PDB Short entry for 3PIM HEADER OXIDOREDUCTASE 07-NOV-10 3PIM TITLE CRYSTAL STRUCTURE OF MXR1 FROM SACCHAROMYCES CEREVISIAE IN UNUSUAL TITLE 2 OXIDIZED FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDE METHIONINE SULFOXIDE REDUCTASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: MXR1, PEPTIDE-METHIONINE (S)-S-OXIDE REDUCTASE, PEPTIDE COMPND 5 MET(O) REDUCTASE, PROTEIN-METHIONINE-S-OXIDE REDUCTASE; COMPND 6 EC: 1.8.4.11; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: MXR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET29B KEYWDS METHIONINE-S-SULFOXIDE REDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR X.X.MA,P.C.GUO,W.W.SHI,M.LUO,X.F.TAN,Y.CHEN,C.Z.ZHOU REVDAT 3 01-NOV-23 3PIM 1 SEQADV REVDAT 2 09-APR-14 3PIM 1 JRNL VERSN REVDAT 1 23-FEB-11 3PIM 0 JRNL AUTH X.X.MA,P.C.GUO,W.W.SHI,M.LUO,X.F.TAN,Y.CHEN,C.Z.ZHOU JRNL TITL STRUCTURAL PLASTICITY OF THE THIOREDOXIN RECOGNITION SITE OF JRNL TITL 2 YEAST METHIONINE S-SULFOXIDE REDUCTASE MXR1 JRNL REF J.BIOL.CHEM. V. 286 13430 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21345799 JRNL DOI 10.1074/JBC.M110.205161 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 55925 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2999 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4095 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE SET COUNT : 239 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4187 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 234 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.06000 REMARK 3 B12 (A**2) : -0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.146 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.247 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4298 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5809 ; 1.200 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 504 ; 5.656 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 214 ;33.459 ;24.112 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 737 ;13.107 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;19.994 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 604 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3291 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2549 ; 0.746 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4107 ; 1.388 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1749 ; 1.966 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1702 ; 3.345 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 184 REMARK 3 ORIGIN FOR THE GROUP (A): 45.0398 36.2660 15.0957 REMARK 3 T TENSOR REMARK 3 T11: 0.0701 T22: 0.0314 REMARK 3 T33: 0.0402 T12: 0.0372 REMARK 3 T13: -0.0119 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.2329 L22: 0.4841 REMARK 3 L33: 0.4880 L12: -0.1069 REMARK 3 L13: 0.0166 L23: 0.1752 REMARK 3 S TENSOR REMARK 3 S11: -0.0157 S12: 0.0198 S13: 0.0571 REMARK 3 S21: 0.0165 S22: -0.0174 S23: -0.0141 REMARK 3 S31: -0.0275 S32: -0.0382 S33: 0.0330 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -2 B 184 REMARK 3 ORIGIN FOR THE GROUP (A): 53.4273 12.6985 9.4803 REMARK 3 T TENSOR REMARK 3 T11: 0.0756 T22: 0.0309 REMARK 3 T33: 0.0386 T12: 0.0236 