PDB Short entry for 3P6Z HEADER HYDROLASE/HYDROLASE INHIBITOR 11-OCT-10 3P6Z TITLE STRUCTURAL BASIS OF THROMBIN MEDIATED FACTOR V ACTIVATION: ESSENTIAL TITLE 2 ROLE OF THE HIRUDIN-LIKE SEQUENCE GLU666-GLU672 FOR PROCESSING AT THE TITLE 3 HEAVY CHAIN-B DOMAIN JUNCTION CAVEAT 3P6Z 0G6 B 707 HAS WRONG CHIRALITY AT ATOM C2 0G6 H 707 HAS WRONG CAVEAT 2 3P6Z CHIRALITY AT ATOM C2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: THROMBIN LIGHT CHAIN; COMPND 3 CHAIN: A, G; COMPND 4 FRAGMENT: THROMBIN LIGHT CHAIN; COMPND 5 SYNONYM: COAGULATION FACTOR II, THROMBIN LIGHT CHAIN; COMPND 6 EC: 3.4.21.5; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: THROMBIN HEAVY CHAIN; COMPND 9 CHAIN: B, H; COMPND 10 FRAGMENT: THROMBIN HEAVY CHAIN; COMPND 11 SYNONYM: COAGULATION FACTOR II, THROMBIN HEAVY CHAIN; COMPND 12 EC: 3.4.21.5; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: COAGULATION FACTOR V; COMPND 15 CHAIN: C, I; COMPND 16 FRAGMENT: FACTOR V, A2-B DOMAIN LINKER; COMPND 17 SYNONYM: ACTIVATED PROTEIN C COFACTOR; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 OTHER_DETAILS: PURIFIED FROM BLOOD PLASMA; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 OTHER_DETAILS: PURIFIED FROM BLOOD PLASMA; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: F5; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TRYPSIN-LIKE SERINE PROTEINASE, BLOOD COAGULATION, N-GLYCOSYLATION, KEYWDS 2 BLOOD PLASMA, PPACK, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.A.CORRAL-RODRIGUEZ,P.E.BOCK,E.HERNANDEZ-CARVAJAL,R.GUTIERREZ- AUTHOR 2 GALLEGO,P.FUENTES-PRIOR REVDAT 6 13-MAR-24 3P6Z 1 COMPND SOURCE REVDAT 5 06-SEP-23 3P6Z 1 HETSYN REVDAT 4 29-JUL-20 3P6Z 1 CAVEAT COMPND REMARK SEQADV REVDAT 4 2 1 HETNAM LINK SITE REVDAT 3 31-JAN-18 3P6Z 1 JRNL REVDAT 2 20-JUL-11 3P6Z 1 JRNL REVDAT 1 15-JUN-11 3P6Z 0 JRNL AUTH M.A.CORRAL-RODRIGUEZ,P.E.BOCK,E.HERNANDEZ-CARVAJAL, JRNL AUTH 2 R.GUTIERREZ-GALLEGO,P.FUENTES-PRIOR JRNL TITL STRUCTURAL BASIS OF THROMBIN-MEDIATED FACTOR V ACTIVATION: JRNL TITL 2 THE GLU666-GLU672 SEQUENCE IS CRITICAL FOR PROCESSING AT THE JRNL TITL 3 HEAVY CHAIN-B DOMAIN JUNCTION. JRNL REF BLOOD V. 117 7164 2011 JRNL REFN ISSN 0006-4971 JRNL PMID 21555742 JRNL DOI 10.1182/BLOOD-2010-10-315309 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 79739 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.500 REMARK 3 FREE R VALUE TEST SET COUNT : 2047 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5554 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.3690 REMARK 3 BIN FREE R VALUE SET COUNT : 156 REMARK 3 BIN FREE R VALUE : 0.4160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4733 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 505 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.109 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.082 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.335 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5039 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6796 ; 2.032 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 