PDB Short entry for 3TOJ HEADER TRANSCRIPTION 05-SEP-11 3TOJ TITLE STRUCTURE OF THE SPRY DOMAIN OF HUMAN ASH2L COMPND MOL_ID: 1; COMPND 2 MOLECULE: SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ASH2L SPRY DOMAIN, UNP RESIDUES 370-496, 539-617; COMPND 5 SYNONYM: ASH2-LIKE PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ASH2L, ASH2L1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HISTONE METHYLTRANSFERASE, TRANSCRIPTION, SPRY DOMAIN, PROTEIN KEYWDS 2 BINDING, HISTONE METHYLATION, RBBP5, DPY-30, NUCLEAR EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHEN,F.CAO,B.WAN,Y.DOU,M.LEI REVDAT 3 23-AUG-17 3TOJ 1 SOURCE REMARK REVDAT 2 18-JUL-12 3TOJ 1 JRNL REVDAT 1 25-JAN-12 3TOJ 0 JRNL AUTH Y.CHEN,F.CAO,B.WAN,Y.DOU,M.LEI JRNL TITL STRUCTURE OF THE SPRY DOMAIN OF HUMAN ASH2L AND ITS JRNL TITL 2 INTERACTIONS WITH RBBP5 AND DPY30. JRNL REF CELL RES. V. 22 598 2012 JRNL REFN ISSN 1001-0602 JRNL PMID 22231628 JRNL DOI 10.1038/CR.2012.9 REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 49163 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 4926 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.3095 - 6.4128 0.98 1613 161 0.2220 0.2363 REMARK 3 2 6.4128 - 5.0945 1.00 1540 178 0.1828 0.1929 REMARK 3 3 5.0945 - 4.4519 1.00 1523 169 0.1374 0.1690 REMARK 3 4 4.4519 - 4.0454 1.00 1517 179 0.1439 0.1658 REMARK 3 5 4.0454 - 3.7558 1.00 1514 174 0.1623 0.2045 REMARK 3 6 3.7558 - 3.5345 1.00 1518 154 0.1779 0.1800 REMARK 3 7 3.5345 - 3.3577 1.00 1526 163 0.1748 0.2270 REMARK 3 8 3.3577 - 3.2116 1.00 1481 177 0.1853 0.1934 REMARK 3 9 3.2116 - 3.0880 1.00 1534 150 0.1827 0.2388 REMARK 3 10 3.0880 - 2.9815 1.00 1497 167 0.1864 0.2165 REMARK 3 11 2.9815 - 2.8883 1.00 1484 171 0.1863 0.2234 REMARK 3 12 2.8883 - 2.8058 1.00 1481 170 0.1844 0.2114 REMARK 3 13 2.8058 - 2.7320 1.00 1523 156 0.1853 0.2182 REMARK 3 14 2.7320 - 2.6653 1.00 1466 184 0.1867 0.2317 REMARK 3 15 2.6653 - 2.6047 1.00 1472 186 0.1842 0.2538 REMARK 3 16 2.6047 - 2.5493 1.00 1489 186 0.1873 0.2115 REMARK 3 17 2.5493 - 2.4983 1.00 1491 157 0.1739 0.2094 REMARK 3 18 2.4983 - 2.4512 1.00 1463 166 0.1716 0.2158 REMARK 3 19 2.4512 - 2.4074 1.00 1475 169 0.1710 0.2003 REMARK 3 20 2.4074 - 2.3666 1.00 1498 172 0.1775 0.2279 REMARK 3 21 2.3666 - 2.3285 1.00 1487 160 0.1752 0.2314 REMARK 3 22 2.3285 - 2.2927 1.00 1462 183 0.1720 0.1973 REMARK 3 23 2.2927 - 2.2589 1.00 1482 162 0.1705 0.2151 REMARK 3 24 2.2589 - 2.2271 1.00 1494 160 0.1702 0.2196 REMARK 3 25 2.2271 - 2.1970 1.00 1474 179 0.1652 0.2094 REMARK 3 26 2.1970 - 2.1685 1.00 1439 177 0.1591 0.1976 REMARK 3 27 2.1685 - 2.1414 1.00 1499 167 0.1706 