11: 4.5146 L22: 4.3615 REMARK 3 L33: 9.9103 L12: -2.7926 REMARK 3 L13: 1.9582 L23: -0.4953 REMARK 3 S TENSOR REMARK 3 S11: -0.4183 S12: -1.5003 S13: 0.6203 REMARK 3 S21: 1.1291 S22: 0.1192 S23: -0.6835 REMARK 3 S31: -1.0513 S32: 0.3040 S33: 0.2991 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 6 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 320 A 507 REMARK 3 RESIDUE RANGE : A 626 A 627 REMARK 3 RESIDUE RANGE : A 629 A 629 REMARK 3 RESIDUE RANGE : A 633 A 633 REMARK 3 RESIDUE RANGE : A 634 A 635 REMARK 3 RESIDUE RANGE : A 638 A 638 REMARK 3 ORIGIN FOR THE GROUP (A): 87.2039 14.4516 -32.0225 REMARK 3 T TENSOR REMARK 3 T11: -0.1976 T22: -0.4754 REMARK 3 T33: -0.4118 T12: -0.0609 REMARK 3 T13: -0.0784 T23: 0.0684 REMARK 3 L TENSOR REMARK 3 L11: 4.2013 L22: 5.9125 REMARK 3 L33: 5.1069 L12: 0.6910 REMARK 3 L13: 0.3703 L23: -1.4594 REMARK 3 S TENSOR REMARK 3 S11: -0.1383 S12: 0.1070 S13: 0.0890 REMARK 3 S21: -0.0331 S22: 0.0252 S23: -0.1852 REMARK 3 S31: -0.2178 S32: 0.0586 S33: 0.1131 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 508 A 620 REMARK 3 RESIDUE RANGE : A 630 A 630 REMARK 3 RESIDUE RANGE : A 631 A 631 REMARK 3 ORIGIN FOR THE GROUP (A): 73.5939 22.1672 10.9814 REMARK 3 T TENSOR REMARK 3 T11: 0.2438 T22: -0.0259 REMARK 3 T33: 0.0163 T12: 0.1771 REMARK 3 T13: 0.1065 T23: 0.1452 REMARK 3 L TENSOR REMARK 3 L11: 1.8962 L22: 2.9378 REMARK 3 L33: 9.9328 L12: 0.6323 REMARK 3 L13: 1.5421 L23: 4.1284 REMARK 3 S TENSOR REMARK 3 S11: -0.0267 S12: -0.3572 S13: 0.3370 REMARK 3 S21: 0.3245 S22: -0.2254 S23: 0.1702 REMARK 3 S31: -0.1575 S32: -0.3940 S33: 0.2521 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3N85 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059500. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-07; 08-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 110; 110 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ALS; ALS REMARK 200 BEAMLINE : 5.0.1; 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : .98; 1.0 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111); REMARK 200 SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52459 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1S78 CHAIN A, 1FVD CHAINS A,B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NACL, NA/K-PHOSPHATE, LI-SULFATE, PH REMARK 280 7.3, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 165.42550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 165.42550 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 165.42550 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 165.42550 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 165.42550 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 165.42550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: NONAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: NONAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 39450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 140040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -784.