PDB Short entry for 3RZX HEADER PROTEIN TRANSPORT 12-MAY-11 3RZX TITLE MOUSE IMPORTIN ALPHA-KU70 NLS PEPTIDE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMPORTIN SUBUNIT ALPHA-2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NLS BINDING DOMAIN; COMPND 5 SYNONYM: IMPORTIN ALPHA P1, KARYOPHERIN SUBUNIT ALPHA-2, PENDULIN, COMPND 6 PORE TARGETING COMPLEX 58 KDA SUBUNIT, PTAC58, RAG COHORT PROTEIN 1, COMPND 7 SRP1-ALPHA; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: KU70 NLS PEPTIDE; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: NUCLEAR LOCALIZATION SIGNAL; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KPNA2, RCH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS ARMADILLO REPEATS, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR A.A.S.TAKEDA,M.R.M.FONTES REVDAT 3 13-SEP-23 3RZX 1 SEQADV REVDAT 2 23-MAY-12 3RZX 1 JRNL REVDAT 1 03-AUG-11 3RZX 0 JRNL AUTH A.A.TAKEDA,A.C.DE BARROS,C.W.CHANG,B.KOBE,M.R.FONTES JRNL TITL STRUCTURAL BASIS OF IMPORTIN-ALPHA-MEDIATED NUCLEAR JRNL TITL 2 TRANSPORT FOR KU70 AND KU80. JRNL REF J.MOL.BIOL. V. 412 226 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21806995 JRNL DOI 10.1016/J.JMB.2011.07.038 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 20974 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1129 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.61 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1474 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.3980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3277 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 96 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.300 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.238 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.157 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.332 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3336 ; 0.025 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4554 ; 2.306 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 437 ; 8.325 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;42.346 ;25.760 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 549 ;20.508 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;21.285 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 554 ; 0.179 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2467 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1728 ; 0.283 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2405 ; 0.346 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 158 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.231 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.071 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2210 ; 2.643 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3523 ; 4.272 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1235 ; 6.922 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1031 ; 9.935 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3RZX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065585. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.45859 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : SAGITALLY FOCUSED SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20974 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 29.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1PJN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE, DTT, PH 6.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.25900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.07100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.99800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.07100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.25900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.99800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 20 REMARK 465 HIS A 21 REMARK 465 HIS A 22 REMARK 465 HIS A 23 REMARK 465 HIS A 24 REMARK 465 HIS A 25 REMARK 465 HIS A 26 REMARK 465 SER A 27 REMARK 465 SER A 28 REMARK 465 GLY A 29 REMARK 465 LEU A 30 REMARK 465 VAL A 31 REMARK 465 PRO A 32 REMARK 465 ARG A 33 REMARK 465 GLY A 34 REMARK 465 SER A 35 REMARK 465 GLY A 36 REMARK 465 MET A 37 REMARK 465 LYS A 38 REMARK 465 GLU A 39 REMARK 465 THR A 40 REMARK 465 ALA A 41 REMARK 465 ALA A 42 REMARK 465 ALA A 43 REMARK 465 LYS A 44 REMARK 465 PHE A 45 REMARK 465 GLU A 46 REMARK 465 ARG A 47 REMARK 465 GLN A 48 REMARK 465 HIS A 49 REMARK 465 MET A 50 REMARK 465 ASP A 51 REMARK 465 SER A 52 REMARK 465 PRO A 53 REMARK 465 ASP A 54 REMARK 465 LEU A 55 REMARK 465 GLY A 56 REMARK 465 THR A 57 REMARK 465 ASP A 58 REMARK 465 ASP A 59 REMARK 465 ASP A 60 REMARK 465 ASP A 61 REMARK 465 LYS A 62 REMARK 465 ALA A 63 REMARK 465 MET A 64 REMARK 465 ALA A 65 REMARK 465 ASP A 66 REMARK 465 ILE A 67 REMARK 465 GLY A 68 REMARK 465 SER A 69 REMARK 465 ASN A 70 REMARK 465 VAL A 498 REMARK 465 GLU A 499 REMARK 465 GLU A 500 REMARK 465 GLU A 501 REMARK 465 GLU A 502 REMARK 465 ASP A 503 REMARK 465 GLN A 504 REMARK 465 ASN A 505 REMARK 465 VAL A 506 REMARK 465 VAL A 507 REMARK 465 PRO A 508 REMARK 465 GLU A 509 REMARK 465 THR A 510 REMARK 465 THR A 511 REMARK 465 SER A 512 REMARK 465 GLU A 513 REMARK 465 GLY A 514 REMARK 465 PHE A 515 REMARK 465 ALA A 516 REMARK 465 PHE A 517 REMARK 465 GLN A 518 REMARK 465 VAL A 519 REMARK 465 GLN A 520 REMARK 465 ASP A 521 REMARK 465 GLY A 522 REMARK 465 ALA A 523 REMARK 465 PRO A 524 REMARK 465 GLY A 525 REMARK 465 THR A 526 REMARK 465 PHE A 527 REMARK 465 ASN A 528 REMARK 465 PHE A 529 REMARK 465 GLU B 537 REMARK 465 GLY B 538 REMARK 465 LYS B 539 REMARK 465 VAL B 540 REMARK 465 THR B 541 REMARK 465 LYS B 542 REMARK 465 ARG B 543 REMARK 465 LYS B 544 REMARK 465 HIS B 545 REMARK 465 ASP B 546 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 75 CG OD1 ND2 REMARK 470 GLU A 107 CB CG CD OE1 OE2 REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 GLN A 109 CG CD OE1 NE2 REMARK 470 LYS A 291 CG CD CE NZ REMARK 470 LYS A 432 CG CD CE NZ REMARK 