0.2110 REMARK 3 28 2.1414 - 2.1156 1.00 1492 152 0.1856 0.2245 REMARK 3 29 2.1156 - 2.0910 0.99 1468 149 0.2014 0.2590 REMARK 3 30 2.0910 - 2.0700 0.52 835 48 0.2262 0.2470 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 60.29 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.59550 REMARK 3 B22 (A**2) : -2.59550 REMARK 3 B33 (A**2) : 5.19100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3228 REMARK 3 ANGLE : 1.016 4371 REMARK 3 CHIRALITY : 0.079 441 REMARK 3 PLANARITY : 0.005 562 REMARK 3 DIHEDRAL : 12.647 1173 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 275:294) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5863 93.1698 19.6869 REMARK 3 T TENSOR REMARK 3 T11: 0.3404 T22: 0.1688 REMARK 3 T33: 0.2308 T12: 0.0589 REMARK 3 T13: 0.0856 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.2317 L22: 0.4048 REMARK 3 L33: 0.3779 L12: -0.0013 REMARK 3 L13: 0.2191 L23: 0.3035 REMARK 3 S TENSOR REMARK 3 S11: -0.0018 S12: -0.0207 S13: 0.1015 REMARK 3 S21: 0.1123 S22: -0.0088 S23: -0.1823 REMARK 3 S31: 0.0021 S32: 0.0921 S33: 0.0089 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 295:313) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1822 112.2133 7.7484 REMARK 3 T TENSOR REMARK 3 T11: 0.5100 T22: 0.1872 REMARK 3 T33: 0.2205 T12: 0.1332 REMARK 3 T13: -0.0112 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 0.4677 L22: 0.3492 REMARK 3 L33: 0.0149 L12: 0.0276 REMARK 3 L13: -0.0495 L23: -0.0548 REMARK 3 S TENSOR REMARK 3 S11: 0.1097 S12: 0.2109 S13: 0.1434 REMARK 3 S21: -0.4413 S22: -0.0851 S23: 0.1327 REMARK 3 S31: -0.2521 S32: -0.1101 S33: 0.0073 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 314:335) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1624 107.4337 13.8703 REMARK 3 T TENSOR REMARK 3 T11: 0.3506 T22: 0.1348 REMARK 3 T33: 0.3305 T12: 0.1062 REMARK 3 T13: 0.1323 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.4551 L22: 0.7297 REMARK 3 L33: 0.3152 L12: -0.0002 REMARK 3 L13: -0.1124 L23: -0.4146 REMARK 3 S TENSOR REMARK 3 S11: -0.0187 S12: 0.1764 S13: -0.0441 REMARK 3 S21: -0.4094 S22: -0.0605 S23: -0.4432 REMARK 3 S31: -0.0216 S32: 0.0936 S33: -0.0209 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 336:390) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9139 120.0965 11.0371 REMARK 3 T TENSOR REMARK 3 T11: 0.5011 T22: -0.0087 REMARK 3 T33: 0.4727 T12: 0.0710 REMARK 3 T13: 0.1805 T23: 0.0904 REMARK 3 L TENSOR REMARK 3 L11: 0.4739 L22: 0.7823 REMARK 3 L33: 0.8407 L12: 0.0575 REMARK 3 L13: 0.1819 L23: -0.1884 REMARK 3 S TENSOR REMARK 3 S11: -0.0804 S12: 0.3270 S13: 0.3758 REMARK 3 S21: -0.6847 S22: -0.1558 