PDB Short entry for 3NVM HEADER TRANSFERASE 08-JUL-10 3NVM TITLE STRUCTURAL BASIS FOR SUBSTRATE PLACEMENT BY AN ARCHAEAL BOX C/D TITLE 2 RIBONUCLEOPROTEIN PARTICLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOP5/NOP56 RELATED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FIBRILLARIN-LIKE RRNA/TRNA 2'-O-METHYLTRANSFERASE; COMPND 7 CHAIN: B; COMPND 8 EC: 2.1.1.-; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 186497; SOURCE 4 STRAIN: ATCC 43587 / DSM 3638 / JCM 8422 / VC1; SOURCE 5 GENE: PF0060; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 10 ORGANISM_TAXID: 186497; SOURCE 11 STRAIN: ATCC 43587 / DSM 3638 / JCM 8422 / VC1; SOURCE 12 GENE: FLPA, PF0059; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NOP DOMAIN, METHYLTRANSFERASE, RIBOSOME BIOGENESIS, SPLICEOSOME KEYWDS 2 BIOGENESIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.XUE,R.WANG,H.LI REVDAT 2 21-FEB-24 3NVM 1 SEQADV REVDAT 1 20-JUL-11 3NVM 0 JRNL AUTH S.XUE,R.WANG,F.YANG,R.M.TERNS,M.P.TERNS,X.ZHANG,E.S.MAXWELL, JRNL AUTH 2 H.LI JRNL TITL STRUCTURAL BASIS FOR SUBSTRATE PLACEMENT BY AN ARCHAEAL BOX JRNL TITL 2 C/D RIBONUCLEOPROTEIN PARTICLE. JRNL REF MOL.CELL V. 39 939 2010 JRNL REFN ISSN 1097-2765 JRNL PMID 20864039 JRNL DOI 10.1016/J.MOLCEL.2010.08.022 REMARK 2 REMARK 2 RESOLUTION. 3.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_357) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 76.7 REMARK 3 NUMBER OF REFLECTIONS : 31528 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.316 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1606 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4360 - 7.5704 0.92 3261 155 0.2379 0.3510 REMARK 3 2 7.5704 - 6.0122 0.95 3387 164 0.2163 0.2831 REMARK 3 3 6.0122 - 5.2532 0.96 3404 174 0.2211 0.2962 REMARK 3 4 5.2532 - 4.7733 0.96 3390 195 0.1828 0.2254 REMARK 3 5 4.7733 - 4.4314 0.97 3419 169 0.1933 0.2219 REMARK 3 6 4.4314 - 4.1703 0.96 3369 201 0.1982 0.2483 REMARK 3 7 4.1703 - 3.9615 0.88 3179 145 0.2393 0.3146 REMARK 3 8 3.9615 - 3.7892 0.71 2496 144 0.2620 0.3210 REMARK 3 9 3.7892 - 3.6433 0.52 1825 125 0.2863 0.3074 REMARK 3 10 3.6433 - 3.5176 0.38 1328 79 0.2878 0.3235 REMARK 3 11 3.5176 - 3.4077 0.25 864 55 0.3017 0.3688 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 191.6 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.510 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 31.08980 REMARK 3 B22 (A**2) : 31.08980 REMARK 3 B33 (A**2) : -62.17970 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4687 REMARK 3 ANGLE : 1.264 6321 REMARK 3 CHIRALITY : 0.079 691 REMARK 3 PLANARITY : 0.006 817 REMARK 3 DIHEDRAL : 18.898 1810 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 