PDB Short entry for 3SPY HEADER TRANSFERASE/DNA 04-JUL-11 3SPY TITLE RB69 DNA POLYMERASE(L415A/L561A/S565G/Y567A) TERNARY COMPLEX WITH TITLE 2 DUPCPP OPPOSITE DA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GP43; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*TP*CP*GP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G) COMPND 10 -3'; COMPND 11 CHAIN: T; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: TEMPLATE; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3'; COMPND 16 CHAIN: P; COMPND 17 ENGINEERED: YES; COMPND 18 OTHER_DETAILS: PRIMER SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE RB69; SOURCE 3 ORGANISM_TAXID: 12353; SOURCE 4 GENE: 43; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES KEYWDS DUPCPP, QUADRUPLE MUTANT, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.XIA,W.H.KONIGSBERG,J.WANG REVDAT 3 28-FEB-24 3SPY 1 REMARK SEQADV LINK REVDAT 2 02-NOV-11 3SPY 1 JRNL REVDAT 1 12-OCT-11 3SPY 0 JRNL AUTH S.XIA,M.WANG,G.BLAHA,W.H.KONIGSBERG,J.WANG JRNL TITL STRUCTURAL INSIGHTS INTO COMPLETE METAL ION COORDINATION JRNL TITL 2 FROM TERNARY COMPLEXES OF B FAMILY RB69 DNA POLYMERASE. JRNL REF BIOCHEMISTRY V. 50 9114 2011 JRNL REFN ISSN 0006-2960 JRNL PMID 21923197 JRNL DOI 10.1021/BI201260H REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 88.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 61948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3323 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.14 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4134 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 231 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7340 REMARK 3 NUCLEIC ACID ATOMS : 631 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 494 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14000 REMARK 3 B22 (A**2) : 1.08000 REMARK 3 B33 (A**2) : -1.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.232 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.197 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.141 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.168 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8295 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11352 ; 1.147 ; 2.061 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 910 ; 5.224 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 377 ;34.699 ;24.111 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1351 ;14.565 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;15.545 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1201 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6135 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4510 ; 1.467 ; 4.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7313 ; 2.417 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3785 ; 2.972 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4034 ; 4.180 ; 9.