PDB Short entry for 3OG6 HEADER CYTOKINE/CYTOKINE RECEPTOR 16-AUG-10 3OG6 TITLE THE CRYSTAL STRUCTURE OF HUMAN INTERFERON LAMBDA 1 COMPLEXED WITH ITS TITLE 2 HIGH AFFINITY RECEPTOR IN SPACE GROUP P212121 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-29; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IL-29, INTERFERON LAMBDA-1, IFN-LAMBDA-1, CYTOKINE ZCYTO21; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: INTERLEUKIN 28 RECEPTOR, ALPHA (INTERFERON, LAMBDA COMPND 9 RECEPTOR); COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: EXTRACELLULAR DOMAIN (UNP RESIDUE 19-226); COMPND 12 SYNONYM: INTERLEUKIN 28 RECEPTOR, ALPHA (INTERFERON, LAMBDA COMPND 13 RECEPTOR), ISOFORM CRA_E; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IFNL1, IL29, ZCYTO21; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: S2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMT/BIP/V5-HIS; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: HCG_1982865, IL28RA, RP11-10N16.1-001; SOURCE 16 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: S2; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PMT/BIP/V5-HIS KEYWDS HELICAL BUNDLE, FIBRONECTIN TYPE III DOMAIN, BETA-SANDWICH, CYTOKINE KEYWDS 2 SIGNALING, MEMBRANE, CYTOKINE-CYTOKINE RECEPTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Z.J.MIKNIS,E.MAGRACHEVA,W.LEI,A.ZDANOV,S.V.KOTENKO,A.WLODAWER REVDAT 4 06-SEP-23 3OG6 1 HETSYN REVDAT 3 29-JUL-20 3OG6 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 03-JUL-13 3OG6 1 JRNL VERSN REVDAT 1 20-OCT-10 3OG6 0 JRNL AUTH Z.J.MIKNIS,E.MAGRACHEVA,W.LI,A.ZDANOV,S.V.KOTENKO,A.WLODAWER JRNL TITL CRYSTAL STRUCTURE OF THE COMPLEX OF HUMAN INTERFERON-LAMBDA1 JRNL TITL 2 WITH ITS HIGH AFFINITY RECEPTOR INTERFERON-LAMBDAR1. JRNL REF J.MOL.BIOL. V. 404 650 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20934432 JRNL DOI 10.1016/J.JMB.2010.09.068 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 3 NUMBER OF REFLECTIONS : 34990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1054 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.3962 - 4.1906 1.00 4934 143 0.1847 0.2171 REMARK 3 2 4.1906 - 3.3277 0.99 4741 140 0.1531 0.1888 REMARK 3 3 3.3277 - 2.9075 0.98 4633 132 0.1631 0.2041 REMARK 3 4 2.9075 - 2.6419 0.96 4506 125 0.1633 0.2180 REMARK 3 5 2.6419 - 2.4526 0.93 4286 169 0.1597 0.2043 REMARK 3 6 2.4526 - 2.3081 0.88 4135 132 0.1850 0.2225 REMARK 3 7 2.3081 - 2.1925 0.80 3686 110 0.2362 0.3404 REMARK 3 8 2.1925 - 2.0971 0.65 3015 103 0.2988 0.3638 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 70.79 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 1.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.49370 REMARK 3 B22 (A**2) : 10.26300 REMARK 3 B33 (A**2) : -5.76930 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 5713 REMARK 3 ANGLE : 1.226 10339 REMARK 3 CHIRALITY : 0.123 448 REMARK 3 PLANARITY : 0.007 827 REMARK 3 DIHEDRAL : 15.038 1448 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 25.1196 66.4369 61.6839 REMARK 3 T TENSOR REMARK 3 T11: 0.1971 T22: 0.2504 REMARK 3 T33: 0.1727 T12: 0.0091 REMARK 3 T13: 0.0196 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 3.3074 L22: 1.5139 REMARK 3 L33: 1.8636 L12: 0.5438 REMARK 3 L13: 0.5812 L23: 0.1419 REMARK 3 S TENSOR REMARK 3 S11: 0.0178 S12: -0.0993 S13: 0.1906 REMARK 3 S21: 0.0427 S22: -0.0317 S23: 0.0678 REMARK 3 S31: -0.0599 S32: 0.1198 S33: 0.0182 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 31.4178 43.4761 77.1625 REMARK 3 T TENSOR REMARK 3 T11: 0.2990 T22: 0.3220 REMARK 3 T33: 0.4013 T12: 0.0680 REMARK 3 T13: 0.0147 T23: 0.1291 REMARK 3 L TENSOR REMARK 3 L11: 0.3142 L22: 2.0908 REMARK 3 L33: 3.6354 L12: 0.5716 REMARK 3 L13: -0.2670 L23: -2.5183 REMARK 3 S TENSOR REMARK 3 S11: -0.0478 S12: -0.1718 S13: -0.2752 REMARK 3 S21: -0.1359 S22: -0.0024 S23: -0.3016 REMARK 3 S31: 0.2979 S32: -0.0510 S33: 0.0180 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3OG6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000061074. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : ROSENBAUM-ROCK MONOCHROMATOR REMARK 200 HIGH-RESOLUTION DOUBLE-CRYSTAL REMARK 200 SI(220) SAGITTAL FOCUSING, REMARK 200 ROSENBAUM-ROCK VERTICAL FOCUSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37819 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.84000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3HHC AND PDB ENTRY 3G9V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% MPEG 2000, 100 MM TRIS-HCL PH 7.9, REMARK 280 200 MM TRIMETHYAMINE N-OXIDE DEHYDRATE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.48000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.25500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.89500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.25500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.48000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.89500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 ASP A -8 REMARK 465 TYR A -7 REMARK 465 LYS A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 ASP A -2 REMARK 465 LYS A -1 REMARK 465 ALA A 0 REMARK 465 ASP A 1 REMARK 465 PRO A 2 REMARK 465 VAL A 3 REMARK 465 PRO A 4 REMARK 465 THR A 5 REMARK 465 SER A 6 REMARK 465 LYS A 7 REMARK 465 PRO A 8 REMARK 465 THR A 9 REMARK 465 PRO A 10 REMARK 465 THR A 11 REMARK 465 GLY A 12 REMARK 465 LYS A 13 REMARK 465 GLY A 14 REMARK 465 CYS A 15 REMARK 465 HIS A 16 REMARK 465 ILE A 17 REMARK 465 GLY A 18 REMARK 465 ARG A 19 REMARK 465 PHE A 20 REMARK 465 LYS A 21 REMARK 465 GLN A 116 REMARK 465 PRO A 117 REMARK 465 THR A 118 REMARK 465 ALA A 119 REMARK 465 GLY A 120 REMARK 465 PRO A 121 REMARK 465 CYS A 171 REMARK 465 LEU A 172 REMARK 465 ARG A 173 REMARK 465 THR A 174 REMARK 465 SER A 175 REMARK 465 THR A 176 REMARK 465 HIS A 177 REMARK 465 PRO A 178 REMARK 465 GLU A 179 REMARK 465 SER A 180 REMARK 465 THR A 181 REMARK 465 PRO B -1 REMARK 465 GLY B 0 REMARK 465 ARG B 1 REMARK 465 PRO B 2 REMARK 465 ARG B 3 REMARK 465 GLU B 204 REMARK 465 ALA B 205 REMARK 465 ASN B 206 REMARK 465 ALA B 207 REMARK 465 SER B 208 REMARK 465 GLY B 209 REMARK 465 SER B 210 REMARK 465 SER B 211 REMARK 465 GLY B 212 REMARK 465 GLY B 213 REMARK 465 SER B 214 REMARK 465 SER B 215 REMARK 465 GLY B 216 REMARK 465 THR B 217 REMARK 465 SER B 218 REMARK 465 HIS B 219 REMARK 465 HIS B 220 REMARK 465 HIS B 221 REMARK 465 HIS B 222 REMARK 465 HIS B 223 REMARK 465 HIS B 224 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 114 CG CD OE1 NE2 REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 170 CG CD1 CD2 REMARK 470 VAL B 80 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 9 O5 NAG B 300 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 96 O HOH B 283 4466 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 59 116.00 -173.18 REMARK 500 PRO B 30 174.57 -52.35 REMARK 500 ARG B 45 65.58 -152.87 REMARK 500 ARG B 47 135.76 -177.16 REMARK 500 ARG B 47 143.23 178.11 REMARK 500 SER B 87 161.58 176.05 REMARK 500 GLU B 116 -120.54 58.38 REMARK 500 ALA B 170 51.89 -97.34 REMARK 500 PHE B 184 -87.59 -101.