PDB Short entry for 3UTR HEADER COMPLEX (RIBONUCLEOPROTEIN/RNA) 11-NOV-95 3UTR TITLE HUMAN U1A/U1A PRE-MRNA 3'UTR COMPLEX (THEORETICAL MODEL) COMPND MOL_ID: 1; COMPND 2 MOLECULE: U1A PRE-MRNA (3'UTR); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NUCLEOTIDES 8 - 55; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: U1A; COMPND 8 CHAIN: B, D; COMPND 9 FRAGMENT: RESIDUES 2 - 97 SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 5 ORGANISM_COMMON: HUMAN KEYWDS U1A SPLICEOSOMAL PROTEIN, 3' UNTRANSLATED REGION, KEYWDS 2 POLYADENYLATION, RNA RECOGNITION EXPDTA THEORETICAL MODEL AUTHOR L.JOVINE,C.OUBRIDGE,J.M.AVIS,K.NAGAI REVDAT 1 03-APR-96 3UTR 0 JRNL AUTH L.JOVINE,C.OUBRIDGE,J.M.AVIS,K.NAGAI JRNL TITL TWO STRUCTURALLY DIFFERENT RNA MOLECULES ARE BOUND JRNL TITL 2 BY THE SPLICEOSOMAL PROTEIN U1A USING THE SAME JRNL TITL 3 RECOGNITION STRATEGY. JRNL REF STRUCTURE V. 4 621 1996 JRNL REFN ASTM STRUE6 UK ISSN 0969-2126 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.NAGAI REMARK 1 TITL RNA-PROTEIN COMPLEXES REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 1 REFERENCE 2 REMARK 1 AUTH C.OUBRIDGE,N.ITO,P.R.EVANS,C.-H.TEO,K.NAGAI REMARK 1 TITL CRYSTAL STRUCTURE AT 1.92 ANGSTROMS RESOLUTION OF REMARK 1 TITL 2 THE RNA-BINDING DOMAIN OF THE U1A SPLICEOSOMAL REMARK 1 TITL 3 PROTEIN COMPLEXED WITH AN RNA HAIRPIN REMARK 1 REF NATURE V. 372 432 1994 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 1 REFERENCE 3 REMARK 1 AUTH S.I.GUNDERSON,K.BEYER,G.MARTIN,W.KELLER, REMARK 1 AUTH 2 W.C.BOELENS,I.W.MATTAJ REMARK 1 TITL THE HUMAN U1A SNRNP PROTEIN REGULATES REMARK 1 TITL 2 POLYADENYLATION VIA A DIRECT INTERACTION WITH REMARK 1 TITL 3 POLY(A) POLYMERASE REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 76 531 1994 REMARK 1 REFN ASTM CELLB5 US ISSN 0092-8674 REMARK 1 REFERENCE 4 REMARK 1 AUTH C.W.G.VAN GELDER,S.I.GUNDERSON,E.J.R.JANSEN, REMARK 1 AUTH 2 W.C.BOELENS,M.POLYCARPOU-SCHWARZ,I.W.MATTAJ, REMARK 1 AUTH 3 W.J.VAN VENROOIJ REMARK 1 TITL A COMPLEX SECONDARY STRUCTURE IN U1A PRE-MRNA THAT REMARK 1 TITL 2 BINDS TWO MOLECULES OF U1A PROTEIN IS REQUIRED FOR REMARK 1 TITL 3 REGULATION OF POLYADENYLATION REMARK 1 REF EMBO J. V. 12 5191 1993 REMARK 1 REFN ASTM EMJODG UK ISSN 0261-4189 REMARK 1 REFERENCE 5 REMARK 1 AUTH W.C.BOELENS,E.J.R.JANSEN,W.J.VAN VENROOIJ, REMARK 1 AUTH 2 R.STRIPECKE,I.W.MATTAJ,S.I.GUNDERSON REMARK 1 TITL THE HUMAN U1 SNRNP-SPECIFIC U1A PROTEIN INHIBITS REMARK 1 TITL 2 POLYADENYLATION OF ITS OWN PRE-MRNA REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 72 881 1993 REMARK 1 REFN ASTM CELLB5 US ISSN 0092-8674 REMARK 1 REFERENCE 6 REMARK 1 AUTH C.CHEONG,G.VARANI,I.TINOCO JUNIOR REMARK 1 TITL SOLUTION STRUCTURE OF AN UNUSUALLY STABLE RNA REMARK 1 TITL 2 HAIRPIN, 5'GGAC(UUCG)GUCC REMARK 1 REF NATURE V. 346 680 1990 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 1 REFERENCE 7 REMARK 1 AUTH K.NAGAI,C.OUBRIDGE,T.H.JESSEN,J.LI,P.R.EVANS REMARK 1 TITL CRYSTAL