580 ; 7.349 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 245 ;33.072 ;23.224 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 904 ;16.216 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 47 ;15.686 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 699 ; 0.150 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3831 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2938 ; 1.300 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4753 ; 2.075 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2101 ; 3.166 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2043 ; 4.810 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 333 A 362 REMARK 3 ORIGIN FOR THE GROUP (A): 17.1625 28.6728 -35.4886 REMARK 3 T TENSOR REMARK 3 T11: 0.0312 T22: 0.1071 REMARK 3 T33: 0.0194 T12: -0.0237 REMARK 3 T13: -0.0236 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 4.2878 L22: 2.0050 REMARK 3 L33: 2.5511 L12: -1.0848 REMARK 3 L13: -0.4127 L23: 1.1497 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: 0.3822 S13: 0.0302 REMARK 3 S21: -0.2225 S22: 0.0097 S23: 0.1564 REMARK 3 S31: -0.0959 S32: -0.3269 S33: 0.0143 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 364 B 622 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2505 31.4844 -18.3296 REMARK 3 T TENSOR REMARK 3 T11: 0.0180 T22: 0.0143 REMARK 3 T33: 0.0020 T12: -0.0089 REMARK 3 T13: -0.0041 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.6857 L22: 1.2171 REMARK 3 L33: 1.8905 L12: 0.0315 REMARK 3 L13: -0.1304 L23: 0.1834 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: -0.0647 S13: -0.0175 REMARK 3 S21: 0.0994 S22: 0.0141 S23: -0.0476 REMARK 3 S31: -0.1179 S32: 0.1540 S33: -0.0015 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 334 G 362 REMARK 3 ORIGIN FOR THE GROUP (A): -4.5388 1.6036 15.8766 REMARK 3 T TENSOR REMARK 3 T11: 0.0370 T22: 0.0375 REMARK 3 T33: 0.0163 T12: -0.0010 REMARK 3 T13: 0.0242 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 3.6129 L22: 1.5470 REMARK 3 L33: 2.8384 L12: 0.5178 REMARK 3 L13: 0.5072 L23: 0.3208 REMARK 3 S TENSOR REMARK 3 S11: -0.0366 S12: -0.3020 S13: -0.0396 REMARK 3 S21: 0.2126 S22: -0.0212 S23: 0.1446 REMARK 3 S31: 0.1417 S32: -0.2191 S33: 0.0578 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3P6Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000062034. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9725 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81788 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 62.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1PPB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MOPS/HEPES-NA, PH 7.5, 12.5% REMARK 280 (W/V) PEG 1000, 12.5% (W/V) PEG 3350, 12.5% (V/V) 2- REMARK 280 METHYLPENTANE-2,4-DIOL (MPD), 30 MM CA2+, 30 MM MG2+, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 328 REMARK 465 PHE A 329 REMARK 465 GLY A 330 REMARK 465 SER A 331 REMARK 465 GLY A 332 REMARK 465 ARG A 363 REMARK 465 ASN B 514 REMARK 465 VAL B 515 REMARK 465 GLY B 516 REMARK 465 LYS B 517 REMARK 