PDB Short entry for 3QGY HEADER TRANSFERASE/TRANSFERASE INHIBITOR 25-JAN-11 3QGY TITLE CRYSTAL STRUCTURE OF ITK INHIBITOR COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE ITK/TSK; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 357-620; COMPND 5 SYNONYM: KINASE EMT, T-CELL-SPECIFIC KINASE, TYROSINE-PROTEIN KINASE COMPND 6 LYK; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ITK, EMT, LYK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS PROTEIN KINASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.BROWN,G.M.T.CHEETHAM REVDAT 2 20-MAR-24 3QGY 1 REMARK SEQADV REVDAT 1 22-JUN-11 3QGY 0 JRNL AUTH J.D.CHARRIER,A.MILLER,D.P.KAY,G.BRENCHLEY,H.C.TWIN, JRNL AUTH 2 P.N.COLLIER,S.RAMAYA,S.B.KEILY,S.J.DURRANT,R.M.KNEGTEL, JRNL AUTH 3 A.J.TANNER,K.BROWN,A.P.CURNOCK,J.M.JIMENEZ JRNL TITL DISCOVERY AND STRUCTURE-ACTIVITY RELATIONSHIP OF JRNL TITL 2 3-AMINOPYRID-2-ONES AS POTENT AND SELECTIVE INTERLEUKIN-2 JRNL TITL 3 INDUCIBLE T-CELL KINASE (ITK) INHIBITORS JRNL REF J.MED.CHEM. V. 54 2341 2011 JRNL REFN ISSN 0022-2623 JRNL PMID 21391610 JRNL DOI 10.1021/JM101499U REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 31613 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 636 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3924 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 509 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QGY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000063631. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.542 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40537 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 62.93005 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.19045 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 62.93005 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.19045 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 335 REMARK 465 GLY A 336 REMARK 465 SER A 337 REMARK 465 SER A 338 REMARK 465 HIS A 339 REMARK 465 HIS A 340 REMARK 465 HIS A 341 REMARK 465 HIS A 342 REMARK 465 HIS A 343 REMARK 465 HIS A 344 REMARK 465 SER A 345 REMARK 465 SER A 346 REMARK 465 GLY A 347 REMARK 465 LEU A 348 REMARK 465 VAL A 349 REMARK 465 PRO A 350 REMARK 465 ARG A 351 REMARK 465 GLY A 352 REMARK 465 SER A 353 REMARK 465 LEU A 354 REMARK 465 MET A 503 REMARK 465 THR A 504 REMARK 465 ARG A 505 REMARK 465 PHE A 506 REMARK 465 VAL A 507 REMARK 465 LEU A 508 REMARK 465 ASP A 509 REMARK 465 ASP A 510 REMARK 465 GLN A 511 REMARK 465 TYR A 512 REMARK 465 THR A 513 REMARK 465 SER A 514 REMARK 465 SER A 515 REMARK 465 THR A 516 REMARK 465 GLY A 517 REMARK 465 THR A 518 REMARK 465 LYS A 519 REMARK 465 PHE A 520 REMARK 465 GLY A 619 REMARK 465 LEU A 620 REMARK 465 MET B 335 REMARK 465 GLY B 336 REMARK 465 SER B 337 REMARK 465 SER B 338 REMARK 