PDB Short entry for 3SZA HEADER OXIDOREDUCTASE 18-JUL-11 3SZA TITLE CRYSTAL STRUCTURE OF HUMAN ALDH3A1 - APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDEHYDE DEHYDROGENASE, DIMERIC NADP-PREFERRING; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ALDHIII, ALDEHYDE DEHYDROGENASE 3, ALDEHYDE DEHYDROGENASE COMPND 5 FAMILY 3 MEMBER A1; COMPND 6 EC: 1.2.1.5; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ALDH3, ALDH3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-28A KEYWDS ALDH, ROSSMANN FOLD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.KHANNA,T.D.HURLEY REVDAT 5 13-SEP-23 3SZA 1 REMARK SEQADV REVDAT 4 24-JAN-18 3SZA 1 JRNL REVDAT 3 08-NOV-17 3SZA 1 REMARK REVDAT 2 28-DEC-11 3SZA 1 JRNL REVDAT 1 02-NOV-11 3SZA 0 JRNL AUTH M.KHANNA,C.H.CHEN,A.KIMBLE-HILL,B.PARAJULI,S.PEREZ-MILLER, JRNL AUTH 2 S.BASKARAN,J.KIM,K.DRIA,V.VASILIOU,D.MOCHLY-ROSEN,T.D.HURLEY JRNL TITL DISCOVERY OF A NOVEL CLASS OF COVALENT INHIBITOR FOR JRNL TITL 2 ALDEHYDE DEHYDROGENASES. JRNL REF J.BIOL.CHEM. V. 286 43486 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 22021038 JRNL DOI 10.1074/JBC.M111.293597 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.K.HO,A.MUKHOPADHYAY,Y.F.LI,S.MUKHOPADHYAY,H.WEINER REMARK 1 TITL A POINT MUTATION PRODUCED A CLASS 3 ALDEHYDE DEHYDROGENASE REMARK 1 TITL 2 WITH INCREASED PROTECTIVE ABILITY AGAINST THE KILLING EFFECT REMARK 1 TITL 3 OF CYCLOPHOSPHAMIDE. REMARK 1 REF BIOCHEM PHARMACOL V. 76 690 2008 REMARK 1 PMID 18647600 REMARK 1 DOI 10.1016/J.BCP.2008.06.018 REMARK 1 REFERENCE 2 REMARK 1 AUTH Z.J.LIU,Y.J.SUN,J.ROSE,Y.J.CHUNG,C.D.HSIAO,W.R.CHANG,I.KUO, REMARK 1 AUTH 2 J.PEROZICH,R.LINDAHL,J.HEMPEL,B.C.WANG REMARK 1 TITL THE FIRST STRUCTURE OF AN ALDEHYDE DEHYDROGENASE REVEALS REMARK 1 TITL 2 NOVEL INTERACTIONS BETWEEN NAD AND THE ROSSMANN FOLD REMARK 1 REF NAT.STRUCT.MOL.BIOL. V. 4 317 1997 REMARK 1 REFN ISSN 1545-9993 REMARK 2 REMARK 2 RESOLUTION. 1.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 146724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7380 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.48 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.52 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9405 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 507 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7019 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 1087 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.56000 REMARK 3 B22 (A**2) : 0.95000 REMARK 3 B33 (A**2) : -0.