PDB Short entry for 3W3J HEADER IMMUNE SYSTEM 22-DEC-12 3W3J TITLE CRYSTAL STRUCTURE OF HUMAN TLR8 IN COMPLEX WITH CL097 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 8; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 27-827; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TLR8, UNQ249/PRO286; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7215; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: S2 KEYWDS LEUCINE RICH REPEAT, RNA, GLYCOSYLATION, RNA RECOGNITION, SSRNA, KEYWDS 2 RECEPTOR, RNA RECEPTOR, INNATE IMMUNITY, RNA BINDING, SECRETED, KEYWDS 3 CL097, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR H.TANJI,U.OHTO,T.SHIMIZU REVDAT 2 29-JUL-20 3W3J 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 03-APR-13 3W3J 0 JRNL AUTH H.TANJI,U.OHTO,T.SHIBATA,K.MIYAKE,T.SHIMIZU JRNL TITL STRUCTURAL REORGANIZATION OF THE TOLL-LIKE RECEPTOR 8 DIMER JRNL TITL 2 INDUCED BY AGONISTIC LIGANDS JRNL REF SCIENCE V. 339 1426 2013 JRNL REFN ISSN 0036-8075 JRNL PMID 23520111 JRNL DOI 10.1126/SCIENCE.1229159 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 114600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 5748 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4394 - 6.2072 0.96 3626 200 0.2197 0.2442 REMARK 3 2 6.2072 - 4.9297 1.00 3745 187 0.1921 0.2130 REMARK 3 3 4.9297 - 4.3073 1.00 3738 179 0.1627 0.2032 REMARK 3 4 4.3073 - 3.9139 1.00 3713 198 0.1548 0.1903 REMARK 3 5 3.9139 - 3.6335 1.00 3714 209 0.1532 0.1929 REMARK 3 6 3.6335 - 3.4194 1.00 3716 190 0.1637 0.2065 REMARK 3 7 3.4194 - 3.2482 1.00 3712 190 0.1694 0.2178 REMARK 3 8 3.2482 - 3.1069 1.00 3687 205 0.1800 0.2471 REMARK 3 9 3.1069 - 2.9873 0.99 3666 208 0.1833 0.2394 REMARK 3 10 2.9873 - 2.8843 0.99 3672 196 0.1936 0.2343 REMARK 3 11 2.8843 - 2.7941 0.98 3616 210 0.1898 0.2417 REMARK 3 12 2.7941 - 2.7143 0.98 3612 210 0.1871 0.2552 REMARK 3 13 2.7143 - 2.6428 0.98 3593 193 0.1918 0.2726 REMARK 3 14 2.6428 - 2.5784 0.97 3570 202 0.1941 0.2359 REMARK 3 15 2.5784 - 2.5197 0.97 3582 198 0.1942 0.2524 REMARK 3 16 2.5197 - 2.4661 0.97 3581 207 0.1884 0.2484 REMARK 3 17 2.4661 - 2.4168 0.96 3563 208 0.1956 0.2680 REMARK 3 18 2.4168 - 2.3712 0.96 3580 167 0.2115 0.2577 REMARK 3 19 2.3712 - 2.3289 0.97 3555 176 0.2146 0.2774 REMARK 3 20 2.3289 - 2.2894 0.97 3592 175 0.2075 0.2451 REMARK 3 21 2.2894 - 2.2525 0.97 3613 176 0.2180 0.2892 REMARK 3 22 2.2525 - 2.2178 0.97 3586 187 0.2221 0.2687 REMARK 3 23 2.2178 - 2.1852 0.97 3610 167 0.2248 0.2835 REMARK 3 24 2.1852 - 2.1544 0.97 3561 205 0.2295 0.2627 REMARK 3 25 2.1544 - 2.1253 0.97 3573 183 0.2378 0.2930 REMARK 3 26 2.1253 - 2.0977 0.98 3616 176 0.2560 0.3306 REMARK 3 27 2.0977 - 2.0715 0.97 3636 190 0.2573 0.3108 REMARK 3 28 2.0715 - 2.0465 0.98 3561 199 0.2667 0.3187 REMARK 3 29 2.0465 - 2.0227 0.98 3658 179 0.2782 0.3440 REMARK 3 30 2.0227 - 2.0000 0.98 3605 178 0.2708 0.3183 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 12711 REMARK 3 ANGLE : 1.045 17263 REMARK 3 CHIRALITY : 0.067 2020 REMARK 3 PLANARITY : 0.004 2164 REMARK 3 DIHEDRAL : 19.298 4772 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 22.8308 4.7130 21.5116 REMARK 3 T TENSOR REMARK 3 T11: 0.1832 T22: 0.2242 REMARK 3 T33: 0.1964 T12: 0.0246 REMARK 3 T13: -0.0220 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 0.9625 L22: 0.4612 REMARK 3 L33: 0.5561 L12: 0.2740 REMARK 3 L13: -0.3533 L23: -0.1850 REMARK 3 S TENSOR REMARK 3 S11: 0.0069 S12: -0.2096 S13: 0.1235 REMARK 3 S21: 0.1039 S22: 0.0137 S23: 0.0958 REMARK 3 S31: -0.1138 S32: 0.0934 S33: -0.0213 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3W3J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000095840. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 114639 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 42.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14%(W/V) PEG3350, 0.2M POTASSIUM REMARK 280 FORMATE, 0.1M SODIUM CITRATE, PH 5.1, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 74.37500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER (CHAIN A,B) IN THE REMARK 300 ASSYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 58570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 23 REMARK 465 SER A 24 REMARK 465 PRO A 25 REMARK 465 TRP A 26 REMARK 465 GLU A 27 REMARK 465 GLU A 28 REMARK 465 ASN A 29 REMARK 465 PHE A 30 REMARK 465 ASN A 42 REMARK 465 ASP A 43 REMARK 465 SER A 44 REMARK 465 GLN A 101 REMARK 465 HIS A 102 REMARK 465 GLN A 103 REMARK 465 ASN A 104 REMARK 465 GLY A 105 REMARK 465 ASN A 106 REMARK 465 PRO A 107 REMARK 465 GLY A 108 REMARK 465 ILE A 109 REMARK 465 GLN A 110 REMARK 465 SER A 111 REMARK 465 ASN A 112 REMARK 465 LEU A 433 REMARK 465 VAL A 434 REMARK 465 LYS A 435 REMARK 465 ASP A 436 REMARK 465 THR A 437 REMARK 465 ARG A 438 REMARK 465 GLN A 439 REMARK 465 SER A 440 REMARK 465 TYR A 441 REMARK 465 ALA A 442 REMARK 465 ASN A 443 REMARK 465 SER A 444 REMARK 465 SER A 445 REMARK 465 SER A 446 REMARK 465 PHE A 447 REMARK 465 GLN A 448 REMARK 465 ARG A 449 REMARK 465 HIS A 450 REMARK 465 ILE A 451 REMARK 465 ARG A 452 REMARK 465 LYS A 453 REMARK 465 ARG A 454 REMARK 465 ARG A 455 REMARK 465 SER A 456 REMARK 465 THR A 457 REMARK 465 GLU A 818 REMARK 465 LEU A 819 REMARK 465 THR A 820 REMARK 465 THR A 821 REMARK 465 CYS A 822 REMARK 465 VAL A 823 REMARK 465 SER A 824 REMARK 465 ASP A 825 REMARK 465 VAL A 826 REMARK 465 THR A 827 REMARK 465 GLU A 828 REMARK 465 PHE A 829 REMARK 465 LEU A 830 REMARK 465 VAL A 831 REMARK 465 PRO A 832 REMARK 465 ARG A 833 REMARK 465 ARG B 23 REMARK 465 SER B 24 REMARK 465 PRO B 25 REMARK 465 TRP B 26 REMARK 465 GLU B 27 REMARK 465 GLU B 28 REMARK 465 ASN B 29 REMARK 465 PHE B 30 REMARK 465 ASN B 42 REMARK 465 ASP B 43 REMARK 465 SER B 44 REMARK 465 GLN B 101 REMARK 465 HIS B 102 REMARK 465 GLN B 103 REMARK 465 ASN B 104 REMARK 465 GLY B 105 REMARK 465 ASN B 106 REMARK 465 PRO B 107 REMARK 465 GLY B 108 REMARK 465 ILE B 109 REMARK 465 GLN B 110 REMARK 465 SER B 111 REMARK 465 ASN B 112 REMARK 465 LEU B 433 REMARK 465 VAL B 434 REMARK 465 LYS B 435 REMARK 465 ASP B 436 REMARK 465 THR B 437 REMARK 465 ARG B 438 REMARK 465 GLN B 439 REMARK 465 SER B 440 REMARK 465 TYR B 441 REMARK 465 ALA B 442 REMARK 465 ASN B 443 REMARK 465 SER B 444 REMARK 465 SER B 445 REMARK 465 SER B 446 REMARK 465 PHE B 447 REMARK 465 GLN B 448 REMARK 465 ARG B 449 REMARK 465 HIS B 450 REMARK 465 ILE B 451 REMARK 465 ARG B 452 REMARK 465 LYS B 453 REMARK 465 ARG B 454 REMARK 465 ARG B 455 REMARK 465 SER B 456 REMARK 465 THR B 457 REMARK 465 ASP B 458 REMARK 465 GLU B 818 REMARK 465 LEU B 819 REMARK 465 THR B 820 REMARK 465 THR B 821 REMARK 465 CYS B 822 REMARK 465 VAL B 823 REMARK 465 SER B 824 REMARK 465 ASP B 825 REMARK 465 VAL B 826 REMARK 465 THR B 827 REMARK 465 GLU B 828 REMARK 465 PHE B 829 REMARK 465 LEU B 830 REMARK 465 VAL B 831 REMARK 465 PRO B 832 REMARK 465 ARG B 833 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 31 OG REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 GLN A 41 CG CD OE1 NE2 REMARK 470 VAL A 100 CG1 CG2 REMARK 470 GLU A 757 CG CD OE1 OE2 REMARK 470 THR A 758 OG1 CG2 REMARK 470 LYS A 759 CG CD CE NZ REMARK 470 THR A 760 OG1 CG2 REMARK 470 THR A 761 OG1 CG2 REMARK 470 THR A 762 OG1 CG2 REMARK 470 LEU A 817 CG CD1 CD2 REMARK 470 SER B 31 OG REMARK 470 LYS B 40 CG CD CE NZ REMARK 470 GLN B 41 CG CD OE1 NE2 REMARK 470 GLU B 757 CG CD OE1 OE2 