PDB Short entry for 3TEI HEADER TRANSFERASE 15-AUG-11 3TEI TITLE CRYSTAL STRUCTURE OF HUMAN ERK2 COMPLEXED WITH A MAPK DOCKING PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAP KINASE 1, MAPK 1, ERT1, EXTRACELLULAR SIGNAL-REGULATED COMPND 5 KINASE 2, ERK-2, MAP KINASE ISOFORM P42, P42-MAPK, MITOGEN-ACTIVATED COMPND 6 PROTEIN KINASE 2, MAP KINASE 2, MAPK 2; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: RIBOSOMAL PROTEIN S6 KINASE ALPHA-1; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: C-TERMINAL DOCKING PEPTIDE, RESIDUES 712-735; COMPND 14 SYNONYM: S6K-ALPHA-1, 90 KDA RIBOSOMAL PROTEIN S6 KINASE 1, P90-RSK COMPND 15 1, P90RSK1, P90S6K, MAP KINASE-ACTIVATED PROTEIN KINASE 1A, MAPK- COMPND 16 ACTIVATED PROTEIN KINASE 1A, MAPKAP KINASE 1A, MAPKAPK-1A, RIBOSOMAL COMPND 17 S6 KINASE 1, RSK-1; COMPND 18 EC: 2.7.11.1; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPK1, ERK2, PRKM1, PRKM2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.GOGL,A.REMENYI REVDAT 3 13-SEP-23 3TEI 1 REMARK SEQADV REVDAT 2 31-OCT-12 3TEI 1 JRNL REVDAT 1 15-AUG-12 3TEI 0 JRNL AUTH A.GARAI,A.ZEKE,G.GOGL,I.TORO,F.FORDOS,H.BLANKENBURG, JRNL AUTH 2 T.BARKAI,J.VARGA,A.ALEXA,D.EMIG,M.ALBRECHT,A.REMENYI JRNL TITL SPECIFICITY OF LINEAR MOTIFS THAT BIND TO A COMMON JRNL TITL 2 MITOGEN-ACTIVATED PROTEIN KINASE DOCKING GROOVE. JRNL REF SCI.SIGNAL. V. 5 RA74 2012 JRNL REFN ESSN 1937-9145 JRNL PMID 23047924 JRNL DOI 10.1126/SCISIGNAL.2003004 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_713) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 15164 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 749 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0240 - 4.1102 0.93 2952 133 0.1784 0.2106 REMARK 3 2 4.1102 - 3.2626 0.96 2842 167 0.1768 0.2077 REMARK 3 3 3.2626 - 2.8502 0.98 2883 155 0.2190 0.2755 REMARK 3 4 2.8502 - 2.5897 0.98 2859 154 0.2495 0.2999 REMARK 3 5 2.5897 - 2.4041 0.99 2879 140 0.2553 0.2908 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 56.10 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.690 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.81230 REMARK 3 B22 (A**2) : -9.86320 REMARK 3 B33 (A**2) : 11.67550 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2957 REMARK 3 ANGLE : 1.171 4015 REMARK 3 CHIRALITY : 0.089 449 REMARK 3 PLANARITY : 0.007 508 REMARK 3 DIHEDRAL : 19.159 1140 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 10:37) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9017 7.4696 -3.5894 REMARK 3 T TENSOR REMARK 3 T11: 0.2233 T22: 0.2974 REMARK 3 T33: 0.5595 T12: -0.0001 REMARK 3 T13: 0.0863 T23: 0.0695 REMARK 3 L TENSOR REMARK 3 L11: 5.9380 L22: 4.0646 REMARK 3 L33: 3.0454 L12: -0.0456 REMARK 3 L13: 2.2399 L23: 0.0121 REMARK 3 S TENSOR REMARK 3 S11: 0.2708 S12: 0.3187 S13: -0.5084 REMARK 3 S21: -0.6590 S22: -0.1801 S23: -0.8770 REMARK 3 S31: 0.5677 S32: 0.2384 S33: 0.0747 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 38:170) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6383 3.0640 9.2648 REMARK 3 T TENSOR REMARK 3 T11: 0.1287 T22: 0.2387 REMARK 3 T33: 0.3136 T12: 0.0180 REMARK 3 T13: 0.0270 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.4699 