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.069 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.054 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7343 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9960 ; 1.545 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 902 ; 5.950 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 324 ;37.452 ;24.537 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1337 ;12.394 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;14.454 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1137 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5471 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4537 ; 0.898 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7395 ; 1.611 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2806 ; 2.668 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2564 ; 4.453 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3SZA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066838. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9869 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 146816 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.480 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.32700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1AD3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM ACETATE, 18% PEG 3350, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.70600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.19800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.04000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.19800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.70600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.04000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 LYS A 448 REMARK 465 MET A 449 REMARK 465 THR A 450 REMARK 465 GLN A 451 REMARK 465 HIS A 452 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 LEU B -7 REMARK 465 VAL B -6 REMARK 465 PRO B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 760 O HOH A 821 2.07 REMARK 500 OD2 ASP A 370 O HOH A 465 2.09 REMARK 500 O HOH B 671 O HOH B 971 2.10 REMARK 500 OD1 ASP A 370 O HOH A 708 2.11 REMARK 500 O HOH B 673 O HOH B 988 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 62 -69.82 -152.02 REMARK 500 LEU A 210 -149.97 -117.84 REMARK 500 ASN A 221 14.03 55.67 REMARK 500 PRO A 337 59.61 -92.65 REMARK 500 ILE A 391 -45.66 72.68 REMARK 500 HIS A 413 133.36 97.90 REMARK 500 GLU B 62 -68.84 -154.13 REMARK 500 LEU B 210 -150.03 -113.59 REMARK 500 ASP B 223 96.32 -68.29 REMARK 500 ILE B 391 -44.43 71.63 REMARK 500 HIS B 413 132.99 99.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SZ9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN ALDH2 MODIFIED WITH THE BETA-ELIMINATION REMARK 900 PRODUCT OF ALDI-3; 1-(4-ETHYLBENZENE)PROP- 2-EN-1-ONE REMARK 900 RELATED ID: 3SZB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN ALDH3A1 MODIFIED WITH THE BETA- REMARK 900 ELIMINATION PRODUCT OF ALDI-1; 1-PHENYL-2-PROPEN-1-ONE DBREF 3SZA A 0 452 UNP P30838 AL3A1_HUMAN 