465 HIS B 339 REMARK 465 HIS B 340 REMARK 465 HIS B 341 REMARK 465 HIS B 342 REMARK 465 HIS B 343 REMARK 465 HIS B 344 REMARK 465 SER B 345 REMARK 465 SER B 346 REMARK 465 GLY B 347 REMARK 465 LEU B 348 REMARK 465 VAL B 349 REMARK 465 PRO B 350 REMARK 465 ARG B 351 REMARK 465 GLY B 352 REMARK 465 SER B 353 REMARK 465 LEU B 354 REMARK 465 HIS B 355 REMARK 465 ARG B 505 REMARK 465 PHE B 506 REMARK 465 VAL B 507 REMARK 465 LEU B 508 REMARK 465 ASP B 509 REMARK 465 ASP B 510 REMARK 465 GLN B 511 REMARK 465 TYR B 512 REMARK 465 THR B 513 REMARK 465 SER B 514 REMARK 465 SER B 515 REMARK 465 THR B 516 REMARK 465 GLY B 517 REMARK 465 THR B 518 REMARK 465 LYS B 519 REMARK 465 PHE B 520 REMARK 465 GLU B 617 REMARK 465 SER B 618 REMARK 465 GLY B 619 REMARK 465 LEU B 620 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO B 521 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 3 O HOH A 763 1.56 REMARK 500 N VAL A 357 O HOH A 641 1.86 REMARK 500 N HIS A 355 O HOH A 649 1.95 REMARK 500 O HOH B 243 O HOH B 760 1.97 REMARK 500 O HOH B 622 O HOH B 743 1.97 REMARK 500 O HOH B 321 O HOH B 746 1.97 REMARK 500 CA SER B 361 O HOH B 717 2.02 REMARK 500 O HOH B 242 O HOH B 719 2.06 REMARK 500 O HOH B 235 O HOH B 735 2.06 REMARK 500 ND1 HIS A 378 O HOH A 644 2.07 REMARK 500 O HOH B 625 O HOH B 743 2.09 REMARK 500 OE2 GLU B 457 O HOH B 737 2.10 REMARK 500 O HOH A 641 O HOH A 642 2.15 REMARK 500 O HOH B 236 O HOH B 756 2.15 REMARK 500 O HOH B 667 O HOH B 756 2.16 REMARK 500 O SER A 361 O HOH A 19 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU B 597 OE2 GLU B 597 2656 1.14 REMARK 500 O HOH A 38 O HOH B 761 4545 1.93 REMARK 500 OE2 GLU A 400 OE2 GLU A 400 2555 1.97 REMARK 500 CD GLU B 597 OE2 GLU B 597 2656 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 356 87.04 -7.00 REMARK 500 VAL A 357 104.74 84.58 REMARK 500 PRO A 360 -78.88 -90.03 REMARK 500 SER A 361 45.13 -156.26 REMARK 500 GLN A 373 110.73 -21.15 REMARK 500 PHE A 374 -34.32 157.71 REMARK 500 LYS A 385 -57.42 -136.60 REMARK 500 MET A 398 133.06 -171.31 REMARK 500 GLN A 428 125.75 78.24 REMARK 500 ALA A 429 6.60 175.14 REMARK 500 ARG A 481 -6.04 77.34 REMARK 500 ASP A 482 43.17 -149.17 REMARK 500 ASN A 493 14.28 98.73 REMARK 500 ASN A 561 63.72 -107.88 REMARK 500 VAL B 357 75.41 -108.20 REMARK 500 PRO B 360 -127.28 -102.07 REMARK 500 SER B 361 41.01 -86.87 REMARK 500 LYS B 385 -52.52 -122.92 REMARK 500 GLU B 395 -44.74 10.65 REMARK 500 SER B 397 15.33 -150.82 REMARK 500 GLU B 427 -98.40 -53.97 REMARK 500 ALA B 429 -116.31 24.04 REMARK 500 ARG B 481 -0.93 75.14 REMARK 500 ASP B 482 35.86 -153.02 REMARK 500 ASN B 493 1.84 107.23 REMARK 500 ASP B 500 71.70 61.20 REMARK 500 PHE B 501 31.78 -99.64 REMARK 500 MET B 503 20.96 45.