PDB Short entry for 3UVN HEADER TRANSCRIPTION 30-NOV-11 3UVN TITLE CRYSTAL STRUCTURE OF WDR5 IN COMPLEX WITH THE WDR5-INTERACTING MOTIF TITLE 2 OF SET1A COMPND MOL_ID: 1; COMPND 2 MOLECULE: WD REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 21-334; COMPND 5 SYNONYM: WDR5, BMP2-INDUCED 3-KB GENE PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE SETD1A; COMPND 9 CHAIN: B, D; COMPND 10 FRAGMENT: WDR5-INTERACTING MOTIF (UNP RESIDUES 1492-1502); COMPND 11 SYNONYM: LYSINE N-METHYLTRANSFERASE 2F, SET DOMAIN-CONTAINING PROTEIN COMPND 12 1A, HSET1A, SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT SET1; COMPND 13 EC: 2.1.1.43; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: WDR5, BIG3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS TRITHORAX, CHROMATIN BIOLOGY, BETA-PROPELLER, SCAFFOLDING, HISTONE KEYWDS 2 H3, NUCLEUS, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR P.ZHANG,H.LEE,J.S.BRUNZELLE,J.-F.COUTURE REVDAT 4 13-SEP-23 3UVN 1 SEQADV REVDAT 3 30-MAY-12 3UVN 1 JRNL REVDAT 2 08-FEB-12 3UVN 1 JRNL REVDAT 1 14-DEC-11 3UVN 0 JRNL AUTH P.ZHANG,H.LEE,J.S.BRUNZELLE,J.F.COUTURE JRNL TITL THE PLASTICITY OF WDR5 PEPTIDE-BINDING CLEFT ENABLES THE JRNL TITL 2 BINDING OF THE SET1 FAMILY OF HISTONE METHYLTRANSFERASES. JRNL REF NUCLEIC ACIDS RES. V. 40 4237 2012 JRNL REFN ISSN 0305-1048 JRNL PMID 22266653 JRNL DOI 10.1093/NAR/GKR1235 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 55234 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2799 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.84 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3810 REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3633 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE : 0.2460 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.65 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 177 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4749 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 259 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.64420 REMARK 3 B22 (A**2) : 5.49070 REMARK 3 B33 (A**2) : -10.13500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.10520 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.329 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4866 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6624 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1593 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 104 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 708 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4866 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 658 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5712 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.19 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.19 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.88 