1 453 DBREF 3SZA B 0 452 UNP P30838 AL3A1_HUMAN 1 453 SEQADV 3SZA HIS A -16 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS A -15 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS A -14 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS A -13 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS A -12 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS A -11 UNP P30838 EXPRESSION TAG SEQADV 3SZA SER A -10 UNP P30838 EXPRESSION TAG SEQADV 3SZA SER A -9 UNP P30838 EXPRESSION TAG SEQADV 3SZA GLY A -8 UNP P30838 EXPRESSION TAG SEQADV 3SZA LEU A -7 UNP P30838 EXPRESSION TAG SEQADV 3SZA VAL A -6 UNP P30838 EXPRESSION TAG SEQADV 3SZA PRO A -5 UNP P30838 EXPRESSION TAG SEQADV 3SZA ARG A -4 UNP P30838 EXPRESSION TAG SEQADV 3SZA GLY A -3 UNP P30838 EXPRESSION TAG SEQADV 3SZA SER A -2 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS A -1 UNP P30838 EXPRESSION TAG SEQADV 3SZA ALA A 133 UNP P30838 SER 134 VARIANT SEQADV 3SZA HIS B -16 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS B -15 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS B -14 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS B -13 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS B -12 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS B -11 UNP P30838 EXPRESSION TAG SEQADV 3SZA SER B -10 UNP P30838 EXPRESSION TAG SEQADV 3SZA SER B -9 UNP P30838 EXPRESSION TAG SEQADV 3SZA GLY B -8 UNP P30838 EXPRESSION TAG SEQADV 3SZA LEU B -7 UNP P30838 EXPRESSION TAG SEQADV 3SZA VAL B -6 UNP P30838 EXPRESSION TAG SEQADV 3SZA PRO B -5 UNP P30838 EXPRESSION TAG SEQADV 3SZA ARG B -4 UNP P30838 EXPRESSION TAG SEQADV 3SZA GLY B -3 UNP P30838 EXPRESSION TAG SEQADV 3SZA SER B -2 UNP P30838 EXPRESSION TAG SEQADV 3SZA HIS B -1 UNP P30838 EXPRESSION TAG SEQADV 3SZA ALA B 133 UNP P30838 SER 134 VARIANT SEQRES 1 A 469 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 469 GLY SER HIS MET SER LYS ILE SER GLU ALA VAL LYS ARG SEQRES 3 A 469 ALA ARG ALA ALA PHE SER SER GLY ARG THR ARG PRO LEU SEQRES 4 A 469 GLN PHE ARG ILE GLN GLN LEU GLU ALA LEU GLN ARG LEU SEQRES 5 A 469 ILE GLN GLU GLN GLU GLN GLU LEU VAL GLY ALA LEU ALA SEQRES 6 A 469 ALA ASP LEU HIS LYS ASN GLU TRP ASN ALA TYR TYR GLU SEQRES 7 A 469 GLU VAL VAL TYR VAL LEU GLU GLU ILE GLU TYR MET ILE SEQRES 8 A 469 GLN LYS LEU PRO GLU TRP ALA ALA ASP GLU PRO VAL GLU SEQRES 9 A 469 LYS THR PRO GLN THR GLN GLN ASP GLU LEU TYR ILE HIS SEQRES 10 A 469 SER GLU PRO LEU GLY VAL VAL LEU VAL ILE GLY THR TRP SEQRES 11 A 469 ASN TYR PRO PHE ASN LEU THR ILE GLN PRO MET VAL GLY SEQRES 12 A 469 ALA ILE ALA ALA GLY ASN ALA VAL VAL LEU LYS PRO SER SEQRES 13 A 469 GLU LEU SER GLU ASN MET ALA SER LEU LEU ALA THR ILE SEQRES 14 A 469 ILE PRO GLN TYR LEU ASP LYS ASP LEU TYR PRO VAL ILE SEQRES 15 A 469 ASN GLY GLY VAL PRO