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HHC RELATED DB: PDB REMARK 900 INTERFERON LAMBDA 3 REMARK 900 RELATED ID: 3G9V RELATED DB: PDB REMARK 900 IL-22 BINDING PROTEIN REMARK 900 RELATED ID: 3OG4 RELATED DB: PDB REMARK 900 COMPLEX OF INTERFERON LAMBDA 1 WITH INTERFERON LAMBDA RECEPTOR 1 DBREF 3OG6 A 1 181 UNP Q8IU54 IL29_HUMAN 20 200 DBREF 3OG6 B -1 206 UNP Q5VTX7 Q5VTX7_HUMAN 19 226 SEQADV 3OG6 HIS A -14 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 HIS A -13 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 HIS A -12 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 HIS A -11 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 HIS A -10 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 HIS A -9 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 ASP A -8 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 TYR A -7 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 LYS A -6 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 ASP A -5 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 ASP A -4 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 ASP A -3 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 ASP A -2 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 LYS A -1 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 ALA A 0 UNP Q8IU54 EXPRESSION TAG SEQADV 3OG6 ASP A 1 UNP Q8IU54 GLY 20 ENGINEERED MUTATION SEQADV 3OG6 PRO A 10 UNP Q8IU54 THR 29 ENGINEERED MUTATION SEQADV 3OG6 ALA B 207 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 SER B 208 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 GLY B 209 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 SER B 210 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 SER B 211 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 GLY B 212 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 GLY B 213 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 SER B 214 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 SER B 215 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 GLY B 216 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 THR B 217 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 SER B 218 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 HIS B 219 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 HIS B 220 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 HIS B 221 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 HIS B 222 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 HIS B 223 UNP Q5VTX7 EXPRESSION TAG SEQADV 3OG6 HIS B 224 UNP Q5VTX7 EXPRESSION TAG SEQRES 1 A 196 HIS HIS HIS HIS HIS HIS ASP TYR LYS ASP ASP ASP ASP SEQRES 2 A 196 LYS ALA ASP PRO VAL PRO THR SER LYS PRO THR PRO THR SEQRES 3 A 196 GLY LYS GLY CYS HIS ILE GLY ARG PHE LYS SER LEU SER SEQRES 4 A 196 PRO GLN GLU LEU ALA SER PHE LYS LYS ALA ARG ASP ALA SEQRES 5 A 196 LEU GLU GLU SER LEU LYS LEU LYS ASN TRP SER CYS SER SEQRES 6 A 196 SER PRO VAL PHE PRO GLY ASN TRP ASP LEU ARG LEU LEU SEQRES 7 A 196 GLN VAL ARG GLU ARG PRO VAL ALA LEU GLU ALA GLU LEU SEQRES 8 A 196 ALA LEU THR LEU LYS VAL LEU GLU ALA ALA ALA GLY PRO SEQRES 9 A 196 ALA LEU GLU ASP VAL LEU ASP GLN PRO LEU HIS THR LEU SEQRES 10 A 196 HIS HIS ILE LEU SER GLN LEU GLN ALA CYS ILE GLN PRO SEQRES 11 A 196 GLN PRO THR ALA GLY PRO ARG PRO ARG GLY ARG LEU HIS SEQRES 12 A 196 HIS TRP LEU HIS ARG LEU GLN GLU ALA PRO LYS LYS GLU SEQRES 13 A 196 SER ALA GLY CYS LEU GLU ALA SER VAL THR PHE ASN LEU SEQRES 14 A 196 PHE ARG LEU LEU THR ARG ASP LEU LYS TYR VAL ALA ASP SEQRES 15 A 196 GLY ASN LEU CYS LEU ARG THR SER THR HIS PRO GLU SER SEQRES 16 A 196 THR SEQRES 1 B 226 PRO GLY ARG PRO ARG LEU ALA PRO PRO