465 ALA C 639 REMARK 465 HIS C 640 REMARK 465 HIS C 641 REMARK 465 HIS C 642 REMARK 465 HIS C 643 REMARK 465 HIS C 644 REMARK 465 HIS C 645 REMARK 465 VAL C 646 REMARK 465 GLY C 647 REMARK 465 THR C 648 REMARK 465 TRP C 649 REMARK 465 GLU C 650 REMARK 465 ASN C 651 REMARK 465 LEU C 652 REMARK 465 TYR C 653 REMARK 465 PHE C 654 REMARK 465 GLN C 655 REMARK 465 SER C 656 REMARK 465 ILE C 657 REMARK 465 PRO C 658 REMARK 465 ASP C 659 REMARK 465 ASP C 660 REMARK 465 ASP C 661 REMARK 465 GLU C 662 REMARK 465 ASP C 663 REMARK 465 SER C 664 REMARK 465 TYR C 665 REMARK 465 SER C 673 REMARK 465 THR C 674 REMARK 465 VAL C 675 REMARK 465 MET C 676 REMARK 465 ALA C 677 REMARK 465 THR C 678 REMARK 465 ARG C 679 REMARK 465 LYS C 680 REMARK 465 MET C 681 REMARK 465 HIS C 682 REMARK 465 ASP C 683 REMARK 465 ARG C 684 REMARK 465 LEU C 685 REMARK 465 GLU C 686 REMARK 465 PRO C 687 REMARK 465 GLU C 688 REMARK 465 ASP C 689 REMARK 465 GLU C 690 REMARK 465 GLU C 691 REMARK 465 SER C 692 REMARK 465 ASP C 693 REMARK 465 ALA C 694 REMARK 465 ASP C 695 REMARK 465 TYR C 696 REMARK 465 ASP C 697 REMARK 465 TYR C 698 REMARK 465 GLN C 699 REMARK 465 ASN C 700 REMARK 465 ARG C 701 REMARK 465 LEU C 702 REMARK 465 ALA C 703 REMARK 465 ALA C 704 REMARK 465 ALA C 705 REMARK 465 LEU C 706 REMARK 465 GLY C 707 REMARK 465 ILE C 708 REMARK 465 ARG C 709 REMARK 465 THR G 328 REMARK 465 PHE G 329 REMARK 465 GLY G 330 REMARK 465 SER G 331 REMARK 465 GLY G 332 REMARK 465 GLU G 333 REMARK 465 ARG G 363 REMARK 465 ASN H 514 REMARK 465 VAL H 515 REMARK 465 GLY H 516 REMARK 465 LYS H 517 REMARK 465 ALA I 639 REMARK 465 HIS I 640 REMARK 465 HIS I 641 REMARK 465 HIS I 642 REMARK 465 HIS I 643 REMARK 465 HIS I 644 REMARK 465 HIS I 645 REMARK 465 VAL I 646 REMARK 465 GLY I 647 REMARK 465 THR I 648 REMARK 465 TRP I 649 REMARK 465 GLU I 650 REMARK 465 ASN I 651 REMARK 465 LEU I 652 REMARK 465 TYR I 653 REMARK 465 PHE I 654 REMARK 465 GLN I 655 REMARK 465 SER I 656 REMARK 465 ILE I 657 REMARK 465 PRO I 658 REMARK 465 ASP I 659 REMARK 465 ASP I 660 REMARK 465 ASP I 661 REMARK 465 GLU I 662 REMARK 465 ASP I 663 REMARK 465 SER I 664 REMARK 465 TYR I 665 REMARK 465 THR I 674 REMARK 465 VAL I 675 REMARK 465 MET I 676 REMARK 465 ALA I 677 REMARK 465 THR I 678 REMARK 465 ARG I 679 REMARK 465 LYS I 680 REMARK 465 MET I 681 REMARK 465 HIS I 682 REMARK 465 ASP I 683 REMARK 465 ARG I 684 REMARK 465 LEU I 685 REMARK 465 GLU I 686 REMARK 465 PRO I 687 REMARK 465 GLU I 688 REMARK 465 ASP I 689 REMARK 465 GLU I 690 REMARK 465 GLU I 691 REMARK 465 SER I 692 REMARK 465 ASP I 693 REMARK 465 ALA I 694 REMARK 465 ASP I 695 REMARK 465 TYR I 696 REMARK 465 ASP I 697 REMARK 465 TYR I 698 REMARK 465 GLN I 699 REMARK 465 ASN I 700 REMARK 465 ARG I 701 REMARK 465 LEU I 702 REMARK 465 ALA I 703 REMARK 465 ALA I 704 REMARK 465 ALA I 705 REMARK 465 LEU I 706 REMARK 465 GLY I 707 REMARK 465 ILE I 708 REMARK 465 ARG I 709 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 399 O HOH B 1214 1.99 REMARK 500 O HOH A 1046 O HOH A 1235 2.14 REMARK 500 OG SER B 568 O2 0G6 B 