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : T 1 T 18 REMARK 3 RESIDUE RANGE : P 103 P 115 REMARK 3 RESIDUE RANGE : A 902 A 902 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3150 2.8550 29.7170 REMARK 3 T TENSOR REMARK 3 T11: 0.1008 T22: 0.1239 REMARK 3 T33: 0.1755 T12: 0.0148 REMARK 3 T13: 0.0045 T23: -0.0247 REMARK 3 L TENSOR REMARK 3 L11: 1.7613 L22: 0.1679 REMARK 3 L33: 0.1636 L12: -0.3297 REMARK 3 L13: 0.5088 L23: -0.1307 REMARK 3 S TENSOR REMARK 3 S11: -0.0909 S12: 0.0748 S13: -0.0229 REMARK 3 S21: -0.0168 S22: 0.0396 S23: -0.1151 REMARK 3 S31: -0.0264 S32: 0.0178 S33: 0.0513 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 105 REMARK 3 RESIDUE RANGE : A 340 A 389 REMARK 3 ORIGIN FOR THE GROUP (A): -24.8980 -2.3010 31.6540 REMARK 3 T TENSOR REMARK 3 T11: 0.0754 T22: 0.0596 REMARK 3 T33: 0.1319 T12: -0.0069 REMARK 3 T13: 0.0036 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.1010 L22: 0.9021 REMARK 3 L33: 0.4329 L12: -0.0776 REMARK 3 L13: 0.1486 L23: 0.1485 REMARK 3 S TENSOR REMARK 3 S11: 0.0231 S12: 0.0119 S13: -0.0477 REMARK 3 S21: 0.0389 S22: -0.0196 S23: 0.1100 REMARK 3 S31: 0.0299 S32: -0.0627 S33: -0.0035 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 106 A 339 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3340 21.9170 50.2450 REMARK 3 T TENSOR REMARK 3 T11: 0.0966 T22: 0.0383 REMARK 3 T33: 0.0545 T12: 0.0040 REMARK 3 T13: 0.0169 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.3307 L22: 0.7197 REMARK 3 L33: 1.1418 L12: 0.1577 REMARK 3 L13: 0.0270 L23: -0.0910 REMARK 3 S TENSOR REMARK 3 S11: 0.0103 S12: -0.0411 S13: -0.0337 REMARK 3 S21: 0.1527 S22: -0.0256 S23: 0.0303 REMARK 3 S31: -0.0721 S32: 0.0731 S33: 0.0153 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 390 A 468 REMARK 3 RESIDUE RANGE : A 576 A 706 REMARK 3 ORIGIN FOR THE GROUP (A): 3.4490 6.5790 5.0160 REMARK 3 T TENSOR REMARK 3 T11: 0.1034 T22: 0.1604 REMARK 3 T33: 0.0166 T12: 0.0033 REMARK 3 T13: 0.0088 T23: -0.0378 REMARK 3 L TENSOR REMARK 3 L11: 0.7110 L22: 1.0791 REMARK 3 L33: 0.4794 L12: 0.4068 REMARK 3 L13: 0.1493 L23: -0.0692 REMARK 3 S TENSOR REMARK 3 S11: -0.0275 S12: 0.3196 S13: -0.0688 REMARK 3 S21: -0.1692 S22: 0.0983 S23: -0.0294 REMARK 3 S31: 0.0261 S32: 0.1287 S33: -0.0709 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 469 A 575 REMARK 3 ORIGIN FOR THE GROUP (A): -9.5870 26.2240 18.0570 REMARK 3 T TENSOR REMARK 3 T11: 0.1060 T22: 0.0872 REMARK 3 T33: 0.0822 T12: 0.0054 REMARK 3 T13: -0.0214 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 0.3787 L22: 2.4918 REMARK 3 L33: 0.4948 L12: 0.1515 REMARK 3 L13: 0.1673 L23: -0.3305 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: 0.1048 S13: 0.0977 REMARK 3 S21: 0.0469 S22: -0.0221 S23: 0.0841 REMARK 3 S31: -0.1348 S32: -0.0475 S33: 0.0813 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 707 A 737 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4830 22.8830 17.4260 REMARK 3 T TENSOR REMARK 3 T11: 0.1048 T22: 0.1005 REMARK 3 T33: 0.0751 T12: -0.0230 REMARK 3 T13: -0.0031 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.1534 L22: 0.3248 REMARK 3 L33: 0.8580 L12: -0.2307 REMARK 3 L13: 0.4586 L23: -0.1853 REMARK 3 S TENSOR REMARK 