470 LYS A 453 CG CD CE NZ REMARK 470 GLU A 458 CG CD OE1 OE2 REMARK 470 LYS A 459 CD CE NZ REMARK 470 GLU A 465 CG CD OE1 OE2 REMARK 470 GLU A 474 CG CD OE1 OE2 REMARK 470 ARG A 478 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 482 CG CD OE1 OE2 REMARK 470 LYS A 486 CG CD CE NZ REMARK 470 SER A 497 OG REMARK 470 ASN B 547 CG OD1 ND2 REMARK 470 GLU B 558 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N PRO A 308 CB ASN B 547 2.10 REMARK 500 CA PRO A 308 CB ASN B 547 2.11 REMARK 500 CA GLY B 549 O HOH B 71 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 79 CG GLU A 79 CD 0.094 REMARK 500 CYS A 223 CB CYS A 223 SG -0.136 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 101 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 258 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 285 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 LEU A 441 CA - CB - CG ANGL. DEV. = -15.3 DEGREES REMARK 500 GLU A 456 N - CA - CB ANGL. DEV. = -17.9 DEGREES REMARK 500 ASN A 481 CB - CA - C ANGL. DEV. = 13.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 88 56.26 -102.32 REMARK 500 GLN A 109 65.03 63.64 REMARK 500 ASN A 239 173.73 82.33 REMARK 500 LYS A 240 -18.66 -145.72 REMARK 500 LYS A 388 107.59 -160.36 REMARK 500 SER A 430 44.28 -104.18 REMARK 500 ASN A 481 145.76 -172.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 108 GLN A 109 149.79 REMARK 500 PHE A 496 SER A 497 141.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY A 455 10.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q1S RELATED DB: PDB REMARK 900 MOUSE IMPORTIN ALPHA- PHOSPHORYLATED SV40 CN PEPTIDE COMPLEX REMARK 900 RELATED ID: 1Q1T RELATED DB: PDB REMARK 900 MOUSE IMPORTIN ALPHA: NON-PHOSPHORYLATED SV40 CN PEPTIDE COMPLEX REMARK 900 RELATED ID: 1EJY RELATED DB: PDB REMARK 900 MOUSE IMPORTIN ALPHA-NUCLEOPLASMIN NLS PEPTIDE COMPLEX REMARK 900 RELATED ID: 3L3Q RELATED DB: PDB REMARK 900 MOUSE IMPORTIN ALPHA-PEPTM NLS PEPTIDE COMPLEX REMARK 900 RELATED ID: 1PJM RELATED DB: PDB REMARK 900 MOUSE IMPORTIN ALPHA-BIPARTITE NLS FROM HUMAN RETINOBLASTOMA REMARK 900 PROTEIN COMPLEX REMARK 900 RELATED ID: 1PJN RELATED DB: PDB REMARK 900 MOUSE IMPORTIN ALPHA-BIPARTITE NLS N1N2 FROM XENOPUS LAEVIS REMARK 900 PHOSPHOPROTEIN COMPLEX DBREF 3RZX A 70 529 UNP P52293 IMA2_MOUSE 70 529 DBREF 3RZX B 537 558 UNP P12956 XRCC6_HUMAN 537 558 SEQADV 3RZX MET A 20 UNP P52293 EXPRESSION TAG SEQADV 3RZX HIS A 21 UNP P52293 EXPRESSION TAG SEQADV 3RZX HIS A 22 UNP P52293 EXPRESSION TAG SEQADV 3RZX HIS A 23 UNP P52293 EXPRESSION TAG SEQADV 3RZX HIS A 24 UNP P52293 EXPRESSION TAG SEQADV 3RZX HIS A 25 UNP P52293 EXPRESSION TAG SEQADV 3RZX HIS A 26 UNP P52293 EXPRESSION TAG SEQADV 3RZX SER A 27 UNP P52293 EXPRESSION TAG SEQADV 3RZX SER A 28 UNP P52293 EXPRESSION TAG SEQADV 3RZX GLY A 29 UNP P52293 EXPRESSION TAG SEQADV 3RZX LEU A 30 UNP P52293 EXPRESSION TAG SEQADV 3RZX VAL A 31 UNP P52293 EXPRESSION TAG SEQADV 3RZX PRO A 32 UNP P52293 EXPRESSION TAG SEQADV 3RZX