PDB Short entry for 3NHA HEADER TRANSPORT PROTEIN 14-JUN-10 3NHA TITLE NUCLEOTIDE BINDING DOMAIN OF HUMAN ABCB6 (ADP MG BOUND STRUCTURE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 6, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NUCLEOTIDE BINDING DOMAIN OF THE HUMAN ACB-TRANSPORTER COMPND 5 ABCB6; COMPND 6 SYNONYM: MITOCHONDRIAL ABC TRANSPORTER 3, MT-ABC TRANSPORTER 3, COMPND 7 UBIQUITOUSLY-EXPRESSED MAMMALIAN ABC HALF TRANSPORTER, P- COMPND 8 GLYCOPROTEIN-RELATED PROTEIN; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABCB6, MTABC3, PRP, UMAT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TUNER (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS ABC-TRANSPORTER, ABCB6, NUCLEOTIDE BINDING DOMAIN, HEME BIOSYNTHESIS, KEYWDS 2 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.HAFFKE,A.MENZEL,Y.CARIUS,D.JAHN,D.W.HEINZ REVDAT 4 06-SEP-23 3NHA 1 REMARK SEQADV LINK REVDAT 3 27-SEP-17 3NHA 1 REMARK REVDAT 2 21-MAR-12 3NHA 1 JRNL VERSN REVDAT 1 25-AUG-10 3NHA 0 JRNL AUTH M.HAFFKE,A.MENZEL,Y.CARIUS,D.JAHN,D.W.HEINZ JRNL TITL STRUCTURES OF THE NUCLEOTIDE-BINDING DOMAIN OF THE HUMAN JRNL TITL 2 ABCB6 TRANSPORTER AND ITS COMPLEXES WITH NUCLEOTIDES. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 66 979 2010 JRNL REFN ISSN 0907-4449 JRNL PMID 20823549 JRNL DOI 10.1107/S0907444910028593 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 17052 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 853 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1163 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2111 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 129 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.17000 REMARK 3 B22 (A**2) : 1.08000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.202 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.128 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.152 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2189 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2964 ; 1.619 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 280 ; 6.657 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 96 ;39.433 ;23.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 371 ;15.714 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;17.462 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 343 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1626 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1377 ; 0.862 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2207 ; 1.478 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 812 ; 2.673 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 755 ; 4.044 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 550 A 573 REMARK 3 ORIGIN FOR THE GROUP (A): 29.3093 11.4644 -35.5318 REMARK 3 T TENSOR REMARK 3 T11: 0.0071 T22: 0.0691 REMARK 3 T33: 0.1263 T12: -0.0239 REMARK 3 T13: 0.0062 T23: -0.0722 REMARK 3 L TENSOR REMARK 3 L11: 6.8556 L22: 3.6297 REMARK 3 L33: 12.9448 L12: -0.3127 REMARK 3 L13: 2.0188 L23: 2.2173 REMARK 3 S TENSOR REMARK 3 S11: 0.1444 S12: -0.0952 S13: -0.2392 REMARK 3 S21: 0.0095 S22: -0.0026 S23: 0.0952 REMARK 3 S31: 0.4042 S32: 0.0153 S33: -0.1418 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 574 A 672 REMARK 3 ORIGIN FOR THE GROUP (A): 13.7489 -2.8336 -10.7125 REMARK 3 T TENSOR REMARK 3 T11: 0.0504 T22: 0.0716 REMARK 3 T33: 0.0426 T12: -0.0239 REMARK 3 T13: 0.0007 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 1.9445 L22: 3.4467 REMARK 3 L33: 2.2415 L12: -0.5504 REMARK 3 L13: 0.3774 L23: -0.1261 REMARK 3 S TENSOR REMARK 3 S11: 0.0133 S12: 0.1507 S13: 0.2230 REMARK 3 S21: -0.2446 S22: -0.0436 S23: -0.0914 REMARK 3 S31: -0.2083 S32: 0.0339 S33: 0.0303 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 673 A 742 REMARK 3 ORIGIN FOR THE GROUP (A): 32.3307 7.4831 8.2549 REMARK 3 T TENSOR REMARK 3 T11: 0.1459 T22: 0.1819 REMARK 3 T33: 0.1575 T12: -0.0307 REMARK 3 T13: 0.0395 T23: -0.0649 REMARK 3 L TENSOR REMARK 3 L11: 7.0202 L22: 4.8044 REMARK 3 L33: 5.6463 L12: 0.4003 REMARK 3 L13: -0.2516 L23: 1.2039 REMARK 3 S TENSOR REMARK 3 S11: 0.0681 S12: 0.1214 S13: 0.3033 REMARK 3 S21: -0.3102 S22: 0.1627 S23: -0.6655 REMARK 3 S31: -0.2745 