3 S11: 0.0077 S12: 0.0664 S13: -0.0198 REMARK 3 S21: 0.0345 S22: 0.0716 S23: -0.0410 REMARK 3 S31: -0.1466 S32: -0.0719 S33: -0.0794 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 738 A 901 REMARK 3 ORIGIN FOR THE GROUP (A): 22.3820 20.8620 37.3990 REMARK 3 T TENSOR REMARK 3 T11: 0.0274 T22: 0.0541 REMARK 3 T33: 0.0768 T12: 0.0273 REMARK 3 T13: -0.0315 T23: -0.0558 REMARK 3 L TENSOR REMARK 3 L11: 1.3585 L22: 0.6448 REMARK 3 L33: 2.1505 L12: 0.0162 REMARK 3 L13: -0.2735 L23: -0.3012 REMARK 3 S TENSOR REMARK 3 S11: -0.0200 S12: -0.1576 S13: 0.1379 REMARK 3 S21: 0.0813 S22: 0.0690 S23: -0.1187 REMARK 3 S31: -0.0290 S32: 0.1461 S33: -0.0490 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3SPY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066507. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : APEX II CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61948 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 88.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150 MM CALCIUM CHLORIDE, 15% W/V REMARK 280 PEG350 MME, 100 MM SODIUM CACODYLATE, PH 6.5, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.66800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.40600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.29900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.40600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.66800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.29900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG T 3 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 DT T 6 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DA T 8 O4' - C1' - N9 ANGL. DEV. = 5.2 DEGREES REMARK 500 DC T 15 O4' - C1' - N1 ANGL. DEV. = 3.1 DEGREES REMARK 500 DG P 105 C3' - O3' - P ANGL. DEV. = 10.3 DEGREES REMARK 500 DC P 108 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DT P 109 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT P 112 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC P 115 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 221 -68.53 -124.79 REMARK 500 ASN A 316 68.93 -153.96 REMARK 500 SER A 414 67.31 33.26 REMARK 500 ASN A 424 47.42 71.70 REMARK 500 ASP A 579 113.99 -163.69 REMARK 500 THR A 622 -63.53 70.19 REMARK 500 ASP A 623 22.27 -149.95 REMARK 500 GLU A 686 -74.21 -100.71 REMARK 500 GLU A 716 60.69 25.14 REMARK 500 GLU A 828 -169.36 -102.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 907 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 114 OD2 REMARK 620 2 GLU A 116 OE2 79.7 REMARK 620 3 HOH A1222 O 149.4 76.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 903 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 411 OD1 REMARK 620 2 LEU A 412 O 89.1 REMARK 620 3 ASP A 623 OD1 94.9 87.5 REMARK 620 4 UPC A 902 O2B 174.3 93.6 90.2 REMARK 620 5 UPC A 902 O1G 85.6 96.2 176.3 89.1 REMARK 620 6 UPC A 902 O2A 94.2 174.8 88.2 83.4 88.