25.3119 23.8717 18.9248 REMARK 3 T TENSOR REMARK 3 T11: 0.4248 T22: 2.5461 REMARK 3 T33: 1.2228 T12: -0.3583 REMARK 3 T13: 0.0737 T23: 0.1318 REMARK 3 L TENSOR REMARK 3 L11: -2.2320 L22: 0.9170 REMARK 3 L33: 1.4450 L12: -0.2600 REMARK 3 L13: 1.4771 L23: 0.2432 REMARK 3 S TENSOR REMARK 3 S11: 0.2111 S12: -0.5942 S13: -0.5414 REMARK 3 S21: 0.1879 S22: 0.0191 S23: -0.2699 REMARK 3 S31: -0.0143 S32: -0.7952 S33: -0.2687 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 31.6163 12.2323 49.7715 REMARK 3 T TENSOR REMARK 3 T11: 0.1904 T22: 2.7397 REMARK 3 T33: 1.3517 T12: -0.0749 REMARK 3 T13: 0.1928 T23: -0.0418 REMARK 3 L TENSOR REMARK 3 L11: 0.3280 L22: 2.5898 REMARK 3 L33: 2.1604 L12: -0.0938 REMARK 3 L13: 2.2930 L23: -0.5882 REMARK 3 S TENSOR REMARK 3 S11: -0.6046 S12: -0.2321 S13: 1.1717 REMARK 3 S21: 0.3827 S22: 0.1839 S23: -0.4895 REMARK 3 S31: -0.1295 S32: -1.1186 S33: 0.3530 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NVM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000060334. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 22-ID; 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL; NULL REMARK 200 MONOCHROMATOR : 1.0; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE; CCD REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE; REMARK 200 MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32901 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 80.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 26.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE PH 6.4, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 303K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.45167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 176.90333 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 176.90333 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 88.45167 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 VAL A 2 REMARK 465 MET A 3 REMARK 465 ILE A 4 REMARK 465 MET A 5 REMARK 465 LYS A 6 REMARK 465 ALA A 7 REMARK 465 LYS A 296A REMARK 465 ALA A 296B REMARK 465 LEU A 296C REMARK 465 PHE A 296D REMARK 465 ARG A 296E REMARK 465 HIS A 296F REMARK 465 LEU A 296G REMARK 465 ARG A 296H REMARK 465 THR A 296I REMARK 465 GLY A 296J REMARK 465 ALA A 296K REMARK 465 LYS A 296L REMARK 465 PRO A 296M REMARK 465 GLU A 370 REMARK 465 LYS A 371 REMARK 465 TYR A 372 REMARK 465 MET B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 221 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 21 -23.65 -38.67 REMARK 500 LYS A 34 122.02 -37.39 REMARK 500 ILE A 91 -6.17 -58.44 REMARK 500 ASN A 107 30.15 -72.80 REMARK 500 MET A 122 -72.34 -67.15 REMARK 500 GLN A 137 -74.71 -45.88 REMARK 500 LEU A 142 -19.85 -45.24 