PDB Short entry for 3O33 HEADER TRANSCRIPTION 23-JUL-10 3O33 TITLE CRYSTAL STRUCTURE OF TRIM24 PHD-BROMO IN THE FREE STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION INTERMEDIARY FACTOR 1-ALPHA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 824-1006; COMPND 5 SYNONYM: TIF1-ALPHA, TRIPARTITE MOTIF-CONTAINING PROTEIN 24, RING COMPND 6 FINGER PROTEIN 82; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRIM24, RNF82, TIF1, TIF1A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSFDUET-1 KEYWDS PHD FINGER, BROMODOMAIN, TRIM24, BREAST CANCER, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Z.WANG,D.J.PATEL REVDAT 3 06-SEP-23 3O33 1 REMARK SEQADV LINK REVDAT 2 12-JAN-11 3O33 1 JRNL REVDAT 1 15-DEC-10 3O33 0 JRNL AUTH W.W.TSAI,Z.WANG,T.T.YIU,K.C.AKDEMIR,W.XIA,S.WINTER,C.Y.TSAI, JRNL AUTH 2 X.SHI,D.SCHWARZER,W.PLUNKETT,B.ARONOW,O.GOZANI,W.FISCHLE, JRNL AUTH 3 M.C.HUNG,D.J.PATEL,M.C.BARTON JRNL TITL TRIM24 LINKS A NON-CANONICAL HISTONE SIGNATURE TO BREAST JRNL TITL 2 CANCER. JRNL REF NATURE V. 468 927 2010 JRNL REFN ISSN 0028-0836 JRNL PMID 21164480 JRNL DOI 10.1038/NATURE09542 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 50135 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2487 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2578 REMARK 3 BIN FREE R VALUE : 0.2989 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 235 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5739 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 242 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.23 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.270 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.850 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3O33 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060603. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 197 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50497 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.51000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRIES 2PUY, 2YYN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES (PH 7.5), 2.0 M AMMONIUM REMARK 280 SULFATE AND 2% POLYETHYLENE GLYCOL 400, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 823 REMARK 465 PRO A 824 REMARK 465 CYS A 882 REMARK 465 ASP A 883 REMARK 465 ALA A 884 REMARK 465 PRO A 885 REMARK 465 SER A 886 REMARK 465 HIS A 887 REMARK 465 ASN A 888 REMARK 465 SER A 889 REMARK 465 GLU A 890 REMARK 465 LYS A 891 REMARK 465 SER B 823 REMARK 465 SER C 823 REMARK 465 SER C 886 REMARK 465 HIS C 887 REMARK 465 ASN C 888 REMARK 465 SER C 889 REMARK 465 GLU