PDB Short entry for 3RMP
HEADER    DNA BINDING PROTEIN/DNA                 21-APR-11   3RMP              
TITLE     STRUCTURAL BASIS FOR THE RECOGNITION OF ATTP SUBSTRATES BY P4-LIKE    
TITLE    2 INTEGRASES                                                           
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: CP4-LIKE INTEGRASE;                                        
COMPND   3 CHAIN: A, C;                                                         
COMPND   4 FRAGMENT: ARM-TYPE BINDING DOMAIN (UNP RESIDUES 1-80);               
COMPND   5 SYNONYM: HPI INTEGRASE, INT PROTEIN, PROPHAGE INTEGRASE;             
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MOL_ID: 2;                                                           
COMPND   8 MOLECULE: 5'-D(*TP*AP*AP*TP*GP*AP*CP*CP*AP*CP*CP*AP*AP*TP*A)-3';     
COMPND   9 CHAIN: E, G;                                                         
COMPND  10 ENGINEERED: YES;                                                     
COMPND  11 MOL_ID: 3;                                                           
COMPND  12 MOLECULE: 5'-D(*TP*AP*TP*TP*GP*GP*TP*GP*GP*TP*CP*AP*TP*TP*A)-3';     
COMPND  13 CHAIN: F, H;                                                         
COMPND  14 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS;                                
SOURCE   3 ORGANISM_TAXID: 632;                                                 
SOURCE   4 GENE: INT, INT2, YPO1917, YP_1660, Y2393;                            
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 511693;                                     
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21;                                      
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PET 21;                                   
SOURCE  10 MOL_ID: 2;                                                           
SOURCE  11 SYNTHETIC: YES;                                                      
SOURCE  12 MOL_ID: 3;                                                           
SOURCE  13 SYNTHETIC: YES                                                       
KEYWDS    DNA BINDING PROTEIN-DNA COMPLEX                                       
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    A.SZWAGIERCZAK,G.M.POPOWICZ,T.A.HOLAK,A.RAKIN,U.ANTONENKA             
REVDAT   2   13-SEP-23 3RMP    1       SEQADV                                   
REVDAT   1   25-APR-12 3RMP    0                                                
JRNL        AUTH   A.SZWAGIERCZAK,G.M.POPOWICZ,T.A.HOLAK,A.RAKIN,U.ANTONENKA    
JRNL        TITL   STRUCTURAL BASIS FOR THE RECOGNITION OF ATTP SUBSTRATES BY   
JRNL        TITL 2 P4-LIKE INTEGRASES                                           
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.21 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.5.0072                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 19.73                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 75.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 13182                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.236                           
REMARK   3   R VALUE            (WORKING SET) : 0.234                           
REMARK   3   FREE R VALUE                     : 0.280                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 695                             
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.21                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.27                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 500                          
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 39.73                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.3380                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 32                           
REMARK   3   BIN FREE R VALUE                    : 0.3710                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 1184                                    
REMARK   3   NUCLEIC ACID ATOMS       : 1119                                    
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 45                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 25.70                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.27000                                             
REMARK   3    B22 (A**2) : 0.17000                                              
REMARK   3    B33 (A**2) : 0.10000                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.455         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.292         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.193         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.685         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.893                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.856                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  2458 ; 0.008 ; 0.021       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  3546 ; 2.847 ; 2.536       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   149 ; 6.153 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):    47 ;35.927 ;21.064       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   219 ;17.414 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    13 ;17.130 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   396 ; 0.370 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  1460 ; 0.004 ; 0.021       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):   752 ; 0.618 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  1195 ; 1.143 ; 2.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1706 ; 1.112 ; 3.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  2351 ; 1.902 ; 4.500       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.40                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS:                                           
REMARK   3  HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS                   
REMARK   3  U VALUES      : REFINED INDIVIDUALLY                                
REMARK   4                                                                      
REMARK   4 3RMP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-APR-11.                  