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PQC A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE L7O B 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QGW RELATED DB: PDB DBREF 3QGY A 357 620 UNP Q08881 ITK_HUMAN 357 620 DBREF 3QGY B 357 620 UNP Q08881 ITK_HUMAN 357 620 SEQADV 3QGY MET A 335 UNP Q08881 EXPRESSION TAG SEQADV 3QGY GLY A 336 UNP Q08881 EXPRESSION TAG SEQADV 3QGY SER A 337 UNP Q08881 EXPRESSION TAG SEQADV 3QGY SER A 338 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS A 339 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS A 340 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS A 341 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS A 342 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS A 343 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS A 344 UNP Q08881 EXPRESSION TAG SEQADV 3QGY SER A 345 UNP Q08881 EXPRESSION TAG SEQADV 3QGY SER A 346 UNP Q08881 EXPRESSION TAG SEQADV 3QGY GLY A 347 UNP Q08881 EXPRESSION TAG SEQADV 3QGY LEU A 348 UNP Q08881 EXPRESSION TAG SEQADV 3QGY VAL A 349 UNP Q08881 EXPRESSION TAG SEQADV 3QGY PRO A 350 UNP Q08881 EXPRESSION TAG SEQADV 3QGY ARG A 351 UNP Q08881 EXPRESSION TAG SEQADV 3QGY GLY A 352 UNP Q08881 EXPRESSION TAG SEQADV 3QGY SER A 353 UNP Q08881 EXPRESSION TAG SEQADV 3QGY LEU A 354 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS A 355 UNP Q08881 EXPRESSION TAG SEQADV 3QGY MET A 356 UNP Q08881 EXPRESSION TAG SEQADV 3QGY LYS A 394 UNP Q08881 ARG 394 CONFLICT SEQADV 3QGY SER A 397 UNP Q08881 ALA 397 CONFLICT SEQADV 3QGY ASP A 401 UNP Q08881 GLU 401 CONFLICT SEQADV 3QGY MET B 335 UNP Q08881 EXPRESSION TAG SEQADV 3QGY GLY B 336 UNP Q08881 EXPRESSION TAG SEQADV 3QGY SER B 337 UNP Q08881 EXPRESSION TAG SEQADV 3QGY SER B 338 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS B 339 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS B 340 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS B 341 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS B 342 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS B 343 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS B 344 UNP Q08881 EXPRESSION TAG SEQADV 3QGY SER B 345 UNP Q08881 EXPRESSION TAG SEQADV 3QGY SER B 346 UNP Q08881 EXPRESSION TAG SEQADV 3QGY GLY B 347 UNP Q08881 EXPRESSION TAG SEQADV 3QGY LEU B 348 UNP Q08881 EXPRESSION TAG SEQADV 3QGY VAL B 349 UNP Q08881 EXPRESSION TAG SEQADV 3QGY PRO B 350 UNP Q08881 EXPRESSION TAG SEQADV 3QGY ARG B 351 UNP Q08881 EXPRESSION TAG SEQADV 3QGY GLY B 352 UNP Q08881 EXPRESSION TAG SEQADV 3QGY SER B 353 UNP Q08881 EXPRESSION TAG SEQADV 3QGY LEU B 354 UNP Q08881 EXPRESSION TAG SEQADV 3QGY HIS B 355 UNP Q08881 EXPRESSION TAG SEQADV 3QGY MET B 356 UNP Q08881 EXPRESSION TAG SEQADV 3QGY LYS B 394 UNP Q08881 ARG 394 CONFLICT SEQADV 3QGY SER B 397 UNP Q08881 ALA 397 CONFLICT SEQADV 