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|31 - A|334 } REMARK 3 ORIGIN FOR THE GROUP (A): -16.7181 8.3524 -5.2692 REMARK 3 T TENSOR REMARK 3 T11: -0.1341 T22: -0.0312 REMARK 3 T33: 0.0093 T12: -0.0246 REMARK 3 T13: -0.0160 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 1.7123 L22: 1.5427 REMARK 3 L33: 0.9271 L12: -0.2132 REMARK 3 L13: -0.3704 L23: -0.0091 REMARK 3 S TENSOR REMARK 3 S11: -0.0438 S12: 0.0033 S13: 0.2488 REMARK 3 S21: -0.0754 S22: 0.0834 S23: 0.0935 REMARK 3 S31: 0.0056 S32: -0.0518 S33: -0.0396 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { C|31 - C|334 } REMARK 3 ORIGIN FOR THE GROUP (A): 0.7076 11.8861 -43.5690 REMARK 3 T TENSOR REMARK 3 T11: -0.2339 T22: 0.4014 REMARK 3 T33: -0.1136 T12: -0.0575 REMARK 3 T13: -0.0229 T23: 0.2093 REMARK 3 L TENSOR REMARK 3 L11: 0.4950 L22: 1.6805 REMARK 3 L33: 2.5480 L12: -0.3208 REMARK 3 L13: 0.2958 L23: -1.2859 REMARK 3 S TENSOR REMARK 3 S11: 0.1101 S12: 0.1801 S13: 0.0788 REMARK 3 S21: 0.1205 S22: -0.6166 S23: -0.2711 REMARK 3 S31: -0.0757 S32: 0.9898 S33: 0.5065 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UVN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069265. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12718 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68329 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.792 REMARK 200 RESOLUTION RANGE LOW (A) : 42.401 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.30000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 2H13 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG3350, 0.1 M SODIUM ACETATE, PH REMARK 280 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 23.55000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 17 REMARK 465 ALA A 18 REMARK 465 MET A 19 REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 SER A 22 REMARK 465 ALA A 23 REMARK 465 THR A 24 REMARK 465 GLN A 25 REMARK 465 SER A 26 REMARK 465 LYS A 27 REMARK 465 PRO A 28 REMARK 465 THR A 29 REMARK 465 PRO A 30 REMARK 465 PRO B 1501 REMARK 465 ILE B 1502 REMARK 465 GLY C 17 REMARK 465 ALA C 18 REMARK 465 MET C 19 REMARK 465 GLY C 20 REMARK 465 SER C 21 REMARK 465 SER C 22 REMARK 465 ALA C 23 REMARK 465 THR C 24 REMARK 465 GLN C 25 REMARK 465 SER C 26 REMARK 465 LYS C 27 REMARK 465 PRO C 28 REMARK 465 THR C 29 REMARK 465 PRO C 30 REMARK 465 TYR D 1500 REMARK 465 PRO D 1501 REMARK 465 ILE D 1502 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 32 CG CD CE NZ REMARK 470 LYS A 78 CD CE NZ REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS A 162 CG CD CE NZ REMARK 470 ARG A 181 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 227 CG CD CE NZ REMARK 470 SER A 244 OG REMARK 470 LYS A 245 CG CD CE NZ REMARK 470 LYS A 247 CG CD CE NZ REMARK 470 LYS A 256 CG CD CE NZ REMARK 470 GLU B1497 CG CD OE1 OE2 REMARK 470 LYS C 32 CG CD CE NZ REMARK 470 LYS C 