L22: 3.1463 REMARK 3 L33: 3.6499 L12: -0.1049 REMARK 3 L13: 0.7519 L23: -2.1602 REMARK 3 S TENSOR REMARK 3 S11: -0.0070 S12: -0.0616 S13: 0.1181 REMARK 3 S21: 0.3360 S22: -0.0052 S23: -0.1642 REMARK 3 S31: 0.1381 S32: -0.0535 S33: 0.0191 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 171:244) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0778 -13.7168 21.0262 REMARK 3 T TENSOR REMARK 3 T11: 0.4713 T22: 0.2693 REMARK 3 T33: 0.1524 T12: -0.0050 REMARK 3 T13: 0.0126 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 6.6101 L22: 3.7521 REMARK 3 L33: 3.9901 L12: -1.9029 REMARK 3 L13: 0.9353 L23: -2.8237 REMARK 3 S TENSOR REMARK 3 S11: 0.1088 S12: 0.3435 S13: -0.3226 REMARK 3 S21: 0.2522 S22: -0.0543 S23: -0.0933 REMARK 3 S31: 0.7244 S32: -0.0880 S33: -0.0758 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 245:275) REMARK 3 ORIGIN FOR THE GROUP (A): -8.2633 -25.5392 30.6380 REMARK 3 T TENSOR REMARK 3 T11: 1.2078 T22: 0.4395 REMARK 3 T33: 0.6121 T12: -0.0296 REMARK 3 T13: -0.0036 T23: 0.0742 REMARK 3 L TENSOR REMARK 3 L11: 5.4854 L22: 4.1781 REMARK 3 L33: 4.9726 L12: -3.9357 REMARK 3 L13: -2.5307 L23: 0.1564 REMARK 3 S TENSOR REMARK 3 S11: -0.5182 S12: -0.2987 S13: -1.3241 REMARK 3 S21: 0.2124 S22: -0.1097 S23: 0.5928 REMARK 3 S31: 0.9237 S32: -0.0011 S33: 0.6842 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 276:318) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3127 -4.5862 33.1840 REMARK 3 T TENSOR REMARK 3 T11: 0.8871 T22: 0.6267 REMARK 3 T33: 0.2346 T12: 0.1771 REMARK 3 T13: 0.0920 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: 3.4340 L22: 4.3633 REMARK 3 L33: 2.5391 L12: -0.6816 REMARK 3 L13: -0.4132 L23: -1.3189 REMARK 3 S TENSOR REMARK 3 S11: -0.1959 S12: -0.9964 S13: -0.0032 REMARK 3 S21: 1.5040 S22: 0.5417 S23: -0.1294 REMARK 3 S31: -0.2557 S32: -0.6887 S33: -0.1378 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 319:358) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4873 -2.5108 0.8913 REMARK 3 T TENSOR REMARK 3 T11: 0.1994 T22: 0.5113 REMARK 3 T33: 0.7708 T12: -0.0886 REMARK 3 T13: 0.0014 T23: 0.0447 REMARK 3 L TENSOR REMARK 3 L11: 1.7737 L22: 1.9820 REMARK 3 L33: 5.2698 L12: -0.3496 REMARK 3 L13: -1.2657 L23: -0.2154 REMARK 3 S TENSOR REMARK 3 S11: -0.1275 S12: 0.0291 S13: -0.6150 REMARK 3 S21: -0.0876 S22: 0.5041 S23: 1.1147 REMARK 3 S31: 0.7208 S32: -1.2568 S33: 0.1504 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): -7.9105 15.7242 25.5842 REMARK 3 T TENSOR REMARK 3 T11: 1.1499 T22: 0.5463 REMARK 3 T33: 0.7066 T12: 0.1680 REMARK 3 T13: -0.0630 T23: -0.1356 REMARK 3 L TENSOR REMARK 3 L11: 0.7334 L22: 1.6696 REMARK 3 L33: 3.1465 L12: -0.9793 REMARK 3 L13: -1.3349 L23: 2.2404 REMARK 3 S TENSOR REMARK 3 S11: -0.3221 S12: -0.4981 S13: 0.0820 REMARK 3 S21: 0.4494 S22: 0.1586 S23: 0.0518 REMARK 3 S31: -0.9157 S32: 0.2242 S33: 0.0175 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TEI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067382. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15190 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 47.