707 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 336 CB CYS A 336 SG 0.141 REMARK 500 CYS B 391 CB CYS B 391 SG -0.224 REMARK 500 VAL H 588 CB VAL H 588 CG2 0.128 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 391 CA - CB - SG ANGL. DEV. = 16.5 DEGREES REMARK 500 ARG B 399 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 425 NE - CZ - NH1 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG B 425 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG H 543 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ASP H 562 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 342 -84.88 -123.76 REMARK 500 TYR B 410 85.18 -158.33 REMARK 500 ASN B 416 83.67 -154.01 REMARK 500 HIS B 429 -63.90 -126.23 REMARK 500 ILE B 438 -61.41 -130.54 REMARK 500 GLU B 457 -73.17 -116.17 REMARK 500 HIS B 479 135.77 -170.45 REMARK 500 TRP B 511 -7.74 85.83 REMARK 500 SER B 589 -54.61 -122.75 REMARK 500 PHE G 342 -84.33 -124.91 REMARK 500 TYR H 410 87.74 -157.63 REMARK 500 ASN H 416 81.17 -158.93 REMARK 500 HIS H 429 -59.93 -127.05 REMARK 500 ILE H 438 -67.83 -124.66 REMARK 500 ASN H 458 23.70 -142.53 REMARK 500 TRP H 511 -18.37 91.56 REMARK 500 ASN H 579 11.98 -147.10 REMARK 500 ASN H 579 10.23 -147.10 REMARK 500 ASN H 580 0.90 80.80 REMARK 500 SER H 589 -53.87 -122.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO C 671 GLU C 672 65.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 809 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 348 OE1 REMARK 620 2 HOH A 993 O 141.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 802 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 596 O REMARK 620 2 LYS B 599 O 87.3 REMARK 620 3 HOH B 905 O 95.5 73.4 REMARK 620 4 HOH B 952 O 88.5 86.4 159.1 REMARK 620 5 HOH B1011 O 109.7 163.0 102.8 95.0 REMARK 620 6 HOH B1012 O 152.2 65.5 82.6 84.4 97.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA G 804 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR G 359 O REMARK 620 2 HOH G1117 O 90.8 REMARK 620 3 TYR H 497 OH 75.3 88.5 REMARK 620 4 HOH H 944 O 152.6 84.5 77.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA H 808 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR H 410 OH REMARK 620 2 TRP H 455 O 112.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA H 803 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER H 442 OG REMARK 620 2 LYS H 470 O 134.8 REMARK 620 3 HOH H1029 O 94.4 101.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA H 806 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO H 555 O REMARK 620 2 HOH H 936 O 81.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA H 801 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG H 596 O REMARK 620 2 LYS H 599 O 92.1 REMARK 620 3 HOH H 934 O 88.4 92.0 REMARK 620 4 HOH H1002 O 100.0 82.7 170.1 REMARK 620 5 HOH H1003 O 105.0 162.9 88.2 94.5 REMARK 620 6 HOH H1025 O 162.8 73.0 83.8 86.7 90.0 REMARK 620 N 1 2 3 4 5 REMARK 630 REMARK 630 MOLECULE TYPE: PEPTIDE-LIKE INHIBITOR REMARK 630 MOLECULE NAME: D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO)METHYL] REMARK 