REMARK 3 T13: -0.0048 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.1790 L22: 0.4393 REMARK 3 L33: 0.3679 L12: 0.0550 REMARK 3 L13: 0.0559 L23: -0.0346 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: 0.0082 S13: -0.0165 REMARK 3 S21: -0.0041 S22: 0.0384 S23: -0.0268 REMARK 3 S31: 0.0374 S32: 0.0196 S33: -0.0251 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 184 REMARK 3 ORIGIN FOR THE GROUP (A): 19.4993 -6.8087 3.3372 REMARK 3 T TENSOR REMARK 3 T11: 0.2611 T22: 0.3100 REMARK 3 T33: 0.3467 T12: -0.1572 REMARK 3 T13: 0.1222 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 4.2178 L22: 3.3501 REMARK 3 L33: 3.8907 L12: 0.0815 REMARK 3 L13: 3.4535 L23: 1.7381 REMARK 3 S TENSOR REMARK 3 S11: 0.0523 S12: -0.8600 S13: -0.6541 REMARK 3 S21: -0.7093 S22: 0.2131 S23: -0.0352 REMARK 3 S31: -0.2479 S32: -0.7086 S33: -0.2654 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 185 A 286 REMARK 3 RESIDUE RANGE : B 185 B 303 REMARK 3 RESIDUE RANGE : C 185 C 234 REMARK 3 ORIGIN FOR THE GROUP (A): 46.5061 22.7528 13.0633 REMARK 3 T TENSOR REMARK 3 T11: 0.0763 T22: 0.0326 REMARK 3 T33: 0.0183 T12: 0.0275 REMARK 3 T13: -0.0121 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.1726 L22: 0.2295 REMARK 3 L33: 0.2025 L12: -0.0009 REMARK 3 L13: -0.0252 L23: 0.0571 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: 0.0009 S13: 0.0152 REMARK 3 S21: 0.0109 S22: -0.0213 S23: -0.0204 REMARK 3 S31: 0.0171 S32: -0.0398 S33: 0.0219 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3PIM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1000062416. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59060 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3PIL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5M AMMONIUM SULFATE, 0.1M SODIUM REMARK 280 CITRATE, 1.0M LITHIUM SULFATE, PH 5.6, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.04133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.08267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 72.08267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.04133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHOR DETERMINED BIOLOGICAL ASSEMBLY: UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 54 REMARK 465 LYS A 55 REMARK 465 LYS A 56 REMARK 465 ASP A 57 REMARK 465 SER A 58 REMARK 465 PRO A 59 REMARK 465 SER A 60 REMARK 465 SER A 61 REMARK 465 VAL A 62 REMARK 465 GLN A 108 REMARK 465 GLY A 109 REMARK 465 PRO A 110 REMARK 465 ASP A 111 REMARK 465 LYS A 112 REMARK 465 LYS B 55 REMARK 465 LYS B 56 REMARK 465 ASP B 57 REMARK 465 SER B 58 REMARK 465 PRO B 59 REMARK 465 SER B 60 REMARK 465 SER B 61 REMARK 465 VAL B 62 REMARK 465 SER B 63 REMARK 465 ASP B 111 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 HIS C 0 REMARK 465 GLY C 1 REMARK 465 LYS C 55 REMARK 465 LYS C 56 REMARK 465 ASP C 57 REMARK 465 SER C 58 REMARK 465 PRO C 59 REMARK 465 SER C 60 REMARK 465 SER C 61 REMARK 465 VAL C 62 REMARK 465 SER C 63 REMARK 465 TYR C 64 REMARK 465 LYS C 65 REMARK 465 ARG C 66 REMARK 465 ASN C 106 REMARK 465 SER C 107 REMARK 465 GLN C 108 REMARK 465 GLY C 109 REMARK 465 PRO C 110 REMARK 465 ASP C 111 REMARK 465 LYS C 112 REMARK 465 GLY C 113 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 23 35.20 -156.01 REMARK 500 CYS B 23 40.47 -152.10 REMARK 500 ASP B 168 -129.55 57.18 REMARK 500 CYS C 23 39.23 -149.49 REMARK 500 ASP C 168 -131.79 49.91 REMARK 500 GLU C 183 98.04 -66.