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 904 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 411 OD2 REMARK 620 2 ASP A 623 OD2 92.3 REMARK 620 3 UPC A 902 O2A 93.6 97.1 REMARK 620 4 HOH A1267 O 88.6 175.3 78.3 REMARK 620 5 DC P 115 O3' 159.4 90.5 106.3 90.3 REMARK 620 6 HOH P 493 O 81.5 110.8 151.8 73.9 78.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 905 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 505 O REMARK 620 2 LYS A 531 O 109.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 906 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 936 O REMARK 620 2 HOH A 973 O 86.4 REMARK 620 3 HOH A1014 O 88.7 82.1 REMARK 620 4 HOH A1180 O 79.8 166.2 98.8 REMARK 620 5 HOH A1228 O 73.9 91.5 161.8 83.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UPC A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 907 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SPZ RELATED DB: PDB REMARK 900 RB69 DNA POLYMERASE(L415A/L561A/S565G/Y567A) TERNARY COMPLEX WITH REMARK 900 DUPCPP OPPOSITE DA (CA2+) REMARK 900 RELATED ID: 3SQ0 RELATED DB: PDB REMARK 900 RB69 DNA POLYMERASE(L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP REMARK 900 OPPOSITE DA (MN2+) REMARK 900 RELATED ID: 3SQ1 RELATED DB: PDB REMARK 900 RB69 DNA POLYMERASE TERNARY COMPLEX WITH DUPCPP OPPOSITE DA REMARK 900 RELATED ID: 3SQ2 RELATED DB: PDB REMARK 900 RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (AT RICH REMARK 900 SEQUENCE) REMARK 900 RELATED ID: 3SQ4 RELATED DB: PDB REMARK 900 RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (GC RICH REMARK 900 SEQUENCE) DBREF 3SPY A 1 901 UNP Q38087 DPOL_BPR69 1 901 DBREF 3SPY T 1 18 PDB 3SPY 3SPY 1 18 DBREF 3SPY P 103 115 PDB 3SPY 3SPY 103 115 SEQADV 3SPY ALA A 222 UNP Q38087 ASP 222 ENGINEERED MUTATION SEQADV 3SPY ALA A 327 UNP Q38087 ASP 327 ENGINEERED MUTATION SEQADV 3SPY ALA A 415 UNP Q38087 LEU 415 ENGINEERED MUTATION SEQADV 3SPY ALA A 561 UNP Q38087 LEU 561 ENGINEERED MUTATION SEQADV 3SPY GLY A 565 UNP Q38087 SER 565 ENGINEERED MUTATION SEQADV 3SPY ALA A 567 UNP Q38087 TYR 567 ENGINEERED MUTATION SEQRES 1 A 901 MET LYS GLU PHE TYR LEU THR VAL GLU GLN ILE GLY ASP SEQRES 2 A 901 SER ILE PHE GLU ARG TYR ILE ASP SER ASN GLY ARG GLU SEQRES 3 A 901 ARG THR ARG GLU VAL GLU TYR LYS PRO SER LEU PHE ALA SEQRES 4 A 901 HIS CYS PRO GLU SER GLN ALA THR LYS TYR PHE ASP ILE SEQRES 5 A 901 TYR GLY LYS PRO CYS THR ARG LYS LEU PHE ALA ASN MET SEQRES 6 A 901 ARG ASP ALA SER GLN TRP ILE LYS ARG MET GLU ASP ILE SEQRES 7 A 901 GLY LEU GLU ALA LEU GLY MET ASP ASP PHE LYS LEU ALA SEQRES 8 A 901 TYR LEU SER ASP THR TYR ASN TYR GLU ILE LYS TYR ASP SEQRES 9 A 901 HIS THR LYS ILE ARG VAL ALA ASN PHE ASP ILE GLU VAL SEQRES 10 A 901 THR SER PRO ASP GLY PHE PRO GLU PRO SER GLN ALA LYS SEQRES 11 A 901 HIS PRO ILE ASP ALA ILE THR HIS TYR ASP SER ILE ASP SEQRES 12 A 901 ASP ARG PHE TYR VAL PHE ASP LEU LEU ASN SER PRO TYR SEQRES 13 A 901 GLY ASN VAL GLU GLU TRP SER ILE GLU ILE ALA ALA LYS SEQRES 14 A 901 LEU GLN GLU GLN GLY GLY ASP GLU VAL PRO SER GLU ILE SEQRES 15 A 901 ILE ASP LYS ILE ILE TYR MET PRO PHE ASP ASN GLU LYS SEQRES 16 A 901 GLU LEU LEU MET GLU TYR LEU ASN PHE TRP GLN GLN LYS SEQRES 17 A 901 