S32: 0.6578 S33: -0.2308 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 743 A 828 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0472 -15.0586 2.3264 REMARK 3 T TENSOR REMARK 3 T11: 0.0539 T22: 0.1291 REMARK 3 T33: 0.0547 T12: 0.0089 REMARK 3 T13: 0.0071 T23: 0.0261 REMARK 3 L TENSOR REMARK 3 L11: 2.0088 L22: 1.9689 REMARK 3 L33: 0.6560 L12: -0.1646 REMARK 3 L13: 0.2776 L23: -0.4503 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: -0.2836 S13: -0.1487 REMARK 3 S21: 0.1704 S22: 0.0410 S23: -0.0233 REMARK 3 S31: 0.0367 S32: 0.0125 S33: 0.0009 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 3NHA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059827. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.815 REMARK 200 MONOCHROMATOR : GE(111) TRIANGULAR BENT REMARK 200 COMPRESSING 7 FANKUCHEN CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR555 FLAT PANEL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17052 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 44.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3NH6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES PH 6.5, 40% (V/V) PEG400, 3MM REMARK 280 ADP, 3MM MAGNESIUM CHLORIDE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.13600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.55650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.35400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.55650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.13600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.35400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 537 REMARK 465 GLY A 538 REMARK 465 SER A 539 REMARK 465 SER A 540 REMARK 465 HIS A 541 REMARK 465 HIS A 542 REMARK 465 HIS A 543 REMARK 465 HIS A 544 REMARK 465 HIS A 545 REMARK 465 HIS A 546 REMARK 465 SER A 547 REMARK 465 SER A 548 REMARK 465 GLY A 549 REMARK 465 GLY A 602 REMARK 465 GLU A 829 REMARK 465 GLU A 830 REMARK 465 THR A 831 REMARK 465 SER A 832 REMARK 465 GLU A 833 REMARK 465 ASP A 834 REMARK 465 THR A 835 REMARK 465 LYS A 836 REMARK 465 PRO A 837 REMARK 465 GLN A 838 REMARK 465 THR A 839 REMARK 465 MET A 840 REMARK 465 GLU A 841 REMARK 465 ARG A 842 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 571 CG CD OE1 OE2 REMARK 470 ASP A 601 CG OD1 OD2 REMARK 470 ARG A 603 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 828 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 570 -79.14 -75.50 REMARK 500 GLU A 571 85.71 -65.24 REMARK 500 GLU A 573 -141.24 -116.36 REMARK 500 GLN A 586 -82.43 -111.73 REMARK 500 TYR A 686 -34.22 -38.99 REMARK 500 ARG A 688 96.18 -166.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 3 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A 2 O2B REMARK 620 2 HOH A 48 O 80.9 REMARK 620 3 HOH A 78 O 171.1 90.3 REMARK 620 4 HOH A 105 O 83.4 94.2 98.9 REMARK 620 5 HOH A 133 O 91.0 73.2 85.0 166.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NH6 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN THE APO FORM REMARK 900 RELATED ID: 3NH9 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN THE ATP BOUND FORM REMARK 900 RELATED ID: 3NHB RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN THE ADP BOUND FORM DBREF 3NHA A 558 842 UNP Q9NP58 ABCB6_HUMAN 558 842 SEQADV 3NHA MET A 537 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA GLY A 538 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA SER A 539 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA SER A 540 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA HIS A 541 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA HIS A 542 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA HIS A 543 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA HIS A 544 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA HIS A 545 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA HIS A 546 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA SER A 547 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA SER A 548 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA GLY A 549 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA LEU A 550 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA VAL A 551 