PDB Short entry for 3UXA HEADER LYASE 05-DEC-11 3UXA TITLE DESIGNED PROTEIN KE59 R1 7/10H COMPND MOL_ID: 1; COMPND 2 MOLECULE: KEMP ELIMINASE KE59 R1 7/10H; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.-.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, ISRAEL STRUCTURAL PROTEOMICS CENTER, ISPC, BETA KEYWDS 2 BARREL, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR O.KHERSONSKY,G.KISS,D.ROETHLISBERGER,O.DYM,S.ALBECK,K.N.HOUK,D.BAKER, AUTHOR 2 D.S.TAWFIK,ISRAEL STRUCTURAL PROTEOMICS CENTER (ISPC) REVDAT 4 13-SEP-23 3UXA 1 REMARK REVDAT 3 11-JUL-12 3UXA 1 JRNL REVDAT 2 27-JUN-12 3UXA 1 JRNL REVDAT 1 06-JUN-12 3UXA 0 JRNL AUTH O.KHERSONSKY,G.KISS,D.ROTHLISBERGER,O.DYM,S.ALBECK,K.N.HOUK, JRNL AUTH 2 D.BAKER,D.S.TAWFIK JRNL TITL BRIDGING THE GAPS IN DESIGN METHODOLOGIES BY EVOLUTIONARY JRNL TITL 2 OPTIMIZATION OF THE STABILITY AND PROFICIENCY OF DESIGNED JRNL TITL 3 KEMP ELIMINASE KE59. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 10358 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22685214 JRNL DOI 10.1073/PNAS.1121063109 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 16555 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 888 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1221 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3841 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 8 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.79000 REMARK 3 B22 (A**2) : 1.79000 REMARK 3 B33 (A**2) : -2.68000 REMARK 3 B12 (A**2) : 0.89000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.007 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.350 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.268 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.869 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.864 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3896 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5262 ; 1.648 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 492 ; 6.201 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;40.103 ;23.734 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 740 ;19.219 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;22.456 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 628 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2809 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2464 ; 0.608 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3983 ; 1.156 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1432 ; 2.100 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1279 ; 3.454 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3UXA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069324. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17470 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 27.465 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.15900 REMARK 200 R SYM (I) : 0.11100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.70000 REMARK 200 R SYM FOR SHELL (I) : 0.60100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3UYC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM CHLORIDE, 0.1 M SODIUM REMARK 280 ACETATE, PH 5.0, 20% PEG6000, 3-(1-METHYLPIPERIDINUM)-1-PROPANE- REMARK 280 SULFONATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.81167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 79.62333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 249 REMARK 465 SER A 250 REMARK 465 LEU A 251 REMARK 465 GLU A 252 REMARK 465 MET B 1 REMARK 465 GLY B 249 REMARK 465 SER B 250 REMARK 465 LEU B 251 REMARK 465 GLU B 252 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 