THR PRO VAL ILE LEU THR GLY TRP ASN VAL GLU SER PHE SEQRES 18 A 901 ALA ILE PRO TYR VAL TYR ASN ARG ILE LYS ASN ILE PHE SEQRES 19 A 901 GLY GLU SER THR ALA LYS ARG LEU SER PRO HIS ARG LYS SEQRES 20 A 901 THR ARG VAL LYS VAL ILE GLU ASN MET TYR GLY SER ARG SEQRES 21 A 901 GLU ILE ILE THR LEU PHE GLY ILE SER VAL LEU ASP TYR SEQRES 22 A 901 ILE ASP LEU TYR LYS LYS PHE SER PHE THR ASN GLN PRO SEQRES 23 A 901 SER TYR SER LEU ASP TYR ILE SER GLU PHE GLU LEU ASN SEQRES 24 A 901 VAL GLY LYS LEU LYS TYR ASP GLY PRO ILE SER LYS LEU SEQRES 25 A 901 ARG GLU SER ASN HIS GLN ARG TYR ILE SER TYR ASN ILE SEQRES 26 A 901 ILE ALA VAL TYR ARG VAL LEU GLN ILE ASP ALA LYS ARG SEQRES 27 A 901 GLN PHE ILE ASN LEU SER LEU ASP MET GLY TYR TYR ALA SEQRES 28 A 901 LYS ILE GLN ILE GLN SER VAL PHE SER PRO ILE LYS THR SEQRES 29 A 901 TRP ASP ALA ILE ILE PHE ASN SER LEU LYS GLU GLN ASN SEQRES 30 A 901 LYS VAL ILE PRO GLN GLY ARG SER HIS PRO VAL GLN PRO SEQRES 31 A 901 TYR PRO GLY ALA PHE VAL LYS GLU PRO ILE PRO ASN ARG SEQRES 32 A 901 TYR LYS TYR VAL MET SER PHE ASP LEU THR SER ALA TYR SEQRES 33 A 901 PRO SER ILE ILE ARG GLN VAL ASN ILE SER PRO GLU THR SEQRES 34 A 901 ILE ALA GLY THR PHE LYS VAL ALA PRO LEU HIS ASP TYR SEQRES 35 A 901 ILE ASN ALA VAL ALA GLU ARG PRO SER ASP VAL TYR SER SEQRES 36 A 901 CYS SER PRO ASN GLY MET MET TYR TYR LYS ASP ARG ASP SEQRES 37 A 901 GLY VAL VAL PRO THR GLU ILE THR LYS VAL PHE ASN GLN SEQRES 38 A 901 ARG LYS GLU HIS LYS GLY TYR MET LEU ALA ALA GLN ARG SEQRES 39 A 901 ASN GLY GLU ILE ILE LYS GLU ALA LEU HIS ASN PRO ASN SEQRES 40 A 901 LEU SER VAL ASP GLU PRO LEU ASP VAL ASP TYR ARG PHE SEQRES 41 A 901 ASP PHE SER ASP GLU ILE LYS GLU LYS ILE LYS LYS LEU SEQRES 42 A 901 SER ALA LYS SER LEU ASN GLU MET LEU PHE ARG ALA GLN SEQRES 43 A 901 ARG THR GLU VAL ALA GLY MET THR ALA GLN ILE ASN ARG SEQRES 44 A 901 LYS ALA LEU ILE ASN GLY LEU ALA GLY ALA LEU GLY ASN SEQRES 45 A 901 VAL TRP PHE ARG TYR TYR ASP LEU ARG ASN ALA THR ALA SEQRES 46 A 901 ILE THR THR PHE GLY GLN MET ALA LEU GLN TRP ILE GLU SEQRES 47 A 901 ARG LYS VAL ASN GLU TYR LEU ASN GLU VAL CYS GLY THR SEQRES 48 A 901 GLU GLY GLU ALA PHE VAL LEU TYR GLY ASP THR ASP SER SEQRES 49 A 901 ILE TYR VAL SER ALA ASP LYS ILE ILE ASP LYS VAL GLY SEQRES 50 A 901 GLU SER LYS PHE ARG ASP THR ASN HIS TRP VAL ASP PHE SEQRES 51 A 901 LEU ASP LYS PHE ALA ARG GLU ARG MET GLU PRO ALA ILE SEQRES 52 A 901 ASP ARG GLY PHE ARG GLU MET CYS GLU TYR MET ASN ASN SEQRES 53 A 901 LYS GLN HIS LEU MET PHE MET ASP ARG GLU ALA ILE ALA SEQRES 54 A 901 GLY PRO PRO LEU GLY SER LYS GLY ILE GLY GLY PHE TRP SEQRES 55 A 901 THR GLY LYS LYS ARG TYR ALA LEU ASN VAL TRP ASP MET SEQRES 56 A 901 GLU GLY THR ARG TYR ALA GLU PRO LYS LEU LYS ILE MET SEQRES 57 A 901 GLY LEU GLU THR GLN LYS SER SER THR PRO LYS ALA VAL SEQRES 58 A 901 GLN LYS ALA LEU LYS GLU CYS ILE ARG ARG MET LEU GLN SEQRES 59 A 901 GLU GLY GLU GLU SER LEU GLN GLU TYR PHE LYS GLU PHE SEQRES 60 A 901 GLU LYS GLU PHE ARG GLN LEU ASN TYR ILE SER ILE ALA SEQRES 61 A 901 SER VAL SER SER ALA ASN ASN ILE ALA LYS TYR