630 AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L-PROLINAMIDE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 0G6 B 707 REMARK 630 0G6 H 707 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: DPN PRO AR7 0QE REMARK 630 DETAILS: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PPB RELATED DB: PDB REMARK 900 FPR-THROMBIN STRUCTURE REMARK 900 RELATED ID: 1NU7 RELATED DB: PDB REMARK 900 THROMBIN-STAPHYLOCOAGULASE COMPLEX REMARK 900 RELATED ID: 1E0F RELATED DB: PDB REMARK 900 THROMBIN COMPLEX WITH HAEMADIN, AN EXOSITE II-BINDING INHIBITOR REMARK 900 RELATED ID: 1DX5 RELATED DB: PDB REMARK 900 THROMBIN-THROMBOMODULIN COMPLEX REMARK 900 RELATED ID: 3LU9 RELATED DB: PDB REMARK 900 SER195ALA THROMBIN MUTANT BOUND TO PAR1 FRAGMENT REMARK 900 RELATED ID: 2PW8 RELATED DB: PDB REMARK 900 THROMBIN COMPLEX WITH SULFOHIRUDIN REMARK 900 RELATED ID: 3P70 RELATED DB: PDB DBREF 3P6Z A 328 363 UNP P00734 THRB_HUMAN 328 363 DBREF 3P6Z B 364 622 UNP P00734 THRB_HUMAN 364 622 DBREF 3P6Z C 657 709 UNP P12259 FA5_HUMAN 685 737 DBREF 3P6Z G 328 363 UNP P00734 THRB_HUMAN 328 363 DBREF 3P6Z H 364 622 UNP P00734 THRB_HUMAN 364 622 DBREF 3P6Z I 657 709 UNP P12259 FA5_HUMAN 685 737 SEQADV 3P6Z ALA C 639 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS C 640 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS C 641 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS C 642 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS C 643 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS C 644 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS C 645 UNP P12259 EXPRESSION TAG SEQADV 3P6Z VAL C 646 UNP P12259 EXPRESSION TAG SEQADV 3P6Z GLY C 647 UNP P12259 EXPRESSION TAG SEQADV 3P6Z THR C 648 UNP P12259 EXPRESSION TAG SEQADV 3P6Z TRP C 649 UNP P12259 EXPRESSION TAG SEQADV 3P6Z GLU C 650 UNP P12259 EXPRESSION TAG SEQADV 3P6Z ASN C 651 UNP P12259 EXPRESSION TAG SEQADV 3P6Z LEU C 652 UNP P12259 EXPRESSION TAG SEQADV 3P6Z TYR C 653 UNP P12259 EXPRESSION TAG SEQADV 3P6Z PHE C 654 UNP P12259 EXPRESSION TAG SEQADV 3P6Z GLN C 655 UNP P12259 EXPRESSION TAG SEQADV 3P6Z SER C 656 UNP P12259 EXPRESSION TAG SEQADV 3P6Z ALA I 639 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS I 640 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS I 641 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS I 642 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS I 643 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS I 644 UNP P12259 EXPRESSION TAG SEQADV 3P6Z HIS I 645 UNP P12259 EXPRESSION TAG SEQADV 3P6Z VAL I 646 UNP P12259 EXPRESSION TAG SEQADV 3P6Z GLY I 647 UNP P12259 EXPRESSION TAG SEQADV 3P6Z THR I 648 UNP P12259 EXPRESSION TAG SEQADV 3P6Z TRP I 649 UNP P12259 EXPRESSION TAG SEQADV 3P6Z GLU I 650 UNP P12259 EXPRESSION TAG SEQADV 3P6Z ASN I 651 UNP P12259 EXPRESSION TAG SEQADV 3P6Z LEU I 652 UNP P12259 EXPRESSION TAG SEQADV 3P6Z TYR I 653 UNP P12259 EXPRESSION TAG SEQADV 3P6Z PHE I 654 UNP P12259 EXPRESSION TAG SEQADV 3P6Z GLN I 655 UNP P12259 EXPRESSION TAG SEQADV 3P6Z