PDB Short entry for 3V3Q
HEADER    TRANSCRIPTION/ANTAGONIST                14-DEC-11   3V3Q              
TITLE     CRYSTAL STRUCTURE OF HUMAN NUR77 LIGAND-BINDING DOMAIN IN COMPLEX WITH
TITLE    2 ETHYL 2-[2,3,4 TRIMETHOXY-6(1-OCTANOYL)PHENYL]ACETATE                
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: NUCLEAR RECEPTOR SUBFAMILY 4 GROUP A MEMBER 1;             
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 FRAGMENT: LIGAND-BINGDING DOMAIN, UNP RESIDUES 351-598;              
COMPND   5 SYNONYM: EARLY RESPONSE PROTEIN NAK1, NUCLEAR HORMONE RECEPTOR       
COMPND   6 NUR/77, NUR77, ORPHAN NUCLEAR RECEPTOR HMR, ORPHAN NUCLEAR RECEPTOR  
COMPND   7 TR3, ST-59, TESTICULAR RECEPTOR 3;                                   
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: NR4A1, GFRP1, HMR, NAK1;                                       
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET22B                                    
KEYWDS    ORPHAN NUCLEAR RECEPTOR, PROTEIN-ANTAGONIST COMPLEX, TRANSCRIPTION,   
KEYWDS   2 TRANSCRIPTION-ANTAGONIST COMPLEX                                     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Q.ZHANG,C.SHI,K.YANG,Y.CHEN,Y.ZHAN,Q.WU,T.LIN                         
REVDAT   2   10-JUL-13 3V3Q    1       JRNL                                     
REVDAT   1   26-SEP-12 3V3Q    0                                                
JRNL        AUTH   Y.ZHAN,Y.CHEN,Q.ZHANG,J.ZHUANG,M.TIAN,H.CHEN,L.ZHANG,        
JRNL        AUTH 2 H.ZHANG,J.HE,W.WANG,R.WU,Y.WANG,C.SHI,K.YANG,A.LI,Y.XIN,     
JRNL        AUTH 3 T.Y.LI,J.Y.YANG,Z.ZHENG,C.YU,S.LIN,C.CHANG,P.HUANG,T.LIN,    
JRNL        AUTH 4 Q.WU                                                         
JRNL        TITL   THE ORPHAN NUCLEAR RECEPTOR NUR77 REGULATES LKB1             
JRNL        TITL 2 LOCALIZATION AND ACTIVATES AMPK                              
JRNL        REF    NAT.CHEM.BIOL.                V.   8   897 2012              
JRNL        REFN                   ISSN 1552-4450                               
JRNL        PMID   22983157                                                     
JRNL        DOI    10.1038/NCHEMBIO.1069                                        
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.22 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.6.0117                                      
REMARK   3   AUTHORS     : MURSHUDOV,VAGIN,DODSON                               
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 48.73                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 93.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 33113                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.213                           
REMARK   3   R VALUE            (WORKING SET) : 0.209                           
REMARK   3   FREE R VALUE                     : 0.286                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1752                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.22                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.28                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 2350                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 97.67                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2590                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 119                          
REMARK   3   BIN FREE R VALUE                    : 0.3350                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3733                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 79                                      
REMARK   3   SOLVENT ATOMS            : 397                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 35.76                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 0.00000                                              
REMARK   3    B22 (A**2) : 0.02000                                              
REMARK   3    B33 (A**2) : -0.01000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.249         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.237         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.172         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.817         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.932                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.874                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  3926 ; 0.016 ; 0.019       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  5311 ; 1.937 ; 2.015       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   480 ; 6.480 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   165 ;38.739 ;23.455       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   675 ;19.847 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    29 ;22.443 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   605 ; 0.125 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  2903 ; 0.009 ; 0.021       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS:                                           
REMARK   3  HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT                    
REMARK   3  U VALUES: REFINED INDIVIDUALLY                                      
REMARK   4                                                                      
REMARK   4 3V3Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JAN-12.                  