REMARK 470 THR B 758 OG1 CG2 REMARK 470 LYS B 759 CG CD CE NZ REMARK 470 THR B 760 OG1 CG2 REMARK 470 THR B 761 OG1 CG2 REMARK 470 THR B 762 OG1 CG2 REMARK 470 LEU B 817 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 386 O HOH B 1204 2.06 REMARK 500 O HOH B 1094 O HOH B 1204 2.10 REMARK 500 O3 SO4 A 1016 O HOH A 1538 2.11 REMARK 500 OD1 ASN A 503 O HOH A 1320 2.13 REMARK 500 O LYS B 677 O HOH B 1371 2.14 REMARK 500 OE2 GLU A 326 O HOH A 1461 2.15 REMARK 500 O HOH A 1248 O HOH A 1431 2.16 REMARK 500 O HOH A 1478 O HOH A 1538 2.17 REMARK 500 OE1 GLN A 288 O HOH A 1474 2.18 REMARK 500 O PHE B 702 O HOH B 1055 2.18 REMARK 500 O HOH A 1501 O HOH A 1508 2.18 REMARK 500 O LEU A 701 O HOH A 1308 2.19 REMARK 500 OD2 ASP B 487 O HOH B 1266 2.19 REMARK 500 OD2 ASP B 462 O6 MAN F 4 2.19 REMARK 500 O HOH A 1296 O HOH A 1341 2.19 REMARK 500 O HOH A 1371 O HOH A 1450 2.19 REMARK 500 O HOH B 1323 O HOH B 1360 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O3 NAG B 914 O HOH A 1474 1655 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 53 21.39 48.00 REMARK 500 ASN A 73 -152.80 -104.42 REMARK 500 PHE A 83 73.18 -119.36 REMARK 500 LEU A 132 55.30 -115.69 REMARK 500 PHE A 183 -128.66 54.69 REMARK 500 SER A 214 -16.53 61.19 REMARK 500 LEU A 286 53.68 -90.25 REMARK 500 ASN A 321 -162.43 -116.38 REMARK 500 TYR A 353 67.73 -150.04 REMARK 500 VAL A 378 110.33 76.29 REMARK 500 ASN A 419 63.06 -155.50 REMARK 500 GLU A 427 55.83 70.27 REMARK 500 ASN A 428 -150.69 -125.62 REMARK 500 ARG A 472 151.27 -48.97 REMARK 500 ASN A 491 -156.68 -115.60 REMARK 500 ASP A 506 86.22 -69.78 REMARK 500 ASN A 540 -156.62 -108.66 REMARK 500 ASP A 601 -58.46 68.23 REMARK 500 ASN A 618 -165.26 -116.40 REMARK 500 ASN A 674 -150.24 -110.88 REMARK 500 ASN A 698 -155.95 -124.78 REMARK 500 SER A 706 36.96 -142.32 REMARK 500 ASN A 722 -159.62 -123.77 REMARK 500 GLU A 734 -79.00 -57.72 REMARK 500 VAL A 735 -66.66 -5.33 REMARK 500 SER A 736 -31.78 46.71 REMARK 500 ASN A 746 -151.93 -112.03 REMARK 500 GLU A 757 -56.47 49.90 REMARK 500 THR A 777 -152.55 -129.35 REMARK 500 HIS A 790 77.14 -100.02 REMARK 500 TYR B 34 138.74 -173.43 REMARK 500 THR B 60 31.45 -82.12 REMARK 500 ASN B 73 -168.37 -109.67 REMARK 500 LEU B 86 63.57 -115.85 REMARK 500 ASN B 99 54.59 -64.17 REMARK 500 ASN B 156 -168.46 -123.82 REMARK 500 PHE B 183 -134.92 47.27 REMARK 500 SER B 214 -32.21 73.16 REMARK 500 PRO B 264 30.54 -85.43 REMARK 500 MET B 310 61.90 -117.93 REMARK 500 ASN B 321 -156.56 -112.12 REMARK 500 SER B 329 -71.23 -118.14 REMARK 500 VAL B 378 103.15 69.13 REMARK 500 ASN B 419 27.53 -157.25 REMARK 500 ASN B 428 -152.19 -126.65 REMARK 500 ASN B 491 -156.10 -121.19 REMARK 500 PRO B 505 -174.62 -69.47 REMARK 500 ASN B 540 -155.38 -114.87 REMARK 500 ASN B 564 53.66 -118.30 REMARK 500 ASP B 601 -59.61 64.15 REMARK 500 REMARK 500 THIS ENTRY HAS 61 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3W3G RELATED DB: PDB REMARK 900 RELATED ID: 3W3K RELATED DB: PDB REMARK 900 RELATED ID: 3W3L RELATED DB: PDB REMARK 900 RELATED ID: 3W3M RELATED DB: PDB REMARK 900 RELATED ID: 3W3N RELATED DB: PDB DBREF 3W3J A 27 827 UNP Q9NR97 TLR8_HUMAN 27 827 DBREF 3W3J B 27 827 UNP Q9NR97 TLR8_HUMAN 27 827 SEQADV 3W3J ARG A 23 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J SER A 24 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J PRO A 25 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J TRP A 26 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J GLU A 828 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J PHE A 829 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J LEU A 830 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J VAL A 831 