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA PRO A 552 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA ARG A 553 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA GLY A 554 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA SER A 555 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA HIS A 556 UNP Q9NP58 EXPRESSION TAG SEQADV 3NHA MET A 557 UNP Q9NP58 EXPRESSION TAG SEQRES 1 A 306 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 306 LEU VAL PRO ARG GLY SER HIS MET PHE ILE ASP MET GLU SEQRES 3 A 306 ASN MET PHE ASP LEU LEU LYS GLU GLU THR GLU VAL LYS SEQRES 4 A 306 ASP LEU PRO GLY ALA GLY PRO LEU ARG PHE GLN LYS GLY SEQRES 5 A 306 ARG ILE GLU PHE GLU ASN VAL HIS PHE SER TYR ALA ASP SEQRES 6 A 306 GLY ARG GLU THR LEU GLN ASP VAL SER PHE THR VAL MET SEQRES 7 A 306 PRO GLY GLN THR LEU ALA LEU VAL GLY PRO SER GLY ALA SEQRES 8 A 306 GLY LYS SER THR ILE LEU ARG LEU LEU PHE ARG PHE TYR SEQRES 9 A 306 ASP ILE SER SER GLY CYS ILE ARG ILE ASP GLY GLN ASP SEQRES 10 A 306 ILE SER GLN VAL THR GLN ALA SER LEU ARG SER HIS ILE SEQRES 11 A 306 GLY VAL VAL PRO GLN ASP THR VAL LEU PHE ASN ASP THR SEQRES 12 A 306 ILE ALA ASP ASN ILE ARG TYR GLY ARG VAL THR ALA GLY SEQRES 13 A 306 ASN ASP GLU VAL GLU ALA ALA ALA GLN ALA ALA GLY ILE SEQRES 14 A 306 HIS ASP ALA ILE MET ALA PHE PRO GLU GLY TYR ARG THR SEQRES 15 A 306 GLN VAL GLY GLU ARG GLY LEU LYS LEU SER GLY GLY GLU SEQRES 16 A 306 LYS GLN ARG VAL ALA ILE ALA ARG THR ILE LEU LYS ALA SEQRES 17 A 306 PRO GLY ILE ILE LEU LEU ASP GLU ALA THR SER ALA LEU SEQRES 18 A 306 ASP THR SER ASN GLU ARG ALA ILE GLN ALA SER LEU ALA SEQRES 19 A 306 LYS VAL CYS ALA ASN ARG THR THR ILE VAL VAL ALA HIS SEQRES 20 A 306 ARG LEU SER THR VAL VAL ASN ALA ASP GLN ILE LEU VAL SEQRES 21 A 306 ILE LYS ASP GLY CYS ILE VAL GLU ARG GLY ARG HIS GLU SEQRES 22 A 306 ALA LEU LEU SER ARG GLY GLY VAL TYR ALA ASP MET TRP SEQRES 23 A 306 GLN LEU GLN GLN GLY GLN GLU GLU THR SER GLU ASP THR SEQRES 24 A 306 LYS PRO GLN THR MET GLU ARG HET PO4 A 1 5 HET ADP A 2 27 HET MG A 3 1 HET BME A 4 4 HET BME A 5 4 HETNAM PO4 PHOSPHATE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM BME BETA-MERCAPTOETHANOL FORMUL 2 PO4 O4 P 3- FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 MG MG 2+ FORMUL 5 BME 2(C2 H6 O S) FORMUL 7 HOH *129(H2 O) HELIX 1 1 ARG A 553 ILE A 559 5 7 HELIX 2 2 ASP A 560 LEU A 568 1 9 HELIX 3 3 GLY A 628 PHE A 637 1 10 HELIX 4 4 SER A 655 VAL A 657 5 3 HELIX 5 5 THR A 658 HIS A 665 1 8 HELIX 6 6 ILE A 680 TYR A 686 1 7 HELIX 7 7 GLY A 692 ALA A 703 1 12 HELIX 8 8 ILE A 705 ALA A 711 1 7 HELIX 9 9 GLU A 714 ARG A 717 5 4 HELIX 10 10 SER A 728 ALA A 744 1 17 HELIX 11 11 ASP A 758 ALA A 774 1 17 HELIX 12 12 ARG A 784 ASN A 790 1 7 HELIX 13 13 ARG A 807 GLY A 815 1 9 HELIX 14 14 GLY A 816 GLY A 827 1 12 SHEET 1 A 4 LEU A 606 VAL A 613 0 SHEET 2 A 4 ILE A 590 PHE A 597 -1 N PHE A 592 O PHE A 611 SHEET 3 A 4 SER A 644 ILE A 649 -1 O ARG A 648 N GLU A 591 SHEET 4 A 4 GLN A 652 ASP A 653 -1 O GLN A 652 N ILE A 649 SHEET 1 B 6 ILE A 666 VAL A 669 0 SHEET 2 B 6 ILE A 747 ASP A 751 1 O LEU A 749 N VAL A 669 SHEET 3 B 6 THR A 777 VAL A 781 1 O VAL A 781 N LEU A 750 SHEET 4 B 6 THR A 618 VAL A 622 1 N LEU A 621 O VAL A 780 SHEET 5 B 6 GLN A 793 LYS A 798 1 O ILE A 797 N VAL A 622 SHEET 6 B 6 CYS A 801 GLY A 806 -1 O GLU A 804 N VAL A 796 SHEET 1 C 2 ASP A 678 THR A 679 0 SHEET 2 C 2 GLN A 719 VAL A 720 -1 O VAL A 720 N ASP A 678 LINK O2B ADP A 2 MG MG A 3 1555 1555 2.11 LINK MG MG A 3 O HOH A 48 1555 1555 2.26 LINK MG MG A 3 O HOH A 78 1555 1555 2.27 LINK MG MG A 3 O HOH A 105 1555 1555 2.03 LINK MG MG A 3 O HOH A 133 1555 1555 2.30 SITE 1 AC1 5 HOH A 113 LEU A 750 LEU A 769 CYS A 773 SITE 2 AC1 5 THR A 787 SITE 1 AC2 13 MG A 3 HOH A 48 HOH A 105 HOH A 133 SITE 2 AC2 13 GLU A 562 TYR A 599 THR A 605 GLY A 626 SITE 3 AC2 13 ALA A 627 GLY A 628 LYS A 629 SER A 630 SITE 4 AC2 13 THR A 631 SITE 1 AC3 6 ADP A 2 HOH A 48 HOH A 78 HOH A 105 SITE 2 AC3 6 HOH A 133 GLU A 562 SITE 1 AC4 1 PHE A 639 SITE 1 AC5 4 ILE A 666 GLY A 667 VAL A 668 LYS A 743 CRYST1 56.272 70.708 71.113 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017771 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014062 0.00000