C 890 REMARK 465 SER D 823 REMARK 465 PRO D 824 REMARK 465 CYS D 882 REMARK 465 ASP D 883 REMARK 465 ALA D 884 REMARK 465 PRO D 885 REMARK 465 SER D 886 REMARK 465 HIS D 887 REMARK 465 ASN D 888 REMARK 465 SER D 889 REMARK 465 GLU D 890 REMARK 465 LYS D 891 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 831 -61.67 -96.31 REMARK 500 PRO A 933 111.88 -35.98 REMARK 500 ASP A 934 19.64 56.49 REMARK 500 ASP B 934 -3.10 64.00 REMARK 500 ASN B 941 74.01 -116.92 REMARK 500 ASP C 934 3.97 59.69 REMARK 500 ASN C 941 73.35 -119.90 REMARK 500 ASP C 983 16.60 57.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 829 SG REMARK 620 2 CYS A 832 SG 109.3 REMARK 620 3 HIS A 849 ND1 108.7 91.3 REMARK 620 4 CYS A 852 SG 109.5 118.1 118.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 2 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 841 SG REMARK 620 2 CYS A 844 SG 103.5 REMARK 620 3 CYS A 867 SG 109.0 109.3 REMARK 620 4 CYS A 870 SG 114.7 110.4 109.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 829 SG REMARK 620 2 CYS B 832 SG 113.5 REMARK 620 3 HIS B 849 ND1 100.3 96.3 REMARK 620 4 CYS B 852 SG 110.6 117.3 117.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 2 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 841 SG REMARK 620 2 CYS B 844 SG 106.4 REMARK 620 3 CYS B 867 SG 111.2 112.0 REMARK 620 4 CYS B 870 SG 110.9 107.7 108.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 841 SG REMARK 620 2 CYS C 844 SG 104.4 REMARK 620 3 CYS C 867 SG 110.4 114.0 REMARK 620 4 CYS C 870 SG 109.4 109.0 109.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 2 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 829 SG REMARK 620 2 CYS C 832 SG 111.7 REMARK 620 3 HIS C 849 ND1 99.7 96.0 REMARK 620 4 CYS C 852 SG 110.9 116.5 120.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 1 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 829 SG REMARK 620 2 CYS D 832 SG 113.5 REMARK 620 3 HIS D 849 ND1 99.9 98.6 REMARK 620 4 CYS D 852 SG 109.3 114.8 119.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 2 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 841 SG REMARK 620 2 CYS D 844 SG 105.4 REMARK 620 3 CYS D 867 SG 107.0 110.2 REMARK 620 4 CYS D 870 SG 114.9 110.4 108.