REMARK 500 ARG A 157 -85.52 -23.12 REMARK 500 TRP A 159 -77.43 -78.21 REMARK 500 TYR A 160 -7.01 -39.25 REMARK 500 PHE A 164 89.66 -159.13 REMARK 500 VAL A 178 -3.09 -54.82 REMARK 500 VAL A 181 -74.48 -55.97 REMARK 500 LEU A 198 -25.18 106.23 REMARK 500 THR A 215 163.88 90.44 REMARK 500 TRP A 219 158.14 -44.67 REMARK 500 ARG A 242 -73.25 -61.16 REMARK 500 LYS A 243 -75.09 -34.02 REMARK 500 LYS A 244 -73.02 -23.90 REMARK 500 ARG A 251 -5.44 -57.09 REMARK 500 ALA A 257 62.59 -155.87 REMARK 500 ALA A 269 -70.30 -55.83 REMARK 500 HIS A 311 82.63 -169.64 REMARK 500 PHE A 348 -72.70 -78.08 REMARK 500 VAL B 2 85.47 -151.64 REMARK 500 ASP B 17 -159.51 -122.17 REMARK 500 TYR B 36 9.56 81.59 REMARK 500 TRP B 43 -90.79 -102.52 REMARK 500 GLU B 47 69.28 -101.15 REMARK 500 ILE B 82 -12.31 -31.32 REMARK 500 ALA B 83 -143.78 18.94 REMARK 500 THR B 86 -72.68 -67.76 REMARK 500 THR B 87 12.01 -61.73 REMARK 500 ALA B 88 -12.58 -144.25 REMARK 500 ILE B 104 19.78 -141.57 REMARK 500 ARG B 112 -17.86 -47.09 REMARK 500 ARG B 122 25.56 -70.17 REMARK 500 GLU B 136 4.27 -64.67 REMARK 500 ALA B 152 21.78 -70.81 REMARK 500 GLN B 156 -39.29 -39.23 REMARK 500 TYR B 173 -164.06 -122.51 REMARK 500 ALA B 177 95.55 -63.96 REMARK 500 ARG B 198 -76.24 -71.12 REMARK 500 TYR B 203 -16.18 -145.24 REMARK 500 ASP B 218 44.40 24.64 REMARK 500 ALA B 220 88.99 -163.73 REMARK 500 LEU B 221 84.73 -64.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NMU RELATED DB: PDB REMARK 900 RELATED ID: 3NVI RELATED DB: PDB REMARK 900 RELATED ID: 3NVK RELATED DB: PDB DBREF 3NVM A 5 372 UNP Q8U4M1 Q8U4M1_PYRFU 1 369 DBREF 3NVM B 1 227 UNP Q8U4M2 FLPA_PYRFU 1 227 SEQADV 3NVM MET A -5 UNP Q8U4M1 EXPRESSION TAG SEQADV 3NVM HIS A -4 UNP Q8U4M1 EXPRESSION TAG SEQADV 3NVM HIS A -3 UNP Q8U4M1 EXPRESSION TAG SEQADV 3NVM HIS A -2 UNP Q8U4M1 EXPRESSION TAG SEQADV 3NVM HIS A -1 UNP Q8U4M1 EXPRESSION TAG SEQADV 3NVM HIS A 0 UNP Q8U4M1 EXPRESSION TAG SEQADV 3NVM HIS A 1 UNP Q8U4M1 EXPRESSION TAG SEQADV 3NVM VAL A 2 UNP Q8U4M1 EXPRESSION TAG SEQADV 3NVM MET A 3 UNP Q8U4M1 EXPRESSION TAG SEQADV 3NVM ILE A 4 UNP Q8U4M1 EXPRESSION TAG SEQADV 3NVM A UNP Q8U4M1 VAL 141 DELETION SEQADV 3NVM A UNP Q8U4M1 ASP 142 DELETION SEQADV 3NVM A UNP Q8U4M1 LYS 143 DELETION SEQADV 3NVM A UNP Q8U4M1 VAL 144 DELETION SEQADV 3NVM A UNP Q8U4M1 ASP 232 DELETION SEQADV 3NVM A UNP Q8U4M1 ARG 233 DELETION SEQADV 3NVM A UNP Q8U4M1 LEU 234 DELETION SEQADV 3NVM A UNP Q8U4M1 TYR 235 DELETION SEQADV 3NVM MET B -6 UNP Q8U4M2 EXPRESSION TAG SEQADV 3NVM HIS B -5 UNP Q8U4M2 EXPRESSION TAG SEQADV 3NVM HIS B -4 UNP Q8U4M2 EXPRESSION TAG SEQADV 3NVM HIS B -3 UNP Q8U4M2 EXPRESSION TAG SEQADV 3NVM HIS B -2 UNP Q8U4M2 EXPRESSION TAG SEQADV 3NVM HIS B -1 UNP