PDB Short entry for 3TKL HEADER PROTEIN TRANSPORT/PROTEIN BINDING 27-AUG-11 3TKL TITLE CRYSTAL STRUCTURE OF THE GTP-BOUND RAB1A IN COMPLEX WITH THE COILED- TITLE 2 COIL DOMAIN OF LIDA FROM LEGIONELLA PNEUMOPHILA COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED PROTEIN RAB-1A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-191; COMPND 5 SYNONYM: YPT1-RELATED PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: LIDA PROTEIN, SUBSTRATE OF THE DOT/ICM SYSTEM; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: COILED-COIL DOMAIN; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 13 ORGANISM_TAXID: 400673; SOURCE 14 STRAIN: CORBY; SOURCE 15 GENE: LIDA; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS VESICLE TRAFFICKING, PROTEIN TRANSPORT-PROTEIN BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.CHENG,K.YIN,D.LU,B.LI,D.ZHU,Y.CHEN,H.ZHANG,S.XU,J.CHAI,L.GU REVDAT 2 01-NOV-23 3TKL 1 REMARK SEQADV LINK REVDAT 1 27-JUN-12 3TKL 0 JRNL AUTH W.CHENG,K.YIN,D.LU,B.LI,D.ZHU,Y.CHEN,H.ZHANG,S.XU,J.CHAI, JRNL AUTH 2 L.GU JRNL TITL STRUCTURAL INSIGHTS INTO A UNIQUE LEGIONELLA PNEUMOPHILA JRNL TITL 2 EFFECTOR LIDA RECOGNIZING BOTH GDP AND GTP BOUND RAB1 IN JRNL TITL 3 THEIR ACTIVE STATE JRNL REF PLOS PATHOG. V. 8 02528 2012 JRNL REFN ISSN 1553-7366 JRNL PMID 22416225 JRNL DOI 10.1371/JOURNAL.PPAT.1002528 REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 19986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.7888 - 4.1727 0.98 2756 156 0.1814 0.2199 REMARK 3 2 4.1727 - 3.3131 1.00 2750 147 0.1751 0.2192 REMARK 3 3 3.3131 - 2.8947 1.00 2752 150 0.1933 0.2905 REMARK 3 4 2.8947 - 2.6301 1.00 2742 146 0.2168 0.2601 REMARK 3 5 2.6301 - 2.4417 1.00 2714 159 0.2092 0.3157 REMARK 3 6 2.4417 - 2.2978 1.00 2715 135 0.1963 0.2709 REMARK 3 7 2.2978 - 2.1827 0.92 2537 127 0.2064 0.2839 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 37.45 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.57060 REMARK 3 B22 (A**2) : -1.07600 REMARK 3 B33 (A**2) : 1.64660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.21600 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2980 REMARK 3 ANGLE : 1.092 4015 REMARK 3 CHIRALITY : 0.068 454 REMARK 3 PLANARITY : 0.004 504 REMARK 3 DIHEDRAL : 17.235 1156 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TKL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067593. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20017 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.183 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : 0.09100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.29500 REMARK 200 R SYM FOR SHELL (I) : 0.29500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2FOL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 25% PEG3350, 0.7% BUTANOL, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 64.41150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.85450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 64.41150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.85450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 MET A 4 REMARK 465 ASN A 5 REMARK 465 GLY A 177 REMARK 465 PRO A 178 REMARK 465 GLY A 179 REMARK 465 ALA A 180 REMARK 465 THR A 181 REMARK 465 ALA A 182 REMARK 465 GLY A 183 REMARK 465 GLY A 184 REMARK 465 ALA A 185 REMARK 465 GLU A 186 REMARK 465 LYS A 187 REMARK 465 SER A 188 REMARK 465 ASN A 189 REMARK 465 VAL A 190 REMARK 465 LYS A 191 REMARK 465 GLY B 183 REMARK 465 PRO B 184 REMARK 465 LEU B 185 REMARK 465 GLY B 186 REMARK 465 SER B 187 REMARK 465 THR B 188 REMARK 465 SER B 189 REMARK 465 SER B 190 REMARK 465 THR B 191 REMARK 465 SER B 192 REMARK 465 GLN B 193 REMARK 465 ALA B 194 REMARK 465 ASP B 195 REMARK 465 LYS B 196 REMARK 465 GLU B 197 REMARK 465 ILE B 198 REMARK 465 GLN B 199 REMARK 465 LYS B 200 REMARK 465 MET B 201 REMARK 465 LEU B 202 REMARK 465 ASP B 203 REMARK 465 GLU B 204 REMARK 465 TYR B 205 REMARK 465 GLU B 206 REMARK 465 GLN B 207 REMARK 465 ALA B 208 REMARK 465 ILE B 209 REMARK 465 LYS B 210 REMARK 465 ARG B 211 REMARK 465 ALA B 212 REMARK 465 GLN B 213 REMARK 465 GLU B 214 REMARK 465 ASN B 215 REMARK 465 ILE B 216 REMARK 465 LYS B 217 REMARK 465 LYS B 218 REMARK 465 GLY B 219 REMARK 465 GLU B 220 REMARK 465 GLU B 221 REMARK 465 LEU B 222 REMARK 465 GLU B 223 REMARK 465 LYS B 224 REMARK 465 LYS B 225 REMARK 465 LEU B 226 REMARK 465 ASP B 227 REMARK 465 LYS B 228 REMARK 465 LEU B 229 REMARK 465 GLU B 230 REMARK 465 ARG B 231 REMARK 465 GLN B 232 REMARK 465 GLY B 233 REMARK 465 LYS B 234 REMARK 465 ASP B 235 REMARK 465 LEU B 236 REMARK 465 GLU B 237 REMARK 465 ASP B 238 REMARK 465 LYS B 239 REMARK 465 TYR B 240 REMARK 465 LYS B 241 REMARK 465 THR B 242 REMARK 465 TYR B 243 REMARK 465 GLU B 244 REMARK 465 GLU B 245 REMARK 465 ASN B 246 REMARK 465 LEU B 247 REMARK 465 GLU B 248 REMARK 465 GLY B 249 REMARK 465 PHE B 250 REMARK 465 GLU B 251 REMARK 465 LYS B 252 REMARK 465 LEU B 253 REMARK 465 LEU B 254 REMARK 465 THR B 255 REMARK 465 ASP B 256 REMARK 465 ARG B 449 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 74 40.14 -103.44 REMARK 500 LYS A 125 34.72 75.30 REMARK 500 ALA A 158 -3.63 79.06 REMARK 500 LYS B 351 39.82 39.69 REMARK 500 SER B 415 151.11 -45.84 REMARK 500 PRO B 418 -5.66 -47.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 300 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 25 OG REMARK 620 2 THR A 43 OG1 82.7 REMARK 620 3 HOH A 192 O 91.1 81.8 REMARK 620 4 HOH A 194 O 92.5 97.8 176.3 REMARK 620 5 GTP A 301 O2B 97.4 171.7 89.8 90.6 REMARK 620 6 GTP A 301 O1G 168.7 87.0 92.0 84.3 93.