SER I 656 UNP P12259 EXPRESSION TAG SEQRES 1 A 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO SEQRES 2 A 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG SEQRES 3 A 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG SEQRES 1 B 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO SEQRES 2 B 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU SEQRES 3 B 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU SEQRES 4 B 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS SEQRES 5 B 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS SEQRES 6 B 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE SEQRES 7 B 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN SEQRES 8 B 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS SEQRES 9 B 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO SEQRES 10 B 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU SEQRES 11 B 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN SEQRES 12 B 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN SEQRES 13 B 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU SEQRES 14 B 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR SEQRES 15 B 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY SEQRES 16 B 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO SEQRES 17 B 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN SEQRES 18 B 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP SEQRES 19 B 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS SEQRES 20 B 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU SEQRES 1 C 71 ALA HIS HIS HIS HIS HIS HIS VAL GLY THR TRP GLU ASN SEQRES 2 C 71 LEU TYR PHE GLN SER ILE PRO ASP ASP ASP GLU ASP SER SEQRES 3 C 71 TYR GLU ILE PHE GLU PRO PRO GLU SER THR VAL MET ALA SEQRES 4 C 71 THR ARG LYS MET HIS ASP ARG LEU GLU PRO GLU ASP GLU SEQRES 5 C 71 GLU SER ASP ALA ASP TYR ASP TYR GLN ASN ARG LEU ALA SEQRES 6 C 71 ALA ALA LEU GLY ILE ARG SEQRES 1 G 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO SEQRES 2 G 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG SEQRES 3 G 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG SEQRES 1 H 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO SEQRES 2 H 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU SEQRES 3 H 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU SEQRES 4 H 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS SEQRES 5 H 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS SEQRES 6 H 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE SEQRES 7 H 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN SEQRES 8 H 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS SEQRES 9 H 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO SEQRES 10 H 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU SEQRES 11 H 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN SEQRES 12 H 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN SEQRES 13 H 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU SEQRES 14 H 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR SEQRES 15 H 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY SEQRES 16 H 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO SEQRES 17 H 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN SEQRES 18 H 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP SEQRES 19 H 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS SEQRES 20 H 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU SEQRES 1 I 71 ALA HIS HIS HIS HIS HIS HIS VAL GLY THR TRP GLU ASN SEQRES 2 I 71 LEU TYR PHE GLN SER ILE PRO ASP ASP ASP GLU ASP SER SEQRES 3 I 71 TYR GLU ILE PHE GLU PRO PRO GLU SER THR VAL MET ALA SEQRES 4 I 71 THR ARG LYS MET HIS ASP ARG LEU GLU PRO GLU ASP GLU SEQRES 5 I 71 GLU SER ASP ALA ASP TYR ASP TYR GLN ASN ARG LEU ALA SEQRES 6 I 71 ALA ALA LEU GLY ILE ARG MODRES 3P6Z ASN H 416 ASN GLYCOSYLATION SITE MODRES 3P6Z ASN B 416 ASN GLYCOSYLATION SITE HET NA A 809 1 HET 0G6 B 707 30 HET NAG B1416 14 HET NA B 802 1 HET NA B 805 1 HET CL B 850 1 HET CL B 851 1 HET CL B 852 1 HET MPD B 901 8 HET NA G 804 1 HET 0G6 H 707 30 HET NAG H1416 14 HET NA H 801 1 HET NA H 803 1 HET NA H 806 1 HET NA H 807 1 HET NA H 808 1 HETNAM NA SODIUM ION HETNAM 0G6 D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO) HETNAM 2 0G6 METHYL]AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L- HETNAM 3 0G6 PROLINAMIDE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN 0G6 PPACK HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 7 NA 9(NA 1+) FORMUL 8 0G6 2(C21 H34 CL N6 O3 1+) FORMUL 9 NAG 2(C8 H15 N O6) FORMUL 12 CL 3(CL 1-) FORMUL 15 MPD C6 H14 O2 FORMUL 24 HOH *505(H2 O) HELIX 1 1 PHE A 342 SER A 346 5 5 HELIX 2 2 THR A 351 ASP A 361 1 11 HELIX 3 3 ALA B 404 CYS B 407 5 4 HELIX 4 4 PRO B 411 ASP B 414 5 4 HELIX 5 5 THR B 418 ASN B 420 5 3 HELIX 6 6 ASP B 485 LEU B 493 1 9 HELIX 7 7 GLU B 532 SER B 539 1 8 HELIX 8 8 LYS B 554 GLY B 558 5 5 HELIX 9 9 LEU B 609 GLY B 621 1 13 HELIX 10 10 PHE G 342 SER G 346 5 5 HELIX 11 11 THR G 351 ASP G 361 1 11 HELIX 12 12 ALA H 404 CYS H 407 5 4 HELIX 13 13 PRO H 411 ASP H 414 5 4 HELIX 14 14 THR H 418 ASN H 420 5 3 HELIX 15 15 ASP H 485 LEU H 493 1 9 HELIX 16 16 GLU H 532 SER H 539 1 8 HELIX 17 17 LYS H 554 GLY H 558 5 5 HELIX 18 18 LEU H 609 GLY H 621 1 13 SHEET 1 A 7 SER B 368 ASP B 369 0 SHEET 2 A 7 GLN B 524 PRO B 529 -1 O VAL B 525 N SER B 368 SHEET 3 A 7 LYS B 498 GLY B 503 -1 N GLY B 499 O LEU B 528 SHEET 4 A 7 PRO B 571 LYS B 575 -1 O VAL B 573 N ARG B 500 SHEET 5 A 7 TRP B 582 TRP B 590 -1 O TYR B 583 N MET B 574 SHEET 6 A 7 GLY B 601 HIS B 605 -1 O PHE B 602 N TRP B 590 SHEET 7 A 7 MET B 548 ALA B 551 -1 N PHE B 549 O TYR B 603 SHEET 1 B 7 GLN B 378 ARG B 383 0 SHEET 2 B 7 GLU B 388 LEU B 395 -1 O LEU B 390 N LEU B 381 SHEET 3 B 7 TRP B 400 THR B 403 -1 O LEU B 402 N SER B 394 SHEET 4 B 7 ALA B 464 LEU B 468 -1 O ALA B 464 N THR B 403 SHEET 5 B 7 LYS B 440 ILE B 449 -1 N TYR B 448 O LEU B 465 SHEET 6 B 7 LEU B 422 ILE B 426 -1 N ILE B 426 O LYS B 440 SHEET 7 B 7 GLN B 378 ARG B 383 -1 N PHE B 382 O LEU B 423 SHEET 1 C 2 LEU B 409 TYR B 410 0 