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J PRO A 832 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J ARG A 833 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J ARG B 23 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J SER B 24 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J PRO B 25 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J TRP B 26 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J GLU B 828 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J PHE B 829 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J LEU B 830 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J VAL B 831 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J PRO B 832 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3J ARG B 833 UNP Q9NR97 EXPRESSION TAG SEQRES 1 A 811 ARG SER PRO TRP GLU GLU ASN PHE SER ARG SER TYR PRO SEQRES 2 A 811 CYS ASP GLU LYS LYS GLN ASN ASP SER VAL ILE ALA GLU SEQRES 3 A 811 CYS SER ASN ARG ARG LEU GLN GLU VAL PRO GLN THR VAL SEQRES 4 A 811 GLY LYS TYR VAL THR GLU LEU ASP LEU SER ASP ASN PHE SEQRES 5 A 811 ILE THR HIS ILE THR ASN GLU SER PHE GLN GLY LEU GLN SEQRES 6 A 811 ASN LEU THR LYS ILE ASN LEU ASN HIS ASN PRO ASN VAL SEQRES 7 A 811 GLN HIS GLN ASN GLY ASN PRO GLY ILE GLN SER ASN GLY SEQRES 8 A 811 LEU ASN ILE THR ASP GLY ALA PHE LEU ASN LEU LYS ASN SEQRES 9 A 811 LEU ARG GLU LEU LEU LEU GLU ASP ASN GLN LEU PRO GLN SEQRES 10 A 811 ILE PRO SER GLY LEU PRO GLU SER LEU THR GLU LEU SER SEQRES 11 A 811 LEU ILE GLN ASN ASN ILE TYR ASN ILE THR LYS GLU GLY SEQRES 12 A 811 ILE SER ARG LEU ILE ASN LEU LYS ASN LEU TYR LEU ALA SEQRES 13 A 811 TRP ASN CYS TYR PHE ASN LYS VAL CYS GLU LYS THR ASN SEQRES 14 A 811 ILE GLU ASP GLY VAL PHE GLU THR LEU THR ASN LEU GLU SEQRES 15 A 811 LEU LEU SER LEU SER PHE ASN SER LEU SER HIS VAL PRO SEQRES 16 A 811 PRO LYS LEU PRO SER SER LEU ARG LYS LEU PHE LEU SER SEQRES 17 A 811 ASN THR GLN ILE LYS TYR ILE SER GLU GLU ASP PHE LYS SEQRES 18 A 811 GLY LEU ILE ASN LEU THR LEU LEU ASP LEU SER GLY ASN SEQRES 19 A 811 CYS PRO ARG CYS PHE ASN ALA PRO PHE PRO CYS VAL PRO SEQRES 20 A 811 CYS ASP GLY GLY ALA SER ILE ASN ILE ASP ARG PHE ALA SEQRES 21 A 811 PHE GLN ASN LEU THR GLN LEU ARG TYR LEU ASN LEU SER SEQRES 22 A 811 SER THR SER LEU ARG LYS ILE ASN ALA ALA TRP PHE LYS SEQRES 23 A 811 ASN MET PRO HIS LEU LYS VAL LEU ASP LEU GLU PHE ASN SEQRES 24 A 811 TYR LEU VAL GLY GLU ILE ALA SER GLY ALA PHE LEU THR SEQRES 25 A 811 MET LEU PRO ARG LEU GLU ILE LEU ASP LEU SER PHE ASN SEQRES 26 A 811 TYR ILE LYS GLY SER TYR PRO GLN HIS ILE ASN ILE SER SEQRES 27 A 811 ARG ASN PHE SER LYS LEU LEU SER LEU ARG ALA LEU HIS SEQRES 28 A 811 LEU ARG GLY TYR VAL PHE GLN GLU LEU ARG GLU ASP ASP SEQRES 29 A 811 PHE GLN PRO LEU MET GLN LEU PRO ASN LEU SER THR ILE SEQRES 30 A 811 ASN LEU GLY ILE ASN PHE ILE LYS GLN ILE ASP PHE LYS SEQRES 31 A 811 LEU PHE GLN ASN PHE SER ASN LEU GLU ILE ILE TYR LEU SEQRES 32 A 811 SER GLU ASN ARG ILE SER PRO LEU VAL LYS ASP THR ARG SEQRES 33 A 811 GLN SER TYR ALA ASN SER SER SER PHE GLN ARG HIS ILE SEQRES 34 A 811 ARG LYS ARG ARG SER THR ASP PHE GLU PHE ASP PRO HIS SEQRES 35 A 811 SER ASN PHE TYR HIS PHE THR ARG PRO LEU ILE LYS PRO SEQRES 36 A 811 GLN CYS ALA ALA TYR GLY LYS ALA LEU ASP LEU SER LEU SEQRES 37 A 811 ASN SER ILE PHE PHE ILE GLY PRO ASN GLN PHE GLU ASN SEQRES 38 A 811 LEU PRO ASP ILE ALA CYS LEU ASN LEU SER ALA ASN SER SEQRES 39 A 811 ASN ALA GLN VAL LEU SER GLY THR GLU PHE SER ALA ILE SEQRES 40 A 811 PRO HIS VAL LYS TYR LEU ASP LEU THR ASN ASN ARG LEU SEQRES 41 A 811 ASP PHE ASP ASN ALA SER ALA LEU THR GLU LEU SER ASP SEQRES 42 A 811 LEU GLU VAL LEU ASP LEU SER TYR ASN SER HIS TYR PHE SEQRES 43 A 811 ARG ILE ALA GLY VAL THR HIS