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PIL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MXR1 FROM SACCHAROMYCES CEREVISIAE IN REDUCED REMARK 900 FORM REMARK 900 RELATED ID: 3PIN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MXR1 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX REMARK 900 WITH TRX2 DBREF 3PIM A 2 184 UNP P40029 MSRA_YEAST 2 184 DBREF 3PIM B 2 184 UNP P40029 MSRA_YEAST 2 184 DBREF 3PIM C 2 184 UNP P40029 MSRA_YEAST 2 184 SEQADV 3PIM HIS A -2 UNP P40029 EXPRESSION TAG SEQADV 3PIM HIS A -1 UNP P40029 EXPRESSION TAG SEQADV 3PIM HIS A 0 UNP P40029 EXPRESSION TAG SEQADV 3PIM GLY A 1 UNP P40029 EXPRESSION TAG SEQADV 3PIM HIS B -2 UNP P40029 EXPRESSION TAG SEQADV 3PIM HIS B -1 UNP P40029 EXPRESSION TAG SEQADV 3PIM HIS B 0 UNP P40029 EXPRESSION TAG SEQADV 3PIM GLY B 1 UNP P40029 EXPRESSION TAG SEQADV 3PIM HIS C -2 UNP P40029 EXPRESSION TAG SEQADV 3PIM HIS C -1 UNP P40029 EXPRESSION TAG SEQADV 3PIM HIS C 0 UNP P40029 EXPRESSION TAG SEQADV 3PIM GLY C 1 UNP P40029 EXPRESSION TAG SEQRES 1 A 187 HIS HIS HIS GLY SER SER LEU ILE SER LYS THR ILE LYS SEQRES 2 A 187 TYR ASP PRO ALA LYS ASP LYS LEU ILE THR LEU ALA CYS SEQRES 3 A 187 GLY CYS PHE TRP GLY THR GLU HIS MET TYR ARG LYS TYR SEQRES 4 A 187 LEU ASN ASP ARG ILE VAL ASP CYS LYS VAL GLY TYR ALA SEQRES 5 A 187 ASN GLY GLU GLU SER LYS LYS ASP SER PRO SER SER VAL SEQRES 6 A 187 SER TYR LYS ARG VAL CYS GLY GLY ASP THR ASP PHE ALA SEQRES 7 A 187 GLU VAL LEU GLN VAL SER TYR ASN PRO LYS VAL ILE THR SEQRES 8 A 187 LEU ARG GLU LEU THR ASP PHE PHE PHE ARG ILE HIS ASP SEQRES 9 A 187 PRO THR THR SER ASN SER GLN GLY PRO ASP LYS GLY THR SEQRES 10 A 187 GLN TYR ARG SER GLY LEU PHE ALA HIS SER ASP ALA ASP SEQRES 11 A 187 LEU LYS GLU LEU ALA LYS ILE LYS GLU GLU TRP GLN PRO SEQRES 12 A 187 LYS TRP GLY ASN LYS ILE ALA THR VAL ILE GLU PRO ILE SEQRES 13 A 187 LYS ASN PHE TYR ASP ALA GLU GLU TYR HIS GLN LEU TYR SEQRES 14 A 187 LEU ASP LYS ASN PRO GLN GLY TYR ALA CYS PRO THR HIS SEQRES 15 A 187 TYR LEU ARG GLU MET SEQRES 1 B 187 HIS HIS HIS GLY SER SER LEU ILE SER LYS THR ILE LYS SEQRES 2 B 187 TYR ASP PRO ALA LYS ASP LYS LEU ILE THR LEU ALA CYS SEQRES 3 B 187 GLY CYS PHE TRP GLY THR GLU HIS MET TYR ARG LYS TYR SEQRES 4 B 187 LEU ASN ASP ARG ILE VAL ASP CYS LYS VAL GLY TYR ALA SEQRES 5 B 187 ASN GLY GLU GLU SER LYS LYS ASP SER PRO SER SER VAL SEQRES 6 B 187 SER TYR LYS ARG VAL CYS GLY GLY ASP THR ASP PHE ALA SEQRES 7 B 187 GLU VAL LEU GLN VAL SER TYR ASN PRO LYS VAL ILE THR SEQRES 8 B 187 LEU ARG GLU LEU THR ASP PHE PHE PHE ARG ILE HIS ASP SEQRES 9 B 187 PRO THR THR SER ASN SER GLN GLY PRO ASP LYS GLY THR SEQRES 10 B 187 GLN TYR ARG SER GLY LEU PHE ALA HIS SER ASP ALA ASP SEQRES 11 B 187 LEU LYS GLU LEU ALA LYS ILE LYS GLU GLU TRP GLN PRO SEQRES 12 B 187 LYS TRP GLY ASN LYS ILE ALA THR VAL ILE GLU PRO ILE SEQRES 13 B 187 LYS ASN PHE TYR ASP ALA GLU GLU TYR HIS GLN LEU TYR SEQRES 14 B 187 LEU ASP LYS ASN PRO GLN GLY