PDB Short entry for 3OB2 HEADER LIGASE/SIGNALING PROTEIN 06-AUG-10 3OB2 TITLE CRYSTAL STRUCTURE OF C-CBL TKB DOMAIN IN COMPLEX WITH DOUBLE TITLE 2 PHOSPHORYLATED EGFR PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 12-MERIC PEPTIDE FROM EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1063-1074; COMPND 5 SYNONYM: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-1, PROTO-ONCOGENE C- COMPND 6 ERBB-1; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: DOUBLE PHOSPHORYLATED EGFR PEPTIDE; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE CBL; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: C-CBL TKB DOMAIN, RESIDUES 25-351; COMPND 13 SYNONYM: SIGNAL TRANSDUCTION PROTEIN CBL, PROTO-ONCOGENE C-CBL, COMPND 14 CASITAS B-LINEAGE LYMPHOMA PROTO-ONCOGENE, RING FINGER PROTEIN 55; COMPND 15 EC: 6.3.2.-; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606; SOURCE 6 OTHER_DETAILS: SYNTHETIC PEPTIDE; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 15 EXPRESSION_SYSTEM_PLASMID: PGEX-4T-1 KEYWDS PROTEIN-PEPTIDE COMPLEX, DOUBLE PHOSPHORYLATION, LIGASE-SIGNALING KEYWDS 2 PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Q.SUN,J.SIVARAMAN REVDAT 6 06-DEC-23 3OB2 1 REMARK REVDAT 5 01-NOV-23 3OB2 1 SEQADV LINK REVDAT 4 08-NOV-17 3OB2 1 REMARK REVDAT 3 13-OCT-10 3OB2 1 JRNL REVDAT 2 06-OCT-10 3OB2 1 JRNL REVDAT 1 18-AUG-10 3OB2 0 JRNL AUTH Q.SUN,R.A.JACKSON,C.NG,G.R.GUY,J.SIVARAMAN JRNL TITL ADDITIONAL SERINE/THREONINE PHOSPHORYLATION REDUCES BINDING JRNL TITL 2 AFFINITY BUT PRESERVES INTERFACE TOPOGRAPHY OF SUBSTRATE JRNL TITL 3 PROTEINS TO THE C-CBL TKB DOMAIN JRNL REF PLOS ONE V. 5 12819 2010 JRNL REFN ESSN 1932-6203 JRNL PMID 20877636 JRNL DOI 10.1371/JOURNAL.PONE.0012819 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 27981 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1425 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1937 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.36 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2534 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 314 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.86000 REMARK 3 B22 (A**2) : -0.86000 REMARK 3 B33 (A**2) : 1.29000 REMARK 3 B12 (A**2) : -0.43000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.152 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.264 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2602 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3518 ; 1.642 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 305 ; 5.712 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;36.610 ;23.306 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 465 ;17.406 ;15.032 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;21.220 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 373 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1966 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1535 ; 0.955 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2485 ; 1.842 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1067 ; 2.904 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1033 ; 4.714 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: REFINED INDIVIDUALLY REMARK 4 REMARK 4 3OB2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000060890. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER PROTEUM X8 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER AXS MICROSTAR REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30870 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.39900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3BUM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 3350, 150MM NAK REMARK 280 TARTRATE, 0.1 M BIS-TRIS PROPANE PH 6.1, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 303 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1063 REMARK 465 GLY B 23 REMARK 465 SER B 24 REMARK 465 LEU B 25 REMARK 465 ILE B 26 REMARK 465 GLY B 27 REMARK 465 LEU B 28 REMARK 465 MET B 29 REMARK 465 LYS B 30 REMARK 465 ASP B 31 REMARK 465 ALA B 32 REMARK 465 PHE B 33 REMARK 465 GLN B 34 REMARK 465 PRO B 35 REMARK 465 HIS B 36 REMARK 465 HIS B 37 REMARK 465 HIS B 38 REMARK 465 HIS B 39 REMARK 465 HIS B 40 REMARK 465 HIS B 41 REMARK 465 HIS B 42 REMARK 465 LEU B 43 REMARK 465 SER B 44 REMARK 465 PRO B 45 REMARK 465 HIS B 46 REMARK 465 PRO B 47 REMARK 465 PRO B 48 REMARK 465 GLY B 49 REMARK 465 THR B 50 REMARK 465 VAL B 51 REMARK 465 ASP B 52 REMARK 465 LYS B 53 REMARK 465 LYS B 54 REMARK 465 GLY B 351 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 68 O HOH B 480 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 311 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 343 NE - CZ - NH1 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 343 NE - CZ - NH2 ANGL. DEV. = 4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A1068 -101.88 -134.32 REMARK 500 LYS B 105 35.79 -60.17 REMARK 500 LYS B 137 -117.04 41.31 REMARK 500 ASN B 144 -5.54 82.03 REMARK 500 PHE B 169 62.87 -114.38 REMARK 500 ASP B 234 16.94 54.43 REMARK 500 ALA B 262 -44.40 -133.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OB1 RELATED DB: PDB REMARK 900 C-CBL TKB DOMAIN IN COMPLEX WITH DOUBLE PHOSPHORYLATED SPRY2 PEPTIDE DBREF 3OB2 A 1063 1074 UNP P00533 EGFR_HUMAN 1063 1074 DBREF 3OB2 B 25 351 UNP P22681 CBL_HUMAN 25 351 SEQADV 3OB2 GLY B 23 UNP P22681 EXPRESSION TAG SEQADV 3OB2 SER B 24 UNP P22681 EXPRESSION TAG SEQRES 1 A 12 ASP SER PHE LEU GLN ARG PTR SEP SER ASP PRO THR SEQRES 1 B 329 GLY SER LEU ILE GLY LEU MET LYS ASP ALA PHE GLN PRO SEQRES 2 B 329 HIS HIS HIS HIS HIS HIS HIS LEU SER PRO HIS PRO PRO SEQRES 3 B 329 GLY THR VAL ASP LYS LYS MET VAL GLU LYS CYS TRP LYS SEQRES 4 B 329 LEU MET ASP LYS VAL VAL ARG LEU CYS GLN ASN PRO LYS SEQRES 5 B 329 LEU ALA LEU LYS ASN SER PRO PRO TYR ILE LEU ASP LEU SEQRES 6 B 329 LEU PRO ASP THR TYR GLN HIS LEU ARG THR ILE LEU SER SEQRES 7 B 329 ARG TYR GLU GLY