PDB Short entry for 3UNP HEADER TRANSPORT PROTEIN 16-NOV-11 3UNP TITLE STRUCTURE OF HUMAN SUN2 SUN DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUN DOMAIN-CONTAINING PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SUN DOMAIN, RESIDUES 520-717; COMPND 5 SYNONYM: PROTEIN UNC-84 HOMOLOG B, RAB5-INTERACTING PROTEIN, RAB5IP, COMPND 6 SAD1/UNC-84 PROTEIN-LIKE 2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SUN2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRIMER, NUCLEAR ENVELOPE, SUN DOMAIN, KASH DOMAIN, LINC COMPLEX, KEYWDS 2 NUCLEAR MIGRATION, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.C.ZHOU,M.I.GREENE REVDAT 3 20-MAR-24 3UNP 1 REMARK SEQADV REVDAT 2 06-MAR-13 3UNP 1 JRNL REVDAT 1 21-DEC-11 3UNP 0 JRNL AUTH Z.C.ZHOU,X.DU,Z.CAI,X.SONG,H.ZHANG,T.MIZUNO,E.SUZUKI, JRNL AUTH 2 M.R.YEE,A.BEREZOV,R.MURALI,S.-L.WU,B.L.KARGER,M.I.GREENE, JRNL AUTH 3 Q.WANG JRNL TITL STRUCTURE OF SAD1-UNC84 HOMOLOGY (SUN) DOMAIN DEFINES JRNL TITL 2 FEATURES OF MOLECULAR BRIDGE IN NUCLEAR ENVELOPE JRNL REF J.BIOL.CHEM. V. 287 5317 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22170055 JRNL DOI 10.1074/JBC.M111.304543 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 8425 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.300 REMARK 3 FREE R VALUE TEST SET COUNT : 967 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 531 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.2600 REMARK 3 BIN FREE R VALUE SET COUNT : 56 REMARK 3 BIN FREE R VALUE : 0.3660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1479 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 59 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.30000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.15000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.286 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.192 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.048 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1524 ; 0.029 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2080 ; 2.668 ; 1.930 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 191 ;10.453 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 69 ;32.942 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 215 ;26.393 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;15.483 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 228 ; 0.224 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1196 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 709 ; 0.302 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 989 ; 0.343 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 75 ; 0.268 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 47 ; 0.518 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.332 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 981 ; 1.826 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1546 ; 2.761 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 614 ; 3.474 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 534 ; 4.955 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UNP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068982. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BSRF REMARK 200 BEAMLINE : 3W1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11047 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE, 1.0M SODIUM ACETATE, REMARK 280 10 MM YCL3, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 39.45900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 22.78166 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 65.97267 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 39.45900 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 22.78166 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 65.97267 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 39.45900 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 22.78166 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 65.97267 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 39.45900 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 22.78166 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 65.97267 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 39.45900 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 22.78166 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 65.97267 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 39.45900 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 22.78166 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 65.97267 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 45.56333 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 131.94533 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 45.56333 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 131.94533 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 45.56333 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 131.94533 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 45.56333 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 131.94533 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 45.56333 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 131.94533 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 45.56333 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 