Q8U4M2 EXPRESSION TAG SEQADV 3NVM HIS B 0 UNP Q8U4M2 EXPRESSION TAG SEQRES 1 A 371 MET HIS HIS HIS HIS HIS HIS VAL MET ILE MET LYS ALA SEQRES 2 A 371 PHE ILE SER GLU ASN VAL ARG GLY ILE TYR ALA PHE ASP SEQRES 3 A 371 GLU ASN GLY ASN LEU ILE GLU LYS ARG TYR PHE THR ASP SEQRES 4 A 371 LYS PRO GLU LYS VAL LEU ASP GLN LEU LEU LYS GLY GLU SEQRES 5 A 371 ILE THR LYS ASP LEU GLU GLU LEU LEU ASN SER LEU LYS SEQRES 6 A 371 GLU LYS GLY TYR ASP GLU PHE VAL PHE GLU HIS PRO GLU SEQRES 7 A 371 LEU SER ARG ARG ALA LYS GLU LEU GLY PHE SER ALA THR SEQRES 8 A 371 THR GLU PHE PRO ASN ILE ALA GLY GLU ARG LEU ARG SER SEQRES 9 A 371 ASN PRO GLU GLU PHE LEU GLY GLU ASN TRP PHE GLU GLU SEQRES 10 A 371 TYR TYR LYS VAL GLY VAL ALA LEU THR ARG MET ARG ILE SEQRES 11 A 371 GLN GLU GLN SER GLY ALA ARG ASP LYS MET VAL ILE GLN SEQRES 12 A 371 ALA ILE GLU ALA LEU ASP ASP ILE ASN LEU LEU VAL ALA SEQRES 13 A 371 ARG LEU ARG GLU TRP TYR SER LEU HIS PHE PRO GLU LEU SEQRES 14 A 371 ASP GLU LEU LEU PRO LYS HIS PRO GLN TYR VAL ALA PHE SEQRES 15 A 371 VAL LYS THR VAL GLY HIS ARG ASP ASN ILE ASN GLU GLU SEQRES 16 A 371 VAL LEU ARG GLU LEU GLY LEU SER GLU GLU LYS ILE LYS SEQRES 17 A 371 LYS ILE LEU GLU ALA LYS GLU LYS THR MET GLY ALA TRP SEQRES 18 A 371 MET ASP GLN THR ASP ILE GLU VAL VAL ARG GLN LEU ALA SEQRES 19 A 371 GLU GLU ILE GLN LEU ARG LYS LYS LEU GLU ASP TYR ILE SEQRES 20 A 371 ASP ARG ALA MET ASP ASP VAL ALA PRO ASN LEU LYS ALA SEQRES 21 A 371 LEU VAL GLY ALA LYS LEU ALA ALA ARG LEU ILE SER LEU SEQRES 22 A 371 ALA GLY GLY LEU ARG GLU LEU ALA MET MET PRO SER SER SEQRES 23 A 371 THR ILE GLN VAL LEU GLY ALA GLU LYS ALA LEU PHE ARG SEQRES 24 A 371 HIS LEU ARG THR GLY ALA LYS PRO PRO LYS HIS GLY VAL SEQRES 25 A 371 ILE TYR GLN TYR PRO ALA ILE ASN ARG SER PRO TRP TRP SEQRES 26 A 371 GLN ARG GLY LYS ILE ALA ARG ALA LEU ALA GLY LYS LEU SEQRES 27 A 371 ALA ILE ALA ALA ARG VAL ASP TYR PHE SER GLY GLU TYR SEQRES 28 A 371 ILE ALA GLU GLU LEU LYS LYS GLU LEU GLU ALA ARG ILE SEQRES 29 A 371 ARG GLU ILE LYS GLU LYS TYR SEQRES 1 B 234 MET HIS HIS HIS HIS HIS HIS MET VAL GLU VAL LYS LYS SEQRES 2 B 234 HIS LYS PHE PRO GLY VAL TYR VAL VAL ILE ASP ASP ASP SEQRES 3 B 234 GLY SER GLU LYS ILE ALA THR LYS ASN LEU VAL PRO GLY SEQRES 4 B 234 GLN ARG VAL TYR GLY GLU ARG VAL ILE LYS TRP GLU GLY SEQRES 5 B 234 GLU GLU TYR ARG ILE TRP ASN PRO HIS ARG SER LYS LEU SEQRES 6 B 234 GLY ALA ALA ILE VAL ASN GLY LEU LYS ASN PHE PRO ILE SEQRES 7 B 234 LYS PRO GLY LYS SER VAL LEU TYR LEU GLY ILE ALA SER SEQRES 8 B 234 GLY THR THR ALA SER HIS VAL SER ASP ILE VAL GLY TRP SEQRES 9 B 234 GLU GLY LYS ILE TYR GLY ILE GLU PHE SER PRO ARG VAL SEQRES 10 B 234 LEU ARG GLU LEU VAL PRO ILE VAL GLU GLU ARG ARG ASN SEQRES 11 B 234 ILE