ASP VAL SEQRES 62 A 901 GLY GLY PHE PRO GLY PRO LYS CYS PRO PHE HIS ILE ARG SEQRES 63 A 901 GLY ILE LEU THR TYR ASN ARG ALA ILE LYS GLY ASN ILE SEQRES 64 A 901 ASP ALA PRO GLN VAL VAL GLU GLY GLU LYS VAL TYR VAL SEQRES 65 A 901 LEU PRO LEU ARG GLU GLY ASN PRO PHE GLY ASP LYS CYS SEQRES 66 A 901 ILE ALA TRP PRO SER GLY THR GLU ILE THR ASP LEU ILE SEQRES 67 A 901 LYS ASP ASP VAL LEU HIS TRP MET ASP TYR THR VAL LEU SEQRES 68 A 901 LEU GLU LYS THR PHE ILE LYS PRO LEU GLU GLY PHE THR SEQRES 69 A 901 SER ALA ALA LYS LEU ASP TYR GLU LYS LYS ALA SER LEU SEQRES 70 A 901 PHE ASP MET PHE SEQRES 1 T 18 DT DC DG DA DG DT DA DA DG DC DA DG DT SEQRES 2 T 18 DC DC DG DC DG SEQRES 1 P 13 DG DC DG DG DA DC DT DG DC DT DT DA DC HET UPC A 902 28 HET MG A 903 1 HET MG A 904 1 HET MG A 905 1 HET MG A 906 1 HET MG A 907 1 HETNAM UPC 2'-DEOXY-5'-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY) HETNAM 2 UPC PHOSPHORYL]METHYL}PHOSPHORYL]URIDINE HETNAM MG MAGNESIUM ION FORMUL 4 UPC C10 H17 N2 O13 P3 FORMUL 5 MG 5(MG 2+) FORMUL 10 HOH *494(H2 O) HELIX 1 1 ASN A 64 GLY A 79 1 16 HELIX 2 2 ASP A 87 TYR A 97 1 11 HELIX 3 3 ASP A 104 ILE A 108 5 5 HELIX 4 4 SER A 163 LYS A 169 1 7 HELIX 5 5 LEU A 170 GLY A 174 5 5 HELIX 6 6 PRO A 179 ASP A 184 1 6 HELIX 7 7 ASN A 193 LYS A 208 1 16 HELIX 8 8 PHE A 221 GLY A 235 1 15 HELIX 9 9 GLY A 235 LYS A 240 1 6 HELIX 10 10 ARG A 241 SER A 243 5 3 HELIX 11 11 ASP A 272 SER A 281 1 10 HELIX 12 12 SER A 289 ASN A 299 1 11 HELIX 13 13 PRO A 308 SER A 310 5 3 HELIX 14 14 LYS A 311 GLN A 339 1 29 HELIX 15 15 GLN A 339 LYS A 352 1 14 HELIX 16 16 GLN A 354 PHE A 359 5 6 HELIX 17 17 SER A 360 GLU A 375 1 16 HELIX 18 18 SER A 414 ASN A 424 1 11 HELIX 19 19 PRO A 438 ASN A 444 1 7 HELIX 20 20 GLY A 469 ASN A 505 1 37 HELIX 21 21 SER A 523 LYS A 531 1 9 HELIX 22 22 SER A 534 LEU A 570 1 37 HELIX 23 23 ASP A 579 GLY A 610 1 32 HELIX 24 24 ALA A 629 GLY A 637 1 9 HELIX 25 25 GLU A 638 PHE A 641 5 4 HELIX 26 26 ASP A 643 ARG A 658 1 16 HELIX 27 27 ARG A 658 MET A 674 1 17 HELIX 28 28 LEU A 730 LYS A 734 5 5 HELIX 29 29 PRO A 738 GLU A 755 1 18 HELIX 30 30 GLY A 756 PHE A 771 1 16 HELIX 31 31 ARG A 772 LEU A 774 5 3 HELIX 32 32 PRO A 802 ILE A 815 1 14 HELIX 33 33 ILE A 858 MET A 866 1 9 HELIX 34 34 ASP A 867 PHE A 876 1 10 HELIX 35 35 PHE A 876 ALA A 887 1 12 HELIX 36 36 SER A 896 PHE A 901 5 6 SHEET 1 A 3 PHE A 4 ILE A 11 0 SHEET 2 A 3 SER A 14 ILE A 20 -1 O ARG A 18 N LEU A 6 SHEET 3 A 3 GLU A 26 VAL A 31 -1 O VAL A 31 N ILE A 15 SHEET 1 B 4 SER A 36 HIS A 40 0 SHEET 2 B 4 PRO A 56 LEU A 61 -1 O LYS A 60 N LEU A 37 SHEET 3 B 4 TYR A 49 ASP A 51 -1 N TYR A 49 O CYS A 57 SHEET 4 B 4 LYS A 378 VAL A 379 1 O VAL A 379 N PHE A 50 SHEET 1 C 6 ILE A 186 PHE A 191 0 SHEET 2 C 6 ARG A 145 LEU A 151 1 N VAL A 148 O MET A 189 SHEET 3 C 6 ILE A 133 ASP A 140 -1 N ILE A 136 O PHE A 149 SHEET 4 C 6 VAL A 110 VAL A 117 -1 N ASN A 112 O TYR A 139 SHEET 5 C 6 ILE A 212 THR A 214 1 O ILE A 212 N ALA A 111 SHEET 6 C 6 SER A 269 VAL A 270 1 O SER A 269 N LEU A 213 SHEET 1 D 2 ASN A 153 SER A 154 0 SHEET 