HIS LEU GLU PHE ILE GLN SEQRES 44 A 811 ASN PHE THR ASN LEU LYS VAL LEU ASN LEU SER HIS ASN SEQRES 45 A 811 ASN ILE TYR THR LEU THR ASP LYS TYR ASN LEU GLU SER SEQRES 46 A 811 LYS SER LEU VAL GLU LEU VAL PHE SER GLY ASN ARG LEU SEQRES 47 A 811 ASP ILE LEU TRP ASN ASP ASP ASP ASN ARG TYR ILE SER SEQRES 48 A 811 ILE PHE LYS GLY LEU LYS ASN LEU THR ARG LEU ASP LEU SEQRES 49 A 811 SER LEU ASN ARG LEU LYS HIS ILE PRO ASN GLU ALA PHE SEQRES 50 A 811 LEU ASN LEU PRO ALA SER LEU THR GLU LEU HIS ILE ASN SEQRES 51 A 811 ASP ASN MET LEU LYS PHE PHE ASN TRP THR LEU LEU GLN SEQRES 52 A 811 GLN PHE PRO ARG LEU GLU LEU LEU ASP LEU ARG GLY ASN SEQRES 53 A 811 LYS LEU LEU PHE LEU THR ASP SER LEU SER ASP PHE THR SEQRES 54 A 811 SER SER LEU ARG THR LEU LEU LEU SER HIS ASN ARG ILE SEQRES 55 A 811 SER HIS LEU PRO SER GLY PHE LEU SER GLU VAL SER SER SEQRES 56 A 811 LEU LYS HIS LEU ASP LEU SER SER ASN LEU LEU LYS THR SEQRES 57 A 811 ILE ASN LYS SER ALA LEU GLU THR LYS THR THR THR LYS SEQRES 58 A 811 LEU SER MET LEU GLU LEU HIS GLY ASN PRO PHE GLU CYS SEQRES 59 A 811 THR CYS ASP ILE GLY ASP PHE ARG ARG TRP MET ASP GLU SEQRES 60 A 811 HIS LEU ASN VAL LYS ILE PRO ARG LEU VAL ASP VAL ILE SEQRES 61 A 811 CYS ALA SER PRO GLY ASP GLN ARG GLY LYS SER ILE VAL SEQRES 62 A 811 SER LEU GLU LEU THR THR CYS VAL SER ASP VAL THR GLU SEQRES 63 A 811 PHE LEU VAL PRO ARG SEQRES 1 B 811 ARG SER PRO TRP GLU GLU ASN PHE SER ARG SER TYR PRO SEQRES 2 B 811 CYS ASP GLU LYS LYS GLN ASN ASP SER VAL ILE ALA GLU SEQRES 3 B 811 CYS SER ASN ARG ARG LEU GLN GLU VAL PRO GLN THR VAL SEQRES 4 B 811 GLY LYS TYR VAL THR GLU LEU ASP LEU SER ASP ASN PHE SEQRES 5 B 811 ILE THR HIS ILE THR ASN GLU SER PHE GLN GLY LEU GLN SEQRES 6 B 811 ASN LEU THR LYS ILE ASN LEU ASN HIS ASN PRO ASN VAL SEQRES 7 B 811 GLN HIS GLN ASN GLY ASN PRO GLY ILE GLN SER ASN GLY SEQRES 8 B 811 LEU ASN ILE THR ASP GLY ALA PHE LEU ASN LEU LYS ASN SEQRES 9 B 811 LEU ARG GLU LEU LEU LEU GLU ASP ASN GLN LEU PRO GLN SEQRES 10 B 811 ILE PRO SER GLY LEU PRO GLU SER LEU THR GLU LEU SER SEQRES 11 B 811 LEU ILE GLN ASN ASN ILE TYR ASN ILE THR LYS GLU GLY SEQRES 12 B 811 ILE SER ARG LEU ILE ASN LEU LYS ASN LEU TYR LEU ALA SEQRES 13 B 811 TRP ASN CYS TYR PHE ASN LYS VAL CYS GLU LYS THR ASN SEQRES 14 B 811 ILE GLU ASP GLY VAL PHE GLU THR LEU THR ASN LEU GLU SEQRES 15 B 811 LEU LEU SER LEU SER PHE ASN SER LEU SER HIS VAL PRO SEQRES 16 B 811 PRO LYS LEU PRO SER SER LEU ARG LYS LEU PHE LEU SER SEQRES 17 B 811 ASN THR GLN ILE LYS TYR ILE SER GLU GLU ASP PHE LYS SEQRES 18 B 811 GLY LEU ILE ASN LEU THR LEU LEU ASP LEU SER GLY ASN SEQRES 19 B 811 CYS PRO ARG CYS PHE ASN ALA PRO PHE PRO CYS VAL PRO SEQRES 20 B 811 CYS ASP GLY GLY ALA SER ILE ASN ILE ASP ARG PHE ALA SEQRES 21 B 811 PHE GLN ASN LEU THR GLN LEU ARG TYR LEU ASN LEU SER SEQRES 22 B 811 SER THR SER LEU ARG LYS ILE ASN ALA ALA TRP PHE LYS SEQRES 23 B 811 ASN MET PRO HIS LEU LYS VAL LEU ASP LEU GLU PHE ASN SEQRES 24 B 811 TYR LEU VAL GLY GLU ILE ALA SER GLY ALA PHE LEU THR SEQRES 25 B 811 MET LEU PRO ARG LEU GLU ILE LEU ASP LEU SER PHE ASN SEQRES 26 B 811 TYR ILE LYS GLY SER TYR PRO GLN HIS ILE ASN ILE SER SEQRES 27 B 811 ARG ASN PHE SER LYS LEU LEU SER LEU ARG ALA LEU HIS SEQRES 28 B 811 LEU ARG GLY TYR VAL PHE GLN GLU LEU ARG GLU ASP ASP SEQRES 29 B 811 PHE GLN PRO LEU MET GLN LEU PRO ASN LEU SER THR ILE SEQRES 30 B 811 ASN LEU GLY ILE ASN PHE ILE LYS GLN ILE ASP PHE LYS SEQRES 31 B 811 LEU PHE GLN ASN PHE SER ASN LEU GLU ILE ILE TYR LEU SEQRES 32 B 811 SER GLU ASN ARG ILE SER PRO LEU VAL LYS ASP THR ARG SEQRES 33 B 811 GLN SER TYR ALA ASN SER SER SER PHE GLN ARG HIS ILE SEQRES 34 B 811 ARG LYS ARG ARG SER THR ASP PHE GLU PHE ASP PRO HIS SEQRES 35 B 811 SER