3QGY ASP B 401 UNP Q08881 GLU 401 CONFLICT SEQRES 1 A 286 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 286 LEU VAL PRO ARG GLY SER LEU HIS MET VAL ILE ASP PRO SEQRES 3 A 286 SER GLU LEU THR PHE VAL GLN GLU ILE GLY SER GLY GLN SEQRES 4 A 286 PHE GLY LEU VAL HIS LEU GLY TYR TRP LEU ASN LYS ASP SEQRES 5 A 286 LYS VAL ALA ILE LYS THR ILE LYS GLU GLY SER MET SER SEQRES 6 A 286 GLU ASP ASP PHE ILE GLU GLU ALA GLU VAL MET MET LYS SEQRES 7 A 286 LEU SER HIS PRO LYS LEU VAL GLN LEU TYR GLY VAL CYS SEQRES 8 A 286 LEU GLU GLN ALA PRO ILE CYS LEU VAL PHE GLU PHE MET SEQRES 9 A 286 GLU HIS GLY CYS LEU SER ASP TYR LEU ARG THR GLN ARG SEQRES 10 A 286 GLY LEU PHE ALA ALA GLU THR LEU LEU GLY MET CYS LEU SEQRES 11 A 286 ASP VAL CYS GLU GLY MET ALA TYR LEU GLU GLU ALA CYS SEQRES 12 A 286 VAL ILE HIS ARG ASP LEU ALA ALA ARG ASN CYS LEU VAL SEQRES 13 A 286 GLY GLU ASN GLN VAL ILE LYS VAL SER ASP PHE GLY MET SEQRES 14 A 286 THR ARG PHE VAL LEU ASP ASP GLN TYR THR SER SER THR SEQRES 15 A 286 GLY THR LYS PHE PRO VAL LYS TRP ALA SER PRO GLU VAL SEQRES 16 A 286 PHE SER PHE SER ARG TYR SER SER LYS SER ASP VAL TRP SEQRES 17 A 286 SER PHE GLY VAL LEU MET TRP GLU VAL PHE SER GLU GLY SEQRES 18 A 286 LYS ILE PRO TYR GLU ASN ARG SER ASN SER GLU VAL VAL SEQRES 19 A 286 GLU ASP ILE SER THR GLY PHE ARG LEU TYR LYS PRO ARG SEQRES 20 A 286 LEU ALA SER THR HIS VAL TYR GLN ILE MET ASN HIS CYS SEQRES 21 A 286 TRP LYS GLU ARG PRO GLU ASP ARG PRO ALA PHE SER ARG SEQRES 22 A 286 LEU LEU ARG GLN LEU ALA GLU ILE ALA GLU SER GLY LEU SEQRES 1 B 286 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 286 LEU VAL PRO ARG GLY SER LEU HIS MET VAL ILE ASP PRO SEQRES 3 B 286 SER GLU LEU THR PHE VAL GLN GLU ILE GLY SER GLY GLN SEQRES 4 B 286 PHE GLY LEU VAL HIS LEU GLY TYR TRP LEU ASN LYS ASP SEQRES 5 B 286 LYS VAL ALA ILE LYS THR ILE LYS GLU GLY SER MET SER SEQRES 6 B 286 GLU ASP ASP PHE ILE GLU GLU ALA GLU VAL MET MET LYS SEQRES 7 B 286 LEU SER HIS PRO LYS LEU VAL GLN LEU TYR GLY VAL CYS SEQRES 8 B 286 LEU GLU GLN ALA PRO ILE CYS LEU VAL PHE GLU PHE MET SEQRES 9 B 286 GLU HIS GLY CYS LEU SER ASP TYR LEU ARG THR GLN ARG SEQRES 10 B 286 GLY LEU PHE ALA ALA GLU THR LEU LEU GLY MET CYS LEU SEQRES 11 B 286 ASP VAL CYS GLU GLY MET ALA TYR LEU GLU GLU ALA CYS SEQRES 12 B 286 VAL ILE HIS ARG ASP LEU ALA ALA ARG ASN CYS LEU VAL SEQRES 13 B 286 GLY GLU ASN GLN VAL ILE LYS VAL SER ASP PHE GLY MET SEQRES 14 B 286 THR ARG PHE VAL LEU ASP ASP GLN TYR THR SER SER THR SEQRES 15 B 286 GLY THR LYS PHE PRO VAL LYS TRP ALA SER PRO GLU VAL SEQRES 16 B 286 PHE SER PHE SER ARG TYR SER SER LYS SER ASP VAL TRP SEQRES 17 B 286 SER PHE GLY VAL LEU MET TRP GLU VAL PHE SER GLU GLY SEQRES 18 B 286 LYS ILE PRO TYR GLU ASN ARG SER ASN SER GLU VAL VAL SEQRES 19 B 286 GLU ASP ILE SER THR GLY PHE