PDB Short entry for 3PDY HEADER STRUCTURAL PROTEIN 25-OCT-10 3PDY TITLE STRUCTURE OF THE THIRD AND FOURTH SPECTRIN REPEATS OF THE PLAKIN TITLE 2 DOMAIN OF PLECTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLECTIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SPECTRIN REPEATS 3 AND 4 (UNP RESIDUES 653-848); COMPND 5 SYNONYM: PCN, PLTN, HEMIDESMOSOMAL PROTEIN 1, HD1, PLECTIN-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLEC, PLEC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET15B KEYWDS CYTOSKELETON, PLAKIN, INTERMEDIATE FILAMENT, SPECTRIN REPEAT, KEYWDS 2 STRUCTURAL PROTEIN, CROSSLINKING EXPDTA X-RAY DIFFRACTION AUTHOR E.ORTEGA,J.M.DE PEREDA REVDAT 3 06-SEP-23 3PDY 1 REMARK SEQADV REVDAT 2 20-APR-11 3PDY 1 JRNL REVDAT 1 02-FEB-11 3PDY 0 JRNL AUTH E.ORTEGA,R.M.BUEY,A.SONNENBERG,J.M.DE PEREDA JRNL TITL THE STRUCTURE OF THE PLAKIN DOMAIN OF PLECTIN REVEALS A JRNL TITL 2 NON-CANONICAL SH3 DOMAIN INTERACTING WITH ITS FOURTH JRNL TITL 3 SPECTRIN REPEAT. JRNL REF J.BIOL.CHEM. V. 286 12429 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21288893 JRNL DOI 10.1074/JBC.M110.197467 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_357) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.800 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 26072 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1315 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9836 - 4.5973 0.99 2954 153 0.1698 0.1947 REMARK 3 2 4.5973 - 3.6563 0.99 2835 138 0.1616 0.2042 REMARK 3 3 3.6563 - 3.1963 1.00 2770 166 0.1884 0.2259 REMARK 3 4 3.1963 - 2.9050 0.99 2743 159 0.2319 0.2746 REMARK 3 5 2.9050 - 2.6973 0.99 2744 176 0.2370 0.2909 REMARK 3 6 2.6973 - 2.5386 0.99 2733 142 0.2255 0.2926 REMARK 3 7 2.5386 - 2.4117 0.99 2765 113 0.2190 0.2757 REMARK 3 8 2.4117 - 2.3069 0.99 2724 149 0.2166 0.2955 REMARK 3 9 2.3069 - 2.2182 0.91 2489 119 0.2234 0.2798 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 42.75 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.11360 REMARK 3 B22 (A**2) : -3.46190 REMARK 3 B33 (A**2) : 4.57550 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3358 REMARK 3 ANGLE : 0.679 4519 REMARK 3 CHIRALITY : 0.048 482 REMARK 3 PLANARITY : 0.002 590 REMARK 3 DIHEDRAL : 13.089 1275 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 545:599) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8592 -7.2825 7.2128 REMARK 3 T TENSOR REMARK 3 T11: 0.2556 T22: 0.2473 REMARK 3 T33: 0.3814 T12: -0.0053 REMARK 3 T13: -0.0039 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.1540 L22: 0.5340 REMARK 3 L33: 0.0289 L12: 0.3651 REMARK 3 L13: -0.0100 L23: -0.1320 REMARK 3 S TENSOR REMARK 3 S11: 0.1379 S12: -0.0722 S13: -0.3537 REMARK 3 S21: 0.4326 S22: -0.0451 S23: -0.0373 REMARK 3 S31: 0.2239 S32: 0.0602 S33: 0.0011 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 600:653) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1326 -9.4927 -0.2893 REMARK 3 T TENSOR REMARK 3 T11: 0.1250 T22: 0.1482 REMARK 3 T33: 0.2805 T12: 0.0047 REMARK 3 T13: -0.0748 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.3535 L22: 0.4760 REMARK 3 L33: 0.2228 L12: 0.1187 REMARK 3 L13: 0.1841 L23: -0.0899 REMARK 3 S TENSOR REMARK 3 S11: -0.1604 S12: 0.2814 S13: 0.0431 REMARK 3 S21: -0.3410 S22: 0.3174 S23: 0.3139 REMARK 3 S31: 0.0585 S32: 0.0375 S33: 0.0224 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 654:746) REMARK 3 ORIGIN FOR THE GROUP (A): 52.9482 29.7807 2.9237 REMARK 3 T TENSOR REMARK 3 T11: 0.1878 T22: 0.2410 REMARK 3 T33: 0.1868 T12: -0.0352 REMARK 3 T13: -0.0390 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 0.4686 L22: 0.7376 REMARK 3 L33: 0.1521 L12: 0.1722 REMARK 3 