S23: -0.5812 REMARK 3 S31: -0.3666 S32: 0.1605 S33: -0.7925 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 391:461) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9085 110.7272 14.3198 REMARK 3 T TENSOR REMARK 3 T11: 0.3449 T22: 0.2111 REMARK 3 T33: 0.7623 T12: 0.0442 REMARK 3 T13: 0.1641 T23: 0.0652 REMARK 3 L TENSOR REMARK 3 L11: 1.6046 L22: 1.1055 REMARK 3 L33: 1.6901 L12: -0.1271 REMARK 3 L13: -0.0813 L23: -0.5548 REMARK 3 S TENSOR REMARK 3 S11: 0.0445 S12: -0.1274 S13: 0.1715 REMARK 3 S21: -0.2273 S22: -0.0735 S23: -1.0229 REMARK 3 S31: -0.2152 S32: 0.2730 S33: -0.1224 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 462:493) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5973 109.1475 10.9442 REMARK 3 T TENSOR REMARK 3 T11: 0.4398 T22: 0.1791 REMARK 3 T33: 0.3807 T12: 0.0665 REMARK 3 T13: 0.1343 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 0.0983 L22: 0.8470 REMARK 3 L33: 0.4298 L12: -0.2249 REMARK 3 L13: 0.0326 L23: -0.3654 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: 0.0700 S13: 0.0985 REMARK 3 S21: -0.5347 S22: -0.0659 S23: -0.6978 REMARK 3 S31: -0.0490 S32: 0.2228 S33: 0.0574 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 494:511) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5119 93.3727 20.1201 REMARK 3 T TENSOR REMARK 3 T11: 0.3777 T22: 0.2024 REMARK 3 T33: 0.4420 T12: 0.0862 REMARK 3 T13: 0.1471 T23: 0.0560 REMARK 3 L TENSOR REMARK 3 L11: 1.0066 L22: 0.2041 REMARK 3 L33: 0.4710 L12: 0.2378 REMARK 3 L13: 0.6369 L23: 0.2530 REMARK 3 S TENSOR REMARK 3 S11: -0.1612 S12: -0.2229 S13: 0.2501 REMARK 3 S21: 0.0100 S22: -0.1481 S23: -0.4695 REMARK 3 S31: 0.2854 S32: 0.1246 S33: -0.0895 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 275:294) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7357 83.6162 16.6789 REMARK 3 T TENSOR REMARK 3 T11: 0.3110 T22: 0.1320 REMARK 3 T33: 0.2130 T12: 0.0547 REMARK 3 T13: 0.0825 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 0.4525 L22: 0.4565 REMARK 3 L33: 0.4666 L12: -0.0260 REMARK 3 L13: 0.0955 L23: 0.4515 REMARK 3 S TENSOR REMARK 3 S11: -0.0817 S12: -0.0510 S13: 0.1571 REMARK 3 S21: 0.1682 S22: 0.0479 S23: 0.2259 REMARK 3 S31: -0.1380 S32: 0.0049 S33: -0.0754 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 295:313) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5385 71.7624 13.7213 REMARK 3 T TENSOR REMARK 3 T11: 0.2752 T22: 0.2611 REMARK 3 T33: 0.2130 T12: 0.0797 REMARK 3 T13: -0.0490 T23: -0.0714 REMARK 3 L TENSOR REMARK 3 L11: 0.5025 L22: 1.2821 REMARK 3 L33: 0.3289 L12: -0.3754 REMARK 3 L13: -0.1774 L23: 0.0520 REMARK 3 S TENSOR REMARK 3 S11: -0.0959 