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.49 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.41 REMARK 200 R MERGE FOR SHELL (I) : 0.69000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2GPH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27-29% PEG 6000, 0.1M MES, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.85000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.86500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.49000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.86500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.85000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.49000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 ALA A 9 REMARK 465 ASP A 179 REMARK 465 HIS A 180 REMARK 465 THR A 181 REMARK 465 GLY A 182 REMARK 465 PHE A 183 REMARK 465 LEU A 184 REMARK 465 THR A 185 REMARK 465 SER A 202 REMARK 465 LYS A 203 REMARK 465 GLY A 204 REMARK 465 ARG A 359 REMARK 465 SER A 360 REMARK 465 LYS B 729 REMARK 465 LEU B 730 REMARK 465 PRO B 731 REMARK 465 SER B 732 REMARK 465 THR B 733 REMARK 465 THR B 734 REMARK 465 LEU B 735 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 GLU A 186 CG CD OE1 OE2 REMARK 470 ASN A 201 CG OD1 ND2 REMARK 470 TYR A 205 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR A 233 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 253 CG OD1 ND2 REMARK 470 LEU A 258 CG CD1 CD2 REMARK 470 LYS A 259 CG CD CE NZ REMARK 470 ASN A 262 CG OD1 ND2 REMARK 470 ASP A 336 CG OD1 OD2 REMARK 470 ARG B 728 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 36 O HOH A 556 2.13 REMARK 500 N SER A 57 O HOH A 556 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 176 C - N - CA ANGL. DEV. = 11.7 DEGREES REMARK 500 PRO A 176 C - N - CD ANGL. DEV. = -13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 36 -5.16 61.02 REMARK 500 ARG A 148 -17.82 74.60 REMARK 500 ASP A 167 74.36 59.31 REMARK 500 VAL A 188 77.59 66.02 REMARK 500 LEU A 200 -64.04 -99.47 REMARK 500 GLN A 249 -160.69 60.20 REMARK 500 GLU A 250 -18.79 51.98 REMARK 500 ASP A 251 -60.97 -101.89 REMARK 500 ASN A 253 -7.85 81.50 REMARK 500 ARG A 261 -59.19 -141.66 REMARK 500 LEU A 335 -80.09 -83.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 248 GLN A 249 -143.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 401 DBREF 3TEI A 1 360 UNP P28482 MK01_HUMAN 1 360 DBREF 3TEI B 712 735 UNP Q15418 KS6A1_HUMAN 712 735 SEQADV 3TEI GLY A -1 UNP P28482 EXPRESSION TAG SEQADV 3TEI SER A 0 UNP P28482 EXPRESSION TAG SEQADV 3TEI ALA A 77 UNP P28482 ARG 77 ENGINEERED MUTATION SEQADV 3TEI ALA A 314 UNP P28482 GLU 314 ENGINEERED MUTATION SEQRES 1 A 362 GLY SER MET ALA ALA ALA ALA ALA ALA GLY ALA GLY PRO SEQRES 2 A 362 GLU MET VAL ARG GLY GLN VAL PHE ASP VAL GLY PRO ARG SEQRES 3 A 362 TYR THR ASN LEU SER TYR ILE GLY GLU GLY ALA TYR GLY SEQRES 4 A 362 MET VAL CYS SER ALA TYR ASP ASN VAL ASN LYS VAL ARG SEQRES 5 A 362 VAL ALA ILE LYS LYS ILE SER PRO PHE GLU HIS GLN THR SEQRES 6 A 362 TYR CYS GLN ARG THR LEU ARG GLU ILE LYS ILE LEU LEU SEQRES 7 A 362 ALA PHE ARG HIS GLU ASN ILE ILE GLY ILE ASN ASP ILE SEQRES 8 A 362 ILE ARG ALA PRO THR ILE GLU GLN MET LYS ASP VAL TYR SEQRES 9 A 362 ILE VAL GLN ASP LEU MET GLU THR ASP LEU TYR LYS LEU SEQRES 10 A 362 LEU LYS THR GLN HIS LEU