ASN PHE TYR HIS PHE THR ARG PRO LEU ILE LYS PRO SEQRES 36 B 811 GLN CYS ALA ALA TYR GLY LYS ALA LEU ASP LEU SER LEU SEQRES 37 B 811 ASN SER ILE PHE PHE ILE GLY PRO ASN GLN PHE GLU ASN SEQRES 38 B 811 LEU PRO ASP ILE ALA CYS LEU ASN LEU SER ALA ASN SER SEQRES 39 B 811 ASN ALA GLN VAL LEU SER GLY THR GLU PHE SER ALA ILE SEQRES 40 B 811 PRO HIS VAL LYS TYR LEU ASP LEU THR ASN ASN ARG LEU SEQRES 41 B 811 ASP PHE ASP ASN ALA SER ALA LEU THR GLU LEU SER ASP SEQRES 42 B 811 LEU GLU VAL LEU ASP LEU SER TYR ASN SER HIS TYR PHE SEQRES 43 B 811 ARG ILE ALA GLY VAL THR HIS HIS LEU GLU PHE ILE GLN SEQRES 44 B 811 ASN PHE THR ASN LEU LYS VAL LEU ASN LEU SER HIS ASN SEQRES 45 B 811 ASN ILE TYR THR LEU THR ASP LYS TYR ASN LEU GLU SER SEQRES 46 B 811 LYS SER LEU VAL GLU LEU VAL PHE SER GLY ASN ARG LEU SEQRES 47 B 811 ASP ILE LEU TRP ASN ASP ASP ASP ASN ARG TYR ILE SER SEQRES 48 B 811 ILE PHE LYS GLY LEU LYS ASN LEU THR ARG LEU ASP LEU SEQRES 49 B 811 SER LEU ASN ARG LEU LYS HIS ILE PRO ASN GLU ALA PHE SEQRES 50 B 811 LEU ASN LEU PRO ALA SER LEU THR GLU LEU HIS ILE ASN SEQRES 51 B 811 ASP ASN MET LEU LYS PHE PHE ASN TRP THR LEU LEU GLN SEQRES 52 B 811 GLN PHE PRO ARG LEU GLU LEU LEU ASP LEU ARG GLY ASN SEQRES 53 B 811 LYS LEU LEU PHE LEU THR ASP SER LEU SER ASP PHE THR SEQRES 54 B 811 SER SER LEU ARG THR LEU LEU LEU SER HIS ASN ARG ILE SEQRES 55 B 811 SER HIS LEU PRO SER GLY PHE LEU SER GLU VAL SER SER SEQRES 56 B 811 LEU LYS HIS LEU ASP LEU SER SER ASN LEU LEU LYS THR SEQRES 57 B 811 ILE ASN LYS SER ALA LEU GLU THR LYS THR THR THR LYS SEQRES 58 B 811 LEU SER MET LEU GLU LEU HIS GLY ASN PRO PHE GLU CYS SEQRES 59 B 811 THR CYS ASP ILE GLY ASP PHE ARG ARG TRP MET ASP GLU SEQRES 60 B 811 HIS LEU ASN VAL LYS ILE PRO ARG LEU VAL ASP VAL ILE SEQRES 61 B 811 CYS ALA SER PRO GLY ASP GLN ARG GLY LYS SER ILE VAL SEQRES 62 B 811 SER LEU GLU LEU THR THR CYS VAL SER ASP VAL THR GLU SEQRES 63 B 811 PHE LEU VAL PRO ARG MODRES 3W3J ASN A 395 ASN GLYCOSYLATION SITE MODRES 3W3J ASN A 511 ASN GLYCOSYLATION SITE MODRES 3W3J ASN B 511 ASN GLYCOSYLATION SITE MODRES 3W3J ASN B 395 ASN GLYCOSYLATION SITE MODRES 3W3J ASN B 680 ASN GLYCOSYLATION SITE MODRES 3W3J ASN B 546 ASN GLYCOSYLATION SITE MODRES 3W3J ASN B 640 ASN GLYCOSYLATION SITE MODRES 3W3J ASN A 640 ASN GLYCOSYLATION SITE MODRES 3W3J ASN A 680 ASN GLYCOSYLATION SITE MODRES 3W3J ASN A 546 ASN GLYCOSYLATION SITE MODRES 3W3J ASN A 293 ASN GLYCOSYLATION SITE MODRES 3W3J ASN B 293 ASN GLYCOSYLATION SITE MODRES 3W3J ASN B 590 ASN GLYCOSYLATION SITE MODRES 3W3J ASN A 590 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET NAG A1007 14 HET NAG A1011 14 HET NAG A1012 14 HET NAG A1013 14 HET C09 A1014 18 HET SO4 A1015 5 HET SO4 A1016 5 HET SO4 A1017 5 HET SO4 A1018 5 HET SO4 A1019 5 HET SO4 A1020 5 HET SO4 A1021 5 HET SO4 A1022 5 HET C09 B 901 18 HET NAG B 908 14 HET NAG B 912 14 HET NAG B 913 14 HET NAG B 914 14 HET SO4 B 915 5 HET SO4 B 916 5 HET SO4 B 917 5 HET SO4 B 918 5 HET SO4 B 919 5 HET SO4 B 920 5 HET SO4 B 921 5 HET SO4 B 922 5 HET GOL B 923 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM C09 2-(ETHOXYMETHYL)-1H-IMIDAZO[4,5-C]QUINOLIN-4-AMINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN C09 CL097 HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAG 20(C8 H15 N O6) FORMUL 3 BMA 4(C6 H12 O6) FORMUL 3 MAN 2(C6 H12 O6) FORMUL 13 C09 2(C13 H14 N4 O) FORMUL 14 SO4 16(O4 S 2-) FORMUL 35 GOL C3 H8 O3 FORMUL 36 HOH *861(H2 O) HELIX 1 1 THR A 162 SER A 167 1 6 HELIX 2 2 CYS A 270 ALA A 274 5 5 HELIX 3 3 ASN A 303 LYS A 308 5 6 HELIX 4 4 LEU A 323 SER A 329 1 7 HELIX 5 5 ALA A 331 LEU A 336 5 6 HELIX 6 6 SER A 360 LEU A 366 5 7 HELIX 7 7 ARG A 383 MET A 391 5 9 HELIX 8 8 PHE A 