STRUCTURE OF THE RNA-BINDING DOMAIN OF THE REMARK 1 TITL 2 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A REMARK 1 REF NATURE V. 348 515 1990 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UTR COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 5 REMARK 5 ORIGINAL DEPOSITION REVISED PRIOR TO RELEASE REMARK 5 TRACKING NUMBER: T7477, DATE REVISED: 12-DEC-95 REMARK 105 REMARK 105 THE PROTEIN DATA BANK HAS ADOPTED THE SACCHARIDE CHEMISTS REMARK 105 NOMENCLATURE FOR ATOMS OF THE DEOXYRIBOSE/RIBOSE MOIETY REMARK 105 RATHER THAN THAT OF THE NUCLEOSIDE CHEMISTS. THE RING REMARK 105 OXYGEN ATOM IS LABELLED O4* INSTEAD OF O1*. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 98 REMARK 465 LYS D 98 REMARK 999 REMARK 999 REFERENCE REMARK 999 REFERENCE: C.OUBRIDGE ET AL., NATURE (1994) 372,432-438. REMARK 999 REMARK 999 FOR CHAIN "B" - 1 C-TERMINAL RESIDUE NOT IN ATOMS LIST REMARK 999 REMARK 999 FOR CHAIN "D" - 1 C-TERMINAL RESIDUE NOT IN ATOMS LIST DBREF 3UTR B 2 98 UNP P09012 RU1A_HUMAN 2 98 DBREF 3UTR D 2 98 UNP P09012 RU1A_HUMAN 2 98 SEQRES 1 A 48 A C A G C A U U G U A C C SEQRES 2 A 48 C A G A G U C U G U C C C SEQRES 3 A 48 C A G A C A U U G C A C C SEQRES 4 A 48 U G G C G C U G U SEQRES 1 B 97 ALA VAL PRO GLU THR ARG PRO ASN HIS THR ILE TYR ILE SEQRES 2 B 97 ASN ASN LEU ASN GLU LYS ILE LYS LYS ASP GLU LEU LYS SEQRES 3 B 97 LYS SER LEU TYR ALA ILE PHE SER GLN PHE GLY GLN ILE SEQRES 4 B 97 LEU ASP ILE LEU VAL SER ARG SER LEU LYS MET ARG GLY SEQRES 5 B 97 GLN ALA PHE VAL ILE PHE LYS GLU VAL SER SER ALA THR SEQRES 6 B 97 ASN ALA LEU ARG SER MET GLN GLY PHE PRO PHE TYR ASP SEQRES 7 B 97 LYS PRO MET ARG ILE GLN TYR ALA LYS THR ASP SER ASP SEQRES 8 B 97 ILE ILE ALA LYS MET LYS SEQRES 1 D 97 ALA VAL PRO GLU THR ARG PRO ASN HIS THR ILE TYR ILE SEQRES 2 D 97 ASN ASN LEU ASN GLU LYS ILE LYS LYS ASP GLU LEU LYS SEQRES 3 D 97 LYS SER LEU TYR ALA ILE PHE SER GLN PHE GLY GLN ILE SEQRES 4 D 97 LEU ASP ILE LEU VAL SER ARG SER LEU LYS MET ARG GLY SEQRES 5 D 97 GLN ALA PHE VAL ILE PHE LYS GLU VAL SER SER ALA THR SEQRES 6 D 97 ASN ALA LEU ARG SER MET GLN GLY PHE PRO PHE TYR ASP SEQRES 7 D 97 LYS PRO MET ARG ILE GLN TYR ALA LYS THR ASP SER ASP SEQRES 8 D 97 ILE ILE ALA LYS MET LYS FORMUL 4 HOH *304(H2 O1) HELIX 1 1 PRO B 4 THR B 6 5 3 HELIX 2 2 LYS B 23 PHE B 37 1 15 HELIX 3 3 VAL B 62 MET B 72 1 11 HELIX 4 4 ASP B 92 ALA B 95 1 4 HELIX 5 5 PRO D 4 THR D 6 5 3 HELIX 6 6 LYS D 23 PHE D 37 1 15 HELIX 7 7 VAL D 62 MET D 72 1 11 HELIX 8 8 ASP D 92 ALA D 95 1 4 SHEET 1 A 4 ARG B 83 TYR B 86 0 SHEET 2 A 4 THR B 11 ASN B 15 -1 N ASN B 15 O ARG B 83 SHEET 3 A 4 ALA B 55 PHE B 59 -1 N VAL B 57 O ILE B 12 SHEET 4 A 4 ILE B 40 VAL B 45 -1 N LEU B 44 O PHE B 56 SHEET 1 B 4 ARG D 83 TYR D 86 0 SHEET 2 B 4 THR D 11 ASN D 15 -1 N ASN D 15 O ARG D 83 SHEET 3 B 4 ALA D 55 PHE D 59 -1 N VAL D 57 O ILE D 12 SHEET 4 B 4 ILE D 40 VAL D 45 -1 N LEU D 44 O PHE D 56 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000