78 CD CE NZ REMARK 470 LYS C 87 CG CD CE NZ REMARK 470 ARG C 181 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 204 CG CD OE1 NE2 REMARK 470 LYS C 207 CG CD CE NZ REMARK 470 ASP C 211 CG OD1 OD2 REMARK 470 LYS C 227 CG CD CE NZ REMARK 470 SER C 244 OG REMARK 470 LYS C 245 CG CD CE NZ REMARK 470 LYS C 247 CG CD CE NZ REMARK 470 GLU D1497 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 212 -125.67 50.02 REMARK 500 LEU A 234 26.56 -76.09 REMARK 500 ASN A 257 89.12 -158.30 REMARK 500 ASP A 324 -64.22 -126.83 REMARK 500 ASP C 212 -120.37 50.17 REMARK 500 LEU C 234 26.34 -74.42 REMARK 500 ASN C 257 89.87 -157.55 REMARK 500 ASP C 324 -65.81 -127.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UVK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WDR5 IN COMPLEX WITH THE WDR5-INTERACTING REMARK 900 MOTIF OF MLL2 REMARK 900 RELATED ID: 3UVL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WDR5 IN COMPLEX WITH THE WDR5-INTERACTING REMARK 900 MOTIF OF MLL3 REMARK 900 RELATED ID: 3UVM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WDR5 IN COMPLEX WITH THE WDR5-INTERACTING REMARK 900 MOTIF OF MLL4 REMARK 900 RELATED ID: 3UVO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WDR5 IN COMPLEX WITH THE WDR5-INTERACTING REMARK 900 MOTIF OF SET1B DBREF 3UVN A 21 334 UNP P61964 WDR5_HUMAN 21 334 DBREF 3UVN B 1492 1502 UNP O15047 SET1A_HUMAN 1492 1502 DBREF 3UVN C 21 334 UNP P61964 WDR5_HUMAN 21 334 DBREF 3UVN D 1492 1502 UNP O15047 SET1A_HUMAN 1492 1502 SEQADV 3UVN GLY A 17 UNP P61964 EXPRESSION TAG SEQADV 3UVN ALA A 18 UNP P61964 EXPRESSION TAG SEQADV 3UVN MET A 19 UNP P61964 EXPRESSION TAG SEQADV 3UVN GLY A 20 UNP P61964 EXPRESSION TAG SEQADV 3UVN GLY C 17 UNP P61964 EXPRESSION TAG SEQADV 3UVN ALA C 18 UNP P61964 EXPRESSION TAG SEQADV 3UVN MET C 19 UNP P61964 EXPRESSION TAG SEQADV 3UVN GLY C 20 UNP P61964 EXPRESSION TAG SEQRES 1 A 318 GLY ALA MET GLY SER SER ALA THR GLN SER LYS PRO THR SEQRES 2 A 318 PRO VAL LYS PRO ASN TYR ALA LEU LYS PHE THR LEU ALA SEQRES 3 A 318 GLY HIS THR LYS ALA VAL SER SER VAL LYS PHE SER PRO SEQRES 4 A 318 ASN GLY GLU TRP LEU ALA SER SER SER ALA ASP LYS LEU SEQRES 5 A 318 ILE LYS ILE TRP GLY ALA TYR ASP GLY LYS PHE GLU LYS SEQRES 6 A 318 THR ILE SER GLY HIS LYS LEU GLY ILE SER ASP VAL ALA SEQRES 7 A 318 TRP SER SER ASP SER ASN LEU LEU VAL SER ALA SER ASP SEQRES 8 A 318 ASP LYS THR LEU LYS ILE TRP ASP VAL SER SER GLY LYS SEQRES 9 A 318 CYS LEU LYS THR LEU LYS GLY HIS SER ASN TYR VAL PHE SEQRES 10 A 318 CYS CYS ASN PHE ASN PRO GLN SER ASN LEU ILE VAL SER SEQRES 11 A 318 GLY SER PHE ASP GLU SER VAL ARG ILE TRP ASP VAL LYS SEQRES 12 A 318 THR GLY LYS CYS LEU LYS THR LEU PRO ALA HIS SER ASP SEQRES 13 A 318 PRO VAL SER ALA VAL HIS PHE ASN ARG ASP GLY SER LEU SEQRES 14 A 318 ILE VAL SER SER SER TYR ASP GLY LEU CYS ARG ILE TRP SEQRES 15 A 318 ASP THR ALA SER GLY