L13: 0.2308 L23: -0.0761 REMARK 3 S TENSOR REMARK 3 S11: -0.1335 S12: 0.3284 S13: 0.0967 REMARK 3 S21: 0.0858 S22: 0.1235 S23: 0.0206 REMARK 3 S31: -0.0827 S32: 0.0247 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 541:559) REMARK 3 ORIGIN FOR THE GROUP (A): 39.2782 23.0715 28.5091 REMARK 3 T TENSOR REMARK 3 T11: 0.3697 T22: 0.2439 REMARK 3 T33: 0.1646 T12: 0.0074 REMARK 3 T13: 0.0073 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 0.0209 L22: 1.0309 REMARK 3 L33: 0.1110 L12: 0.0687 REMARK 3 L13: -0.0442 L23: -0.1714 REMARK 3 S TENSOR REMARK 3 S11: 0.0975 S12: -0.3936 S13: 0.1194 REMARK 3 S21: 0.2462 S22: -0.0562 S23: 0.7098 REMARK 3 S31: -0.0234 S32: -0.0639 S33: 0.0088 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 560:653) REMARK 3 ORIGIN FOR THE GROUP (A): 29.6140 7.4204 24.8402 REMARK 3 T TENSOR REMARK 3 T11: 0.3063 T22: 0.2599 REMARK 3 T33: 0.2590 T12: -0.0290 REMARK 3 T13: 0.0305 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.4456 L22: 0.4633 REMARK 3 L33: -0.1700 L12: 0.8897 REMARK 3 L13: 0.1816 L23: -0.1971 REMARK 3 S TENSOR REMARK 3 S11: -0.1479 S12: -0.0386 S13: -0.0363 REMARK 3 S21: -0.1220 S22: 0.0718 S23: -0.0410 REMARK 3 S31: 0.0249 S32: 0.0572 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 654:745) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6157 -20.9221 24.1017 REMARK 3 T TENSOR REMARK 3 T11: 0.3229 T22: 0.2257 REMARK 3 T33: 0.2080 T12: 0.0237 REMARK 3 T13: -0.0973 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 0.3680 L22: 1.2306 REMARK 3 L33: 0.2665 L12: -0.1903 REMARK 3 L13: -0.2485 L23: 0.3450 REMARK 3 S TENSOR REMARK 3 S11: 0.0191 S12: 0.0279 S13: 0.2723 REMARK 3 S21: -0.3879 S22: -0.0499 S23: 0.1591 REMARK 3 S31: -0.1889 S32: -0.0656 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PDY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000062261. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR-H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : HELIOS OPTICS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26072 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.218 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: HOMOLOGY MODEL BASED ON PDB ENTRY 2IAK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 17% PEG 4000, 8% REMARK 280 ISOPROPANOL, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 48.71000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.70000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.71000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.70000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 48.71000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 59.70000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 44.58000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 539 REMARK 465 SER A 540 REMARK 465 HIS A 541 REMARK 465 MET A 542 REMARK 465 GLU A 543 REMARK 465 LEU A 544 REMARK 465 GLU A 747 REMARK 465 ASN A 748 REMARK 465 GLY B 539 REMARK 465 SER B 540 REMARK 465 LYS B 746 REMARK 465 GLU B 747 REMARK 465 ASN B 748 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 545 CG CD OE1 OE2 REMARK 470 LYS A 746 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 716 33.63 -98.77 REMARK 500 ALA B 716 41.24 -102.