PDB Short entry for 3W3K HEADER IMMUNE SYSTEM 22-DEC-12 3W3K TITLE CRYSTAL STRUCTURE OF HUMAN TLR8 IN COMPLEX WITH CL075 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 8; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 27-827; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TLR8, UNQ249/PRO286; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7215; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: S2 KEYWDS LEUCINE RICH REPEAT, RNA, GLYCOSYLATION, RNA RECOGNITION, SSRNA, KEYWDS 2 RECEPTOR, RNA RECEPTOR, INNATE IMMUNITY, RNA BINDING, SECRETED, KEYWDS 3 CL075, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR H.TANJI,U.OHTO,T.SHIMIZU REVDAT 2 29-JUL-20 3W3K 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 03-APR-13 3W3K 0 JRNL AUTH H.TANJI,U.OHTO,T.SHIBATA,K.MIYAKE,T.SHIMIZU JRNL TITL STRUCTURAL REORGANIZATION OF THE TOLL-LIKE RECEPTOR 8 DIMER JRNL TITL 2 INDUCED BY AGONISTIC LIGANDS JRNL REF SCIENCE V. 339 1426 2013 JRNL REFN ISSN 0036-8075 JRNL PMID 23520111 JRNL DOI 10.1126/SCIENCE.1229159 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 3 NUMBER OF REFLECTIONS : 75205 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 3782 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.0879 - 6.8858 0.91 2666 167 0.2151 0.2324 REMARK 3 2 6.8858 - 5.4711 1.00 2907 158 0.1915 0.2080 REMARK 3 3 5.4711 - 4.7812 1.00 2906 153 0.1660 0.2222 REMARK 3 4 4.7812 - 4.3447 1.00 2889 168 0.1595 0.2042 REMARK 3 5 4.3447 - 4.0337 1.00 2890 154 0.1604 0.1680 REMARK 3 6 4.0337 - 3.7962 0.66 1874 136 0.1706 0.2091 REMARK 3 7 3.7962 - 3.6062 0.62 1766 97 0.1848 0.2170 REMARK 3 8 3.6062 - 3.4493 1.00 2542 165 0.2080 0.2538 REMARK 3 9 3.4493 - 3.3166 1.00 2181 123 0.2108 0.2716 REMARK 3 10 3.3166 - 3.2023 1.00 2902 135 0.2323 0.2940 REMARK 3 11 3.2023 - 3.1022 1.00 2894 142 0.2405 0.3154 REMARK 3 12 3.1022 - 3.0136 1.00 2887 149 0.2332 0.2867 REMARK 3 13 3.0136 - 2.9343 1.00 2920 141 0.2396 0.2620 REMARK 3 14 2.9343 - 2.8627 1.00 2902 123 0.2309 0.3299 REMARK 3 15 2.8627 - 2.7976 1.00 2853 147 0.2260 0.2666 REMARK 3 16 2.7976 - 2.7381 1.00 2921 144 0.2203 0.2739 REMARK 3 17 2.7381 - 2.6834 1.00 2507 127 0.2351 0.3057 REMARK 3 18 2.6834 - 2.6327 0.99 968 67 0.2294 0.3110 REMARK 3 19 2.6327 - 2.5857 0.99 2872 133 0.2347 0.2734 REMARK 3 20 2.5857 - 2.5419 0.98 2843 155 0.2325 0.2562 REMARK 3 21 2.5419 - 2.5009 0.98 2780 157 0.2320 0.2834 REMARK 3 22 2.5009 - 2.4624 0.97 2828 153 0.2327 0.2908 REMARK 3 23 2.4624 - 2.4262 0.97 2774 132 0.2351 0.2721 REMARK 3 24 2.4262 - 2.3921 0.96 2777 144 0.2428 0.2924 REMARK 3 25 2.3921 - 2.3598 0.95 2699 129 0.2441 0.3108 REMARK 3 26 2.3598 - 2.3291 0.95 2745 144 0.2497 0.3174 REMARK 3 27 2.3291 - 2.3000 0.93 2730 139 0.2567 0.2913 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 12707 REMARK 3 ANGLE : 1.377 17261 REMARK 3 CHIRALITY : 0.113 2051 REMARK 3 PLANARITY : 0.007 2162 REMARK 3 DIHEDRAL : 21.306 4834 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 24.1456 4.1081 23.0903 REMARK 3 T TENSOR REMARK 3 T11: 0.2714 T22: 0.3179 REMARK 3 T33: 0.2915 T12: 0.0112 REMARK 3 T13: -0.0479 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.9457 L22: 0.6377 REMARK 3 L33: 1.1286 L12: 0.2379 REMARK 3 L13: -0.3448 L23: -0.3159 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: -0.1155 S13: 0.1842 