SER ASN ASP HIS ILE CYS TYR SEQRES 11 A 362 PHE LEU TYR GLN ILE LEU ARG GLY LEU LYS TYR ILE HIS SEQRES 12 A 362 SER ALA ASN VAL LEU HIS ARG ASP LEU LYS PRO SER ASN SEQRES 13 A 362 LEU LEU LEU ASN THR THR CYS ASP LEU LYS ILE CYS ASP SEQRES 14 A 362 PHE GLY LEU ALA ARG VAL ALA ASP PRO ASP HIS ASP HIS SEQRES 15 A 362 THR GLY PHE LEU THR GLU TYR VAL ALA THR ARG TRP TYR SEQRES 16 A 362 ARG ALA PRO GLU ILE MET LEU ASN SER LYS GLY TYR THR SEQRES 17 A 362 LYS SER ILE ASP ILE TRP SER VAL GLY CYS ILE LEU ALA SEQRES 18 A 362 GLU MET LEU SER ASN ARG PRO ILE PHE PRO GLY LYS HIS SEQRES 19 A 362 TYR LEU ASP GLN LEU ASN HIS ILE LEU GLY ILE LEU GLY SEQRES 20 A 362 SER PRO SER GLN GLU ASP LEU ASN CYS ILE ILE ASN LEU SEQRES 21 A 362 LYS ALA ARG ASN TYR LEU LEU SER LEU PRO HIS LYS ASN SEQRES 22 A 362 LYS VAL PRO TRP ASN ARG LEU PHE PRO ASN ALA ASP SER SEQRES 23 A 362 LYS ALA LEU ASP LEU LEU ASP LYS MET LEU THR PHE ASN SEQRES 24 A 362 PRO HIS LYS ARG ILE GLU VAL GLU GLN ALA LEU ALA HIS SEQRES 25 A 362 PRO TYR LEU ALA GLN TYR TYR ASP PRO SER ASP GLU PRO SEQRES 26 A 362 ILE ALA GLU ALA PRO PHE LYS PHE ASP MET GLU LEU ASP SEQRES 27 A 362 ASP LEU PRO LYS GLU LYS LEU LYS GLU LEU ILE PHE GLU SEQRES 28 A 362 GLU THR ALA ARG PHE GLN PRO GLY TYR ARG SER SEQRES 1 B 24 PRO GLN LEU LYS PRO ILE GLU SER SER ILE LEU ALA GLN SEQRES 2 B 24 ARG ARG VAL ARG LYS LEU PRO SER THR THR LEU HET ANP A 401 31 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER FORMUL 3 ANP C10 H17 N6 O12 P3 FORMUL 4 HOH *115(H2 O) HELIX 1 1 HIS A 61 PHE A 78 1 18 HELIX 2 2 LEU A 112 GLN A 119 1 8 HELIX 3 3 SER A 122 ALA A 143 1 22 HELIX 4 4 LYS A 151 SER A 153 5 3 HELIX 5 5 ALA A 195 ASN A 201 1 7 HELIX 6 6 LYS A 207 ASN A 224 1 18 HELIX 7 7 HIS A 232 GLY A 245 1 14 HELIX 8 8 LEU A 258 SER A 266 1 9 HELIX 9 9 ASP A 283 LEU A 294 1 12 HELIX 10 10 GLU A 303 ALA A 309 1 7 HELIX 11 11 HIS A 310 ALA A 314 5 5 HELIX 12 12 PRO A 339 THR A 351 1 13 HELIX 13 13 ALA A 352 GLN A 355 5 4 HELIX 14 14 PRO B 716 SER B 719 5 4 HELIX 15 15 SER B 720 VAL B 727 1 8 SHEET 1 A 2 GLU A 12 VAL A 14 0 SHEET 2 A 2 GLN A 17 PHE A 19 -1 O PHE A 19 N GLU A 12 SHEET 1 B 5 TYR A 25 GLU A 33 0 SHEET 2 B 5 MET A 38 ASP A 44 -1 O TYR A 43 N THR A 26 SHEET 3 B 5 VAL A 49 ILE A 56 -1 O VAL A 49 N ASP A 44 SHEET 4 B 5 VAL A 101 ASP A 106 -1 O GLN A 105 N ALA A 52 SHEET 5 B 5 ASP A 88 ILE A 90 -1 N ASP A 88 O VAL A 104 SHEET 1 C 3 THR A 110 ASP A 111 0 SHEET 2 C 3 LEU A 155 LEU A 157 -1 O LEU A 157 N THR A 110 SHEET 3 C 3 LEU A 163 ILE A 165 -1 O LYS A 164 N LEU A 156 SHEET 1 D 2 VAL A 145 LEU A 146 0 SHEET 2 D 2 ARG A 172 VAL A 173 -1 O ARG A 172 N LEU A 146 CISPEP 1 GLY A 22 PRO A 23 0 -1.88 CISPEP 2 PRO A 176 ASP A 177 0 8.13 CISPEP 3 TYR A 187 VAL A 188 0 29.54 SITE 1 AC1 18 GLU A 33 GLY A 34 ALA A 35 VAL A 39 SITE 2 AC1 18 ALA A 52 LYS A 54 GLN A 105 ASP A 106 SITE 3 AC1 18 MET A 108 ASP A 111 LYS A 114 SER A 153 SITE 4 AC1 18 ASN A 154 LEU A 156 ASP A 167 HOH A 515 SITE 5 AC1 18 HOH A 549 HOH A 585 CRYST1 41.700 58.980 155.730 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023981 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016955 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006421 0.00000