REMARK 100 THE DEPOSITION ID IS D_1000065121.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 12-AUG-09                          
REMARK 200  TEMPERATURE           (KELVIN) : 90                                 
REMARK 200  PH                             : 5.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SLS                                
REMARK 200  BEAMLINE                       : X10SA                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9873                             
REMARK 200  MONOCHROMATOR                  : SI                                 
REMARK 200  OPTICS                         : MONOCHROMATOR, MIRROR              
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 14688                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.100                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 45.800                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 2.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 81.5                               
REMARK 200  DATA REDUNDANCY                : 4.200                              
REMARK 200  R MERGE                    (I) : 0.06600                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 17.0900                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: PDB ENTRY 3JTZ                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 46.47                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 65% MPD, 0.1 M SODIUM ACETATE, PH 5.0,   
REMARK 280  VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K                     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       30.45000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       41.87000            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       34.74500            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       41.87000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       30.45000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       34.74500            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 7720 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 15530 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, F, G, H                      
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     ILE A    79                                                      
REMARK 465     ASN A    80                                                      
REMARK 465     LEU A    81                                                      
REMARK 465     GLU A    82                                                      
REMARK 465     HIS A    83                                                      
REMARK 465     HIS A    84                                                      
REMARK 465     HIS A    85                                                      
REMARK 465     HIS A    86                                                      
REMARK 465     HIS A    87                                                      
REMARK 465     HIS A    88                                                      
REMARK 465     MET C     1                                                      
REMARK 465     PRO C    13                                                      
REMARK 465     SER C    14                                                      
REMARK 465     ILE C    79                                                      
REMARK 465     ASN C    80                                                      
REMARK 465     LEU C    81                                                      
REMARK 465     GLU C    82                                                      
REMARK 465     HIS C    83                                                      
REMARK 465     HIS C    84                                                      
REMARK 465     HIS C    85                                                      
REMARK 465     HIS C    86                                                      
REMARK 465     HIS C    87                                                      
REMARK 465     HIS C    88                                                      
REMARK 465      DA E    15                                                      
REMARK 465      DT F     1                                                      
REMARK 465      DA F    15                                                      
REMARK 465      DT H     1                                                      
REMARK 465      DA H    15                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LYS A  12    CD   CE   NZ                                        
REMARK 470     LYS A  16    CE   NZ                                             