GLN CYS LEU LYS THR LEU ILE ASP SEQRES 16 A 318 ASP ASP ASN PRO PRO VAL SER PHE VAL LYS PHE SER PRO SEQRES 17 A 318 ASN GLY LYS TYR ILE LEU ALA ALA THR LEU ASP ASN THR SEQRES 18 A 318 LEU LYS LEU TRP ASP TYR SER LYS GLY LYS CYS LEU LYS SEQRES 19 A 318 THR TYR THR GLY HIS LYS ASN GLU LYS TYR CYS ILE PHE SEQRES 20 A 318 ALA ASN PHE SER VAL THR GLY GLY LYS TRP ILE VAL SER SEQRES 21 A 318 GLY SER GLU ASP ASN LEU VAL TYR ILE TRP ASN LEU GLN SEQRES 22 A 318 THR LYS GLU ILE VAL GLN LYS LEU GLN GLY HIS THR ASP SEQRES 23 A 318 VAL VAL ILE SER THR ALA CYS HIS PRO THR GLU ASN ILE SEQRES 24 A 318 ILE ALA SER ALA ALA LEU GLU ASN ASP LYS THR ILE LYS SEQRES 25 A 318 LEU TRP LYS SER ASP CYS SEQRES 1 B 11 GLY SER ALA ARG SER GLU GLY TYR TYR PRO ILE SEQRES 1 C 318 GLY ALA MET GLY SER SER ALA THR GLN SER LYS PRO THR SEQRES 2 C 318 PRO VAL LYS PRO ASN TYR ALA LEU LYS PHE THR LEU ALA SEQRES 3 C 318 GLY HIS THR LYS ALA VAL SER SER VAL LYS PHE SER PRO SEQRES 4 C 318 ASN GLY GLU TRP LEU ALA SER SER SER ALA ASP LYS LEU SEQRES 5 C 318 ILE LYS ILE TRP GLY ALA TYR ASP GLY LYS PHE GLU LYS SEQRES 6 C 318 THR ILE SER GLY HIS LYS LEU GLY ILE SER ASP VAL ALA SEQRES 7 C 318 TRP SER SER ASP SER ASN LEU LEU VAL SER ALA SER ASP SEQRES 8 C 318 ASP LYS THR LEU LYS ILE TRP ASP VAL SER SER GLY LYS SEQRES 9 C 318 CYS LEU LYS THR LEU LYS GLY HIS SER ASN TYR VAL PHE SEQRES 10 C 318 CYS CYS ASN PHE ASN PRO GLN SER ASN LEU ILE VAL SER SEQRES 11 C 318 GLY SER PHE ASP GLU SER VAL ARG ILE TRP ASP VAL LYS SEQRES 12 C 318 THR GLY LYS CYS LEU LYS THR LEU PRO ALA HIS SER ASP SEQRES 13 C 318 PRO VAL SER ALA VAL HIS PHE ASN ARG ASP GLY SER LEU SEQRES 14 C 318 ILE VAL SER SER SER TYR ASP GLY LEU CYS ARG ILE TRP SEQRES 15 C 318 ASP THR ALA SER GLY GLN CYS LEU LYS THR LEU ILE ASP SEQRES 16 C 318 ASP ASP ASN PRO PRO VAL SER PHE VAL LYS PHE SER PRO SEQRES 17 C 318 ASN GLY LYS TYR ILE LEU ALA ALA THR LEU ASP ASN THR SEQRES 18 C 318 LEU LYS LEU TRP ASP TYR SER LYS GLY LYS CYS LEU LYS SEQRES 19 C 318 THR TYR THR GLY HIS LYS ASN GLU LYS TYR CYS ILE PHE SEQRES 20 C 318 ALA ASN PHE SER VAL THR GLY GLY LYS TRP ILE VAL SER SEQRES 21 C 318 GLY SER GLU ASP ASN LEU VAL TYR ILE TRP ASN LEU GLN SEQRES 22 C 318 THR LYS GLU ILE VAL GLN LYS LEU GLN GLY HIS THR ASP SEQRES 23 C 318 VAL VAL ILE SER THR ALA CYS HIS PRO THR GLU ASN ILE SEQRES 24 C 318 ILE ALA SER ALA ALA LEU GLU ASN ASP LYS THR ILE LYS SEQRES 25 C 318 LEU TRP LYS SER ASP CYS SEQRES 1 D 11 GLY SER ALA ARG SER GLU GLY TYR TYR PRO ILE FORMUL 5 HOH *259(H2 O) HELIX 1 1 SER B 1493 GLY B 1498 1 6 HELIX 2 2 SER D 1493 GLY D 1498 1 6 SHEET 1 A 4 ALA A 36 LEU A 41 0 SHEET 2 A 4 ILE A 327 LYS A 331 -1 O ILE A 327 N LEU A 41 SHEET 3 A 4 ILE A 315 ALA A 320 -1 N SER A 318 O LYS A 328 SHEET 4 A 4 VAL A 304 CYS A 309 -1 N SER A 306 O ALA A 319 SHEET 1 B 4 VAL A 48 PHE A 53 0 SHEET 2 B 4 TRP A 59 SER A 64 -1 O ALA A 61 N LYS