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3O34 RELATED DB: PDB REMARK 900 RELATED ID: 3O35 RELATED DB: PDB REMARK 900 RELATED ID: 3O36 RELATED DB: PDB REMARK 900 RELATED ID: 3O37 RELATED DB: PDB DBREF 3O33 A 824 1006 UNP O15164 TIF1A_HUMAN 824 1006 DBREF 3O33 B 824 1006 UNP O15164 TIF1A_HUMAN 824 1006 DBREF 3O33 C 824 1006 UNP O15164 TIF1A_HUMAN 824 1006 DBREF 3O33 D 824 1006 UNP O15164 TIF1A_HUMAN 824 1006 SEQADV 3O33 SER A 823 UNP O15164 EXPRESSION TAG SEQADV 3O33 SER B 823 UNP O15164 EXPRESSION TAG SEQADV 3O33 SER C 823 UNP O15164 EXPRESSION TAG SEQADV 3O33 SER D 823 UNP O15164 EXPRESSION TAG SEQRES 1 A 184 SER PRO ASN GLU ASP TRP CYS ALA VAL CYS GLN ASN GLY SEQRES 2 A 184 GLY GLU LEU LEU CYS CYS GLU LYS CYS PRO LYS VAL PHE SEQRES 3 A 184 HIS LEU SER CYS HIS VAL PRO THR LEU THR ASN PHE PRO SEQRES 4 A 184 SER GLY GLU TRP ILE CYS THR PHE CYS ARG ASP LEU SER SEQRES 5 A 184 LYS PRO GLU VAL GLU TYR ASP CYS ASP ALA PRO SER HIS SEQRES 6 A 184 ASN SER GLU LYS LYS LYS THR GLU GLY LEU VAL LYS LEU SEQRES 7 A 184 THR PRO ILE ASP LYS ARG LYS CYS GLU ARG LEU LEU LEU SEQRES 8 A 184 PHE LEU TYR CYS HIS GLU MET SER LEU ALA PHE GLN ASP SEQRES 9 A 184 PRO VAL PRO LEU THR VAL PRO ASP TYR TYR LYS ILE ILE SEQRES 10 A 184 LYS ASN PRO MET ASP LEU SER THR ILE LYS LYS ARG LEU SEQRES 11 A 184 GLN GLU ASP TYR SER MET TYR SER LYS PRO GLU ASP PHE SEQRES 12 A 184 VAL ALA ASP PHE ARG LEU ILE PHE GLN ASN CYS ALA GLU SEQRES 13 A 184 PHE ASN GLU PRO ASP SER GLU VAL ALA ASN ALA GLY ILE SEQRES 14 A 184 LYS LEU GLU ASN TYR PHE GLU GLU LEU LEU LYS ASN LEU SEQRES 15 A 184 TYR PRO SEQRES 1 B 184 SER PRO ASN GLU ASP TRP CYS ALA VAL CYS GLN ASN GLY SEQRES 2 B 184 GLY GLU LEU LEU CYS CYS GLU LYS CYS PRO LYS VAL PHE SEQRES 3 B 184 HIS LEU SER CYS HIS VAL PRO THR LEU THR ASN PHE PRO SEQRES 4 B 184 SER GLY GLU TRP ILE CYS THR PHE CYS ARG ASP LEU SER SEQRES 5 B 184 LYS PRO GLU VAL GLU TYR ASP CYS ASP ALA PRO SER HIS SEQRES 6 B 184 ASN SER GLU LYS LYS LYS THR GLU GLY LEU VAL LYS LEU SEQRES 7 B 184 THR PRO ILE ASP LYS ARG LYS CYS GLU ARG LEU LEU LEU SEQRES 8 B 184 PHE LEU TYR CYS HIS GLU MET SER LEU ALA PHE GLN ASP SEQRES 9 B 184 PRO VAL PRO LEU THR VAL PRO ASP TYR TYR LYS ILE ILE SEQRES 10 B 184 LYS ASN PRO MET ASP LEU SER THR ILE LYS LYS ARG LEU SEQRES 11 B 184 GLN GLU ASP TYR SER MET TYR SER LYS PRO GLU ASP PHE SEQRES 12 B 184 VAL ALA ASP PHE ARG LEU ILE PHE GLN ASN CYS ALA GLU SEQRES 13 B 184 PHE ASN GLU PRO ASP SER GLU VAL ALA ASN ALA GLY ILE SEQRES 14 B 184 LYS LEU GLU ASN TYR PHE GLU GLU LEU LEU LYS ASN LEU SEQRES 15 B 184 TYR PRO SEQRES 1 C 184 SER PRO ASN GLU ASP TRP CYS ALA VAL CYS GLN ASN GLY SEQRES 2 C 184 GLY GLU LEU LEU CYS CYS GLU LYS CYS PRO LYS VAL PHE SEQRES 3 C 184 HIS LEU SER CYS HIS VAL PRO THR LEU THR ASN PHE PRO SEQRES 4 C 184 SER GLY GLU TRP ILE CYS THR PHE CYS ARG ASP LEU SER SEQRES 5 C 184 LYS PRO GLU VAL GLU TYR ASP CYS ASP ALA PRO SER HIS SEQRES 6 C 184 ASN SER GLU LYS LYS LYS THR GLU GLY LEU VAL LYS LEU