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L, H, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 182.22000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 91.11000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 157.80715 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 101 REMARK 465 ASN A 102 REMARK 465 ASN A 103 REMARK 465 THR A 104 REMARK 465 THR A 105 REMARK 465 PRO A 106 REMARK 465 VAL A 107 REMARK 465 THR A 108 REMARK 465 GLY A 109 REMARK 465 ALA A 110 REMARK 465 ALA A 248 REMARK 465 LEU A 249 REMARK 465 VAL A 250 REMARK 465 THR A 251 REMARK 465 TYR A 252 REMARK 465 PRO A 621 REMARK 465 ALA A 622 REMARK 465 GLU A 623 REMARK 465 GLN A 624 REMARK 465 GLU L 215 REMARK 465 ILE L 216 REMARK 465 SER L 217 REMARK 465 LYS H 133 REMARK 465 SER H 134 REMARK 465 THR H 135 REMARK 465 SER H 136 REMARK 465 SER H 219 REMARK 465 CYS H 220 REMARK 465 ASP H 221 REMARK 465 LYS H 222 REMARK 465 THR H 223 REMARK 465 HIS H 224 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 485 CD GLU A 485 OE2 0.082 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 8 75.63 -152.47 REMARK 500 LYS A 10 -124.18 48.47 REMARK 500 LEU A 74 37.84 -98.65 REMARK 500 TYR A 141 -9.56 77.96 REMARK 500 LYS A 178 -82.99 -28.54 REMARK 500 ARG A 195 -53.74 -127.49 REMARK 500 CYS A 202 109.95 41.89 REMARK 500 GLU A 216 -23.84 -37.07 REMARK 500 ALA A 220 -22.74 66.48 REMARK 500 HIS A 235 -65.92 -121.44 REMARK 500 PRO A 261 -167.96 -60.60 REMARK 500 ASN A 262 99.47 65.46 REMARK 500 GLU A 264 -121.99 21.97 REMARK 500 PRO A 294 -179.58 -65.91 REMARK 500 GLN A 298 -136.99 -95.00 REMARK 500 GLU A 299 93.80 -176.20 REMARK 500 GLU A 326 -128.92 50.21 REMARK 500 ASN A 416 14.78 54.68 REMARK 500 ALA A 418 -35.77 -138.76 REMARK 500 ARG A 465 -66.18 -108.77 REMARK 500 ARG A 495 20.00 56.29 REMARK 500 GLN A 511 -101.38 -113.95 REMARK 500 LEU A 528 -92.81 -43.00 REMARK 500 HIS A 567 -114.77 -127.41 REMARK 500 PRO A 571 118.18 -28.90 REMARK 500 SER A 587 -7.85 72.44 REMARK 500 PRO A 605 -135.85 -85.16 REMARK 500 CYS A 608 176.11 62.21 REMARK 500 THR A 609 -68.28 69.50 REMARK 500 HIS A 610 75.29 -103.71 REMARK 500 CYS A 612 130.46 70.73 REMARK 500 VAL A 613 124.20 -173.24 REMARK 500 ASP A 614 -92.61 43.99 REMARK 500 LEU A 615 44.75 -107.28 REMARK 500 ASP A 616 137.95 63.14 REMARK 500 SER L 30 -144.73 57.52 REMARK 500 ALA L 51 -51.18 67.33 REMARK 500 SER L 127 -25.30 -151.01 REMARK 500 ASN L 138 82.71 60.25 REMARK 500 ARG L 211 109.78 -45.32 REMARK 500 SER H 97 -75.72 57.55 REMARK 500 SER H 98 59.32 -171.27 REMARK 500 SER H 126 -164.94 -115.78 REMARK 500 ASP H 148 75.24 62.75 REMARK 500 PRO H 217 92.25 -62.