PDB Short entry for 3QQN HEADER CELL ADHESION 15-FEB-11 3QQN TITLE THE RETINAL SPECIFIC CD147 IG0 DOMAIN: FROM MOLECULAR STRUCTURE TO TITLE 2 BIOLOGICAL ACTIVITY COMPND MOL_ID: 1; COMPND 2 MOLECULE: BASIGIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 23-138; COMPND 5 SYNONYM: 5F7, COLLAGENASE STIMULATORY FACTOR, EXTRACELLULAR MATRIX COMPND 6 METALLOPROTEINASE INDUCER, EMMPRIN, LEUKOCYTE ACTIVATION ANTIGEN M6, COMPND 7 OK BLOOD GROUP ANTIGEN, TUMOR CELL-DERIVED COLLAGENASE STIMULATORY COMPND 8 FACTOR, TCSF; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BSG, UNQ6505/PRO21383; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CD147, EMMPRIN, IMMUNOGLOBULIN-LIKE DOMAIN, BETA SHEET, CELL KEYWDS 2 ADHESION, STRUCTURAL GENOMICS, BERKELEY STRUCTURAL GENOMICS CENTER, KEYWDS 3 BSGC EXPDTA X-RAY DIFFRACTION AUTHOR J.S.REDZIC,G.S.ARMSTRONG,N.G.ISERN,J.S.KIEFT,E.Z.EISENMESSER,BERKELEY AUTHOR 2 STRUCTURAL GENOMICS CENTER (BSGC) REVDAT 2 17-AUG-11 3QQN 1 JRNL VERSN REVDAT 1 11-MAY-11 3QQN 0 JRNL AUTH J.S.REDZIC,G.S.ARMSTRONG,N.G.ISERN,D.N.JONES,J.S.KIEFT, JRNL AUTH 2 E.Z.EISENMESSER JRNL TITL THE RETINAL SPECIFIC CD147 IG0 DOMAIN: FROM MOLECULAR JRNL TITL 2 STRUCTURE TO BIOLOGICAL ACTIVITY. JRNL REF J.MOL.BIOL. V. 411 68 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21620857 JRNL DOI 10.1016/J.JMB.2011.04.060 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 13954 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1395 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.4200 - 4.9714 1.00 1403 158 0.2444 0.2868 REMARK 3 2 4.9714 - 3.9469 1.00 1316 143 0.1867 0.2047 REMARK 3 3 3.9469 - 3.4482 1.00 1276 143 0.2435 0.2624 REMARK 3 4 3.4482 - 3.1331 1.00 1255 139 0.2411 0.3018 REMARK 3 5 3.1331 - 2.9086 1.00 1256 137 0.2468 0.2719 REMARK 3 6 2.9086 - 2.7371 1.00 1250 142 0.2419 0.2614 REMARK 3 7 2.7371 - 2.6001 1.00 1238 136 0.2355 0.2902 REMARK 3 8 2.6001 - 2.4869 1.00 1236 137 0.2638 0.2914 REMARK 3 9 2.4869 - 2.3912 1.00 1230 139 0.2571 0.3283 REMARK 3 10 2.3912 - 2.3090 0.89 1099 121 0.2895 0.3352 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.61 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 40.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.25440 REMARK 3 B22 (A**2) : -2.25440 REMARK 3 B33 (A**2) : 4.50890 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 1888 REMARK 3 ANGLE : 1.353 2578 REMARK 3 CHIRALITY : 0.099 278 REMARK 3 PLANARITY : 0.007 340 REMARK 3 DIHEDRAL : 17.033 664 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: chain A and (resseq 2:96 or resseq 103: REMARK 3 117 ) REMARK 3 SELECTION : chain B and (resseq 2:96 or resseq 103: REMARK 3 117 ) REMARK 3 ATOM PAIRS NUMBER : 870 REMARK 3 RMSD : 0.069 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QQN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-11. REMARK 100 THE RCSB ID CODE IS RCSB063980. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.02159,1.02195,1.03726 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE SI111 REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14020 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.309 REMARK 200 RESOLUTION RANGE LOW (A) : 42.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX (PHENIX.REFINE:1.5_2) REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 20% PEG 3350, REMARK 280 0.1M SPERMIDINE TETRACHLORIDE, PH 7, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.11333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.55667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 80.33500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 26.77833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 133.89167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 107.11333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 53.55667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 26.77833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 80.33500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 133.89167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 125 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MSE B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 100 CG CD NE CZ NH1 NH2 REMARK 470 THR B 99 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 122 O HOH B 154 1.93 REMARK 500 O HOH B 129 O HOH B 137 1.97 REMARK 500 O HOH A 186 O HOH A 187 2.05 REMARK 500 NH1 ARG A 57 O HOH A 134 2.06 REMARK 500 O HOH A 161 O HOH A 191 2.10 REMARK 500 OD2 ASP A 51 O HOH A 122 2.13 REMARK 500 NH2 ARG A 57 O HOH A 141 2.13 REMARK 500 O HOH A 175 O HOH A 182 2.13 REMARK 500 O HOH A 155 O HOH A 191 2.14 REMARK 500 NH1 ARG B 57 O HOH B 138 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 HIS A 97 O MSE B 46 5555 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 42 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 ARG A 103 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 PRO B 42 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 42 5.93 -53.78 REMARK 500 GLN A 66 -41.36 70.59 REMARK 500 HIS A 97 -115.35 68.65 REMARK 500 LEU A 98 157.87 63.61 REMARK 500 THR A 99 129.21 71.17 REMARK 500 ALA A 101 79.49 -67.12 REMARK 500 ARG A 103 69.60 -155.69 REMARK 500 PRO B 42 6.17 -54.96 REMARK 500 GLN B 66 -45.43 70.01 REMARK 500 HIS B 97 80.59 -69.57 REMARK 500 LEU B 98 55.11 -58.08 REMARK 500 THR B 99 -44.68 65.90 REMARK 500 ARG B 100 111.62 -35.58 REMARK 500 ALA B 101 27.57 -79.51 REMARK 500 PRO B 102 52.68 -94.20 REMARK 500 ARG B 103 74.81 13.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 101 PRO A 102 -135.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 THR A 99 24.0 L L OUTSIDE RANGE REMARK 500 ARG A 103 23.3 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QR2 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AS PER AUTHORS ILE IS THE CORRECT RESIDUE AT POSITION 45 DBREF 3QQN A 2 117 UNP P35613 BASI_HUMAN 23 138 DBREF 3QQN B 2 117 UNP P35613 BASI_HUMAN 23 138 SEQADV 3QQN MSE A -19 UNP P35613 EXPRESSION TAG SEQADV 3QQN GLY A -18 UNP P35613 EXPRESSION TAG SEQADV 3QQN