2 D 2 GLY A 157 ASN A 158 -1 O GLY A 157 N SER A 154 SHEET 1 E 2 THR A 248 ASN A 255 0 SHEET 2 E 2 GLY A 258 LEU A 265 -1 O ARG A 260 N ILE A 253 SHEET 1 F 7 ASN A 402 ARG A 403 0 SHEET 2 F 7 GLY A 700 GLY A 704 -1 O TRP A 702 N ASN A 402 SHEET 3 F 7 ARG A 707 MET A 715 -1 O ALA A 709 N PHE A 701 SHEET 4 F 7 MET A 683 ALA A 689 -1 N ILE A 688 O TRP A 713 SHEET 5 F 7 VAL A 407 LEU A 412 -1 N VAL A 407 O ALA A 689 SHEET 6 F 7 SER A 624 SER A 628 -1 O VAL A 627 N MET A 408 SHEET 7 F 7 VAL A 617 TYR A 619 -1 N LEU A 618 O TYR A 626 SHEET 1 G 4 ASN A 402 ARG A 403 0 SHEET 2 G 4 GLY A 700 GLY A 704 -1 O TRP A 702 N ASN A 402 SHEET 3 G 4 ARG A 707 MET A 715 -1 O ALA A 709 N PHE A 701 SHEET 4 G 4 THR A 718 MET A 728 -1 O LYS A 724 N VAL A 712 SHEET 1 H 3 ILE A 430 THR A 433 0 SHEET 2 H 3 MET A 461 TYR A 463 -1 O MET A 462 N ALA A 431 SHEET 3 H 3 SER A 455 SER A 457 -1 N SER A 455 O TYR A 463 SHEET 1 I 3 SER A 781 SER A 784 0 SHEET 2 I 3 LYS A 829 PRO A 834 -1 O VAL A 830 N SER A 783 SHEET 3 I 3 CYS A 845 PRO A 849 -1 O TRP A 848 N TYR A 831 SHEET 1 J 2 ASP A 792 VAL A 793 0 SHEET 2 J 2 PHE A 796 PRO A 797 -1 O PHE A 796 N VAL A 793 LINK OD2 ASP A 114 MG MG A 907 1555 1555 2.80 LINK OE2 GLU A 116 MG MG A 907 1555 1555 2.45 LINK OD1 ASP A 411 MG MG A 903 1555 1555 1.92 LINK OD2 ASP A 411 MG MG A 904 1555 1555 2.30 LINK O LEU A 412 MG MG A 903 1555 1555 2.21 LINK O ASN A 505 MG MG A 905 1555 1555 2.91 LINK O LYS A 531 MG MG A 905 1555 1555 2.68 LINK OD1 ASP A 623 MG MG A 903 1555 1555 2.11 LINK OD2 ASP A 623 MG MG A 904 1555 1555 1.98 LINK O2B UPC A 902 MG MG A 903 1555 1555 2.02 LINK O1G UPC A 902 MG MG A 903 1555 1555 2.04 LINK O2A UPC A 902 MG MG A 903 1555 1555 2.27 LINK O2A UPC A 902 MG MG A 904 1555 1555 2.23 LINK MG MG A 904 O HOH A1267 1555 1555 2.52 LINK MG MG A 904 O3' DC P 115 1555 1555 2.28 LINK MG MG A 904 O HOH P 493 1555 1555 1.89 LINK MG MG A 906 O HOH A 936 1555 1555 2.45 LINK MG MG A 906 O HOH A 973 1555 1555 2.43 LINK MG MG A 906 O HOH A1014 1555 1555 2.34 LINK MG MG A 906 O HOH A1180 1555 1555 2.49 LINK MG MG A 906 O HOH A1228 1555 1555 1.90 LINK MG MG A 907 O HOH A1222 1555 1555 2.48 SITE 1 AC1 23 ASP A 411 LEU A 412 THR A 413 SER A 414 SITE 2 AC1 23 ALA A 415 TYR A 416 ARG A 482 LYS A 560 SITE 3 AC1 23 ASN A 564 THR A 622 ASP A 623 MG A 903 SITE 4 AC1 23 MG A 904 HOH A 931 HOH A 965 HOH A1014 SITE 5 AC1 23 HOH A1104 HOH A1180 HOH A1199 HOH A1267 SITE 6 AC1 23 DC P 115 DA T 4 DG T 5 SITE 1 AC2 5 ASP A 411 LEU A 412 ASP A 623 UPC A 902 SITE 2 AC2 5 MG A 904 SITE 1 AC3 7 ASP A 411 ASP A 623 UPC A 902 MG A 903 SITE 2 AC3 7 HOH A1267 DC P 115 HOH P 493 SITE 1 AC4 6 ALA A 502 ASN A 505 PRO A 506 ILE A 530 SITE 2 AC4 6 LYS A 531 LEU A 533 SITE 1 AC5 6 LYS A 486 HOH A 936 HOH A 973 HOH A1014 SITE 2 AC5 6 HOH A1180 HOH A1228 SITE 1 AC6 3 ASP A 114 GLU A 116 HOH A1222 CRYST1 75.336 120.598 130.812 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013274 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008292 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007645 0.00000