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1N8Z RELATED DB: PDB REMARK 900 HER2 ECD WITH HERCEPTIN FAB REMARK 900 RELATED ID: 1S78 RELATED DB: PDB REMARK 900 HER2 ECD WITH PERTUZUMAB FAB REMARK 900 RELATED ID: 1IVO RELATED DB: PDB REMARK 900 EGFR ECD WITH EGF REMARK 900 RELATED ID: 1MOX RELATED DB: PDB REMARK 900 EGFR ECD WITH TGF-ALPHA REMARK 900 RELATED ID: 3I2T RELATED DB: PDB REMARK 900 DROSOPHILA EGFR ECD REMARK 900 RELATED ID: 1ZA3 RELATED DB: PDB REMARK 900 TYROSINE/SERINE BINARY FAB COMPLEXED WITH DEATH RECEPTOR 5 DBREF 3N85 A 1 624 UNP P04626 ERBB2_HUMAN 23 646 DBREF 3N85 H 1 218 PDB 3N85 3N85 1 218 DBREF 3N85 L 1 214 PDB 3N85 3N85 1 214 SEQRES 1 A 624 THR GLN VAL CYS THR GLY THR ASP MET LYS LEU ARG LEU SEQRES 2 A 624 PRO ALA SER PRO GLU THR HIS LEU ASP MET LEU ARG HIS SEQRES 3 A 624 LEU TYR GLN GLY CYS GLN VAL VAL GLN GLY ASN LEU GLU SEQRES 4 A 624 LEU THR TYR LEU PRO THR ASN ALA SER LEU SER PHE LEU SEQRES 5 A 624 GLN ASP ILE GLN GLU VAL GLN GLY TYR VAL LEU ILE ALA SEQRES 6 A 624 HIS ASN GLN VAL ARG GLN VAL PRO LEU GLN ARG LEU ARG SEQRES 7 A 624 ILE VAL ARG GLY THR GLN LEU PHE GLU ASP ASN TYR ALA SEQRES 8 A 624 LEU ALA VAL LEU ASP ASN GLY ASP PRO LEU ASN ASN THR SEQRES 9 A 624 THR PRO VAL THR GLY ALA SER PRO GLY GLY LEU ARG GLU SEQRES 10 A 624 LEU GLN LEU ARG SER LEU THR GLU ILE LEU LYS GLY GLY SEQRES 11 A 624 VAL LEU ILE GLN ARG ASN PRO GLN LEU CYS TYR GLN ASP SEQRES 12 A 624 THR ILE LEU TRP LYS ASP ILE PHE HIS LYS ASN ASN GLN SEQRES 13 A 624 LEU ALA LEU THR LEU ILE ASP THR ASN ARG SER ARG ALA SEQRES 14 A 624 CYS HIS PRO CYS SER PRO MET CYS LYS GLY SER ARG CYS SEQRES 15 A 624 TRP GLY GLU SER SER GLU ASP CYS GLN SER LEU THR ARG SEQRES 16 A 624 THR VAL CYS ALA GLY GLY CYS ALA ARG CYS LYS GLY PRO SEQRES 17 A 624 LEU PRO THR ASP CYS CYS HIS GLU GLN CYS ALA ALA GLY SEQRES 18 A 624 CYS THR GLY PRO LYS HIS SER ASP CYS LEU ALA CYS LEU SEQRES 19 A 624 HIS PHE ASN HIS SER GLY ILE CYS GLU LEU HIS CYS PRO SEQRES 20 A 624 ALA LEU VAL THR TYR ASN THR ASP THR PHE GLU SER MET SEQRES 21 A 624 PRO ASN PRO GLU GLY ARG TYR THR PHE GLY ALA SER CYS SEQRES 22 A 624 VAL THR ALA CYS PRO TYR ASN TYR LEU SER THR ASP VAL SEQRES 23 A 624 GLY SER CYS THR LEU VAL CYS PRO LEU HIS ASN GLN GLU SEQRES 24 A 624 VAL THR ALA GLU ASP GLY THR GLN ARG CYS GLU LYS CYS SEQRES 25 A 624 SER LYS PRO CYS ALA ARG VAL CYS TYR GLY LEU GLY MET SEQRES 26 A 624 GLU HIS LEU ARG GLU VAL ARG ALA VAL THR SER ALA ASN SEQRES 27 A 624 ILE GLN GLU PHE ALA GLY CYS LYS LYS ILE PHE GLY SER SEQRES 28 A 624 LEU ALA PHE LEU PRO GLU SER PHE ASP GLY ASP PRO ALA SEQRES 29 A 624 SER ASN THR ALA PRO LEU GLN PRO GLU GLN LEU GLN VAL SEQRES 30 A 624 PHE GLU THR LEU GLU GLU ILE THR