ARG A 33 UNP P52293 EXPRESSION TAG SEQADV 3RZX GLY A 34 UNP P52293 EXPRESSION TAG SEQADV 3RZX SER A 35 UNP P52293 EXPRESSION TAG SEQADV 3RZX GLY A 36 UNP P52293 EXPRESSION TAG SEQADV 3RZX MET A 37 UNP P52293 EXPRESSION TAG SEQADV 3RZX LYS A 38 UNP P52293 EXPRESSION TAG SEQADV 3RZX GLU A 39 UNP P52293 EXPRESSION TAG SEQADV 3RZX THR A 40 UNP P52293 EXPRESSION TAG SEQADV 3RZX ALA A 41 UNP P52293 EXPRESSION TAG SEQADV 3RZX ALA A 42 UNP P52293 EXPRESSION TAG SEQADV 3RZX ALA A 43 UNP P52293 EXPRESSION TAG SEQADV 3RZX LYS A 44 UNP P52293 EXPRESSION TAG SEQADV 3RZX PHE A 45 UNP P52293 EXPRESSION TAG SEQADV 3RZX GLU A 46 UNP P52293 EXPRESSION TAG SEQADV 3RZX ARG A 47 UNP P52293 EXPRESSION TAG SEQADV 3RZX GLN A 48 UNP P52293 EXPRESSION TAG SEQADV 3RZX HIS A 49 UNP P52293 EXPRESSION TAG SEQADV 3RZX MET A 50 UNP P52293 EXPRESSION TAG SEQADV 3RZX ASP A 51 UNP P52293 EXPRESSION TAG SEQADV 3RZX SER A 52 UNP P52293 EXPRESSION TAG SEQADV 3RZX PRO A 53 UNP P52293 EXPRESSION TAG SEQADV 3RZX ASP A 54 UNP P52293 EXPRESSION TAG SEQADV 3RZX LEU A 55 UNP P52293 EXPRESSION TAG SEQADV 3RZX GLY A 56 UNP P52293 EXPRESSION TAG SEQADV 3RZX THR A 57 UNP P52293 EXPRESSION TAG SEQADV 3RZX ASP A 58 UNP P52293 EXPRESSION TAG SEQADV 3RZX ASP A 59 UNP P52293 EXPRESSION TAG SEQADV 3RZX ASP A 60 UNP P52293 EXPRESSION TAG SEQADV 3RZX ASP A 61 UNP P52293 EXPRESSION TAG SEQADV 3RZX LYS A 62 UNP P52293 EXPRESSION TAG SEQADV 3RZX ALA A 63 UNP P52293 EXPRESSION TAG SEQADV 3RZX MET A 64 UNP P52293 EXPRESSION TAG SEQADV 3RZX ALA A 65 UNP P52293 EXPRESSION TAG SEQADV 3RZX ASP A 66 UNP P52293 EXPRESSION TAG SEQADV 3RZX ILE A 67 UNP P52293 EXPRESSION TAG SEQADV 3RZX GLY A 68 UNP P52293 EXPRESSION TAG SEQADV 3RZX SER A 69 UNP P52293 EXPRESSION TAG SEQRES 1 A 510 MET HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO SEQRES 2 A 510 ARG GLY SER GLY MET LYS GLU THR ALA ALA ALA LYS PHE SEQRES 3 A 510 GLU ARG GLN HIS MET ASP SER PRO ASP LEU GLY THR ASP SEQRES 4 A 510 ASP ASP ASP LYS ALA MET ALA ASP ILE GLY SER ASN GLN SEQRES 5 A 510 GLY THR VAL ASN TRP SER VAL GLU ASP ILE VAL LYS GLY SEQRES 6 A 510 ILE ASN SER ASN ASN LEU GLU SER GLN LEU GLN ALA THR SEQRES 7 A 510 GLN ALA ALA ARG LYS LEU LEU SER ARG GLU LYS GLN PRO SEQRES 8 A 510 PRO ILE ASP ASN ILE ILE ARG ALA GLY LEU ILE PRO LYS SEQRES 9 A 510 PHE VAL SER PHE LEU GLY LYS THR ASP CYS SER PRO ILE SEQRES 10 A 510 GLN PHE GLU SER ALA TRP ALA LEU THR ASN ILE ALA SER SEQRES 11 A 510 GLY THR SER GLU GLN THR LYS ALA VAL VAL ASP GLY GLY SEQRES 12 A 510 ALA ILE PRO ALA PHE ILE SER LEU LEU ALA SER PRO HIS SEQRES 13 A 510 ALA HIS ILE SER GLU GLN ALA VAL TRP ALA LEU GLY ASN SEQRES 14 A 510 ILE ALA GLY ASP GLY SER ALA PHE ARG ASP LEU VAL ILE SEQRES 15 A 510 LYS HIS GLY ALA ILE ASP PRO LEU LEU ALA LEU LEU ALA SEQRES 16 A 510 VAL PRO ASP LEU SER THR LEU ALA CYS GLY TYR LEU ARG SEQRES 17 A 510 ASN LEU THR TRP THR LEU SER ASN LEU CYS ARG ASN LYS SEQRES 18 A 510 ASN PRO ALA PRO PRO LEU ASP ALA VAL GLU GLN ILE LEU SEQRES 19 A 510 PRO THR