411 PHE A 417 5 7 HELIX 9 9 LYS A 476 ALA A 481 1 6 HELIX 10 10 ASN A 564 ARG A 569 1 6 HELIX 11 11 LEU A 577 PHE A 583 5 7 HELIX 12 12 ARG A 619 TRP A 624 1 6 HELIX 13 13 PRO A 655 ASN A 661 1 7 HELIX 14 14 ASN A 680 PHE A 687 5 8 HELIX 15 15 SER A 706 PHE A 710 5 5 HELIX 16 16 PHE A 731 SER A 736 1 6 HELIX 17 17 ASN A 752 GLU A 757 1 6 HELIX 18 18 THR A 777 ASP A 779 5 3 HELIX 19 19 ILE A 780 HIS A 790 1 11 HELIX 20 20 ARG A 797 VAL A 801 5 5 HELIX 21 21 PRO A 806 ARG A 810 5 5 HELIX 22 22 CYS B 270 ALA B 274 5 5 HELIX 23 23 ASN B 303 LYS B 308 5 6 HELIX 24 24 LEU B 323 SER B 329 1 7 HELIX 25 25 GLY B 330 LEU B 336 5 7 HELIX 26 26 SER B 360 LEU B 366 5 7 HELIX 27 27 GLU B 384 MET B 391 5 8 HELIX 28 28 PHE B 411 PHE B 417 5 7 HELIX 29 29 LYS B 476 ALA B 481 1 6 HELIX 30 30 ASN B 564 ARG B 569 1 6 HELIX 31 31 LEU B 577 PHE B 583 5 7 HELIX 32 32 ARG B 619 TRP B 624 1 6 HELIX 33 33 PRO B 655 ASN B 661 1 7 HELIX 34 34 ASN B 680 PHE B 687 5 8 HELIX 35 35 SER B 706 PHE B 710 5 5 HELIX 36 36 GLY B 730 VAL B 735 1 6 HELIX 37 37 LYS B 753 GLU B 757 5 5 HELIX 38 38 THR B 777 ASP B 779 5 3 HELIX 39 39 ILE B 780 GLU B 789 1 10 HELIX 40 40 ARG B 797 VAL B 801 5 5 HELIX 41 41 SER B 813 LEU B 817 5 5 SHEET 1 A28 ASP A 37 LYS A 39 0 SHEET 2 A28 ILE A 46 GLU A 48 -1 O ILE A 46 N LYS A 39 SHEET 3 A28 GLU A 67 ASP A 69 1 O GLU A 67 N ALA A 47 SHEET 4 A28 LYS A 91 ASN A 93 1 O LYS A 91 N LEU A 68 SHEET 5 A28 GLU A 129 LEU A 131 1 O GLU A 129 N ILE A 92 SHEET 6 A28 GLU A 150 SER A 152 1 O GLU A 150 N LEU A 130 SHEET 7 A28 ASN A 174 TYR A 176 1 O TYR A 176 N LEU A 151 SHEET 8 A28 LEU A 205 SER A 207 1 O SER A 207 N LEU A 175 SHEET 9 A28 LYS A 226 PHE A 228 1 O PHE A 228 N LEU A 206 SHEET 10 A28 LEU A 250 ASP A 252 1 O ASP A 252 N LEU A 227 SHEET 11 A28 TYR A 291 ASN A 293 1 O ASN A 293 N LEU A 251 SHEET 12 A28 VAL A 315 ASP A 317 1 O ASP A 317 N LEU A 292 SHEET 13 A28 ILE A 341 ASP A 343 1 O ILE A 341 N LEU A 316 SHEET 14 A28 ALA A 371 HIS A 373 1 O HIS A 373 N LEU A 342 SHEET 15 A28 THR A 398 ASN A 400 1 O THR A 398 N LEU A 372 SHEET 16 A28 ILE A 422 TYR A 424 1 O TYR A 424 N ILE A 399 SHEET 17 A28 LYS A 484 ASP A 487 1 O ALA A 485 N ILE A 423 SHEET 18 A28 ILE A 507 ASN A 511 1 O CYS A 509 N LEU A 486 SHEET 19 A28 TYR A 534 ASP A 536 1 O ASP A 536 N LEU A 510 SHEET 20 A28 VAL A 558 ASP A 560 1 O VAL A 558 N LEU A 535 SHEET 21 A28 VAL A 588 ASN A 590 1 O VAL A 588 N LEU A 559 SHEET 22 A28 GLU A 612 VAL A 614 1 O GLU A 612 N LEU A 589 SHEET 23 A28 ARG A 643 ASP A 645 1 O ARG A 643 N LEU A 613 SHEET 24 A28 GLU A 668 HIS A 670 1 O HIS A 670 N LEU A 644 SHEET 25 A28 LEU A 692 ASP A 694 1 O ASP A 694 N LEU A 669 SHEET 26 A28 THR A 716 LEU A 718 1 O THR A 716 N LEU A 693 SHEET 27 A28 HIS A 740 ASP A 742 1 O ASP A 742 N LEU A 717 SHEET 28 A28 MET A 766 GLU A 768 1 O MET A 766 N LEU A 741 SHEET 1 B 2 HIS A 77 ILE A 78 0 SHEET 2 B 2 ASN A 115 ILE A 116 1 O ASN A 115 N ILE A 78 SHEET 1 C 2 ASN A 160 ILE A 161 0 SHEET 2 C 2 ASN A 191 ILE A 192 1 O ASN A 191 N ILE A 161 SHEET 1 D 2 TYR A 236 ILE A 237 0 SHEET 2 D 2 ASN A 277 ILE A 278 1 O ASN A 277 N ILE A 237 SHEET 1 E 2 GLU A 381 LEU A 382 0 SHEET 2 E 2 GLN A 408 ILE A 409 1 O GLN A 408 N LEU A 382 SHEET 1 F 2 GLU A 606 SER A 607 0 SHEET 2 F 2 GLY A 637 LEU A 638 1 O GLY A 637 N SER A 607 SHEET 1 G 2 PHE A 774 GLU A 775 0 SHEET 2 G 2 CYS A 803 SER A 805 1 O ALA A 804 N PHE A 774 SHEET 1 H28 ASP B 37 LYS B 39 0 SHEET 2 H28 ILE B 46 GLU B 48 -1 O GLU B 48 N ASP B 37 SHEET 3 H28 GLU B 67 ASP B 69 1 O GLU B 67 N ALA B 47 SHEET 4 H28 LYS B 91 ASN B 93 1 O LYS B 91 N LEU B 68 SHEET 5 H28 GLU B 129 LEU B 131 1 O GLU B 129 N ILE B 92 SHEET 6 H28 GLU B 150 SER B 152 1 O GLU B 150 N LEU B 130 SHEET 