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SFV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE GDP-BOUND RAB1A S25N MUTANT IN COMPLEX REMARK 900 WITH THE COILED-COIL DOMAIN OF LIDA FROM LEGIONELLA PNEUMOPHILA DBREF 3TKL A 1 191 UNP P62820 RAB1A_HUMAN 1 191 DBREF 3TKL B 187 449 UNP A5IFX1 A5IFX1_LEGPC 187 449 SEQADV 3TKL GLY A -4 UNP P62820 EXPRESSION TAG SEQADV 3TKL PRO A -3 UNP P62820 EXPRESSION TAG SEQADV 3TKL LEU A -2 UNP P62820 EXPRESSION TAG SEQADV 3TKL GLY A -1 UNP P62820 EXPRESSION TAG SEQADV 3TKL SER A 0 UNP P62820 EXPRESSION TAG SEQADV 3TKL GLY B 183 UNP A5IFX1 EXPRESSION TAG SEQADV 3TKL PRO B 184 UNP A5IFX1 EXPRESSION TAG SEQADV 3TKL LEU B 185 UNP A5IFX1 EXPRESSION TAG SEQADV 3TKL GLY B 186 UNP A5IFX1 EXPRESSION TAG SEQRES 1 A 196 GLY PRO LEU GLY SER MET SER SER MET ASN PRO GLU TYR SEQRES 2 A 196 ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY ASP SER GLY SEQRES 3 A 196 VAL GLY LYS SER CYS LEU LEU LEU ARG PHE ALA ASP ASP SEQRES 4 A 196 THR TYR THR GLU SER TYR ILE SER THR ILE GLY VAL ASP SEQRES 5 A 196 PHE LYS ILE ARG THR ILE GLU LEU ASP GLY LYS THR ILE SEQRES 6 A 196 LYS LEU GLN ILE TRP ASP THR ALA GLY GLN GLU ARG PHE SEQRES 7 A 196 ARG THR ILE THR SER SER TYR TYR ARG GLY ALA HIS GLY SEQRES 8 A 196 ILE ILE VAL VAL TYR ASP VAL THR ASP GLN GLU SER PHE SEQRES 9 A 196 ASN ASN VAL LYS GLN TRP LEU GLN GLU ILE ASP ARG TYR SEQRES 10 A 196 ALA SER GLU ASN VAL ASN LYS LEU LEU VAL GLY ASN LYS SEQRES 11 A 196 CYS ASP LEU THR THR LYS LYS VAL VAL ASP TYR THR THR SEQRES 12 A 196 ALA LYS GLU PHE ALA ASP SER LEU GLY ILE PRO PHE LEU SEQRES 13 A 196 GLU THR SER ALA LYS ASN ALA THR ASN VAL GLU GLN SER SEQRES 14 A 196 PHE MET THR MET ALA ALA GLU ILE LYS LYS ARG MET GLY SEQRES 15 A 196 PRO GLY ALA THR ALA GLY GLY ALA GLU LYS SER ASN VAL SEQRES 16 A 196 LYS SEQRES 1 B 267 GLY PRO LEU GLY SER THR SER SER THR SER GLN ALA ASP SEQRES 2 B 267 LYS GLU ILE GLN LYS MET LEU ASP GLU TYR GLU GLN ALA SEQRES 3 B 267 ILE LYS ARG ALA GLN GLU ASN ILE LYS LYS GLY GLU GLU SEQRES 4 B 267 LEU GLU LYS LYS LEU ASP LYS LEU GLU ARG GLN GLY LYS SEQRES 5 B 267 ASP LEU GLU ASP LYS TYR LYS THR TYR GLU GLU ASN LEU SEQRES 6 B 267 GLU GLY PHE GLU LYS LEU LEU THR ASP SER GLU GLU LEU SEQRES 7 B 267 SER LEU SER GLU ILE ASN GLU LYS MET LYS ALA PHE SER SEQRES 8 B 267 LYS ASP SER GLU LYS LEU THR GLN LEU MET GLU LYS HIS SEQRES 9 B 267 LYS GLY ASP GLU LYS THR VAL GLN SER LEU GLN ARG GLU SEQRES 10 B 267 HIS HIS ASP ILE LYS ALA LYS LEU ALA ASN LEU GLN VAL SEQRES 11 B 267 LEU HIS ASP ALA HIS THR GLY LYS LYS SER TYR VAL ASN