GLU THR THR GLU LEU LEU LYS GLU SEQRES 16 A 469 ARG PHE ASP HIS ILE LEU TYR THR GLY SER THR GLY VAL SEQRES 17 A 469 GLY LYS ILE ILE MET THR ALA ALA ALA LYS HIS LEU THR SEQRES 18 A 469 PRO VAL THR LEU GLU LEU GLY GLY LYS SER PRO CYS TYR SEQRES 19 A 469 VAL ASP LYS ASN CYS ASP LEU ASP VAL ALA CYS ARG ARG SEQRES 20 A 469 ILE ALA TRP GLY LYS PHE MET ASN SER GLY GLN THR CYS SEQRES 21 A 469 VAL ALA PRO ASP TYR ILE LEU CYS ASP PRO SER ILE GLN SEQRES 22 A 469 ASN GLN ILE VAL GLU LYS LEU LYS LYS SER LEU LYS GLU SEQRES 23 A 469 PHE TYR GLY GLU ASP ALA LYS LYS SER ARG ASP TYR GLY SEQRES 24 A 469 ARG ILE ILE SER ALA ARG HIS PHE GLN ARG VAL MET GLY SEQRES 25 A 469 LEU ILE GLU GLY GLN LYS VAL ALA TYR GLY GLY THR GLY SEQRES 26 A 469 ASP ALA ALA THR ARG TYR ILE ALA PRO THR ILE LEU THR SEQRES 27 A 469 ASP VAL ASP PRO GLN SER PRO VAL MET GLN GLU GLU ILE SEQRES 28 A 469 PHE GLY PRO VAL LEU PRO ILE VAL CYS VAL ARG SER LEU SEQRES 29 A 469 GLU GLU ALA ILE GLN PHE ILE ASN GLN ARG GLU LYS PRO SEQRES 30 A 469 LEU ALA LEU TYR MET PHE SER SER ASN ASP LYS VAL ILE SEQRES 31 A 469 LYS LYS MET ILE ALA GLU THR SER SER GLY GLY VAL ALA SEQRES 32 A 469 ALA ASN ASP VAL ILE VAL HIS ILE THR LEU HIS SER LEU SEQRES 33 A 469 PRO PHE GLY GLY VAL GLY ASN SER GLY MET GLY SER TYR SEQRES 34 A 469 HIS GLY LYS LYS SER PHE GLU THR PHE SER HIS ARG ARG SEQRES 35 A 469 SER CYS LEU VAL ARG PRO LEU MET ASN ASP GLU GLY LEU SEQRES 36 A 469 LYS VAL ARG TYR PRO PRO SER PRO ALA LYS MET THR GLN SEQRES 37 A 469 HIS SEQRES 1 B 469 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 B 469 GLY SER HIS MET SER LYS ILE SER GLU ALA VAL LYS ARG SEQRES 3 B 469 ALA ARG ALA ALA PHE SER SER GLY ARG THR ARG PRO LEU SEQRES 4 B 469 GLN PHE ARG ILE GLN GLN LEU GLU ALA LEU GLN ARG LEU SEQRES 5 B 469 ILE GLN GLU GLN GLU GLN GLU LEU VAL GLY ALA LEU ALA SEQRES 6 B 469 ALA ASP LEU HIS LYS ASN GLU TRP ASN ALA TYR TYR GLU SEQRES 7 B 469 GLU VAL VAL TYR VAL LEU GLU GLU ILE GLU TYR MET ILE SEQRES 8 B 469 GLN LYS LEU PRO GLU TRP ALA ALA ASP GLU PRO VAL GLU SEQRES 9 B 469 LYS THR PRO GLN THR GLN GLN ASP GLU LEU TYR ILE HIS SEQRES 10 B 469 SER GLU PRO LEU GLY VAL VAL LEU VAL ILE GLY THR TRP SEQRES 11 B 469 ASN TYR PRO PHE ASN LEU THR ILE GLN PRO MET VAL GLY SEQRES 12 B 469 ALA ILE ALA ALA GLY ASN ALA VAL VAL LEU LYS PRO SER SEQRES 13 B 469 GLU LEU SER GLU ASN MET ALA SER LEU LEU ALA THR ILE SEQRES 14 B 469 ILE PRO GLN TYR LEU ASP LYS ASP LEU TYR PRO VAL ILE SEQRES 15 B 469 ASN GLY GLY VAL PRO GLU THR THR GLU LEU LEU LYS GLU SEQRES 16 B 469 ARG PHE ASP HIS ILE LEU TYR THR GLY SER THR GLY VAL SEQRES 17 B 469 GLY LYS ILE ILE MET THR ALA ALA ALA LYS HIS LEU THR SEQRES 18 B 469 PRO VAL THR LEU GLU LEU GLY GLY LYS SER PRO CYS TYR SEQRES 19 B 469 VAL ASP LYS ASN CYS ASP LEU ASP VAL ALA CYS ARG ARG SEQRES 20 B 469 ILE ALA