GLN ASN VAL THR SEQRES 2 B 226 LEU LEU SER GLN ASN PHE SER VAL TYR LEU THR TRP LEU SEQRES 3 B 226 PRO GLY LEU GLY ASN PRO GLN ASP VAL THR TYR PHE VAL SEQRES 4 B 226 ALA TYR GLN SER SER PRO THR ARG ARG ARG TRP ARG GLU SEQRES 5 B 226 VAL GLU GLU CYS ALA GLY THR LYS GLU LEU LEU CYS SER SEQRES 6 B 226 MET MET CYS LEU LYS LYS GLN ASP LEU TYR ASN LYS PHE SEQRES 7 B 226 LYS GLY ARG VAL ARG THR VAL SER PRO SER SER LYS SER SEQRES 8 B 226 PRO TRP VAL GLU SER GLU TYR LEU ASP TYR LEU PHE GLU SEQRES 9 B 226 VAL GLU PRO ALA PRO PRO VAL LEU VAL LEU THR GLN THR SEQRES 10 B 226 GLU GLU ILE LEU SER ALA ASN ALA THR TYR GLN LEU PRO SEQRES 11 B 226 PRO CYS MET PRO PRO LEU ASP LEU LYS TYR GLU VAL ALA SEQRES 12 B 226 PHE TRP LYS GLU GLY ALA GLY ASN LYS THR LEU PHE PRO SEQRES 13 B 226 VAL THR PRO HIS GLY GLN PRO VAL GLN ILE THR LEU GLN SEQRES 14 B 226 PRO ALA ALA SER GLU HIS HIS CYS LEU SER ALA ARG THR SEQRES 15 B 226 ILE TYR THR PHE SER VAL PRO LYS TYR SER LYS PHE SER SEQRES 16 B 226 LYS PRO THR CYS PHE LEU LEU GLU VAL PRO GLU ALA ASN SEQRES 17 B 226 ALA SER GLY SER SER GLY GLY SER SER GLY THR SER HIS SEQRES 18 B 226 HIS HIS HIS HIS HIS MODRES 3OG6 ASN B 122 ASN GLYCOSYLATION SITE MODRES 3OG6 ASN B 9 ASN GLYCOSYLATION SITE MODRES 3OG6 ASN B 16 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET GOL A 182 6 HET GOL A 183 6 HET NAG B 300 14 HET NAG B 304 14 HET GOL B 225 6 HET GOL B 226 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 4 GOL 4(C3 H8 O3) FORMUL 10 HOH *266(H2 O) HELIX 1 1 SER A 24 LYS A 43 1 20 HELIX 2 2 ASP A 59 LEU A 63 5 5 HELIX 3 3 GLN A 64 ARG A 66 5 3 HELIX 4 4 GLU A 67 ALA A 87 1 21 HELIX 5 5 LEU A 91 ALA A 111 1 21 HELIX 6 6 GLY A 125 GLU A 141 1 17 HELIX 7 7 SER A 142 ARG A 160 1 19 HELIX 8 8 ARG A 160 GLY A 168 1 9 HELIX 9 9 GLU B 52 ALA B 55 5 4 HELIX 10 10 ASP B 98 VAL B 103 1 6 SHEET 1 A 3 GLN B 8 GLN B 15 0 SHEET 2 A 3 SER B 18 LEU B 24 -1 O LEU B 24 N GLN B 8 SHEET 3 A 3 LEU B 61 SER B 63 -1 O CYS B 62 N LEU B 21 SHEET 1 B 4 TRP B 48 GLU B 50 0 SHEET 2 B 4 THR B 34 GLN B 40 -1 N TYR B 39 O ARG B 49 SHEET 3 B 4 GLY B 78 SER B 84 -1 O VAL B 83 N THR B 34 SHEET 4 B 4 SER B 87 LYS B 88 -1 O SER B 87 N SER B 84 SHEET 1 C 4 TRP B 48 GLU B 50 0 SHEET 2 C 4 THR B 34 GLN B 40 -1 N TYR B 39 O ARG B 49 SHEET 3 C 4 GLY B 78 SER B 84 -1 O VAL B 83 N THR B 34 SHEET 4 C 4 VAL B 92 GLU B 93 -1 O VAL B 92 N VAL B 80 SHEET 1 D 3 VAL B 109 THR B 115 0 SHEET 2 D 3 ILE B 118 THR B 124 -1 O ASN B 122 N VAL B 111 SHEET 3 D 3 PRO B 161 THR B 165 -1 O ILE B 164 N LEU B 119 SHEET 1 E 4 THR B 151 LEU B 152 0 SHEET 2 E 4 LEU B 136 LYS B 144 -1 N PHE B 142 O THR B 151 SHEET 3 E 4 HIS B 173 THR B 183 -1 O SER B 177 N ALA B 141 SHEET 4 E 4 PRO B 187 TYR B 189 -1 O LYS B 188 N TYR B 182 SHEET 1 F 4 THR B 156 PRO B 157 0 SHEET 2 F 4 LEU B 136 LYS B 144 -1 N TYR B 138 O THR B 156 SHEET 3 F 4 HIS B 173 THR B 183 -1 O SER B 177 N ALA B 141 SHEET 4 F 4 THR B 196 LEU B 199 -1 O THR B 196 N LEU B 176 SSBOND 1 CYS A 49 CYS A 145 1555 1555 2.11 SSBOND 2 CYS B 54 CYS B 62 1555 1555 2.09 SSBOND 3 CYS B 66 CYS B 130 1555 1555 2.14 SSBOND 4 CYS B 175 CYS B 197 1555 1555 2.17 LINK ND2 ASN B 9 C1 NAG B 300 1555 1555 1.42 LINK ND2 ASN B 16 C1 NAG B 304 1555 1555 1.48 LINK ND2 ASN B 122 C1 NAG C 1 1555 1555 1.51 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.47 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.46 CRYST1 64.960 85.790 116.510 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015394 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011656 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008583 0.00000