SER A -17 UNP P35613 EXPRESSION TAG SEQADV 3QQN SER A -16 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS A -15 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS A -14 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS A -13 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS A -12 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS A -11 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS A -10 UNP P35613 EXPRESSION TAG SEQADV 3QQN SER A -9 UNP P35613 EXPRESSION TAG SEQADV 3QQN SER A -8 UNP P35613 EXPRESSION TAG SEQADV 3QQN GLY A -7 UNP P35613 EXPRESSION TAG SEQADV 3QQN LEU A -6 UNP P35613 EXPRESSION TAG SEQADV 3QQN VAL A -5 UNP P35613 EXPRESSION TAG SEQADV 3QQN PRO A -4 UNP P35613 EXPRESSION TAG SEQADV 3QQN ARG A -3 UNP P35613 EXPRESSION TAG SEQADV 3QQN GLY A -2 UNP P35613 EXPRESSION TAG SEQADV 3QQN SER A -1 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS A 0 UNP P35613 EXPRESSION TAG SEQADV 3QQN MSE A 1 UNP P35613 EXPRESSION TAG SEQADV 3QQN ILE A 45 UNP P35613 THR 66 SEE REMARK 999 SEQADV 3QQN MSE A 46 UNP P35613 CYS 67 ENGINEERED MUTATION SEQADV 3QQN MSE B -19 UNP P35613 EXPRESSION TAG SEQADV 3QQN GLY B -18 UNP P35613 EXPRESSION TAG SEQADV 3QQN SER B -17 UNP P35613 EXPRESSION TAG SEQADV 3QQN SER B -16 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS B -15 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS B -14 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS B -13 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS B -12 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS B -11 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS B -10 UNP P35613 EXPRESSION TAG SEQADV 3QQN SER B -9 UNP P35613 EXPRESSION TAG SEQADV 3QQN SER B -8 UNP P35613 EXPRESSION TAG SEQADV 3QQN GLY B -7 UNP P35613 EXPRESSION TAG SEQADV 3QQN LEU B -6 UNP P35613 EXPRESSION TAG SEQADV 3QQN VAL B -5 UNP P35613 EXPRESSION TAG SEQADV 3QQN PRO B -4 UNP P35613 EXPRESSION TAG SEQADV 3QQN ARG B -3 UNP P35613 EXPRESSION TAG SEQADV 3QQN GLY B -2 UNP P35613 EXPRESSION TAG SEQADV 3QQN SER B -1 UNP P35613 EXPRESSION TAG SEQADV 3QQN HIS B 0 UNP P35613 EXPRESSION TAG SEQADV 3QQN MSE B 1 UNP P35613 EXPRESSION TAG SEQADV 3QQN ILE B 45 UNP P35613 THR 66 SEE REMARK 999 SEQADV 3QQN MSE B 46 UNP P35613 CYS 67 ENGINEERED MUTATION SEQRES 1 A 137 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 137 LEU VAL PRO ARG GLY SER HIS MSE ALA GLY PHE VAL GLN SEQRES 3 A 137 ALA PRO LEU SER GLN GLN ARG TRP VAL GLY GLY SER VAL SEQRES 4 A 137 GLU LEU HIS CYS GLU ALA VAL GLY SER PRO VAL PRO GLU SEQRES 5 A 137 ILE GLN TRP TRP PHE GLU GLY GLN GLY PRO ASN ASP ILE SEQRES 6 A 137 MSE SER GLN LEU TRP ASP GLY ALA ARG LEU ASP ARG VAL SEQRES 7 A 137 HIS ILE HIS ALA THR TYR HIS GLN HIS ALA ALA SER THR SEQRES 8 A 137 ILE SER ILE ASP THR LEU VAL GLU GLU ASP THR GLY THR SEQRES 9 A 137 TYR GLU CYS ARG ALA SER ASN ASP PRO ASP ARG ASN HIS SEQRES 10 A 137 LEU THR ARG ALA PRO ARG VAL LYS TRP VAL ARG ALA GLN SEQRES 11 A 137 ALA VAL VAL LEU VAL LEU GLU SEQRES 1 B 137 