ARG LEU TYR LYS PRO ARG SEQRES 20 B 286 LEU ALA SER THR HIS VAL TYR GLN ILE MET ASN HIS CYS SEQRES 21 B 286 TRP LYS GLU ARG PRO GLU ASP ARG PRO ALA PHE SER ARG SEQRES 22 B 286 LEU LEU ARG GLN LEU ALA GLU ILE ALA GLU SER GLY LEU HET PQC A 1 30 HET L7O B 1 30 HETNAM PQC 3-[(8-PHENYLTHIENO[2,3-H]QUINAZOLIN-2-YL) HETNAM 2 PQC AMINO]BENZENESULFONAMIDE HETNAM L7O N-{5-[2-(METHYLAMINO)PYRIMIDIN-4-YL]-2-OXO-1,2- HETNAM 2 L7O DIHYDROPYRIDIN-3-YL}-4-(PIPERIDIN-1-YL)BENZAMIDE HETSYN L7O 3-(4-(PIPERIDIN-1-YL)BENZOYLAMINO)-5-(2-(METHYLAMINO) HETSYN 2 L7O PYRIMIDIN-4-YL)-(1H)-PYRIDIN-2-ONE FORMUL 3 PQC C22 H16 N4 O2 S2 FORMUL 4 L7O C22 H24 N6 O2 FORMUL 5 HOH *509(H2 O) HELIX 1 1 SER A 399 LEU A 413 1 15 HELIX 2 2 CYS A 442 GLN A 450 1 9 HELIX 3 3 ALA A 455 ALA A 476 1 22 HELIX 4 4 ALA A 484 ARG A 486 5 3 HELIX 5 5 SER A 526 SER A 533 1 8 HELIX 6 6 SER A 536 SER A 553 1 18 HELIX 7 7 SER A 563 THR A 573 1 11 HELIX 8 8 SER A 584 TRP A 595 1 12 HELIX 9 9 ARG A 598 ARG A 602 5 5 HELIX 10 10 ALA A 604 GLU A 617 1 14 HELIX 11 11 SER B 399 MET B 411 1 13 HELIX 12 12 CYS B 442 GLN B 450 1 9 HELIX 13 13 ALA B 455 ALA B 476 1 22 HELIX 14 14 ALA B 484 ARG B 486 5 3 HELIX 15 15 PRO B 521 ALA B 525 5 5 HELIX 16 16 SER B 526 SER B 533 1 8 HELIX 17 17 SER B 536 SER B 553 1 18 HELIX 18 18 SER B 563 THR B 573 1 11 HELIX 19 19 SER B 584 TRP B 595 1 12 HELIX 20 20 ARG B 598 ARG B 602 5 5 HELIX 21 21 ALA B 604 ALA B 616 1 13 SHEET 1 A 5 LEU A 363 GLY A 372 0 SHEET 2 A 5 GLY A 375 TRP A 382 -1 O VAL A 377 N ILE A 369 SHEET 3 A 5 ASP A 386 ILE A 393 -1 O VAL A 388 N GLY A 380 SHEET 4 A 5 CYS A 432 GLU A 436 -1 O LEU A 433 N LYS A 391 SHEET 5 A 5 LEU A 421 CYS A 425 -1 N TYR A 422 O VAL A 434 SHEET 1 B 2 CYS A 488 VAL A 490 0 SHEET 2 B 2 ILE A 496 VAL A 498 -1 O LYS A 497 N LEU A 489 SHEET 1 C 5 LEU B 363 GLY B 372 0 SHEET 2 C 5 GLY B 375 TRP B 382 -1 O VAL B 377 N ILE B 369 SHEET 3 C 5 ASP B 386 ILE B 393 -1 O VAL B 388 N GLY B 380 SHEET 4 C 5 CYS B 432 GLU B 436 -1 O PHE B 435 N ALA B 389 SHEET 5 C 5 LEU B 421 CYS B 425 -1 N CYS B 425 O CYS B 432 SHEET 1 D 2 CYS B 488 VAL B 490 0 SHEET 2 D 2 ILE B 496 VAL B 498 -1 O LYS B 497 N LEU B 489 CISPEP 1 ALA A 429 PRO A 430 0 3.38 SITE 1 AC1 14 ILE A 369 GLY A 370 VAL A 377 ALA A 389 SITE 2 AC1 14 LYS A 391 PHE A 435 GLU A 436 PHE A 437 SITE 3 AC1 14 MET A 438 GLY A 441 CYS A 442 LEU A 489 SITE 4 AC1 14 PHE B 365 VAL B 366 SITE 1 AC2 13 ILE B 369 ALA B 389 LYS B 391 GLU B 406 SITE 2 AC2 13 VAL B 419 PHE B 435 GLU B 436 PHE B 437 SITE 3 AC2 13 MET B 438 GLU B 439 GLY B 441 LEU B 489 SITE 4 AC2 13 ASP B 500 CRYST1 125.860 74.381 78.833 90.00 93.99 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007945 0.000000 0.000554 0.00000 SCALE2 0.000000 0.013444 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012716 0.00000