TYR ALA CYS PRO THR HIS SEQRES 15 B 187 TYR LEU ARG GLU MET SEQRES 1 C 187 HIS HIS HIS GLY SER SER LEU ILE SER LYS THR ILE LYS SEQRES 2 C 187 TYR ASP PRO ALA LYS ASP LYS LEU ILE THR LEU ALA CYS SEQRES 3 C 187 GLY CYS PHE TRP GLY THR GLU HIS MET TYR ARG LYS TYR SEQRES 4 C 187 LEU ASN ASP ARG ILE VAL ASP CYS LYS VAL GLY TYR ALA SEQRES 5 C 187 ASN GLY GLU GLU SER LYS LYS ASP SER PRO SER SER VAL SEQRES 6 C 187 SER TYR LYS ARG VAL CYS GLY GLY ASP THR ASP PHE ALA SEQRES 7 C 187 GLU VAL LEU GLN VAL SER TYR ASN PRO LYS VAL ILE THR SEQRES 8 C 187 LEU ARG GLU LEU THR ASP PHE PHE PHE ARG ILE HIS ASP SEQRES 9 C 187 PRO THR THR SER ASN SER GLN GLY PRO ASP LYS GLY THR SEQRES 10 C 187 GLN TYR ARG SER GLY LEU PHE ALA HIS SER ASP ALA ASP SEQRES 11 C 187 LEU LYS GLU LEU ALA LYS ILE LYS GLU GLU TRP GLN PRO SEQRES 12 C 187 LYS TRP GLY ASN LYS ILE ALA THR VAL ILE GLU PRO ILE SEQRES 13 C 187 LYS ASN PHE TYR ASP ALA GLU GLU TYR HIS GLN LEU TYR SEQRES 14 C 187 LEU ASP LYS ASN PRO GLN GLY TYR ALA CYS PRO THR HIS SEQRES 15 C 187 TYR LEU ARG GLU MET FORMUL 4 HOH *234(H2 O) HELIX 1 1 GLY A 1 ILE A 5 5 5 HELIX 2 2 CYS A 25 ASN A 38 1 14 HELIX 3 3 ASP A 39 ILE A 41 5 3 HELIX 4 4 THR A 88 PHE A 97 1 10 HELIX 5 5 GLY A 113 ARG A 117 5 5 HELIX 6 6 SER A 124 GLN A 139 1 16 HELIX 7 7 PRO A 140 GLY A 143 5 4 HELIX 8 8 ALA A 159 LEU A 167 1 9 HELIX 9 9 GLY B 1 ILE B 5 5 5 HELIX 10 10 CYS B 25 ASN B 38 1 14 HELIX 11 11 ASP B 39 ILE B 41 5 3 HELIX 12 12 THR B 88 PHE B 97 1 10 HELIX 13 13 THR B 103 SER B 107 5 5 HELIX 14 14 GLY B 113 TYR B 116 5 4 HELIX 15 15 SER B 124 GLY B 143 1 20 HELIX 16 16 ALA B 159 TYR B 166 1 8 HELIX 17 17 CYS C 25 ASN C 38 1 14 HELIX 18 18 ASP C 39 ILE C 41 5 3 HELIX 19 19 THR C 88 PHE C 97 1 10 HELIX 20 20 SER C 124 GLY C 143 1 20 HELIX 21 21 ALA C 159 TYR C 166 1 8 SHEET 1 A 6 LYS A 17 ALA A 22 0 SHEET 2 A 6 ALA A 75 TYR A 82 -1 O VAL A 80 N ILE A 19 SHEET 3 A 6 ASP A 43 GLY A 51 -1 N LYS A 45 O GLN A 79 SHEET 4 A 6 VAL A 149 ASP A 158 -1 O LYS A 154 N ASN A 50 SHEET 5 A 6 GLY A 119 ALA A 122 1 N LEU A 120 O VAL A 149 SHEET 6 A 6 LYS A 17 ALA A 22 -1 N ALA A 22 O GLY A 119 SHEET 1 B 6 LYS B 17 CYS B 23 0 SHEET 2 B 6 ALA B 75 TYR B 82 -1 O VAL B 80 N ILE B 19 SHEET 3 B 6 ASP B 43 GLY B 51 -1 N LYS B 45 O GLN B 79 SHEET 4 B 6 VAL B 149 ASP B 158 -1 O LYS B 154 N ASN B 50 SHEET 5 B 6 SER B 118 ALA B 122 1 N LEU B 120 O VAL B 149 SHEET 6 B 6 LYS B 17 CYS B 23 -1 N THR B 20 O PHE B 121 SHEET 1 C 6 LYS C 17 CYS C 23 0 SHEET 2 C 6 ALA C 75 TYR C 82 -1 O VAL C 80 N ILE C 19 SHEET 3 C 6 ASP C 43 GLY C 51 -1 N ASP C 43 O SER C 81 SHEET 4 C 6 VAL C 149 ASP C 158 -1 O LYS C 154 N ASN C 50 SHEET 5 C 6 SER C 118 ALA C 122 1 N LEU C 120 O VAL C 149 SHEET 6 C 6 LYS C 17 CYS C 23 -1 N ALA C 22 O GLY C 119 SSBOND 1 CYS A 25 CYS B 25 1555 1555 2.08 SSBOND 2 CYS A 68 CYS A 176 1555 1555 2.11 SSBOND 3 CYS B 68 CYS B 176 1555 1555 2.13 CISPEP 1 ASN A 106 SER A 107 0 -8.82 CISPEP 2 GLU C 53 SER C 54 0 -1.85 CISPEP 3 CYS C 68 GLY C 69 0 -7.92 CRYST1 111.894 111.894 108.124 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008937 0.005160 0.000000 0.00000 SCALE2 0.000000 0.010320 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009249 0.00000