131.94533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 118.37700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 68.34499 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 136.68999 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 519 REMARK 465 LEU A 572 REMARK 465 LEU A 573 REMARK 465 SER A 574 REMARK 465 LEU A 575 REMARK 465 HIS A 717 REMARK 465 HIS A 718 REMARK 465 HIS A 719 REMARK 465 HIS A 720 REMARK 465 HIS A 721 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 520 CG1 CG2 CD1 REMARK 470 ARG A 561 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 566 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR A 568 OG1 CG2 REMARK 470 LYS A 569 CG CD CE NZ REMARK 470 PHE A 576 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 586 OG REMARK 470 GLN A 607 CG CD OE1 NE2 REMARK 470 ASP A 653 CG OD1 OD2 REMARK 470 LEU A 654 CG CD1 CD2 REMARK 470 GLU A 657 CG CD OE1 OE2 REMARK 470 GLN A 679 CG CD OE1 NE2 REMARK 470 GLU A 701 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 570 CA GLY A 577 2.09 REMARK 500 NH1 ARG A 619 O HOH A 34 2.17 REMARK 500 O HIS A 716 O HOH A 46 2.18 REMARK 500 OD2 ASP A 547 O HOH A 5 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 HIS A 583 NE2 HIS A 583 6766 1.78 REMARK 500 CD2 HIS A 583 NE2 HIS A 583 6766 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 554 N GLY A 554 CA 0.092 REMARK 500 ALA A 571 C ALA A 571 O 0.125 REMARK 500 PRO A 700 CD PRO A 700 N 0.126 REMARK 500 PRO A 700 CA PRO A 700 C -0.167 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA A 555 N - CA - CB ANGL. DEV. = -8.8 DEGREES REMARK 500 ALA A 555 N - CA - C ANGL. DEV. = 23.0 DEGREES REMARK 500 GLY A 598 C - N - CA ANGL. DEV. = -14.7 DEGREES REMARK 500 PRO A 700 CA - N - CD ANGL. DEV. = -13.9 DEGREES REMARK 500 PRO A 700 CA - CB - CG ANGL. DEV. = -22.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 542 -43.44 71.88 REMARK 500 SER A 552 -29.11 -35.00 REMARK 500 VAL A 557 -144.71 -95.60 REMARK 500 ILE A 558 51.44 -173.30 REMARK 500 SER A 559 56.41 -100.16 REMARK 500 CYS A 562 -71.01 -39.13 REMARK 500 SER A 563 115.44 113.96 REMARK 500 TYR A 566 39.19 -74.22 REMARK 500 GLU A 567 121.77 170.86 REMARK 500 THR A 568 66.98 -107.98 REMARK 500 ILE A 578 99.20 -26.20 REMARK 500 HIS A 583 -52.67 -136.87 REMARK 500 SER A 584 116.78 114.80 REMARK 500 GLN A 585 109.64 -58.33 REMARK 500 ILE A 638 58.86 -115.97 REMARK 500 LYS A 643 -92.98 -113.01 REMARK 500 ASP A 653 47.13 -45.37 REMARK 500 LEU A 654 -157.96 -168.91 REMARK 500 GLU A 657 120.82 13.53 REMARK 500 PRO A 700 -85.59 -13.47 REMARK 500 ALA A 715 36.07 -59.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 554 ALA A 555 -147.44 REMARK 500 GLU A 567 THR A 568 146.75 REMARK 500 THR A 568 LYS A 569 145.21 REMARK 500 GLU A 652 ASP A 653 139.94 REMARK 500 ALA A 715 HIS A 716 134.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE A 1 DBREF 3UNP A 519 716 UNP Q9UH99 SUN2_HUMAN 520 717 SEQADV 3UNP HIS A 717 UNP Q9UH99 EXPRESSION TAG SEQADV 3UNP HIS A 718 UNP Q9UH99 EXPRESSION TAG SEQADV 3UNP HIS A 719 UNP Q9UH99 EXPRESSION TAG SEQADV 3UNP HIS A 720 UNP Q9UH99 EXPRESSION TAG SEQADV 3UNP HIS A 721 UNP Q9UH99 EXPRESSION TAG SEQRES 1 A 203 VAL ILE GLY VAL THR GLU GLU GLN VAL HIS HIS ILE VAL SEQRES 2 A 203 LYS GLN ALA LEU GLN ARG TYR SER GLU ASP ARG ILE GLY SEQRES 3 A 203 LEU ALA ASP TYR ALA LEU GLU SER GLY GLY ALA SER VAL SEQRES 4 A 203 ILE SER THR ARG CYS SER GLU THR TYR GLU THR LYS THR SEQRES 5 A 203 ALA LEU LEU SER LEU PHE GLY ILE PRO LEU TRP TYR HIS SEQRES 6 A 203 SER GLN SER PRO ARG VAL ILE LEU GLN PRO ASP VAL HIS SEQRES 7 A 203 PRO GLY ASN CYS TRP ALA PHE GLN GLY PRO GLN GLY PHE SEQRES 8 A 203 ALA VAL VAL ARG LEU SER ALA ARG ILE ARG PRO THR ALA SEQRES 9 A 203 VAL THR LEU GLU HIS VAL PRO LYS ALA LEU SER PRO ASN SEQRES 10 A 203 SER THR ILE SER SER ALA PRO LYS ASP PHE ALA ILE PHE SEQRES 11 A 203 GLY PHE ASP GLU ASP LEU GLN GLN GLU GLY THR LEU LEU SEQRES 12 A 203 GLY LYS PHE THR TYR ASP GLN ASP GLY GLU PRO ILE GLN SEQRES 13 A 203 THR PHE HIS PHE GLN ALA PRO THR MET ALA THR TYR GLN SEQRES 14 A 203 VAL VAL GLU LEU ARG ILE LEU THR ASN TRP GLY HIS PRO SEQRES 15 A 203 GLU TYR THR CYS ILE TYR ARG PHE ARG VAL HIS GLY GLU SEQRES 16 A 203 PRO ALA HIS HIS HIS HIS HIS HIS HET ACE A 1 3 HETNAM ACE ACETYL GROUP FORMUL 2 ACE C2 H4 O FORMUL 3 HOH *59(H2 O) HELIX 1 1 THR A 523 GLU A 540 1 18 HELIX 2 2 SER A 586 GLN A 592 5 7 HELIX 3 3 PRO A 629 THR A 637 5 9 SHEET 1 A 2 TRP A 601 GLN A 604 0 SHEET 2 A 2 TYR A 702 ILE A 705 -1 O ILE A 705 N TRP A 601 SHEET 1 B 5 THR A 659 THR A 665 0 SHEET 2 B 5 ASP A 644 GLY A 649 -1 N ILE A 647 O LEU A 661 SHEET 3 B 5 TYR A 686 ILE A 693 -1 O ARG A 692 N ALA A 646 SHEET 4 B 5 GLY A 608 GLU A 626 -1 N ALA A 610 O LEU A 691 SHEET 5 B 5 ILE A 673 HIS A 677 -1 O PHE A 676 N VAL A 623 SHEET 1 C 5 THR A 659 THR A 665 0 SHEET 2 C 5 ASP A 644 GLY A 649 -1 N ILE A 647 O LEU A 661 SHEET 3 C 5 TYR A 686 ILE A 693 -1 O ARG A 692 N ALA A 646 SHEET 4 C 5 GLY A 608 GLU A 626 -1 N ALA A 610 O LEU A 691 SHEET 5 C 5 ARG A 707 PRO A 714 -1 O GLU A 713 N ARG A 619 SITE 1 AC1 2 HIS A 528 MET A 683 CRYST1 78.918 78.918 197.918 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012671 0.007316 0.000000 0.00000 SCALE2 0.000000 0.014632 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005053 0.00000