3 CZ NH1 NH2 REMARK 470 LYS A 6 NZ REMARK 470 ARG A 34 CZ NH1 NH2 REMARK 470 GLU A 35 CG CD OE1 OE2 REMARK 470 GLU A 68 CG CD OE1 OE2 REMARK 470 ARG A 75 CG CD NE CZ NH1 NH2 REMARK 470 THR A 186 OG1 CG2 REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 ASN A 193 OD1 ND2 REMARK 470 LYS A 196 CD CE NZ REMARK 470 ARG A 216 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 220 CD OE1 OE2 REMARK 470 LYS A 224 CD CE NZ REMARK 470 LYS A 242 CG CD CE NZ REMARK 470 LYS A 244 CE NZ REMARK 470 GLU A 245 CG CD OE1 OE2 REMARK 470 ARG B 3 CZ NH1 NH2 REMARK 470 TYR B 4 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 6 NZ REMARK 470 GLN B 14 OE1 NE2 REMARK 470 ARG B 34 CZ NH1 NH2 REMARK 470 GLU B 35 CG CD OE1 OE2 REMARK 470 GLU B 39 CG CD OE1 OE2 REMARK 470 LYS B 42 CE NZ REMARK 470 LYS B 71 CE NZ REMARK 470 ARG B 75 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 97 NE CZ NH1 NH2 REMARK 470 THR B 186 OG1 CG2 REMARK 470 GLU B 188 CG CD OE1 OE2 REMARK 470 LYS B 196 CD CE NZ REMARK 470 ARG B 216 NE CZ NH1 NH2 REMARK 470 GLU B 220 CD OE1 OE2 REMARK 470 LYS B 224 CD CE NZ REMARK 470 LYS B 242 CG CD CE NZ REMARK 470 LYS B 244 CG CD CE NZ REMARK 470 GLU B 245 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 238 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 135 -6.51 -53.65 REMARK 500 SER A 211 134.85 66.83 REMARK 500 SER A 214 7.42 -150.09 REMARK 500 SER A 234 -34.44 -35.95 REMARK 500 TYR B 76 -38.53 -134.88 REMARK 500 ASN B 161 -3.11 -152.12 REMARK 500 SER B 211 123.18 74.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 253 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UXD RELATED DB: PDB REMARK 900 DESIGNED PROTEIN KE59 R1 7/10H WITH DICHLOROBENZOTRIAZOLE (DBT) REMARK 900 RELATED ID: 3UY7 RELATED DB: PDB REMARK 900 DESIGNED PROTEIN KE59 R1 7/10H WITH G130S MUTATION REMARK 900 RELATED ID: 3UY8 RELATED DB: PDB REMARK 900 DESIGNED PROTEIN KE59 R5_11/5F REMARK 900 RELATED ID: 3UYC RELATED DB: PDB REMARK 900 DESIGNED PROTEIN KE59 R8_2/7A REMARK 900 RELATED ID: 3UZ5 RELATED DB: PDB REMARK 900 DESIGNED PROTEIN KE59 R13 3/11H REMARK 900 RELATED ID: 3UZJ RELATED DB: PDB REMARK 900 DESIGNED PROTEIN KE59 R13 3/11H WITH BENZOTRIAZOLE DBREF 3UXA A 1 252 PDB 3UXA 3UXA 1 252 DBREF 3UXA B 1 252 PDB 3UXA 3UXA 1 252 SEQRES 1 A 252 MET PRO ARG TYR LEU LYS GLY ALA LEU LYS ASP VAL VAL SEQRES 2 A 252 GLN LEU SER LEU ARG ARG PRO SER LEU ARG ALA SER ARG SEQRES 3 A 252 GLN ARG PRO ILE ILE SER LEU ARG GLU ARG ILE LEU GLU SEQRES 4 A 252 PHE ASN LYS ARG ASN ILE THR ALA ILE ILE ALA VAL TYR SEQRES 5 A 252 LYS ARG LYS SER PRO SER GLY LEU ASP VAL GLU ARG ASP SEQRES 6 A 252 PRO ILE GLU TYR ALA LYS PHE MET GLU ARG TYR ALA VAL SEQRES 7 A 252 GLY LEU VAL ILE LEU THR GLU GLU LYS TYR PHE ASN GLY SEQRES 8 A 252 SER TYR GLU ASP LEU ARG LYS ILE ALA SER SER VAL SER SEQRES 9 A 252 ILE PRO ILE LEU MET TRP ASP PHE ILE VAL LYS GLU SER SEQRES 10 A 252 GLN ILE ASP ASP ALA TYR ASN LEU GLY ALA ASP THR VAL SEQRES 11 A 252 GLY LEU ILE VAL LYS ILE LEU THR GLU ARG GLU LEU GLU SEQRES 12 A 252 SER LEU LEU GLU TYR ALA ARG SER TYR GLY MET GLU PRO SEQRES 13 A 252 ALA ILE VAL ILE ASN ASP GLU GLU ASP LEU ASP ILE ALA SEQRES 14 A 252 LEU ARG ILE GLY ALA ARG ILE ILE ILE ILE SER SER ARG SEQRES 15 A 252 ASP LEU GLU THR LEU GLU ILE ASN LYS GLU ASN GLN ARG SEQRES 16 A 252 LYS LEU ILE SER MET ILE PRO SER ASN VAL VAL LYS VAL SEQRES 17 A 252 ALA ALA SER GLY ILE SER GLU ARG ASN GLU ILE GLU GLU SEQRES 18 A 252 LEU ARG LYS LEU GLY VAL ASN ALA PHE GLU ILE GLY SER SEQRES 19 A 252 SER LEU MET ARG ASN PRO GLU LYS ILE LYS GLU LEU ILE SEQRES 20 A 252 LEU GLY SER