7 H28 ASN B 174 TYR B 176 1 O TYR B 176 N LEU B 151 SHEET 8 H28 LEU B 205 SER B 207 1 O LEU B 205 N LEU B 175 SHEET 9 H28 LYS B 226 PHE B 228 1 O PHE B 228 N LEU B 206 SHEET 10 H28 LEU B 250 ASP B 252 1 O ASP B 252 N LEU B 227 SHEET 11 H28 TYR B 291 ASN B 293 1 O ASN B 293 N LEU B 251 SHEET 12 H28 VAL B 315 ASP B 317 1 O ASP B 317 N LEU B 292 SHEET 13 H28 ILE B 341 ASP B 343 1 O ILE B 341 N LEU B 316 SHEET 14 H28 ALA B 371 HIS B 373 1 O HIS B 373 N LEU B 342 SHEET 15 H28 THR B 398 ASN B 400 1 O ASN B 400 N LEU B 372 SHEET 16 H28 ILE B 422 TYR B 424 1 O TYR B 424 N ILE B 399 SHEET 17 H28 LYS B 484 ASP B 487 1 O ALA B 485 N ILE B 423 SHEET 18 H28 ILE B 507 ASN B 511 1 O ALA B 508 N LYS B 484 SHEET 19 H28 TYR B 534 ASP B 536 1 O TYR B 534 N LEU B 510 SHEET 20 H28 VAL B 558 ASP B 560 1 O ASP B 560 N LEU B 535 SHEET 21 H28 VAL B 588 ASN B 590 1 O VAL B 588 N LEU B 559 SHEET 22 H28 GLU B 612 VAL B 614 1 O VAL B 614 N LEU B 589 SHEET 23 H28 ARG B 643 ASP B 645 1 O ARG B 643 N LEU B 613 SHEET 24 H28 GLU B 668 HIS B 670 1 O HIS B 670 N LEU B 644 SHEET 25 H28 LEU B 692 ASP B 694 1 O ASP B 694 N LEU B 669 SHEET 26 H28 THR B 716 LEU B 718 1 O LEU B 718 N LEU B 693 SHEET 27 H28 HIS B 740 ASP B 742 1 O ASP B 742 N LEU B 717 SHEET 28 H28 MET B 766 GLU B 768 1 O MET B 766 N LEU B 741 SHEET 1 I 2 HIS B 77 ILE B 78 0 SHEET 2 I 2 ASN B 115 ILE B 116 1 O ASN B 115 N ILE B 78 SHEET 1 J 2 ASN B 160 ILE B 161 0 SHEET 2 J 2 ASN B 191 ILE B 192 1 O ASN B 191 N ILE B 161 SHEET 1 K 2 TYR B 236 ILE B 237 0 SHEET 2 K 2 ASN B 277 ILE B 278 1 O ASN B 277 N ILE B 237 SHEET 1 L 2 GLU B 381 LEU B 382 0 SHEET 2 L 2 GLN B 408 ILE B 409 1 O GLN B 408 N LEU B 382 SHEET 1 M 2 GLU B 606 SER B 607 0 SHEET 2 M 2 GLY B 637 LEU B 638 1 O GLY B 637 N SER B 607 SHEET 1 N 2 PHE B 774 GLU B 775 0 SHEET 2 N 2 CYS B 803 SER B 805 1 O ALA B 804 N PHE B 774 SSBOND 1 CYS A 36 CYS A 49 1555 1555 2.03 SSBOND 2 CYS A 181 CYS A 187 1555 1555 2.04 SSBOND 3 CYS A 257 CYS A 270 1555 1555 2.03 SSBOND 4 CYS A 260 CYS A 267 1555 1555 2.04 SSBOND 5 CYS A 479 CYS A 509 1555 1555 2.02 SSBOND 6 CYS A 776 CYS A 803 1555 1555 2.02 SSBOND 7 CYS B 36 CYS B 49 1555 1555 2.04 SSBOND 8 CYS B 181 CYS B 187 1555 1555 2.04 SSBOND 9 CYS B 257 CYS B 270 1555 1555 2.04 SSBOND 10 CYS B 260 CYS B 267 1555 1555 2.05 SSBOND 11 CYS B 479 CYS B 509 1555 1555 2.04 SSBOND 12 CYS B 776 CYS B 803 1555 1555 2.03 LINK ND2 ASN A 293 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 395 C1 NAG A1012 1555 1555 1.43 LINK ND2 ASN A 511 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN A 546 C1 NAG A1007 1555 1555 1.45 LINK ND2 ASN A 590 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN A 640 C1 NAG A1013 1555 1555 1.44 LINK ND2 ASN A 680 C1 NAG A1011 1555 1555 1.45 LINK ND2 ASN B 293 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN B 395 C1 NAG B 913 1555 1555 1.44 LINK ND2 ASN B 511 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN B 546 C1 NAG B 908 1555 1555 1.44 LINK ND2 ASN B 590 C1 NAG H 1 1555 1555 1.45 LINK ND2 ASN B 640 C1 NAG B 914 1555 1555 1.44 LINK ND2 ASN B 680 C1 NAG B 912 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.45 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.45 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.44 CISPEP 1 TYR A 34 PRO A 35 0 3.95 CISPEP 2 ASN A 97 PRO A 98 0 -3.28 CISPEP 3 SER A 805 PRO A 806 0 -0.43 CISPEP 4 TYR B 34 PRO B 35 0 3.30 CISPEP 5 ASN B 97 PRO B 98 0 -5.01 CISPEP 6 SER B 805 PRO B 806 0 -7.74 CRYST1 71.380 148.750 85.770 90.00 103.39 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014010 0.000000 0.003335 0.00000 SCALE2 0.000000 0.006723 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011985 0.00000