GLY TYR LEU TYR ILE SEQRES 31 A 624 SER ALA TRP PRO ASP SER LEU PRO ASP LEU SER VAL PHE SEQRES 32 A 624 GLN ASN LEU GLN VAL ILE ARG GLY ARG ILE LEU HIS ASN SEQRES 33 A 624 GLY ALA TYR SER LEU THR LEU GLN GLY LEU GLY ILE SER SEQRES 34 A 624 TRP LEU GLY LEU ARG SER LEU ARG GLU LEU GLY SER GLY SEQRES 35 A 624 LEU ALA LEU ILE HIS HIS ASN THR HIS LEU CYS PHE VAL SEQRES 36 A 624 HIS THR VAL PRO TRP ASP GLN LEU PHE ARG ASN PRO HIS SEQRES 37 A 624 GLN ALA LEU LEU HIS THR ALA ASN ARG PRO GLU ASP GLU SEQRES 38 A 624 CYS VAL GLY GLU GLY LEU ALA CYS HIS GLN LEU CYS ALA SEQRES 39 A 624 ARG GLY HIS CYS TRP GLY PRO GLY PRO THR GLN CYS VAL SEQRES 40 A 624 ASN CYS SER GLN PHE LEU ARG GLY GLN GLU CYS VAL GLU SEQRES 41 A 624 GLU CYS ARG VAL LEU GLN GLY LEU PRO ARG GLU TYR VAL SEQRES 42 A 624 ASN ALA ARG HIS CYS LEU PRO CYS HIS PRO GLU CYS GLN SEQRES 43 A 624 PRO GLN ASN GLY SER VAL THR CYS PHE GLY PRO GLU ALA SEQRES 44 A 624 ASP GLN CYS VAL ALA CYS ALA HIS TYR LYS ASP PRO PRO SEQRES 45 A 624 PHE CYS VAL ALA ARG CYS PRO SER GLY VAL LYS PRO ASP SEQRES 46 A 624 LEU SER TYR MET PRO ILE TRP LYS PHE PRO ASP GLU GLU SEQRES 47 A 624 GLY ALA CYS GLN PRO CYS PRO ILE ASN CYS THR HIS SER SEQRES 48 A 624 CYS VAL ASP LEU ASP ASP LYS GLY CYS PRO ALA GLU GLN SEQRES 1 L 217 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 217 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 217 GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 L 217 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SER SEQRES 5 L 217 SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 217 ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 217 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN TRP SEQRES 8 L 217 TRP TRP TRP PRO SER THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 L 217 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 217 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 217 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 217 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 217 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 217 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 217 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 217 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 217 PHE ASN ARG GLY GLU CYS GLU ILE SER SEQRES 1 H 224 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 224 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 224 PHE SER ILE TRP TRP SER TRP ILE HIS TRP VAL ARG GLN SEQRES 4 H 224 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SER ILE SER SEQRES 5 H 224 PRO SER SER GLY TRP THR SER TYR ALA ASP SER VAL LYS SEQRES 6 H 224 GLY ARG PHE THR ILE SER ALA ASP THR SER LYS ASN THR SEQRES 7 H 224 ALA TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 224 ALA VAL