SEQRES 7 C 184 THR PRO ILE ASP LYS ARG LYS CYS GLU ARG LEU LEU LEU SEQRES 8 C 184 PHE LEU TYR CYS HIS GLU MET SER LEU ALA PHE GLN ASP SEQRES 9 C 184 PRO VAL PRO LEU THR VAL PRO ASP TYR TYR LYS ILE ILE SEQRES 10 C 184 LYS ASN PRO MET ASP LEU SER THR ILE LYS LYS ARG LEU SEQRES 11 C 184 GLN GLU ASP TYR SER MET TYR SER LYS PRO GLU ASP PHE SEQRES 12 C 184 VAL ALA ASP PHE ARG LEU ILE PHE GLN ASN CYS ALA GLU SEQRES 13 C 184 PHE ASN GLU PRO ASP SER GLU VAL ALA ASN ALA GLY ILE SEQRES 14 C 184 LYS LEU GLU ASN TYR PHE GLU GLU LEU LEU LYS ASN LEU SEQRES 15 C 184 TYR PRO SEQRES 1 D 184 SER PRO ASN GLU ASP TRP CYS ALA VAL CYS GLN ASN GLY SEQRES 2 D 184 GLY GLU LEU LEU CYS CYS GLU LYS CYS PRO LYS VAL PHE SEQRES 3 D 184 HIS LEU SER CYS HIS VAL PRO THR LEU THR ASN PHE PRO SEQRES 4 D 184 SER GLY GLU TRP ILE CYS THR PHE CYS ARG ASP LEU SER SEQRES 5 D 184 LYS PRO GLU VAL GLU TYR ASP CYS ASP ALA PRO SER HIS SEQRES 6 D 184 ASN SER GLU LYS LYS LYS THR GLU GLY LEU VAL LYS LEU SEQRES 7 D 184 THR PRO ILE ASP LYS ARG LYS CYS GLU ARG LEU LEU LEU SEQRES 8 D 184 PHE LEU TYR CYS HIS GLU MET SER LEU ALA PHE GLN ASP SEQRES 9 D 184 PRO VAL PRO LEU THR VAL PRO ASP TYR TYR LYS ILE ILE SEQRES 10 D 184 LYS ASN PRO MET ASP LEU SER THR ILE LYS LYS ARG LEU SEQRES 11 D 184 GLN GLU ASP TYR SER MET TYR SER LYS PRO GLU ASP PHE SEQRES 12 D 184 VAL ALA ASP PHE ARG LEU ILE PHE GLN ASN CYS ALA GLU SEQRES 13 D 184 PHE ASN GLU PRO ASP SER GLU VAL ALA ASN ALA GLY ILE SEQRES 14 D 184 LYS LEU GLU ASN TYR PHE GLU GLU LEU LEU LYS ASN LEU SEQRES 15 D 184 TYR PRO HET ZN A 1 1 HET ZN A 2 1 HET ZN B 1 1 HET ZN B 2 1 HET ZN C 1 1 HET ZN C 2 1 HET ZN D 1 1 HET ZN D 2 1 HETNAM ZN ZINC ION FORMUL 5 ZN 8(ZN 2+) FORMUL 13 HOH *242(H2 O) HELIX 1 1 THR A 901 HIS A 918 1 18 HELIX 2 2 GLU A 919 GLN A 925 5 7 HELIX 3 3 ASP A 934 ILE A 939 1 6 HELIX 4 4 ASP A 944 GLU A 954 1 11 HELIX 5 5 LYS A 961 ASN A 980 1 20 HELIX 6 6 SER A 984 TYR A 1005 1 22 HELIX 7 7 TYR B 880 ALA B 884 5 5 HELIX 8 8 THR B 901 HIS B 918 1 18 HELIX 9 9 SER B 921 GLN B 925 5 5 HELIX 10 10 ASP B 934 ILE B 939 1 6 HELIX 11 11 ASP B 944 GLU B 954 1 11 HELIX 12 12 LYS B 961 ASN B 980 1 20 HELIX 13 13 SER B 984 TYR B 1005 1 22 HELIX 14 14 TYR C 880 ALA C 884 5 5 HELIX 15 15 THR C 901 HIS C 918 1 18 HELIX 16 16 SER C 921 ASP C 926 1 6 HELIX 17 17 ASP C 934 ILE C 939 1 6 HELIX 18 18 ASP C 944 GLU C 954 1 11 HELIX 19 19 LYS C 961 ASN C 980 1 20 HELIX 20 20 SER C 984 TYR C 1005 1 22 HELIX 21 21 THR D 901 HIS D 918 1 18 HELIX 22 22 GLU D 919 GLN D 925 5 7 HELIX 23 23 ASP D 934 ILE D 939 1 6 HELIX 24 24 ASP D 944 GLU D 954 1 11 HELIX 25 25 LYS D 961 ASN