REMARK 100 THE RCSB ID CODE IS RCSB069556.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 11-AUG-11                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 4.8                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU MICROMAX-007 HF             
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : MAR SCANNER 345 MM PLATE           
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : AUTOMAR                            
REMARK 200  DATA SCALING SOFTWARE          : AUTOMAR                            
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 34891                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.220                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 48.730                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 93.6                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : 0.07000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 93.6                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: PDB ENTRY 3V3E                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 61.59                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 7% PEG 6000, PH 4.8, VAPOR DIFFUSION,    
REMARK 280  HANGING DROP, TEMPERATURE 289K                                      
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       37.12100            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       64.59650            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       38.38650            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       64.59650            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       37.12100            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       38.38650            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 2430 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 22830 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A    19                                                      
REMARK 465     SER A    20                                                      
REMARK 465     LYS A    21                                                      
REMARK 465     PRO A    22                                                      
REMARK 465     LYS A    23                                                      
REMARK 465     GLN A    24                                                      
REMARK 465     PRO A    25                                                      
REMARK 465     PRO A    26                                                      
REMARK 465     SER A    29                                                      
REMARK 465     GLY A   213                                                      
REMARK 465     GLU A   214                                                      
REMARK 465     PRO A   215                                                      
REMARK 465     GLN A   216                                                      
REMARK 465     GLU A   269                                                      
REMARK 465     HIS A   270                                                      
REMARK 465     HIS A   271                                                      
REMARK 465     HIS A   272                                                      
REMARK 465     HIS A   273                                                      
REMARK 465     HIS A   274                                                      
REMARK 465     HIS A   275                                                      
REMARK 465     MET B    19                                                      
REMARK 465     SER B    20                                                      
REMARK 465     LYS B    21                                                      
REMARK 465     PRO B    22                                                      
REMARK 465     LYS B    23                                                      
REMARK 465     GLN B    24                                                      
REMARK 465     PRO B    25                                                      
REMARK 465     PRO B    26                                                      
REMARK 465     ASP B    27                                                      
REMARK 465     ALA B    28                                                      
REMARK 465     SER B    29                                                      
REMARK 465     LEU B   268                                                      
REMARK 465     HIS B   270                                                      
REMARK 465     HIS B   271                                                      
REMARK 465     HIS B   272                                                      