S12: -0.3103 S13: 0.0194 REMARK 3 S21: 0.3122 S22: 0.2110 S23: -0.1105 REMARK 3 S31: -0.1448 S32: 0.3886 S33: -0.0937 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 314:324) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2689 71.3688 8.6699 REMARK 3 T TENSOR REMARK 3 T11: 0.2291 T22: 0.2232 REMARK 3 T33: 0.2363 T12: 0.0633 REMARK 3 T13: 0.0094 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.1478 L22: 0.6253 REMARK 3 L33: 0.1806 L12: -0.1971 REMARK 3 L13: -0.1442 L23: 0.0580 REMARK 3 S TENSOR REMARK 3 S11: 0.0654 S12: 0.1329 S13: -0.1358 REMARK 3 S21: 0.1034 S22: 0.0376 S23: 0.1602 REMARK 3 S31: 0.0005 S32: -0.1590 S33: -0.0929 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 325:390) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5475 69.9874 -0.7270 REMARK 3 T TENSOR REMARK 3 T11: 0.2783 T22: 0.2639 REMARK 3 T33: 0.1988 T12: 0.0472 REMARK 3 T13: 0.0183 T23: -0.0296 REMARK 3 L TENSOR REMARK 3 L11: 0.4374 L22: 1.0925 REMARK 3 L33: 0.8854 L12: -0.1139 REMARK 3 L13: -0.1668 L23: 0.0309 REMARK 3 S TENSOR REMARK 3 S11: 0.1138 S12: 0.1285 S13: 0.0391 REMARK 3 S21: -0.2999 S22: 0.0329 S23: -0.1651 REMARK 3 S31: 0.0612 S32: 0.1837 S33: -0.1060 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 391:461) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3698 76.7826 -6.1093 REMARK 3 T TENSOR REMARK 3 T11: 0.3368 T22: 0.2841 REMARK 3 T33: 0.1380 T12: 0.0554 REMARK 3 T13: -0.0214 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.6976 L22: 2.9426 REMARK 3 L33: 1.5438 L12: -0.3057 REMARK 3 L13: 0.4570 L23: 0.1129 REMARK 3 S TENSOR REMARK 3 S11: 0.0985 S12: 0.1836 S13: -0.0048 REMARK 3 S21: -0.7316 S22: -0.0755 S23: 0.4018 REMARK 3 S31: -0.1767 S32: -0.5408 S33: -0.0239 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 462:493) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6416 76.4121 3.1507 REMARK 3 T TENSOR REMARK 3 T11: 0.2817 T22: 0.1887 REMARK 3 T33: 0.1858 T12: 0.0158 REMARK 3 T13: 0.0267 T23: -0.0448 REMARK 3 L TENSOR REMARK 3 L11: 0.3949 L22: 0.6133 REMARK 3 L33: 0.7906 L12: -0.0640 REMARK 3 L13: -0.3669 L23: 0.1186 REMARK 3 S TENSOR REMARK 3 S11: 0.0829 S12: 0.0998 S13: 0.0274 REMARK 3 S21: -0.1240 S22: 0.1054 S23: 0.0251 REMARK 3 S31: -0.2850 S32: 0.0465 S33: -0.1321 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 494:512) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4647 85.8997 10.5112 REMARK 3 T TENSOR REMARK 3 T11: 0.3849 T22: 0.2205 REMARK 3 T33: 0.2885 T12: 0.0859 REMARK 3 T13: 0.0762 T23: 0.0743 REMARK 3 L TENSOR REMARK 3 L11: 0.8712 L22: 0.8923 REMARK 3 L33: 0.0690 L12: -0.3256 REMARK 3 L13: 0.0534 L23: 0.2016 REMARK 3 S TENSOR REMARK 3 S11: 0.3394 S12: 0.2148 S13: 0.0829 REMARK 3 S21: 0.0389 S22: -0.1126 S23: 0.1419 REMARK 3 S31: -0.2131 S32: -0.0622 S33: -0.0898 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TOJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067726. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49204 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG4000, 0.15 M LI2SO4, 0.1 M REMARK 280 TRIS, PH8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.26000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 70.52000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 70.52000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 35.26000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 438 REMARK 465 ILE A 439 REMARK 465 SER A 440 REMARK 465 GLY A 441 REMARK 465 ARG A 442 REMARK 465 THR A 512 REMARK 465 LEU A 513 REMARK 465 ALA A 514 REMARK 465 ASP A 515 REMARK 465 VAL A 516 REMARK 465 LEU A 517 REMARK 465 TYR A 518 REMARK 465 HIS A 519 REMARK 465 VAL A 520 REMARK 465 GLU A 521 REMARK 465 THR A 522 REMARK 465 GLU A 523 REMARK 465 THR B 438 REMARK 465 ILE B 439 REMARK 465 SER B 440 REMARK 465 GLY B 441 REMARK 465 ARG B 442 REMARK 465 LEU B 513 REMARK 465 ALA B 514 REMARK 465 ASP B 515 REMARK 465 VAL B 516 REMARK 465 LEU B 517 REMARK 465 TYR B 518 REMARK 465 HIS B 519 REMARK 465 VAL B 520 REMARK 465 GLU B 521 REMARK 465 THR B 522 REMARK 465 GLU B 523 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 465 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 343 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 311 -136.62 57.74 REMARK 500 TYR A 382 -72.67 -144.52 REMARK 500 LYS A 476 -170.76 61.05 REMARK 500 LYS B 311 -133.73 54.05 REMARK 500 ASP B 360 -167.60 -129.41 REMARK 500 LYS B 370 -5.14 71.41 REMARK 500 TYR B 382 -75.35 -141.22 REMARK 500 SER B 383 -169.51 -127.02 REMARK 500 PRO B 399 -104.92 -17.19 REMARK 500 GLU B 400 -82.11 84.00 REMARK 500 LYS B 476 -165.97 58.87 REMARK 500 HIS B 511 -57.54 -163.85 REMARK 500 REMARK 500 REMARK: NULL DBREF 3TOJ A 276 438 UNP Q9UBL3 ASH2L_HUMAN 370 496 DBREF 3TOJ A 445 523 UNP Q9UBL3 ASH2L_HUMAN 539 617 DBREF 3TOJ B 276 438 UNP Q9UBL3 ASH2L_HUMAN 370 496 DBREF 3TOJ B 445 523 UNP Q9UBL3 ASH2L_HUMAN 539 617 SEQADV 3TOJ SER A 275 UNP Q9UBL3 EXPRESSION TAG SEQADV 3TOJ ILE A 439 UNP Q9UBL3 LINKER SEQADV 3TOJ SER A 440 UNP Q9UBL3 LINKER SEQADV 3TOJ GLY A 441 UNP Q9UBL3 LINKER SEQADV 3TOJ ARG A 442 UNP Q9UBL3 LINKER SEQADV 3TOJ GLY A 443 UNP Q9UBL3 LINKER SEQADV 3TOJ SER A 444 UNP Q9UBL3 LINKER SEQADV 3TOJ SER B 275 UNP Q9UBL3 EXPRESSION TAG SEQADV 3TOJ ILE B 439 UNP Q9UBL3 LINKER SEQADV 3TOJ SER B 440 UNP Q9UBL3 LINKER SEQADV 3TOJ GLY B 441 UNP Q9UBL3 LINKER SEQADV 3TOJ ARG B 442 UNP Q9UBL3 LINKER SEQADV 3TOJ GLY B 443 UNP Q9UBL3 LINKER SEQADV 3TOJ SER B 444 UNP Q9UBL3 LINKER SEQRES 1 A 213 SER GLY ASP LEU TYR ARG ALA CYS LEU TYR GLU ARG VAL SEQRES 2 A 213 LEU LEU ALA LEU HIS ASP ARG ALA PRO GLN LEU LYS ILE SEQRES 3 A 213 SER ASP ASP ARG LEU THR VAL VAL GLY GLU LYS GLY TYR SEQRES 4 A 213 SER MET VAL ARG ALA SER HIS GLY VAL ARG LYS GLY ALA SEQRES 5 A 213 TRP TYR PHE GLU ILE THR VAL ASP GLU MET PRO PRO ASP SEQRES 6 A 213 THR ALA ALA ARG LEU GLY TRP SER GLN PRO LEU GLY ASN SEQRES 7 A 213 LEU GLN ALA PRO LEU GLY TYR ASP LYS PHE SER TYR SER SEQRES 8 A 213 TRP ARG SER LYS LYS GLY THR LYS PHE HIS GLN SER ILE SEQRES 9 A 213 GLY LYS HIS TYR SER SER GLY TYR GLY GLN GLY ASP VAL SEQRES 10 A 213 LEU GLY PHE TYR ILE ASN LEU PRO GLU ASP THR ILE SER SEQRES 11 A 213 GLY ARG GLY SER SER GLU ILE ILE PHE TYR LYS ASN GLY SEQRES 12 A 213 VAL ASN GLN GLY VAL ALA TYR LYS ASP ILE PHE GLU GLY SEQRES 13 A 213 VAL TYR PHE PRO ALA ILE SER LEU TYR LYS SER CYS THR SEQRES 14 A 213 VAL SER ILE ASN PHE GLY PRO CYS PHE LYS TYR PRO PRO SEQRES 15 A 213 LYS ASP LEU THR TYR ARG PRO MET SER ASP MET GLY TRP SEQRES 16 A 213 GLY ALA VAL VAL GLU HIS THR LEU ALA ASP VAL LEU TYR SEQRES 17 A 213 HIS VAL GLU THR GLU SEQRES 1 B 213 SER GLY ASP LEU TYR ARG ALA CYS LEU TYR GLU ARG VAL SEQRES 2 B 213 LEU LEU ALA LEU HIS ASP ARG ALA PRO GLN LEU LYS ILE SEQRES 3 B 213 SER ASP ASP ARG LEU THR VAL VAL GLY GLU LYS GLY TYR SEQRES 4 B 213 SER MET VAL ARG ALA SER HIS GLY VAL ARG LYS GLY ALA SEQRES 5 B 213 TRP TYR PHE GLU ILE THR VAL ASP GLU MET PRO PRO ASP SEQRES 6 B 213 THR ALA ALA ARG LEU GLY TRP SER GLN PRO LEU GLY ASN SEQRES 7 B 213 LEU GLN ALA PRO LEU GLY TYR ASP LYS PHE SER TYR SER SEQRES 8 B 213 TRP ARG SER LYS LYS GLY THR LYS PHE HIS GLN SER ILE SEQRES 9 B 213 GLY LYS HIS TYR SER SER GLY TYR GLY GLN GLY ASP VAL SEQRES 10 B 213 LEU GLY PHE TYR ILE ASN LEU PRO GLU ASP THR ILE SER SEQRES 11 B 213 GLY ARG GLY SER SER GLU ILE ILE PHE TYR LYS ASN GLY SEQRES 12 B 213 VAL ASN GLN GLY VAL ALA TYR LYS ASP ILE PHE GLU GLY SEQRES 13 B 213 VAL TYR PHE PRO ALA ILE SER LEU TYR LYS SER CYS THR SEQRES 14 B 213 VAL SER ILE ASN PHE GLY PRO CYS PHE LYS TYR PRO PRO SEQRES 15 B 213 LYS ASP LEU THR TYR ARG PRO MET SER ASP MET GLY TRP SEQRES 16 B 213 GLY ALA VAL VAL GLU HIS THR LEU ALA ASP VAL LEU TYR SEQRES 17 B 213 HIS VAL GLU THR GLU FORMUL 3 HOH *271(H2 O) HELIX 1 1 GLY A 276 ARG A 280 5 5 HELIX 2 2 SER A 501 MET A 503 5 3 HELIX 3 3 GLY B 276 ARG B 280 5 5 HELIX 4 4 SER B 501 MET B 503 5 3 SHEET 1 A 4 TRP A 505 VAL A 508 0 SHEET 2 