SHEET 2 C 2 LYS B 415 ASN B 416 -1 O LYS B 415 N TYR B 410 SHEET 1 D 7 SER H 368 ASP H 369 0 SHEET 2 D 7 GLN H 524 PRO H 529 -1 O VAL H 525 N SER H 368 SHEET 3 D 7 LYS H 498 GLY H 503 -1 N VAL H 501 O VAL H 526 SHEET 4 D 7 PRO H 571 LYS H 575 -1 O VAL H 573 N ARG H 500 SHEET 5 D 7 TRP H 582 TRP H 590 -1 O TYR H 583 N MET H 574 SHEET 6 D 7 GLY H 601 HIS H 605 -1 O PHE H 602 N TRP H 590 SHEET 7 D 7 MET H 548 ALA H 551 -1 N PHE H 549 O TYR H 603 SHEET 1 E 7 GLN H 378 ARG H 383 0 SHEET 2 E 7 GLU H 388 LEU H 395 -1 O GLU H 388 N ARG H 383 SHEET 3 E 7 TRP H 400 THR H 403 -1 O LEU H 402 N SER H 394 SHEET 4 E 7 ALA H 464 LEU H 468 -1 O ALA H 464 N THR H 403 SHEET 5 E 7 LYS H 440 ILE H 449 -1 N GLU H 445 O LYS H 467 SHEET 6 E 7 LEU H 422 ILE H 426 -1 N ILE H 426 O LYS H 440 SHEET 7 E 7 GLN H 378 ARG H 383 -1 N PHE H 382 O LEU H 423 SHEET 1 F 2 LEU H 409 TYR H 410 0 SHEET 2 F 2 LYS H 415 ASN H 416 -1 O LYS H 415 N TYR H 410 SSBOND 1 CYS A 336 CYS B 482 1555 1555 2.03 SSBOND 2 CYS B 391 CYS B 407 1555 1555 2.03 SSBOND 3 CYS B 536 CYS B 550 1555 1555 2.05 SSBOND 4 CYS B 564 CYS B 594 1555 1555 2.05 SSBOND 5 CYS G 336 CYS H 482 1555 1555 2.10 SSBOND 6 CYS H 391 CYS H 407 1555 1555 2.08 SSBOND 7 CYS H 536 CYS H 550 1555 1555 2.00 SSBOND 8 CYS H 564 CYS H 594 1555 1555 2.02 LINK NE2 HIS B 406 C3 0G6 B 707 1555 1555 1.58 LINK ND2 ASN B 416 C1 NAG B1416 1555 1555 1.45 LINK OG SER B 568 C2 0G6 B 707 1555 1555 1.80 LINK NE2 HIS H 406 C3 0G6 H 707 1555 1555 1.73 LINK ND2 ASN H 416 C1 NAG H1416 1555 1555 1.44 LINK OG SER H 568 C2 0G6 H 707 1555 1555 1.81 LINK OE1 GLU A 348 NA NA A 809 1555 1555 2.52 LINK NA NA A 809 O HOH A 993 1555 1555 2.76 LINK O PHE B 417 NA NA B 805 1555 1555 2.41 LINK O ARG B 596 NA NA B 802 1555 1555 2.47 LINK O LYS B 599 NA NA B 802 1555 1555 2.49 LINK NA NA B 802 O HOH B 905 1555 1555 2.53 LINK NA NA B 802 O HOH B 952 1555 1555 2.76 LINK NA NA B 802 O HOH B1011 1555 1555 2.14 LINK NA NA B 802 O HOH B1012 1555 1555 2.40 LINK O TYR G 359 NA NA G 804 1555 1555 2.37 LINK NA NA G 804 O HOH G1117 1555 1555 2.29 LINK NA NA G 804 OH TYR H 497 1555 1555 2.80 LINK NA NA G 804 O HOH H 944 1555 1555 2.31 LINK OH TYR H 410 NA NA H 808 1555 1555 2.76 LINK OG SER H 442 NA NA H 803 1555 1555 2.98 LINK O TRP H 455 NA NA H 808 1555 1555 2.41 LINK O LYS H 470 NA NA H 803 1555 1555 2.49 LINK OD1 ASP H 476 NA NA H 807 1555 1555 2.32 LINK O PRO H 555 NA NA H 806 1555 1555 2.41 LINK O ARG H 596 NA NA H 801 1555 1555 2.36 LINK O LYS H 599 NA NA H 801 1555 1555 2.42 LINK NA NA H 801 O HOH H 934 1555 1555 2.73 LINK NA NA H 801 O HOH H1002 1555 1555 2.35 LINK NA NA H 801 O HOH H1003 1555 1555 2.60 LINK NA NA H 801 O HOH H1025 1555 1555 2.44 LINK NA NA H 803 O HOH H1029 1555 1555 3.14 LINK NA NA H 806 O HOH H 936 1555 1555 3.15 CISPEP 1 SER B 385 PRO B 386 0 -4.64 CISPEP 2 SER H 385 PRO H 386 0 -6.22 CRYST1 52.208 62.259 67.510 99.38 110.46 92.26 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019154 0.000756 0.007422 0.00000 SCALE2 0.000000 0.016074 0.003091 0.00000 SCALE3 0.000000 0.000000 0.016100 0.00000