TYR TYR CYS ALA ARG TRP TRP SER SER ALA MET SEQRES 9 H 224 ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SER SEQRES 10 H 224 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 11 H 224 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 12 H 224 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 13 H 224 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 H 224 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 H 224 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 16 H 224 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 H 224 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP SEQRES 18 H 224 LYS THR HIS MODRES 3N85 ASN A 237 ASN GLYCOSYLATION SITE MODRES 3N85 ASN A 165 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET FUC B 4 10 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET CL A 625 1 HET SO4 A 626 5 HET SO4 A 627 5 HET SO4 A 628 5 HET SO4 A 629 5 HET SO4 A 630 5 HET SO4 A 631 5 HET SO4 A 632 5 HET SO4 A 633 5 HET SO4 A 634 5 HET SO4 A 635 5 HET SO4 A 636 5 HET SO4 A 637 5 HET SO4 A 638 5 HET SO4 L 218 5 HET SO4 L 219 5 HET SO4 H 225 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 4 NAG 4(C8 H15 N O6) FORMUL 4 BMA 2(C6 H12 O6) FORMUL 4 FUC C6 H12 O5 FORMUL 6 CL CL 1- FORMUL 7 SO4 16(O4 S 2-) HELIX 1 1 SER A 16 GLU A 18 5 3 HELIX 2 2 THR A 19 GLN A 29 1 11 HELIX 3 3 LEU A 49 GLN A 53 5 5 HELIX 4 4 LEU A 85 ASP A 88 5 4 HELIX 5 5 LEU A 146 PHE A 151 1 6 HELIX 6 6 LYS A 153 THR A 160 5 8 HELIX 7 7 LEU A 209 CYS A 213 5 5 HELIX 8 8 MET A 325 ARG A 329 5 5 HELIX 9 9 ASN A 338 ALA A 343 5 6 HELIX 10 10 LEU A 355 GLY A 361 1 7 HELIX 11 11 GLN A 371 LEU A 381 5 11 HELIX 12 12 LEU A 400 GLN A 404 5 5 HELIX 13 13 LEU A 414 GLY A 417 5 4 HELIX 14 14 PRO A 459 PHE A 464 1 6 HELIX 15 15 PRO A 478 CYS A 482 5 5 HELIX 16 16 CYS A 493 HIS A 497 5 5 HELIX 17 17 GLN L 79 PHE L 83 5 5 HELIX 18 18 SER L 121 LYS L 126 1 6 HELIX 19 19 LYS L 183 LYS L 188 1 6 HELIX 20 20 ARG H 83 THR H 87 5 5 HELIX 21 21 LYS H 205 ASN H 208 5 4 SHEET 1 A 5 VAL A 3 THR A 5 0 SHEET 2 A 5 VAL A 33 GLN A 35 1 O GLN A 35 N CYS A 4 SHEET 3 A 5 GLU A 57 VAL A 58 1 O GLU A 57 N VAL A 34 SHEET 4 A 5 ILE A 79 VAL A 80 1 O ILE A 79 N VAL A 58 SHEET 5 A 5 GLU A 125 ILE A 126 1 O GLU A 125 N VAL A 80 SHEET 1 B 5 LEU A 38 THR A 41 0 SHEET 2 B 5 VAL A 62 ALA A 65 1 O LEU A 63 N LEU A 38 SHEET 3 B 5 TYR A 90 LEU A 95 1 O ALA A 93 N VAL A 62 SHEET 4 B 5 GLY A 130 GLN A 134 1 O GLY A 130 N ALA A 91 SHEET 5 B 5 LEU A 161 ILE A 162 1 O LEU A 161 N ILE A 133 SHEET 1 C 2 CYS A 218 CYS A 222 0 SHEET 2 C 2 CYS A 230 CYS A 233 -1 O LEU A 231 N GLY A 221 SHEET 1 D 2 PHE A 236 HIS A 238 0 SHEET 2 D 2 ILE A 241 GLU A 243 -1 O ILE A 241 N HIS A 238 SHEET 1 E 2 TYR A 267 PHE A 269 0 SHEET 2 E 2 SER A 272 VAL A 274 -1 O VAL A 274 