A 52 SHEET 3 B 4 ILE A 69 GLY A 73 -1 O LYS A 70 N SER A 62 SHEET 4 B 4 PHE A 79 ILE A 83 -1 O ILE A 83 N ILE A 69 SHEET 1 C 4 ILE A 90 TRP A 95 0 SHEET 2 C 4 LEU A 101 SER A 106 -1 O ALA A 105 N SER A 91 SHEET 3 C 4 THR A 110 ASP A 115 -1 O TRP A 114 N LEU A 102 SHEET 4 C 4 CYS A 121 LYS A 126 -1 O LEU A 125 N LEU A 111 SHEET 1 D 4 VAL A 132 PHE A 137 0 SHEET 2 D 4 LEU A 143 SER A 148 -1 O VAL A 145 N ASN A 136 SHEET 3 D 4 VAL A 153 ASP A 157 -1 O TRP A 156 N ILE A 144 SHEET 4 D 4 CYS A 163 LEU A 167 -1 O LEU A 167 N VAL A 153 SHEET 1 E 4 VAL A 174 PHE A 179 0 SHEET 2 E 4 LEU A 185 SER A 190 -1 O VAL A 187 N HIS A 178 SHEET 3 E 4 CYS A 195 ASP A 199 -1 O TRP A 198 N ILE A 186 SHEET 4 E 4 CYS A 205 LEU A 209 -1 O LEU A 209 N CYS A 195 SHEET 1 F 4 VAL A 217 PHE A 222 0 SHEET 2 F 4 ILE A 229 THR A 233 -1 O LEU A 230 N LYS A 221 SHEET 3 F 4 THR A 237 ASP A 242 -1 O TRP A 241 N ILE A 229 SHEET 4 F 4 LYS A 247 TYR A 252 -1 O LYS A 247 N ASP A 242 SHEET 1 G 4 ALA A 264 SER A 267 0 SHEET 2 G 4 TRP A 273 SER A 276 -1 O VAL A 275 N ASN A 265 SHEET 3 G 4 VAL A 283 ASN A 287 -1 O TYR A 284 N SER A 276 SHEET 4 G 4 ILE A 293 LEU A 297 -1 O VAL A 294 N ILE A 285 SHEET 1 H 4 ALA C 36 LEU C 41 0 SHEET 2 H 4 ILE C 327 LYS C 331 -1 O ILE C 327 N LEU C 41 SHEET 3 H 4 ILE C 315 ALA C 320 -1 N SER C 318 O LYS C 328 SHEET 4 H 4 VAL C 304 CYS C 309 -1 N SER C 306 O ALA C 319 SHEET 1 I 4 VAL C 48 PHE C 53 0 SHEET 2 I 4 TRP C 59 SER C 64 -1 O ALA C 61 N LYS C 52 SHEET 3 I 4 ILE C 69 GLY C 73 -1 O LYS C 70 N SER C 62 SHEET 4 I 4 PHE C 79 ILE C 83 -1 O ILE C 83 N ILE C 69 SHEET 1 J 4 ILE C 90 TRP C 95 0 SHEET 2 J 4 LEU C 101 SER C 106 -1 O ALA C 105 N SER C 91 SHEET 3 J 4 LEU C 111 ASP C 115 -1 O TRP C 114 N LEU C 102 SHEET 4 J 4 CYS C 121 LEU C 125 -1 O LEU C 125 N LEU C 111 SHEET 1 K 4 VAL C 132 PHE C 137 0 SHEET 2 K 4 LEU C 143 SER C 148 -1 O VAL C 145 N ASN C 136 SHEET 3 K 4 VAL C 153 ASP C 157 -1 O TRP C 156 N ILE C 144 SHEET 4 K 4 CYS C 163 LEU C 167 -1 O LEU C 167 N VAL C 153 SHEET 1 L 4 VAL C 174 PHE C 179 0 SHEET 2 L 4 LEU C 185 SER C 190 -1 O VAL C 187 N HIS C 178 SHEET 3 L 4 CYS C 195 ASP C 199 -1 O TRP C 198 N ILE C 186 SHEET 4 L 4 CYS C 205 LEU C 209 -1 O LEU C 209 N CYS C 195 SHEET 1 M 4 VAL C 217 PHE C 222 0 SHEET 2 M 4 ILE C 229 THR C 233 -1 O LEU C 230 N LYS C 221 SHEET 3 M 4 THR C 237 ASP C 242 -1 O TRP C 241 N ILE C 229 SHEET 4 M 4 LYS C 247 TYR C 252 -1 O LYS C 247 N ASP C 242 SHEET 1 N 4 ALA C 264 SER C 267 0 SHEET 2 N 4 TRP C 273 SER C 276 -1 O VAL C 275 N ASN C 265 SHEET 3 N 4 VAL C 283 ASN C 287 -1 O TYR C 284 N SER C 276 SHEET 4 N 4 ILE C 293 LEU C 297 -1 O VAL C 294 N ILE C 285 CRYST1 64.890 47.100 102.520 90.00 108.21 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015411 0.000000 0.005070 0.00000 SCALE2 0.000000 0.021231 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010268 0.00000