LEU VAL ARG LEU LEU HIS HIS ASN ASP PRO GLU SEQRES 20 A 510 VAL LEU ALA ASP SER CYS TRP ALA ILE SER TYR LEU THR SEQRES 21 A 510 ASP GLY PRO ASN GLU ARG ILE GLU MET VAL VAL LYS LYS SEQRES 22 A 510 GLY VAL VAL PRO GLN LEU VAL LYS LEU LEU GLY ALA THR SEQRES 23 A 510 GLU LEU PRO ILE VAL THR PRO ALA LEU ARG ALA ILE GLY SEQRES 24 A 510 ASN ILE VAL THR GLY THR ASP GLU GLN THR GLN LYS VAL SEQRES 25 A 510 ILE ASP ALA GLY ALA LEU ALA VAL PHE PRO SER LEU LEU SEQRES 26 A 510 THR ASN PRO LYS THR ASN ILE GLN LYS GLU ALA THR TRP SEQRES 27 A 510 THR MET SER ASN ILE THR ALA GLY ARG GLN ASP GLN ILE SEQRES 28 A 510 GLN GLN VAL VAL ASN HIS GLY LEU VAL PRO PHE LEU VAL SEQRES 29 A 510 GLY VAL LEU SER LYS ALA ASP PHE LYS THR GLN LYS GLU SEQRES 30 A 510 ALA ALA TRP ALA ILE THR ASN TYR THR SER GLY GLY THR SEQRES 31 A 510 VAL GLU GLN ILE VAL TYR LEU VAL HIS CYS GLY ILE ILE SEQRES 32 A 510 GLU PRO LEU MET ASN LEU LEU SER ALA LYS ASP THR LYS SEQRES 33 A 510 ILE ILE GLN VAL ILE LEU ASP ALA ILE SER ASN ILE PHE SEQRES 34 A 510 GLN ALA ALA GLU LYS LEU GLY GLU THR GLU LYS LEU SER SEQRES 35 A 510 ILE MET ILE GLU GLU CYS GLY GLY LEU ASP LYS ILE GLU SEQRES 36 A 510 ALA LEU GLN ARG HIS GLU ASN GLU SER VAL TYR LYS ALA SEQRES 37 A 510 SER LEU ASN LEU ILE GLU LYS TYR PHE SER VAL GLU GLU SEQRES 38 A 510 GLU GLU ASP GLN ASN VAL VAL PRO GLU THR THR SER GLU SEQRES 39 A 510 GLY PHE ALA PHE GLN VAL GLN ASP GLY ALA PRO GLY THR SEQRES 40 A 510 PHE ASN PHE SEQRES 1 B 22 GLU GLY LYS VAL THR LYS ARG LYS HIS ASP ASN GLU GLY SEQRES 2 B 22 SER GLY SER LYS ARG PRO LYS VAL GLU FORMUL 3 HOH *96(H2 O) HELIX 1 1 SER A 77 ASN A 86 1 10 HELIX 2 2 ASN A 89 SER A 105 1 17 HELIX 3 3 PRO A 111 ALA A 118 1 8 HELIX 4 4 GLY A 119 LEU A 128 1 10 HELIX 5 5 GLY A 129 ASP A 132 5 4 HELIX 6 6 CYS A 133 SER A 149 1 17 HELIX 7 7 THR A 151 GLY A 161 1 11 HELIX 8 8 GLY A 162 LEU A 171 1 10 HELIX 9 9 HIS A 175 ASP A 192 1 18 HELIX 10 10 GLY A 193 HIS A 203 1 11 HELIX 11 11 ALA A 205 LEU A 212 1 8 HELIX 12 12 ASP A 217 LEU A 221 5 5 HELIX 13 13 ALA A 222 CYS A 237 1 16 HELIX 14 14 PRO A 245 LEU A 260 1 16 HELIX 15 15 ASP A 264 THR A 279 1 16 HELIX 16 16 PRO A 282 LYS A 291 1 10 HELIX 17 17 VAL A 294 ALA A 304 1 11 HELIX 18 18 GLU A 306 THR A 322 1 17 HELIX 19 19 THR A 324 GLY A 335 1 12 HELIX 20 20 ALA A 336 ALA A 338 5 3 HELIX 21 21 VAL A 339 THR A 345 1 7 HELIX 22 22 LYS A 348 THR A 363 1 16 HELIX 23 23 ARG A 366 HIS A 376 1 11 HELIX 24 24 LEU A 378 LYS A 388 1 11 HELIX 25 25 ASP A 390 GLY A 408 1 19 HELIX 26 26 THR A 409 CYS A 419 1 11 HELIX 27 27 ILE A 421 LEU A 428 1 8 HELIX 28 28 LEU A 429 ALA A 431 5 3 HELIX 29 29 ASP A 433 LYS A 453 1 21 HELIX 30 30 GLU A 456 CYS A 467 1 12 HELIX 31 31 GLY A 468 ARG A 478 1 11 HELIX 32 32 ASN A 481 PHE A 496 1 16 CISPEP 1 ASN A 241 PRO A 242 0 12.16 CRYST1 78.518 89.996 100.142 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012736 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011112 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009986 0.00000