REMARK 465     HIS B   273                                                      
REMARK 465     HIS B   274                                                      
REMARK 465     HIS B   275                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   NH2  ARG B   191     OE1  GLU B   194              1.86            
REMARK 500   O    HOH A   422     O    HOH A   431              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    HIS A 207   CG    HIS A 207   CD2     0.064                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    LEU A  59   CB  -  CG  -  CD2 ANGL. DEV. =  10.5 DEGREES          
REMARK 500    ARG A 141   NE  -  CZ  -  NH1 ANGL. DEV. =   4.1 DEGREES          
REMARK 500    ARG A 141   NE  -  CZ  -  NH2 ANGL. DEV. =  -4.2 DEGREES          
REMARK 500    ARG B 232   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.9 DEGREES          
REMARK 500    CYS B 235   CA  -  CB  -  SG  ANGL. DEV. =   7.9 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    GLU A  67      144.74   -170.45                                   
REMARK 500    VAL A 211       63.66   -105.07                                   
REMARK 500    SER B  54       -6.96    -56.31                                   
REMARK 500    LEU B  61     -174.13     70.44                                   
REMARK 500    HIS B  63     -162.99   -162.53                                   
REMARK 500    PRO B 215      -86.18    -24.12                                   
REMARK 500    GLN B 216       29.48     42.89                                   
REMARK 500    PRO B 266       26.14    -70.21                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CHIRAL CENTERS                                             
REMARK 500                                                                      
REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL                     
REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY                      
REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR                        
REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE                                    
REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN                            
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE                   
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16)       
REMARK 500                                                                      
REMARK 500  M RES CSSEQI    IMPROPER   EXPECTED   FOUND DETAILS                 
REMARK 500    ASN A  32        22.0      L          L   OUTSIDE RANGE           
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A 468        DISTANCE =  5.66 ANGSTROMS                       
REMARK 525    HOH A 510        DISTANCE =  5.34 ANGSTROMS                       
REMARK 525    HOH A 517        DISTANCE =  5.50 ANGSTROMS                       
REMARK 525    HOH B 456        DISTANCE =  5.11 ANGSTROMS                       
REMARK 525    HOH B 478        DISTANCE =  7.16 ANGSTROMS                       
REMARK 525    HOH B 515        DISTANCE =  5.15 ANGSTROMS                       
REMARK 525    HOH B 526        DISTANCE =  6.21 ANGSTROMS                       
REMARK 525    HOH B 564        DISTANCE =  6.05 ANGSTROMS                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TMY A 301                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TMY A 302                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 303                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 304                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 305                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 301                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 302                  
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3V3E   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE HUMAN NUR77 LIGAND-BINDING DOMAIN           
DBREF  3V3Q A   20   267  UNP    P22736   NR4A1_HUMAN    351    598             
DBREF  3V3Q B   20   267  UNP    P22736   NR4A1_HUMAN    351    598             
SEQADV 3V3Q MET A   19  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q LEU A  268  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q GLU A  269  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS A  270  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS A  271  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS A  272  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS A  273  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS A  274  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS A  275  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q MET B   19  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q LEU B  268  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q GLU B  269  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS B  270  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS B  271  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS B  272  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS B  273  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS B  274  UNP  P22736              EXPRESSION TAG                 