REMARK 470     ARG C   9    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS C  12    CG   CD   CE   NZ                                   
REMARK 470     LYS C  16    CG   CD   CE   NZ                                   
REMARK 470     LYS C  31    NZ                                                  
REMARK 470     LYS C  47    CD   CE   NZ                                        
REMARK 470      DT E   1    O5'                                                 
REMARK 470      DT G   1    O5'                                                 
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   NH1  ARG C    72     OP2   DG F     5              1.95            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DT E   1   C3' -  O3' -  P   ANGL. DEV. =  13.6 DEGREES          
REMARK 500     DA E   2   O3' -  P   -  O5' ANGL. DEV. = -15.4 DEGREES          
REMARK 500     DA E   2   O3' -  P   -  OP2 ANGL. DEV. = -20.6 DEGREES          
REMARK 500     DA E   2   O3' -  P   -  OP1 ANGL. DEV. = -15.7 DEGREES          
REMARK 500     DA E   6   O3' -  P   -  O5' ANGL. DEV. = -21.1 DEGREES          
REMARK 500     DA E   6   O3' -  P   -  OP2 ANGL. DEV. = -15.3 DEGREES          
REMARK 500     DA E   6   O3' -  P   -  OP1 ANGL. DEV. = -18.7 DEGREES          
REMARK 500     DC E   8   O3' -  P   -  O5' ANGL. DEV. = -18.0 DEGREES          
REMARK 500     DC E   8   O3' -  P   -  OP2 ANGL. DEV. = -13.7 DEGREES          
REMARK 500     DC E   8   O3' -  P   -  OP1 ANGL. DEV. = -21.6 DEGREES          
REMARK 500     DC E   8   O4' -  C1' -  N1  ANGL. DEV. =   5.8 DEGREES          
REMARK 500     DA E   9   O4' -  C1' -  N9  ANGL. DEV. =   2.6 DEGREES          
REMARK 500     DC E  10   O4' -  C1' -  N1  ANGL. DEV. =   2.5 DEGREES          
REMARK 500     DC E  10   C3' -  O3' -  P   ANGL. DEV. =   8.3 DEGREES          
REMARK 500     DC E  11   O3' -  P   -  O5' ANGL. DEV. = -16.7 DEGREES          
REMARK 500     DC E  11   O3' -  P   -  OP1 ANGL. DEV. = -25.9 DEGREES          
REMARK 500     DC E  11   OP1 -  P   -  OP2 ANGL. DEV. =   9.6 DEGREES          
REMARK 500     DC E  11   O5' -  P   -  OP1 ANGL. DEV. =   8.3 DEGREES          
REMARK 500     DC E  11   O4' -  C1' -  N1  ANGL. DEV. =   2.3 DEGREES          
REMARK 500     DA E  12   O3' -  P   -  O5' ANGL. DEV. = -22.2 DEGREES          
REMARK 500     DA E  12   O3' -  P   -  OP2 ANGL. DEV. = -17.5 DEGREES          
REMARK 500     DA E  12   OP1 -  P   -  OP2 ANGL. DEV. =   9.6 DEGREES          
REMARK 500     DA E  12   O5' -  P   -  OP2 ANGL. DEV. =   9.0 DEGREES          
REMARK 500     DA E  12   O4' -  C1' -  N9  ANGL. DEV. =  -4.8 DEGREES          
REMARK 500     DA E  13   O4' -  C1' -  N9  ANGL. DEV. =   2.1 DEGREES          
REMARK 500     DA E  13   C3' -  O3' -  P   ANGL. DEV. =   8.2 DEGREES          
REMARK 500     DT F   4   O4' -  C1' -  N1  ANGL. DEV. =   2.5 DEGREES          
REMARK 500     DT F   7   C3' -  O3' -  P   ANGL. DEV. =   7.7 DEGREES          
REMARK 500     DG F   8   O3' -  P   -  O5' ANGL. DEV. = -22.8 DEGREES          
REMARK 500     DG F   8   O3' -  P   -  OP2 ANGL. DEV. = -13.5 DEGREES          
REMARK 500     DG F   8   O3' -  P   -  OP1 ANGL. DEV. = -20.4 DEGREES          
REMARK 500     DG F   8   O5' -  P   -  OP1 ANGL. DEV. =   7.9 DEGREES          
REMARK 500     DG F   8   C1' -  O4' -  C4' ANGL. DEV. =  -6.7 DEGREES          
REMARK 500     DG F   8   O4' -  C1' -  N9  ANGL. DEV. =   6.8 DEGREES          
REMARK 500     DG F   8   C3' -  O3' -  P   ANGL. DEV. =   9.5 DEGREES          
REMARK 500     DG F   9   O3' -  P   -  OP2 ANGL. DEV. = -17.4 DEGREES          
REMARK 500     DG F   9   O3' -  P   -  OP1 ANGL. DEV. = -19.2 DEGREES          
REMARK 500     DG F   9   OP1 -  P   -  OP2 ANGL. DEV. =  10.8 DEGREES          
REMARK 500     DG F   9   O4' -  C1' -  N9  ANGL. DEV. =   3.4 DEGREES          
REMARK 500     DC F  11   O3' -  P   -  O5' ANGL. DEV. = -18.1 DEGREES          
REMARK 500     DC F  11   O3' -  P   -  OP2 ANGL. DEV. = -14.0 DEGREES          
REMARK 500     DC F  11   O3' -  P   -  OP1 ANGL. DEV. = -22.7 DEGREES          
REMARK 500     DC F  11   O4' -  C1' -  N1  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DT G   1   O4' -  C1' -  N1  ANGL. DEV. =   3.9 DEGREES          
REMARK 500     DG G   5   C3' -  O3' -  P   ANGL. DEV. =   7.4 DEGREES          
REMARK 500     DA G   6   O3' -  P   -  O5' ANGL. DEV. = -19.5 DEGREES          
REMARK 500     DA G   6   O3' -  P   -  OP1 ANGL. DEV. = -20.6 DEGREES          
REMARK 500     DC G   7   C1' -  O4' -  C4' ANGL. DEV. =  -9.1 DEGREES          
REMARK 500     DC G   7   C3' -  C2' -  C1' ANGL. DEV. =  -5.8 DEGREES          
REMARK 500     DC G   7   O4' -  C1' -  N1  ANGL. DEV. =  10.1 DEGREES          
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      86 ANGLE DEVIATIONS.                             