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ODU RELATED DB: PDB REMARK 900 ANOTHER PAIR OF SPECTRIN REPEATS OF THE SAME PROTEIN REMARK 900 RELATED ID: 2ODV RELATED DB: PDB REMARK 900 ANOTHER PAIR OF SPECTRIN REPEATS OF THE SAME PROTEIN REMARK 900 RELATED ID: 2IAK RELATED DB: PDB REMARK 900 EQUIVALENT REGION OF THE PROTEIN BPAG1 REMARK 900 RELATED ID: 3PE0 RELATED DB: PDB REMARK 900 ANOTHER FRAGMENT OF THE PLAKIN DOMAIN WHICH SHARES THE SPECTRIN REMARK 900 REPEAT 4 WITH THIS STRUCTURE DBREF 3PDY A 543 748 UNP Q15149 PLEC_HUMAN 653 858 DBREF 3PDY B 543 748 UNP Q15149 PLEC_HUMAN 653 858 SEQADV 3PDY GLY A 539 UNP Q15149 EXPRESSION TAG SEQADV 3PDY SER A 540 UNP Q15149 EXPRESSION TAG SEQADV 3PDY HIS A 541 UNP Q15149 EXPRESSION TAG SEQADV 3PDY MET A 542 UNP Q15149 EXPRESSION TAG SEQADV 3PDY GLY B 539 UNP Q15149 EXPRESSION TAG SEQADV 3PDY SER B 540 UNP Q15149 EXPRESSION TAG SEQADV 3PDY HIS B 541 UNP Q15149 EXPRESSION TAG SEQADV 3PDY MET B 542 UNP Q15149 EXPRESSION TAG SEQRES 1 A 210 GLY SER HIS MET GLU LEU GLU ASP SER THR LEU ARG TYR SEQRES 2 A 210 LEU GLN ASP LEU LEU ALA TRP VAL GLU GLU ASN GLN HIS SEQRES 3 A 210 ARG VAL ASP GLY ALA GLU TRP GLY VAL ASP LEU PRO SER SEQRES 4 A 210 VAL GLU ALA GLN LEU GLY SER HIS ARG GLY LEU HIS GLN SEQRES 5 A 210 SER ILE GLU GLU PHE ARG ALA LYS ILE GLU ARG ALA ARG SEQRES 6 A 210 SER ASP GLU GLY GLN LEU SER PRO ALA THR ARG GLY ALA SEQRES 7 A 210 TYR ARG ASP CYS LEU GLY ARG LEU ASP LEU GLN TYR ALA SEQRES 8 A 210 LYS LEU LEU ASN SER SER LYS ALA ARG LEU ARG SER LEU SEQRES 9 A 210 GLU SER LEU HIS SER PHE VAL ALA ALA ALA THR LYS GLU SEQRES 10 A 210 LEU MET TRP LEU ASN GLU LYS GLU GLU GLU GLU VAL GLY SEQRES 11 A 210 PHE ASP TRP SER ASP ARG ASN THR ASN MET THR ALA LYS SEQRES 12 A 210 LYS GLU SER TYR SER ALA LEU MET ARG GLU LEU GLU LEU SEQRES 13 A 210 LYS GLU LYS LYS ILE LYS GLU LEU GLN ASN ALA GLY ASP SEQRES 14 A 210 ARG LEU LEU ARG GLU ASP HIS PRO ALA ARG PRO THR VAL SEQRES 15 A 210 GLU SER PHE GLN ALA ALA LEU GLN THR GLN TRP SER TRP SEQRES 16 A 210 MET LEU GLN LEU CYS CYS CYS ILE GLU ALA HIS LEU LYS SEQRES 17 A 210 GLU ASN SEQRES 1 B 210 GLY SER HIS MET GLU LEU GLU ASP SER THR LEU ARG TYR SEQRES 2 B 210 LEU GLN ASP LEU LEU ALA TRP VAL GLU GLU ASN GLN HIS SEQRES 3 B 210 ARG VAL ASP GLY ALA GLU TRP GLY VAL ASP LEU PRO SER SEQRES 4 B 210 VAL GLU ALA GLN LEU GLY SER HIS ARG GLY LEU HIS GLN SEQRES 5 B 210 SER ILE GLU GLU PHE ARG ALA LYS ILE GLU ARG ALA ARG SEQRES 6 B 210 SER ASP GLU GLY GLN LEU SER PRO ALA THR ARG GLY ALA SEQRES 7 B 210 TYR ARG ASP CYS LEU GLY ARG LEU ASP LEU GLN TYR ALA SEQRES 8 B 210 LYS LEU LEU ASN SER SER LYS ALA ARG LEU ARG SER LEU SEQRES 9 B 210 GLU SER LEU HIS SER PHE VAL ALA ALA ALA THR LYS GLU SEQRES 10 B 210 LEU MET TRP LEU ASN GLU LYS GLU GLU GLU GLU VAL GLY SEQRES 11 B 210 PHE ASP TRP SER ASP ARG ASN THR ASN MET THR ALA LYS SEQRES 12 B 210 LYS GLU SER TYR SER ALA LEU MET ARG GLU LEU GLU LEU SEQRES 13 B 210 LYS GLU LYS LYS ILE LYS GLU LEU GLN ASN ALA GLY ASP SEQRES 14 B 210 ARG LEU LEU ARG GLU ASP HIS PRO ALA ARG PRO THR VAL SEQRES 15 B 210 GLU SER PHE GLN ALA ALA LEU GLN THR GLN TRP SER TRP SEQRES 16 B 210 MET LEU GLN LEU CYS CYS CYS ILE GLU ALA HIS LEU LYS SEQRES 17 B 210 GLU ASN HET EDO A 201 4 HET PEG A 202 7 HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO C2 H6 O2 FORMUL 4 PEG C4 H10 O3 FORMUL 5 HOH *210(H2 O) HELIX 1 1 GLU A 545 ALA A 569 1 25 HELIX 2 2 ASP A 574 ASP A 605 1 32 HELIX 3 3 GLU A 606 LEU A 609 5 4 HELIX 4 4 SER A 610 PHE A 669 1 60 HELIX 5 5 ASN A 677 GLU A 712 1 36 HELIX 6 6 ALA A 716 LEU A 745 1 30 HELIX 7 7 LEU B 544 GLY B 568 1 25 HELIX 8 8 ASP B 574 ASP B 605 1 32 HELIX 9 9 GLU B 606 LEU B 609 5 4 HELIX 10 10 SER B 610 PHE B 669 1 60 HELIX 11 11 ASN B 677 GLU B 712 1 36 HELIX 12 12 ALA B 716 ALA B 743 1 28 SITE 1 AC1 4 ILE A 699 GLN A 703 GLN A 728 TRP A 731 SITE 1 AC2 6 TRP A 571 SER A 634 ALA A 637 ARG A 638 SITE 2 AC2 6 SER A 641 PRO A 715 CRYST1 97.420 119.400 44.580 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010265 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008375 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022432 0.00000