SEQADV 3V3Q HIS B  275  UNP  P22736              EXPRESSION TAG                 
SEQRES   1 A  257  MET SER LYS PRO LYS GLN PRO PRO ASP ALA SER PRO ALA          
SEQRES   2 A  257  ASN LEU LEU THR SER LEU VAL ARG ALA HIS LEU ASP SER          
SEQRES   3 A  257  GLY PRO SER THR ALA LYS LEU ASP TYR SER LYS PHE GLN          
SEQRES   4 A  257  GLU LEU VAL LEU PRO HIS PHE GLY LYS GLU ASP ALA GLY          
SEQRES   5 A  257  ASP VAL GLN GLN PHE TYR ASP LEU LEU SER GLY SER LEU          
SEQRES   6 A  257  GLU VAL ILE ARG LYS TRP ALA GLU LYS ILE PRO GLY PHE          
SEQRES   7 A  257  ALA GLU LEU SER PRO ALA ASP GLN ASP LEU LEU LEU GLU          
SEQRES   8 A  257  SER ALA PHE LEU GLU LEU PHE ILE LEU ARG LEU ALA TYR          
SEQRES   9 A  257  ARG SER LYS PRO GLY GLU GLY LYS LEU ILE PHE CYS SER          
SEQRES  10 A  257  GLY LEU VAL LEU HIS ARG LEU GLN CYS ALA ARG GLY PHE          
SEQRES  11 A  257  GLY ASP TRP ILE ASP SER ILE LEU ALA PHE SER ARG SER          
SEQRES  12 A  257  LEU HIS SER LEU LEU VAL ASP VAL PRO ALA PHE ALA CYS          
SEQRES  13 A  257  LEU SER ALA LEU VAL LEU ILE THR ASP ARG HIS GLY LEU          
SEQRES  14 A  257  GLN GLU PRO ARG ARG VAL GLU GLU LEU GLN ASN ARG ILE          
SEQRES  15 A  257  ALA SER CYS LEU LYS GLU HIS VAL ALA ALA VAL ALA GLY          
SEQRES  16 A  257  GLU PRO GLN PRO ALA SER CYS LEU SER ARG LEU LEU GLY          
SEQRES  17 A  257  LYS LEU PRO GLU LEU ARG THR LEU CYS THR GLN GLY LEU          
SEQRES  18 A  257  GLN ARG ILE PHE TYR LEU LYS LEU GLU ASP LEU VAL PRO          
SEQRES  19 A  257  PRO PRO PRO ILE ILE ASP LYS ILE PHE MET ASP THR LEU          
SEQRES  20 A  257  PRO PHE LEU GLU HIS HIS HIS HIS HIS HIS                      
SEQRES   1 B  257  MET SER LYS PRO LYS GLN PRO PRO ASP ALA SER PRO ALA          
SEQRES   2 B  257  ASN LEU LEU THR SER LEU VAL ARG ALA HIS LEU ASP SER          
SEQRES   3 B  257  GLY PRO SER THR ALA LYS LEU ASP TYR SER LYS PHE GLN          
SEQRES   4 B  257  GLU LEU VAL LEU PRO HIS PHE GLY LYS GLU ASP ALA GLY          
SEQRES   5 B  257  ASP VAL GLN GLN PHE TYR ASP LEU LEU SER GLY SER LEU          
SEQRES   6 B  257  GLU VAL ILE ARG LYS TRP ALA GLU LYS ILE PRO GLY PHE          
SEQRES   7 B  257  ALA GLU LEU SER PRO ALA ASP GLN ASP LEU LEU LEU GLU          
SEQRES   8 B  257  SER ALA PHE LEU GLU LEU PHE ILE LEU ARG LEU ALA TYR          
SEQRES   9 B  257  ARG SER LYS PRO GLY GLU GLY LYS LEU ILE PHE CYS SER          
SEQRES  10 B  257  GLY LEU VAL LEU HIS ARG LEU GLN CYS ALA ARG GLY PHE          
SEQRES  11 B  257  GLY ASP TRP ILE ASP SER ILE LEU ALA PHE SER ARG SER          
SEQRES  12 B  257  LEU HIS SER LEU LEU VAL ASP VAL PRO ALA PHE ALA CYS          
SEQRES  13 B  257  LEU SER ALA LEU VAL LEU ILE THR ASP ARG HIS GLY LEU          
SEQRES  14 B  257  GLN GLU PRO ARG ARG VAL GLU GLU LEU GLN ASN ARG ILE          
SEQRES  15 B  257  ALA SER CYS LEU LYS GLU HIS VAL ALA ALA VAL ALA GLY          
SEQRES  16 B  257  GLU PRO GLN PRO ALA SER CYS LEU SER ARG LEU LEU GLY          
SEQRES  17 B  257  LYS LEU PRO GLU LEU ARG THR LEU CYS THR GLN GLY LEU          
SEQRES  18 B  257  GLN ARG ILE PHE TYR LEU LYS LEU GLU ASP LEU VAL PRO          
SEQRES  19 B  257  PRO PRO PRO ILE ILE ASP LYS ILE PHE MET ASP THR LEU          
SEQRES  20 B  257  PRO PHE LEU GLU HIS HIS HIS HIS HIS HIS                      
HET    TMY  A 301      27                                                       
HET    TMY  A 302      27                                                       
HET    GOL  A 303       6                                                       
HET    GOL  A 304       6                                                       
HET    GOL  A 305       6                                                       
HET    GOL  B 301       6                                                       
HET     NA  B 302       1                                                       
HETNAM     TMY ETHYL (2,3,4-TRIMETHOXY-6-OCTANOYLPHENYL)ACETATE                 
HETNAM     GOL GLYCEROL                                                         
HETNAM      NA SODIUM ION                                                       
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   3  TMY    2(C21 H32 O6)                                                