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A  22      -96.95    -93.37                                   
REMARK 500    ALA A  76       10.15    -59.67                                   
REMARK 500    LEU C  11     -162.51    -74.37                                   
REMARK 500    ASP C  22      -90.53    -95.99                                   
REMARK 500    SER C  45       58.58     34.53                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3JTZ   RELATED DB: PDB                                   
REMARK 900 THE SAME PROTEIN WITHOUT NUCLEOTIDE                                  
DBREF  3RMP A    1    80  UNP    Q9Z3B4   Q9Z3B4_YERPE     1     80             
DBREF  3RMP C    1    80  UNP    Q9Z3B4   Q9Z3B4_YERPE     1     80             
DBREF  3RMP F    1    15  PDB    3RMP     3RMP             1     15             
DBREF  3RMP H    1    15  PDB    3RMP     3RMP             1     15             
DBREF  3RMP E    1    15  PDB    3RMP     3RMP             1     15             
DBREF  3RMP G    1    15  PDB    3RMP     3RMP             1     15             
SEQADV 3RMP LEU A   81  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP GLU A   82  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS A   83  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS A   84  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS A   85  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS A   86  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS A   87  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS A   88  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP LEU C   81  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP GLU C   82  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS C   83  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS C   84  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS C   85  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS C   86  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS C   87  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQADV 3RMP HIS C   88  UNP  Q9Z3B4              EXPRESSION TAG                 
SEQRES   1 A   88  MET SER LEU THR ASP ALA LYS ILE ARG THR LEU LYS PRO          
SEQRES   2 A   88  SER ASP LYS PRO PHE LYS VAL SER ASP SER HIS GLY LEU          
SEQRES   3 A   88  TYR LEU LEU VAL LYS PRO GLY GLY SER ARG HIS TRP TYR          
SEQRES   4 A   88  LEU LYS TYR ARG ILE SER GLY LYS GLU SER ARG ILE ALA          
SEQRES   5 A   88  LEU GLY ALA TYR PRO ALA ILE SER LEU SER ASP ALA ARG          
SEQRES   6 A   88  GLN GLN ARG GLU GLY ILE ARG LYS MET LEU ALA LEU ASN          
SEQRES   7 A   88  ILE ASN LEU GLU HIS HIS HIS HIS HIS HIS                      
SEQRES   1 C   88  MET SER LEU THR ASP ALA LYS ILE ARG THR LEU LYS PRO          
SEQRES   2 C   88  SER ASP LYS PRO PHE LYS VAL SER ASP SER HIS GLY LEU          
SEQRES   3 C   88  TYR LEU LEU VAL LYS PRO GLY GLY SER ARG HIS TRP TYR          
SEQRES   4 C   88  LEU LYS TYR ARG ILE SER GLY LYS GLU SER ARG ILE ALA          
SEQRES   5 C   88  LEU GLY ALA TYR PRO ALA ILE SER LEU SER ASP ALA ARG          
SEQRES   6 C   88  GLN GLN ARG GLU GLY ILE ARG LYS MET LEU ALA LEU ASN          
SEQRES   7 C   88  ILE ASN LEU GLU HIS HIS HIS HIS HIS HIS                      
SEQRES   1 E   15   DT  DA  DA  DT  DG  DA  DC  DC  DA  DC  DC  DA  DA          
SEQRES   2 E   15   DT  DA                                                      
SEQRES   1 F   15   DT  DA  DT  DT  DG  DG  DT  DG  DG  DT  DC  DA  DT          
SEQRES   2 F   15   DT  DA                                                      
SEQRES   1 G   15   DT  DA  DA  DT  DG  DA  DC  DC  DA  DC  DC  DA  DA          
SEQRES   2 G   15   DT  DA                                                      
SEQRES   1 H   15   DT  DA  DT  DT  DG  DG  DT  DG  DG  DT  DC  DA  DT          
SEQRES   2 H   15   DT  DA                                                      
FORMUL   7  HOH   *45(H2 O)                                                     
HELIX    1   1 THR A    4  THR A   10  1                                   7    
HELIX    2   2 SER A   60  ALA A   76  1                                  17    
HELIX    3   3 THR C    4  THR C   10  1                                   7    
HELIX    4   4 SER C   60  ALA C   76  1                                  17    
SHEET    1   A 4 PHE A  18  SER A  21  0                                        
SHEET    2   A 4 LEU A  26  VAL A  30 -1  O  VAL A  30   N  PHE A  18           
SHEET    3   A 4 ARG A  36  ILE A  44 -1  O  HIS A  37   N  LEU A  29           
SHEET    4   A 4 LYS A  47  ALA A  55 -1  O  LEU A  53   N  TRP A  38           
SHEET    1   B 4 PHE C  18  SER C  21  0                                        
SHEET    2   B 4 LEU C  26  VAL C  30 -1  O  LEU C  28   N  VAL C  20           
SHEET    3   B 4 ARG C  36  ILE C  44 -1  O  HIS C  37   N  LEU C  29           
SHEET    4   B 4 LYS C  47  ALA C  55 -1  O  SER C  49   N  TYR C  42           
CISPEP   1 TYR A   56    PRO A   57          0         7.79                     
CISPEP   2 LEU A   77    ASN A   78          0         0.38                     
CISPEP   3 TYR C   56    PRO C   57          0         6.12                     
CISPEP   4 LEU C   77    ASN C   78          0        -4.51                     
CRYST1   60.900   69.490   83.740  90.00  90.00  90.00 P 21 21 21    8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.016420  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.014391  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.011942        0.00000