ILE PRO ILE LEU GLY ASP ALA THR LYS PRO GLU GLU SEQRES 12 B 234 TYR ARG ALA LEU VAL THR LYS VAL ASP VAL ILE PHE GLU SEQRES 13 B 234 ASP VAL ALA GLN PRO THR GLN ALA LYS ILE LEU ILE ASP SEQRES 14 B 234 ASN ALA LYS ALA TYR LEU LYS ARG GLY GLY TYR GLY MET SEQRES 15 B 234 ILE ALA VAL LYS SER ARG SER ILE ASP VAL THR LYS GLU SEQRES 16 B 234 PRO GLU GLN VAL PHE LYS GLU VAL GLU ARG GLU LEU SER SEQRES 17 B 234 GLU TYR PHE GLU VAL ILE GLU ARG LEU ASN LEU GLU PRO SEQRES 18 B 234 TYR GLU LYS ASP HIS ALA LEU PHE VAL VAL ARG LYS PRO HELIX 1 1 LYS A 34 LEU A 43 1 10 HELIX 2 2 THR A 48 GLU A 60 1 13 HELIX 3 3 GLU A 72 ALA A 77 1 6 HELIX 4 4 ALA A 92 ARG A 97 1 6 HELIX 5 5 ASN A 99 GLY A 105 1 7 HELIX 6 6 ASN A 107 ILE A 124 1 18 HELIX 7 7 ALA A 130 HIS A 163 1 30 HELIX 8 8 GLU A 166 LEU A 171 1 6 HELIX 9 9 LYS A 173 VAL A 184 1 12 HELIX 10 10 HIS A 186 ILE A 190 5 5 HELIX 11 11 GLU A 192 GLU A 197 1 6 HELIX 12 12 GLU A 202 LYS A 206 5 5 HELIX 13 13 THR A 223 ALA A 252 1 26 HELIX 14 14 ALA A 252 ALA A 257 1 6 HELIX 15 15 ALA A 257 GLY A 265 1 9 HELIX 16 16 GLY A 265 GLY A 277 1 13 HELIX 17 17 GLY A 278 MET A 284 1 7 HELIX 18 18 PRO A 286 VAL A 292 1 7 HELIX 19 19 GLY A 312 GLN A 316 5 5 HELIX 20 20 TYR A 317 ARG A 322 1 6 HELIX 21 21 PRO A 324 SER A 349 1 26 HELIX 22 22 ILE A 353 ARG A 366 1 14 HELIX 23 23 GLU A 367 LYS A 369 5 3 HELIX 24 24 SER B 56 ASN B 64 1 9 HELIX 25 25 GLY B 85 GLY B 96 1 12 HELIX 26 26 SER B 107 ARG B 112 1 6 HELIX 27 27 GLU B 113 VAL B 118 1 6 HELIX 28 28 PRO B 134 ARG B 138 5 5 HELIX 29 29 THR B 155 TYR B 167 1 13 HELIX 30 30 GLU B 188 SER B 201 1 14 SHEET 1 A 3 SER A 10 GLU A 11 0 SHEET 2 A 3 GLY A 15 PHE A 19 -1 O TYR A 17 N SER A 10 SHEET 3 A 3 LEU A 25 TYR A 30 -1 O ILE A 26 N ALA A 18 SHEET 1 B 2 VAL A 67 PHE A 68 0 SHEET 2 B 2 THR A 85 THR A 86 1 O THR A 85 N PHE A 68 SHEET 1 C 4 GLU B 3 LYS B 6 0 SHEET 2 C 4 VAL B 12 ILE B 16 -1 O VAL B 14 N LYS B 5 SHEET 3 C 4 GLU B 22 LYS B 27 -1 O ALA B 25 N TYR B 13 SHEET 4 C 4 TYR B 48 ILE B 50 -1 O ARG B 49 N THR B 26 SHEET 1 D 7 ILE B 125 PRO B 126 0 SHEET 2 D 7 ILE B 101 GLY B 103 1 N ILE B 101 O ILE B 125 SHEET 3 D 7 VAL B 77 LEU B 80 1 N TYR B 79 O TYR B 102 SHEET 4 D 7 VAL B 144 GLU B 149 1 O PHE B 148 N LEU B 78 SHEET 5 D 7 LEU B 168 LYS B 179 1 O MET B 175 N ILE B 147 SHEET 6 D 7 HIS B 219 ARG B 225 -1 O VAL B 224 N GLY B 174 SHEET 7 D 7 GLU B 205 ASN B 211 -1 N GLU B 205 O ARG B 225 CISPEP 1 PHE A 88 PRO A 89 0 -5.29 CISPEP 2 GLU B 213 PRO B 214 0 2.26 CRYST1 100.623 100.623 265.355 90.00 90.00 120.00 P 31 1 2 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009938 0.005738 0.000000 0.00000 SCALE2 0.000000 0.011476 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003769 0.00000