TRP GLY LYS PHE MET ASN SER GLY GLN THR CYS SEQRES 21 B 469 VAL ALA PRO ASP TYR ILE LEU CYS ASP PRO SER ILE GLN SEQRES 22 B 469 ASN GLN ILE VAL GLU LYS LEU LYS LYS SER LEU LYS GLU SEQRES 23 B 469 PHE TYR GLY GLU ASP ALA LYS LYS SER ARG ASP TYR GLY SEQRES 24 B 469 ARG ILE ILE SER ALA ARG HIS PHE GLN ARG VAL MET GLY SEQRES 25 B 469 LEU ILE GLU GLY GLN LYS VAL ALA TYR GLY GLY THR GLY SEQRES 26 B 469 ASP ALA ALA THR ARG TYR ILE ALA PRO THR ILE LEU THR SEQRES 27 B 469 ASP VAL ASP PRO GLN SER PRO VAL MET GLN GLU GLU ILE SEQRES 28 B 469 PHE GLY PRO VAL LEU PRO ILE VAL CYS VAL ARG SER LEU SEQRES 29 B 469 GLU GLU ALA ILE GLN PHE ILE ASN GLN ARG GLU LYS PRO SEQRES 30 B 469 LEU ALA LEU TYR MET PHE SER SER ASN ASP LYS VAL ILE SEQRES 31 B 469 LYS LYS MET ILE ALA GLU THR SER SER GLY GLY VAL ALA SEQRES 32 B 469 ALA ASN ASP VAL ILE VAL HIS ILE THR LEU HIS SER LEU SEQRES 33 B 469 PRO PHE GLY GLY VAL GLY ASN SER GLY MET GLY SER TYR SEQRES 34 B 469 HIS GLY LYS LYS SER PHE GLU THR PHE SER HIS ARG ARG SEQRES 35 B 469 SER CYS LEU VAL ARG PRO LEU MET ASN ASP GLU GLY LEU SEQRES 36 B 469 LYS VAL ARG TYR PRO PRO SER PRO ALA LYS MET THR GLN SEQRES 37 B 469 HIS HET K A 602 1 HET K A 603 1 HET ACT A 701 4 HET K B 601 1 HET K B 603 1 HET ACT B 701 4 HETNAM K POTASSIUM ION HETNAM ACT ACETATE ION FORMUL 3 K 4(K 1+) FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 9 HOH *1087(H2 O) HELIX 1 1 SER A 1 SER A 16 1 16 HELIX 2 2 PRO A 21 GLN A 39 1 19 HELIX 3 3 GLN A 39 HIS A 52 1 14 HELIX 4 4 ASN A 54 GLU A 61 1 8 HELIX 5 5 GLU A 62 ALA A 82 1 21 HELIX 6 6 THR A 89 GLN A 93 5 5 HELIX 7 7 PHE A 117 ALA A 130 1 14 HELIX 8 8 SER A 142 LEU A 157 1 16 HELIX 9 9 GLY A 168 LEU A 176 1 9 HELIX 10 10 SER A 188 LYS A 201 1 14 HELIX 11 11 ASP A 223 MET A 237 1 15 HELIX 12 12 ASN A 238 GLN A 241 5 4 HELIX 13 13 ILE A 255 GLY A 272 1 18 HELIX 14 14 ASP A 274 SER A 278 5 5 HELIX 15 15 SER A 286 GLU A 298 1 13 HELIX 16 16 SER A 327 GLN A 331 5 5 HELIX 17 17 SER A 346 ARG A 357 1 12 HELIX 18 18 ASN A 369 THR A 380 1 12 HELIX 19 19 ILE A 391 THR A 395 5 5 HELIX 20 20 VAL A 404 ASN A 406 5 3 HELIX 21 21 GLY A 414 PHE A 421 1 8 HELIX 22 22 ASP A 435 TYR A 442 5 8 HELIX 23 23 SER B 1 SER B 16 1 16 HELIX 24 24 PRO B 21 GLN B 39 1 19 HELIX 25 25 GLN B 39 HIS B 52 1 14 HELIX 26 26 ASN B 54 GLU B 61 1 8 HELIX 27 27 GLU B 62 ALA B 82 1 21 HELIX 28 28 THR B 89 GLN B 93 5 5 HELIX 29 29 PHE B 117 ALA B 130 1 14 HELIX 30 30 SER B 142 LEU B 157 1 16 HELIX 31 31 GLY B 168 LEU B 176 1 9 HELIX 32 32 SER B 188 LYS B 201 1 14 HELIX 33 33 ASP B 223 MET B 237 1 15 HELIX 34 34 ASN B 238 GLN B 241 5 4 HELIX 35 35 ASP B 252 SER B 254 5 3 HELIX 36 36 ILE B 255 GLY B 272 1 18 HELIX 37 37 ASP B 274 SER B 278 5 5 HELIX 38 38 SER B 286 LEU B 296 1 11 HELIX 39 39 SER B 327 GLN B 331 5 5 HELIX 40 40 SER B 346 