D 980 1 20 HELIX 26 26 SER D 984 TYR D 1005 1 22 SHEET 1 A 2 LEU A 839 CYS A 840 0 SHEET 2 A 2 VAL A 847 PHE A 848 -1 O PHE A 848 N LEU A 839 SHEET 1 B 2 LEU B 839 CYS B 840 0 SHEET 2 B 2 VAL B 847 PHE B 848 -1 O PHE B 848 N LEU B 839 SHEET 1 C 2 LEU C 839 CYS C 840 0 SHEET 2 C 2 VAL C 847 PHE C 848 -1 O PHE C 848 N LEU C 839 SHEET 1 D 2 LEU D 839 CYS D 840 0 SHEET 2 D 2 VAL D 847 PHE D 848 -1 O PHE D 848 N LEU D 839 LINK ZN ZN A 1 SG CYS A 829 1555 1555 2.30 LINK ZN ZN A 1 SG CYS A 832 1555 1555 2.25 LINK ZN ZN A 1 ND1 HIS A 849 1555 1555 2.16 LINK ZN ZN A 1 SG CYS A 852 1555 1555 2.26 LINK ZN ZN A 2 SG CYS A 841 1555 1555 2.19 LINK ZN ZN A 2 SG CYS A 844 1555 1555 2.45 LINK ZN ZN A 2 SG CYS A 867 1555 1555 2.52 LINK ZN ZN A 2 SG CYS A 870 1555 1555 2.08 LINK ZN ZN B 1 SG CYS B 829 1555 1555 2.23 LINK ZN ZN B 1 SG CYS B 832 1555 1555 2.38 LINK ZN ZN B 1 ND1 HIS B 849 1555 1555 2.15 LINK ZN ZN B 1 SG CYS B 852 1555 1555 2.27 LINK ZN ZN B 2 SG CYS B 841 1555 1555 2.25 LINK ZN ZN B 2 SG CYS B 844 1555 1555 2.32 LINK ZN ZN B 2 SG CYS B 867 1555 1555 2.45 LINK ZN ZN B 2 SG CYS B 870 1555 1555 2.13 LINK ZN ZN C 1 SG CYS C 841 1555 1555 2.28 LINK ZN ZN C 1 SG CYS C 844 1555 1555 2.37 LINK ZN ZN C 1 SG CYS C 867 1555 1555 2.39 LINK ZN ZN C 1 SG CYS C 870 1555 1555 2.19 LINK ZN ZN C 2 SG CYS C 829 1555 1555 2.23 LINK ZN ZN C 2 SG CYS C 832 1555 1555 2.35 LINK ZN ZN C 2 ND1 HIS C 849 1555 1555 2.07 LINK ZN ZN C 2 SG CYS C 852 1555 1555 2.33 LINK ZN ZN D 1 SG CYS D 829 1555 1555 2.36 LINK ZN ZN D 1 SG CYS D 832 1555 1555 2.19 LINK ZN ZN D 1 ND1 HIS D 849 1555 1555 2.05 LINK ZN ZN D 1 SG CYS D 852 1555 1555 2.32 LINK ZN ZN D 2 SG CYS D 841 1555 1555 2.15 LINK ZN ZN D 2 SG CYS D 844 1555 1555 2.37 LINK ZN ZN D 2 SG CYS D 867 1555 1555 2.47 LINK ZN ZN D 2 SG CYS D 870 1555 1555 2.13 CISPEP 1 VAL A 854 PRO A 855 0 0.13 CISPEP 2 VAL B 854 PRO B 855 0 0.14 CISPEP 3 VAL C 854 PRO C 855 0 -0.01 CISPEP 4 VAL D 854 PRO D 855 0 -0.08 SITE 1 AC1 4 CYS A 829 CYS A 832 HIS A 849 CYS A 852 SITE 1 AC2 4 CYS A 841 CYS A 844 CYS A 867 CYS A 870 SITE 1 AC3 4 CYS B 829 CYS B 832 HIS B 849 CYS B 852 SITE 1 AC4 4 CYS B 841 CYS B 844 CYS B 867 CYS B 870 SITE 1 AC5 4 CYS C 841 CYS C 844 CYS C 867 CYS C 870 SITE 1 AC6 4 CYS C 829 CYS C 832 HIS C 849 CYS C 852 SITE 1 AC7 4 CYS D 829 CYS D 832 HIS D 849 CYS D 852 SITE 1 AC8 4 CYS D 841 CYS D 844 CYS D 867 CYS D 870 CRYST1 36.482 48.498 122.729 86.45 81.46 67.84 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027411 -0.011164 -0.004044 0.00000 SCALE2 0.000000 0.022264 -0.000144 0.00000 SCALE3 0.000000 0.000000 0.008240 0.00000