LEU GLU SEQRES 1 B 252 MET PRO ARG TYR LEU LYS GLY ALA LEU LYS ASP VAL VAL SEQRES 2 B 252 GLN LEU SER LEU ARG ARG PRO SER LEU ARG ALA SER ARG SEQRES 3 B 252 GLN ARG PRO ILE ILE SER LEU ARG GLU ARG ILE LEU GLU SEQRES 4 B 252 PHE ASN LYS ARG ASN ILE THR ALA ILE ILE ALA VAL TYR SEQRES 5 B 252 LYS ARG LYS SER PRO SER GLY LEU ASP VAL GLU ARG ASP SEQRES 6 B 252 PRO ILE GLU TYR ALA LYS PHE MET GLU ARG TYR ALA VAL SEQRES 7 B 252 GLY LEU VAL ILE LEU THR GLU GLU LYS TYR PHE ASN GLY SEQRES 8 B 252 SER TYR GLU ASP LEU ARG LYS ILE ALA SER SER VAL SER SEQRES 9 B 252 ILE PRO ILE LEU MET TRP ASP PHE ILE VAL LYS GLU SER SEQRES 10 B 252 GLN ILE ASP ASP ALA TYR ASN LEU GLY ALA ASP THR VAL SEQRES 11 B 252 GLY LEU ILE VAL LYS ILE LEU THR GLU ARG GLU LEU GLU SEQRES 12 B 252 SER LEU LEU GLU TYR ALA ARG SER TYR GLY MET GLU PRO SEQRES 13 B 252 ALA ILE VAL ILE ASN ASP GLU GLU ASP LEU ASP ILE ALA SEQRES 14 B 252 LEU ARG ILE GLY ALA ARG ILE ILE ILE ILE SER SER ARG SEQRES 15 B 252 ASP LEU GLU THR LEU GLU ILE ASN LYS GLU ASN GLN ARG SEQRES 16 B 252 LYS LEU ILE SER MET ILE PRO SER ASN VAL VAL LYS VAL SEQRES 17 B 252 ALA ALA SER GLY ILE SER GLU ARG ASN GLU ILE GLU GLU SEQRES 18 B 252 LEU ARG LYS LEU GLY VAL ASN ALA PHE GLU ILE GLY SER SEQRES 19 B 252 SER LEU MET ARG ASN PRO GLU LYS ILE LYS GLU LEU ILE SEQRES 20 B 252 LEU GLY SER LEU GLU HET PO4 A 253 5 HET PO4 B 253 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 HOH *8(H2 O) HELIX 1 1 LYS A 6 ARG A 18 1 13 HELIX 2 2 SER A 32 ARG A 43 1 12 HELIX 3 3 ASP A 65 ARG A 75 1 11 HELIX 4 4 SER A 92 SER A 101 1 10 HELIX 5 5 LYS A 115 GLY A 126 1 12 HELIX 6 6 LYS A 135 LEU A 137 5 3 HELIX 7 7 THR A 138 TYR A 152 1 15 HELIX 8 8 ASP A 162 ILE A 172 1 11 HELIX 9 9 ASN A 190 MET A 200 1 11 HELIX 10 10 GLU A 215 LEU A 225 1 11 HELIX 11 11 GLY A 233 ASN A 239 1 7 HELIX 12 12 GLU A 241 ILE A 247 1 7 HELIX 13 13 LYS B 6 ARG B 18 1 13 HELIX 14 14 SER B 32 ARG B 43 1 12 HELIX 15 15 ASP B 65 GLU B 74 1 10 HELIX 16 16 SER B 92 VAL B 103 1 12 HELIX 17 17 LYS B 115 GLY B 126 1 12 HELIX 18 18 THR B 138 SER B 151 1 14 HELIX 19 19 ASP B 162 ILE B 172 1 11 HELIX 20 20 ASN B 190 MET B 200 1 11 HELIX 21 21 GLU B 215 LEU B 225 1 11 HELIX 22 22 GLY B 233 ASN B 239 1 7 HELIX 23 23 GLU B 241 ILE B 247 1 7 SHEET 1 A 9 ALA A 47 TYR A 52 0 SHEET 2 A 9 GLY A 79 LEU A 83 1 O VAL A 81 N TYR A 52 SHEET 3 A 9 ILE A 107 TRP A 110 1 O LEU A 108 N LEU A 80 SHEET 4 A 9 THR A 129 ILE A 133 1 O THR A 129 N MET A 109 SHEET 5 A 9 ALA A 157 ILE A 160 1 O ALA A 157 N LEU A 132 SHEET 6 A 9 ILE A 176 SER A 180 1 O ILE A 178 N ILE A 160 SHEET 7 A 9 VAL A 206 ALA A 210 1 O ALA A 210 N ILE A 179 SHEET 8 A 9 ALA A 229 ILE A 232 1 O GLU A 231 N ALA A 209 SHEET 9 A 9 ALA A 47 TYR A 52 1 N ILE A 49 O PHE A 230 SHEET 1 B 9 ILE B 48 TYR B 52 0 SHEET 2 B 9 GLY B 79 LEU B 83 1 O VAL B 81 N TYR B 52 SHEET 3 B 9 ILE B 107 TRP B 110 1 O LEU B 108 N LEU B 80 SHEET 4 B 9 THR B 129 ILE B 133 1 O THR B 129 N MET B 109 SHEET 5 B 9 ALA B 157 ILE B 160 1 O VAL B 159 N LEU B 132 SHEET 6 B 9 ILE B 176 SER B 180 1 O ILE B 178 N ILE B 158 SHEET 7 B 9 VAL B 206 ALA B 210 1 O VAL B 206 N ILE B 177 SHEET 8 B 9 ALA B 229 ILE B 232 1 O GLU B 231 N ALA B 209 SHEET 9 B 9 ILE B 48 TYR B 52 1 N ILE B 49 O PHE B 230 SITE 1 AC1 7 LYS A 53 ARG A 182 SER A 211 GLY A 212 SITE 2 AC1 7 ILE A 232 GLY A 233 SER A 234 SITE 1 AC2 6 LYS B 53 ARG B 182 GLY B 212 ILE B 232 SITE 2 AC2 6 GLY B 233 SER B 234 CRYST1 61.860 61.860 119.435 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016166 0.009333 0.000000 0.00000 SCALE2 0.000000 0.018666 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008373 0.00000