N TYR A 267 SHEET 1 F 2 LEU A 282 SER A 283 0 SHEET 2 F 2 CYS A 289 THR A 290 -1 O THR A 290 N LEU A 282 SHEET 1 G 2 VAL A 300 THR A 301 0 SHEET 2 G 2 GLN A 307 ARG A 308 -1 O ARG A 308 N VAL A 300 SHEET 1 H 5 CYS A 320 TYR A 321 0 SHEET 2 H 5 LYS A 347 PHE A 349 1 O PHE A 349 N CYS A 320 SHEET 3 H 5 GLU A 383 ILE A 384 1 O GLU A 383 N ILE A 348 SHEET 4 H 5 VAL A 408 ILE A 409 1 O VAL A 408 N ILE A 384 SHEET 5 H 5 GLU A 438 LEU A 439 1 O GLU A 438 N ILE A 409 SHEET 1 I 5 LEU A 352 PHE A 354 0 SHEET 2 I 5 LEU A 388 ILE A 390 1 O TYR A 389 N PHE A 354 SHEET 3 I 5 TYR A 419 GLN A 424 1 O THR A 422 N ILE A 390 SHEET 4 I 5 LEU A 443 HIS A 447 1 O LEU A 445 N LEU A 421 SHEET 5 I 5 LEU A 471 THR A 474 1 O LEU A 472 N ALA A 444 SHEET 1 J 2 PHE A 512 ARG A 514 0 SHEET 2 J 2 GLU A 517 VAL A 519 -1 O VAL A 519 N PHE A 512 SHEET 1 K 2 GLU A 531 VAL A 533 0 SHEET 2 K 2 CYS A 538 PRO A 540 -1 O LEU A 539 N TYR A 532 SHEET 1 L 2 TYR A 568 ASP A 570 0 SHEET 2 L 2 PHE A 573 VAL A 575 -1 O PHE A 573 N ASP A 570 SHEET 1 M 3 SER A 580 VAL A 582 0 SHEET 2 M 3 ILE A 591 PHE A 594 -1 O ILE A 591 N VAL A 582 SHEET 3 M 3 GLN A 602 PRO A 603 -1 O GLN A 602 N PHE A 594 SHEET 1 N 4 MET L 4 SER L 7 0 SHEET 2 N 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 N 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 N 4 PHE L 62 SER L 67 -1 N SER L 65 O THR L 72 SHEET 1 O 6 SER L 10 SER L 14 0 SHEET 2 O 6 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 O 6 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 O 6 VAL L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 O 6 LYS L 45 TYR L 49 -1 O ILE L 48 N TRP L 35 SHEET 6 O 6 SER L 53 LEU L 54 -1 O SER L 53 N TYR L 49 SHEET 1 P 4 SER L 10 SER L 14 0 SHEET 2 P 4 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 P 4 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 P 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 Q 4 SER L 114 PHE L 118 0 SHEET 2 Q 4 THR L 129 PHE L 139 -1 O ASN L 137 N SER L 114 SHEET 3 Q 4 TYR L 173 SER L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 Q 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 R 4 ALA L 153 LEU L 154 0 SHEET 2 R 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 R 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 R 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 S 4 GLN H 3 SER H 7 0 SHEET 2 S 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 S 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 S 4 PHE H 67 ASP H 72 -1 N SER H 70 O TYR H 79 SHEET 1 T 6 GLY H 10 VAL H 12 0 SHEET 2 T 6 THR H 106 VAL H 110 1 O THR H 109 N GLY H 10 SHEET 3 T 6 ALA H 88 TRP H 96 -1 N ALA H 88 O VAL H 108 SHEET 4 T 6 ILE H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 T 6 GLU H 46 SER H 52 -1 O ALA H 49 N TRP H 36 