FORMUL   5  GOL    4(C3 H8 O3)                                                  
FORMUL   9   NA    NA 1+                                                        
FORMUL  10  HOH   *397(H2 O)                                                    
HELIX    1   1 ALA A   31  ASP A   43  1                                  13    
HELIX    2   2 SER A   47  LEU A   51  5                                   5    
HELIX    3   3 ASP A   68  LYS A   92  1                                  25    
HELIX    4   4 GLY A   95  LEU A   99  5                                   5    
HELIX    5   5 SER A  100  SER A  124  1                                  25    
HELIX    6   6 LYS A  125  GLU A  128  5                                   4    
HELIX    7   7 ARG A  141  GLY A  149  1                                   9    
HELIX    8   8 GLY A  149  SER A  164  1                                  16    
HELIX    9   9 ASP A  168  ILE A  181  1                                  14    
HELIX   10  10 GLU A  189  VAL A  211  1                                  23    
HELIX   11  11 SER A  219  GLY A  226  1                                   8    
HELIX   12  12 LYS A  227  ASP A  249  1                                  23    
HELIX   13  13 PRO A  254  LEU A  265  1                                  12    
HELIX   14  14 ALA B   31  SER B   44  1                                  14    
HELIX   15  15 SER B   47  LEU B   51  5                                   5    
HELIX   16  16 ASP B   68  LYS B   92  1                                  25    
HELIX   17  17 GLY B   95  LEU B   99  5                                   5    
HELIX   18  18 SER B  100  SER B  124  1                                  25    
HELIX   19  19 LYS B  125  GLU B  128  5                                   4    
HELIX   20  20 ARG B  141  GLY B  149  1                                   9    
HELIX   21  21 ASP B  150  LEU B  166  1                                  17    
HELIX   22  22 ASP B  168  ILE B  181  1                                  14    
HELIX   23  23 GLU B  189  VAL B  211  1                                  23    
HELIX   24  24 ALA B  218  GLY B  226  1                                   9    
HELIX   25  25 GLY B  226  ASP B  249  1                                  24    
HELIX   26  26 PRO B  254  LEU B  265  1                                  12    
SHEET    1   A 2 LYS A 130  ILE A 132  0                                        
SHEET    2   A 2 VAL A 138  HIS A 140 -1  O  LEU A 139   N  LEU A 131           
SHEET    1   B 2 LYS B 130  ILE B 132  0                                        
SHEET    2   B 2 VAL B 138  HIS B 140 -1  O  LEU B 139   N  LEU B 131           
LINK         OG  SER B  82                NA    NA B 302     1555   1555  2.77  
CISPEP   1 ASP A   27    ALA A   28          0         2.55                     
CISPEP   2 PRO B   30    ALA B   31          0       -16.54                     
CISPEP   3 LEU B   61    PRO B   62          0        -3.79                     
CISPEP   4 GLY B   65    LYS B   66          0        -2.15                     
CISPEP   5 GLY B  213    GLU B  214          0        -9.95                     
SITE     1 AC1 15 GLU A 109  SER A 110  ALA A 111  PHE A 112                    
SITE     2 AC1 15 LEU A 113  GLU A 114  ARG A 232  CYS A 235                    
SITE     3 AC1 15 THR A 236  LEU A 239  ILE A 260  THR A 264                    
SITE     4 AC1 15 HOH A 544  HOH A 547  HOH A 603                               
SITE     1 AC2 17 HIS A  41  LEU A  42  PRO A  46  TYR A 122                    
SITE     2 AC2 17 ARG A 123  LYS A 125  LEU A 162  HIS A 163                    
SITE     3 AC2 17 LEU A 166  VAL A 167  VAL A 169  GOL A 304                    
SITE     4 AC2 17 HOH A 438  HOH A 521  HOH A 575  HOH A 583                    
SITE     5 AC2 17 HOH A 599                                                     
SITE     1 AC3  3 LEU A 178  HOH A 591  HOH A 595                               
SITE     1 AC4  8 HIS A  41  SER A  44  GLY A  45  PRO A  46                    
SITE     2 AC4  8 ARG A 119  ARG A 123  TMY A 302  HOH A 583                    
SITE     1 AC5  6 GLY A  95  GLU A  98  ARG A 192  GLU A 195                    
SITE     2 AC5  6 GLU B 189  HOH B 517                                          
SITE     1 AC6  7 HIS B  41  GLY B  45  PRO B  46  ARG B 123                    
SITE     2 AC6  7 HOH B 574  HOH B 575  HOH B 578                               
SITE     1 AC7  4 SER B  82  ARG B 119  ARG B 123  CYS B 134                    
CRYST1   74.242   76.773  129.193  90.00  90.00  90.00 P 21 21 21    8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.013469  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.013025  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.007740        0.00000