LYS MET GLU THR LEU GLY GLU ASN GLU SEQRES 8 B 329 TYR PHE ARG VAL PHE MET GLU ASN LEU MET LYS LYS THR SEQRES 9 B 329 LYS GLN THR ILE SER LEU PHE LYS GLU GLY LYS GLU ARG SEQRES 10 B 329 MET TYR GLU GLU ASN SER GLN PRO ARG ARG ASN LEU THR SEQRES 11 B 329 LYS LEU SER LEU ILE PHE SER HIS MET LEU ALA GLU LEU SEQRES 12 B 329 LYS GLY ILE PHE PRO SER GLY LEU PHE GLN GLY ASP THR SEQRES 13 B 329 PHE ARG ILE THR LYS ALA ASP ALA ALA GLU PHE TRP ARG SEQRES 14 B 329 LYS ALA PHE GLY GLU LYS THR ILE VAL PRO TRP LYS SER SEQRES 15 B 329 PHE ARG GLN ALA LEU HIS GLU VAL HIS PRO ILE SER SER SEQRES 16 B 329 GLY LEU GLU ALA MET ALA LEU LYS SER THR ILE ASP LEU SEQRES 17 B 329 THR CYS ASN ASP TYR ILE SER VAL PHE GLU PHE ASP ILE SEQRES 18 B 329 PHE THR ARG LEU PHE GLN PRO TRP SER SER LEU LEU ARG SEQRES 19 B 329 ASN TRP ASN SER LEU ALA VAL THR HIS PRO GLY TYR MET SEQRES 20 B 329 ALA PHE LEU THR TYR ASP GLU VAL LYS ALA ARG LEU GLN SEQRES 21 B 329 LYS PHE ILE HIS LYS PRO GLY SER TYR ILE PHE ARG LEU SEQRES 22 B 329 SER CYS THR ARG LEU GLY GLN TRP ALA ILE GLY TYR VAL SEQRES 23 B 329 THR ALA ASP GLY ASN ILE LEU GLN THR ILE PRO HIS ASN SEQRES 24 B 329 LYS PRO LEU PHE GLN ALA LEU ILE ASP GLY PHE ARG GLU SEQRES 25 B 329 GLY PHE TYR LEU PHE PRO ASP GLY ARG ASN GLN ASN PRO SEQRES 26 B 329 ASP LEU THR GLY MODRES 3OB2 PTR A 1069 TYR O-PHOSPHOTYROSINE MODRES 3OB2 SEP A 1070 SER PHOSPHOSERINE HET PTR A1069 16 HET SEP A1070 10 HETNAM PTR O-PHOSPHOTYROSINE HETNAM SEP PHOSPHOSERINE HETSYN PTR PHOSPHONOTYROSINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 PTR C9 H12 N O6 P FORMUL 1 SEP C3 H8 N O6 P FORMUL 3 HOH *314(H2 O) HELIX 1 1 MET B 55 GLN B 71 1 17 HELIX 2 2 ASN B 72 ALA B 76 5 5 HELIX 3 3 TYR B 83 TYR B 102 1 20 HELIX 4 4 LYS B 105 ASN B 112 1 8 HELIX 5 5 ASN B 112 LYS B 137 1 26 HELIX 6 6 GLU B 138 TYR B 141 5 4 HELIX 7 7 SER B 145 PHE B 169 1 25 HELIX 8 8 PRO B 170 LEU B 173 5 4 HELIX 9 9 GLN B 175 PHE B 179 5 5 HELIX 10 10 LYS B 183 GLY B 195 1 13 HELIX 11 11 TRP B 202 HIS B 213 1 12 HELIX 12 12 SER B 217 ASP B 229 1 13 HELIX 13 13 VAL B 238 PHE B 248 1 11 HELIX 14 14 PRO B 250 SER B 252 5 3 HELIX 15 15 SER B 253 ALA B 262 1 10 HELIX 16 16 THR B 273 LYS B 283 1 11 HELIX 17 17 PRO B 323 GLU B 334 1 12 SHEET 1 A 2 ILE B 199 PRO B 201 0 SHEET 2 A 2 TYR B 235 SER B 237 -1 O ILE B 236 N VAL B 200 SHEET 1 B 4 ILE B 314 THR B 317 0 SHEET 2 B 4 TRP B 303 VAL B 308 -1 N ILE B 305 O THR B 317 SHEET 3 B 4 SER B 290 LEU B 295 -1 N ILE B 292 O GLY B 306 SHEET 4 B 4 PHE B 339 PRO B 340 1 O PHE B 339 N TYR B 291 LINK C ARG A1068 N PTR A1069 1555 1555 1.34 LINK C PTR A1069 N SEP A1070 1555 1555 1.31 LINK C SEP A1070 N SER A1071 1555 1555 1.31 CISPEP 1 PRO B 81 PRO B 82 0 2.16 CISPEP 2 GLN B 249 PRO B 250 0 3.71 CRYST1 122.771 122.771 55.425 90.00 90.00 120.00 P 6 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008145 0.004703 0.000000 0.00000 SCALE2 0.000000 0.009405 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018042 0.00000