SEQRES 12 B 267 GLU LYS GLY ASN PRO VAL SER SER LEU LYS ASP ALA HIS SEQRES 13 B 267 LEU ALA ILE ASN LYS ASP GLN GLU VAL VAL GLU HIS LYS SEQRES 14 B 267 GLY GLN PHE TYR LEU LEU GLN LYS GLY GLN TRP ASP ALA SEQRES 15 B 267 ILE LYS ASN ASP PRO ALA ALA LEU GLU LYS ALA GLN LYS SEQRES 16 B 267 ASP TYR SER GLN SER LYS HIS ASP LEU ALA THR ILE LYS SEQRES 17 B 267 MET GLU ALA LEU ILE HIS LYS LEU SER LEU GLU MET GLU SEQRES 18 B 267 LYS GLN LEU GLU THR ILE ASN ASP LEU ILE MET SER THR SEQRES 19 B 267 ASP PRO LYS GLU ASN GLU GLU ALA THR LYS LEU LEU HIS SEQRES 20 B 267 LYS HIS ASN GLY LEU ASN LEU LYS LEU ALA ASN LEU GLN SEQRES 21 B 267 ASP MET LEU ALA VAL HIS ARG HET MG A 300 1 HET GTP A 301 32 HETNAM MG MAGNESIUM ION HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE FORMUL 3 MG MG 2+ FORMUL 4 GTP C10 H16 N5 O14 P3 FORMUL 5 HOH *111(H2 O) HELIX 1 1 GLY A 23 ASP A 34 1 12 HELIX 2 2 GLN A 70 ARG A 74 5 5 HELIX 3 3 ILE A 76 ARG A 82 1 7 HELIX 4 4 ASP A 95 ASN A 101 1 7 HELIX 5 5 ASN A 101 ALA A 113 1 13 HELIX 6 6 ASP A 135 LEU A 146 1 12 HELIX 7 7 ASN A 160 MET A 176 1 17 HELIX 8 8 SER B 261 HIS B 286 1 26 HELIX 9 9 ASP B 289 THR B 318 1 30 HELIX 10 10 SER B 333 ALA B 337 5 5 HELIX 11 11 GLN B 361 LYS B 366 1 6 HELIX 12 12 ASP B 368 SER B 415 1 48 HELIX 13 13 ASP B 417 HIS B 448 1 32 SHEET 1 A 6 VAL A 46 LEU A 55 0 SHEET 2 A 6 LYS A 58 THR A 67 -1 O LEU A 62 N ARG A 51 SHEET 3 A 6 TYR A 10 ILE A 17 1 N PHE A 12 O GLN A 63 SHEET 4 A 6 GLY A 86 ASP A 92 1 O ILE A 88 N LEU A 15 SHEET 5 A 6 ASN A 118 ASN A 124 1 O ASN A 124 N TYR A 91 SHEET 6 A 6 PHE A 150 THR A 153 1 O THR A 153 N GLY A 123 SHEET 1 B 2 LYS B 321 VAL B 324 0 SHEET 2 B 2 LEU B 339 ASN B 342 -1 O ILE B 341 N SER B 322 SHEET 1 C 2 GLN B 345 HIS B 350 0 SHEET 2 C 2 GLN B 353 GLN B 358 -1 O TYR B 355 N VAL B 348 LINK OG SER A 25 MG MG A 300 1555 1555 2.27 LINK OG1 THR A 43 MG MG A 300 1555 1555 2.28 LINK O HOH A 192 MG MG A 300 1555 1555 2.22 LINK O HOH A 194 MG MG A 300 1555 1555 2.28 LINK MG MG A 300 O2B GTP A 301 1555 1555 2.08 LINK MG MG A 300 O1G GTP A 301 1555 1555 2.10 SITE 1 AC1 5 SER A 25 THR A 43 HOH A 192 HOH A 194 SITE 2 AC1 5 GTP A 301 SITE 1 AC2 26 SER A 20 GLY A 21 VAL A 22 GLY A 23 SITE 2 AC2 26 LYS A 24 SER A 25 CYS A 26 TYR A 36 SITE 3 AC2 26 GLU A 38 TYR A 40 THR A 43 GLY A 69 SITE 4 AC2 26 ASN A 124 LYS A 125 ASP A 127 LEU A 128 SITE 5 AC2 26 LYS A 131 SER A 154 ALA A 155 LYS A 156 SITE 6 AC2 26 HOH A 192 HOH A 194 HOH A 198 HOH A 219 SITE 7 AC2 26 HOH A 244 MG A 300 CRYST1 128.823 49.709 61.702 90.00 99.27 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007763 0.000000 0.001267 0.00000 SCALE2 0.000000 0.020117 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016421 0.00000