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 137 LEU VAL PRO ARG GLY SER HIS MSE ALA GLY PHE VAL GLN SEQRES 3 B 137 ALA PRO LEU SER GLN GLN ARG TRP VAL GLY GLY SER VAL SEQRES 4 B 137 GLU LEU HIS CYS GLU ALA VAL GLY SER PRO VAL PRO GLU SEQRES 5 B 137 ILE GLN TRP TRP PHE GLU GLY GLN GLY PRO ASN ASP ILE SEQRES 6 B 137 MSE SER GLN LEU TRP ASP GLY ALA ARG LEU ASP ARG VAL SEQRES 7 B 137 HIS ILE HIS ALA THR TYR HIS GLN HIS ALA ALA SER THR SEQRES 8 B 137 ILE SER ILE ASP THR LEU VAL GLU GLU ASP THR GLY THR SEQRES 9 B 137 TYR GLU CYS ARG ALA SER ASN ASP PRO ASP ARG ASN HIS SEQRES 10 B 137 LEU THR ARG ALA PRO ARG VAL LYS TRP VAL ARG ALA GLN SEQRES 11 B 137 ALA VAL VAL LEU VAL LEU GLU MODRES 3QQN MSE A 1 MET SELENOMETHIONINE MODRES 3QQN MSE A 46 MET SELENOMETHIONINE MODRES 3QQN MSE B 46 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 46 8 HET MSE B 46 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 3 HOH *158(H2 O) HELIX 1 1 GLY A 52 ARG A 57 1 6 HELIX 2 2 VAL A 78 THR A 82 5 5 HELIX 3 3 GLY B 52 ARG B 57 1 6 HELIX 4 4 VAL B 78 THR B 82 5 5 SHEET 1 A 4 ALA A 2 GLN A 6 0 SHEET 2 A 4 VAL A 19 GLY A 27 -1 O GLU A 24 N GLN A 6 SHEET 3 A 4 ALA A 68 ILE A 74 -1 O ALA A 68 N ALA A 25 SHEET 4 A 4 VAL A 58 THR A 63 -1 N HIS A 59 O SER A 73 SHEET 1 B 5 GLN A 11 TRP A 14 0 SHEET 2 B 5 VAL A 107 LEU A 116 1 O LEU A 114 N ARG A 13 SHEET 3 B 5 GLY A 83 SER A 90 -1 N TYR A 85 O ALA A 111 SHEET 4 B 5 GLU A 32 GLU A 38 -1 N GLU A 32 O SER A 90 SHEET 5 B 5 SER A 47 GLN A 48 -1 O SER A 47 N PHE A 37 SHEET 1 C 4 GLY B 3 GLN B 6 0 SHEET 2 C 4 VAL B 19 VAL B 26 -1 O GLU B 24 N GLN B 6 SHEET 3 C 4 ALA B 68 ILE B 74 -1 O ALA B 68 N ALA B 25 SHEET 4 C 4 VAL B 58 THR B 63 -1 N HIS B 59 O SER B 73 SHEET 1 D 5 GLN B 11 TRP B 14 0 SHEET 2 D 5 VAL B 107 LEU B 116 1 O LEU B 114 N ARG B 13 SHEET 3 D 5 GLY B 83 SER B 90 -1 N TYR B 85 O ALA B 111 SHEET 4 D 5 GLU B 32 GLU B 38 -1 N GLU B 38 O THR B 84 SHEET 5 D 5 SER B 47 GLN B 48 -1 O SER B 47 N PHE B 37 SSBOND 1 CYS A 23 CYS A 87 1555 1555 2.03 SSBOND 2 CYS B 23 CYS B 87 1555 1555 2.03 LINK C MSE A 1 N ALA A 2 1555 1555 1.32 LINK C ILE A 45 N MSE A 46 1555 1555 1.33 LINK C MSE A 46 N SER A 47 1555 1555 1.33 LINK C ILE B 45 N MSE B 46 1555 1555 1.33 LINK C MSE B 46 N SER B 47 1555 1555 1.33 CISPEP 1 SER A 28 PRO A 29 0 -0.51 CISPEP 2 LEU A 98 THR A 99 0 22.56 CISPEP 3 SER B 28 PRO B 29 0 1.26 CRYST1 80.240 80.240 160.670 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012463 0.007195 0.000000 0.00000 SCALE2 0.000000 0.014391 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006224 0.00000 HETATM 1 N MSE A 1 12.271 27.773 107.562 1.00 39.27 N HETATM 2 CA MSE A 1 12.381 27.078 106.290 1.00 35.18 C HETATM 3 C MSE A 1 13.829 27.178 105.852 1.00 44.00 C HETATM 4 O MSE A 1 14.651 27.828 106.506 1.00 44.86 O HETATM 5 CB MSE A 1 11.514 27.778 105.246 1.00 51.33 C HETATM 6 CG MSE A 1 12.182 29.034 104.669 1.00 55.03 C HETATM 7 SE MSE A 1 10.954 30.491 104.167 1.00 72.74 SE HETATM 8 CE MSE A 1 9.348 29.366 103.942 1.00 51.17 C