A 4 CYS A 282 TYR A 284 -1 N LEU A 283 O GLY A 506 SHEET 3 A 4 CYS B 282 TYR B 284 -1 O CYS B 282 N TYR A 284 SHEET 4 A 4 TRP B 505 VAL B 508 -1 O GLY B 506 N LEU B 283 SHEET 1 B 7 LEU A 289 ARG A 294 0 SHEET 2 B 7 SER A 314 ALA A 318 -1 O ARG A 317 N ALA A 290 SHEET 3 B 7 PHE A 469 TYR A 475 -1 O ILE A 472 N VAL A 316 SHEET 4 B 7 ALA A 341 SER A 347 -1 N ALA A 341 O TYR A 475 SHEET 5 B 7 SER A 363 ARG A 367 -1 O TYR A 364 N TRP A 346 SHEET 6 B 7 LYS A 373 HIS A 375 -1 O PHE A 374 N SER A 365 SHEET 7 B 7 ILE A 378 LYS A 380 -1 O LYS A 380 N LYS A 373 SHEET 1 C 7 LYS A 299 ILE A 300 0 SHEET 2 C 7 THR A 306 VAL A 308 -1 O VAL A 308 N LYS A 299 SHEET 3 C 7 THR A 479 ASN A 483 -1 O VAL A 480 N VAL A 307 SHEET 4 C 7 GLY A 325 GLU A 335 -1 N GLU A 330 O ASN A 483 SHEET 5 C 7 VAL A 391 LEU A 398 -1 O LEU A 392 N ILE A 331 SHEET 6 C 7 GLU A 446 LYS A 451 -1 O TYR A 450 N GLY A 393 SHEET 7 C 7 VAL A 454 LYS A 461 -1 O GLN A 456 N PHE A 449 SHEET 1 D 5 LYS A 299 ILE A 300 0 SHEET 2 D 5 THR A 306 VAL A 308 -1 O VAL A 308 N LYS A 299 SHEET 3 D 5 THR A 479 ASN A 483 -1 O VAL A 480 N VAL A 307 SHEET 4 D 5 GLY A 325 GLU A 335 -1 N GLU A 330 O ASN A 483 SHEET 5 D 5 ARG A 498 PRO A 499 1 O ARG A 498 N ALA A 326 SHEET 1 E 7 LEU B 289 ARG B 294 0 SHEET 2 E 7 SER B 314 ALA B 318 -1 O ARG B 317 N ALA B 290 SHEET 3 E 7 PHE B 469 TYR B 475 -1 O ILE B 472 N VAL B 316 SHEET 4 E 7 ALA B 341 SER B 347 -1 N ALA B 341 O TYR B 475 SHEET 5 E 7 SER B 363 ARG B 367 -1 O TYR B 364 N TRP B 346 SHEET 6 E 7 LYS B 373 HIS B 375 -1 O PHE B 374 N SER B 365 SHEET 7 E 7 ILE B 378 LYS B 380 -1 O LYS B 380 N LYS B 373 SHEET 1 F 7 LYS B 299 ILE B 300 0 SHEET 2 F 7 THR B 306 VAL B 308 -1 O VAL B 308 N LYS B 299 SHEET 3 F 7 THR B 479 ASN B 483 -1 O VAL B 480 N VAL B 307 SHEET 4 F 7 GLY B 325 GLU B 335 -1 N GLU B 330 O ASN B 483 SHEET 5 F 7 VAL B 391 LEU B 398 -1 O LEU B 392 N ILE B 331 SHEET 6 F 7 GLU B 446 LYS B 451 -1 O ILE B 448 N TYR B 395 SHEET 7 F 7 VAL B 454 LYS B 461 -1 O GLN B 456 N PHE B 449 SHEET 1 G 5 LYS B 299 ILE B 300 0 SHEET 2 G 5 THR B 306 VAL B 308 -1 O VAL B 308 N LYS B 299 SHEET 3 G 5 THR B 479 ASN B 483 -1 O VAL B 480 N VAL B 307 SHEET 4 G 5 GLY B 325 GLU B 335 -1 N GLU B 330 O ASN B 483 SHEET 5 G 5 ARG B 498 PRO B 499 1 O ARG B 498 N ALA B 326 SSBOND 1 CYS A 487 CYS B 487 1555 1555 2.05 CISPEP 1 GLY A 485 PRO A 486 0 6.76 CISPEP 2 GLY B 485 PRO B 486 0 3.78 CISPEP 3 HIS B 511 THR B 512 0 -1.15 CRYST1 115.289 115.289 105.780 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008674 0.005008 0.000000 0.00000 SCALE2 0.000000 0.010016 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009454 0.00000