SHEET 6 T 6 TRP H 56 TYR H 59 -1 O SER H 58 N SER H 50 SHEET 1 U 4 GLY H 10 VAL H 12 0 SHEET 2 U 4 THR H 106 VAL H 110 1 O THR H 109 N GLY H 10 SHEET 3 U 4 ALA H 88 TRP H 96 -1 N ALA H 88 O VAL H 108 SHEET 4 U 4 ALA H 99 TRP H 102 -1 O ALA H 99 N TRP H 96 SHEET 1 V 4 SER H 119 LEU H 123 0 SHEET 2 V 4 THR H 139 TYR H 149 -1 O GLY H 143 N LEU H 123 SHEET 3 V 4 TYR H 180 PRO H 189 -1 O TYR H 180 N TYR H 149 SHEET 4 V 4 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 W 4 SER H 119 LEU H 123 0 SHEET 2 W 4 THR H 139 TYR H 149 -1 O GLY H 143 N LEU H 123 SHEET 3 W 4 TYR H 180 PRO H 189 -1 O TYR H 180 N TYR H 149 SHEET 4 W 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 X 3 THR H 155 TRP H 158 0 SHEET 2 X 3 TYR H 198 HIS H 204 -1 O ASN H 201 N SER H 157 SHEET 3 X 3 THR H 209 VAL H 215 -1 O VAL H 215 N TYR H 198 SSBOND 1 CYS A 4 CYS A 31 1555 1555 2.05 SSBOND 2 CYS A 140 CYS A 170 1555 1555 2.05 SSBOND 3 CYS A 173 CYS A 182 1555 1555 2.05 SSBOND 4 CYS A 177 CYS A 190 1555 1555 2.05 SSBOND 5 CYS A 198 CYS A 205 1555 1555 2.04 SSBOND 6 CYS A 202 CYS A 213 1555 1555 2.03 SSBOND 7 CYS A 214 CYS A 222 1555 1555 2.05 SSBOND 8 CYS A 218 CYS A 230 1555 1555 2.03 SSBOND 9 CYS A 233 CYS A 242 1555 1555 2.05 SSBOND 10 CYS A 246 CYS A 273 1555 1555 2.04 SSBOND 11 CYS A 277 CYS A 289 1555 1555 2.03 SSBOND 12 CYS A 293 CYS A 309 1555 1555 2.04 SSBOND 13 CYS A 312 CYS A 316 1555 1555 2.04 SSBOND 14 CYS A 320 CYS A 345 1555 1555 2.04 SSBOND 15 CYS A 453 CYS A 482 1555 1555 2.04 SSBOND 16 CYS A 489 CYS A 498 1555 1555 2.04 SSBOND 17 CYS A 493 CYS A 506 1555 1555 2.04 SSBOND 18 CYS A 509 CYS A 518 1555 1555 2.04 SSBOND 19 CYS A 522 CYS A 538 1555 1555 2.04 SSBOND 20 CYS A 541 CYS A 554 1555 1555 2.05 SSBOND 21 CYS A 545 CYS A 562 1555 1555 2.04 SSBOND 22 CYS A 565 CYS A 574 1555 1555 2.04 SSBOND 23 CYS A 578 CYS A 601 1555 1555 2.04 SSBOND 24 CYS A 604 CYS A 612 1555 1555 2.04 SSBOND 25 CYS A 608 CYS A 620 1555 1555 2.04 SSBOND 26 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 27 CYS L 134 CYS L 194 1555 1555 2.03 SSBOND 28 CYS H 22 CYS H 92 1555 1555 2.05 SSBOND 29 CYS H 144 CYS H 200 1555 1555 2.04 LINK ND2 ASN A 165 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 237 C1 NAG C 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 4 1555 1555 1.46 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 CISPEP 1 PRO A 571 PRO A 572 0 -0.04 CISPEP 2 SER L 7 PRO L 8 0 -2.28 CISPEP 3 TRP L 94 PRO L 95 0 -1.67 CISPEP 4 TYR L 140 PRO L 141 0 1.82 CISPEP 5 PHE H 150 PRO H 151 0 -2.31 CISPEP 6 GLU H 152 PRO H 153 0 -1.50 CRYST1 182.220 182.220 330.851 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005488 0.003168 0.000000 0.00000 SCALE2 0.000000 0.006337 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003023 0.00000