ARG B 357 1 12 HELIX 41 41 ASN B 369 THR B 380 1 12 HELIX 42 42 ILE B 391 THR B 395 5 5 HELIX 43 43 VAL B 404 ASN B 406 5 3 HELIX 44 44 GLY B 414 PHE B 421 1 8 HELIX 45 45 ASP B 435 TYR B 442 5 8 SHEET 1 A10 GLU A 84 PRO A 85 0 SHEET 2 A10 GLU A 96 PRO A 103 -1 O ILE A 99 N GLU A 84 SHEET 3 A10 SER A 422 VAL A 429 -1 O ARG A 425 N HIS A 100 SHEET 4 A10 GLY B 384 ALA B 387 1 O ALA B 387 N LEU A 428 SHEET 5 A10 ALA B 362 PHE B 366 1 N LEU B 363 O ALA B 386 SHEET 6 A10 PRO B 215 VAL B 218 1 N TYR B 217 O PHE B 366 SHEET 7 A10 TYR B 248 CYS B 251 1 O LEU B 250 N VAL B 218 SHEET 8 A10 VAL B 338 CYS B 343 1 O VAL B 342 N ILE B 249 SHEET 9 A10 THR B 318 THR B 321 1 N THR B 318 O LEU B 339 SHEET 10 A10 LYS B 301 TYR B 304 -1 N ALA B 303 O ILE B 319 SHEET 1 B 5 ALA A 133 LYS A 137 0 SHEET 2 B 5 VAL A 106 ILE A 110 1 N VAL A 107 O ALA A 133 SHEET 3 B 5 HIS A 182 THR A 186 1 O LEU A 184 N ILE A 110 SHEET 4 B 5 VAL A 206 GLU A 209 1 O GLU A 209 N TYR A 185 SHEET 5 B 5 GLY A 408 MET A 409 -1 O MET A 409 N LEU A 208 SHEET 1 C10 LYS A 301 TYR A 304 0 SHEET 2 C10 THR A 318 THR A 321 -1 O ILE A 319 N ALA A 303 SHEET 3 C10 VAL A 338 CYS A 343 1 O LEU A 339 N THR A 318 SHEET 4 C10 TYR A 248 CYS A 251 1 N ILE A 249 O VAL A 342 SHEET 5 C10 PRO A 215 VAL A 218 1 N VAL A 218 O LEU A 250 SHEET 6 C10 ALA A 362 PHE A 366 1 O PHE A 366 N TYR A 217 SHEET 7 C10 GLY A 384 ALA A 387 1 O ALA A 386 N LEU A 363 SHEET 8 C10 SER B 422 VAL B 429 1 O LEU B 428 N ALA A 387 SHEET 9 C10 GLU B 96 PRO B 103 -1 N HIS B 100 O ARG B 425 SHEET 10 C10 GLU B 84 PRO B 85 -1 N GLU B 84 O ILE B 99 SHEET 1 D 2 GLY A 308 ASP A 309 0 SHEET 2 D 2 TYR A 314 ILE A 315 -1 O TYR A 314 N ASP A 309 SHEET 1 E 5 ALA B 133 LYS B 137 0 SHEET 2 E 5 VAL B 106 ILE B 110 1 N VAL B 107 O VAL B 135 SHEET 3 E 5 HIS B 182 THR B 186 1 O LEU B 184 N ILE B 110 SHEET 4 E 5 VAL B 206 GLU B 209 1 O GLU B 209 N TYR B 185 SHEET 5 E 5 GLY B 408 MET B 409 -1 O MET B 409 N LEU B 208 SHEET 1 F 2 GLY B 308 ASP B 309 0 SHEET 2 F 2 TYR B 314 ILE B 315 -1 O TYR B 314 N ASP B 309 CISPEP 1 PRO A 443 PRO A 444 0 1.93 CISPEP 2 PRO B 443 PRO B 444 0 0.08 SITE 1 AC1 7 LYS A 277 THR A 321 ASP A 322 HOH A 460 SITE 2 AC1 7 HOH A 640 HOH A 660 HOH A 872 SITE 1 AC2 4 LYS A 439 TYR A 442 HOH A 564 HOH A1065 SITE 1 AC3 6 ASN A 434 ASP A 435 LYS A 439 TYR A 442 SITE 2 AC3 6 HOH A 516 ARG B 230 SITE 1 AC4 5 GLU B 79 TRP B 80 ALA B 82 HOH B 524 SITE 2 AC4 5 HOH B 559 SITE 1 AC5 5 LYS B 439 TYR B 442 HOH B 766 HOH B 808 SITE 2 AC5 5 HOH B 926 SITE 1 AC6 6 ARG A 230 ASN B 434 ASP B 435 LYS B 439 SITE 2 AC6 6 TYR B 442 HOH B 467 CRYST1 61.412 86.080 170.396 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016283 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011617 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005869 0.00000