REMARK 3 S21: 0.0888 S22: 0.0204 S23: 0.1581 REMARK 3 S31: -0.2581 S32: 0.2159 S33: -0.0213 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3W3K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000095841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75250 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 39.410 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14%(W/V) PEG3350, 0.2M POTASSIUM REMARK 280 FORMATE, 0.1M SODIUM CITRATE, PH 5.1, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 77.01000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 109.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 23 REMARK 465 SER A 24 REMARK 465 PRO A 25 REMARK 465 TRP A 26 REMARK 465 GLU A 27 REMARK 465 GLU A 28 REMARK 465 ASN A 29 REMARK 465 PHE A 30 REMARK 465 LYS A 40 REMARK 465 GLN A 41 REMARK 465 ASN A 42 REMARK 465 ASP A 43 REMARK 465 SER A 44 REMARK 465 GLN A 101 REMARK 465 HIS A 102 REMARK 465 GLN A 103 REMARK 465 ASN A 104 REMARK 465 GLY A 105 REMARK 465 ASN A 106 REMARK 465 PRO A 107 REMARK 465 GLY A 108 REMARK 465 ILE A 109 REMARK 465 GLN A 110 REMARK 465 SER A 111 REMARK 465 ASN A 112 REMARK 465 LYS A 435 REMARK 465 ASP A 436 REMARK 465 THR A 437 REMARK 465 ARG A 438 REMARK 465 GLN A 439 REMARK 465 SER A 440 REMARK 465 TYR A 441 REMARK 465 ALA A 442 REMARK 465 ASN A 443 REMARK 465 SER A 444 REMARK 465 SER A 445 REMARK 465 SER A 446 REMARK 465 PHE A 447 REMARK 465 GLN A 448 REMARK 465 ARG A 449 REMARK 465 HIS A 450 REMARK 465 ILE A 451 REMARK 465 ARG A 452 REMARK 465 LYS A 453 REMARK 465 ARG A 454 REMARK 465 ARG A 455 REMARK 465 SER A 456 REMARK 465 THR A 457 REMARK 465 ASP A 458 REMARK 465 GLU A 818 REMARK 465 LEU A 819 REMARK 465 THR A 820 REMARK 465 THR A 821 REMARK 465 CYS A 822 REMARK 465 VAL A 823 REMARK 465 SER A 824 REMARK 465 ASP A 825 REMARK 465 VAL A 826 REMARK 465 THR A 827 REMARK 465 GLU A 828 REMARK 465 PHE A 829 REMARK 465 LEU A 830 REMARK 465 VAL A 831 REMARK 465 PRO A 832 REMARK 465 ARG A 833 REMARK 465 ARG B 23 REMARK 465 SER B 24 REMARK 465 PRO B 25 REMARK 465 TRP B 26 REMARK 465 GLU B 27 REMARK 465 GLU B 28 REMARK 465 ASN B 29 REMARK 465 PHE B 30 REMARK 465 LYS B 40 REMARK 465 GLN B 41 REMARK 465 ASN B 42 REMARK 465 ASP B 43 REMARK 465 SER B 44 REMARK 465 GLN B 101 REMARK 465 HIS B 102 REMARK 465 GLN B 103 REMARK 465 ASN B 104 REMARK 465 GLY B 105 REMARK 465 ASN B 106 REMARK 465 PRO B 107 REMARK 465 GLY B 108 REMARK 465 ILE B 109 REMARK 465 GLN B 110 REMARK 465 SER B 111 REMARK 465 ASN B 112 REMARK 465 LYS B 435 REMARK 465 ASP B 436 REMARK 465 THR B 437 REMARK 465 ARG B 438 REMARK 465 GLN B 439 REMARK 465 SER B 440 REMARK 465 TYR B 441 REMARK 465 ALA B 442 REMARK 465 ASN B 443 REMARK 465 SER B 444 REMARK 465 SER B 445 REMARK 465 SER B 446 REMARK 465 PHE B 447 REMARK 465 GLN B 448 REMARK 465 ARG B 449 REMARK 465 HIS B 450 REMARK 465 ILE B 451 REMARK 465 ARG B 452 REMARK 465 LYS B 453 REMARK 465 ARG B 454 REMARK 465 ARG B 455 REMARK 465 SER B 456 REMARK 465 THR B 457 REMARK 465 ASP B 458 REMARK 465 LEU B 819 REMARK 465 THR B 820 REMARK 465 THR B 821 REMARK 465 CYS B 822 REMARK 465 VAL B 823 REMARK 465 SER B 824 REMARK 465 ASP B 825 REMARK 465 VAL B 826 REMARK 465 THR B 827 REMARK 465 GLU B 828 REMARK 465 PHE B 829 REMARK 465 LEU B 830 REMARK 465 VAL B 831 REMARK 465 PRO B 832 REMARK 465 ARG B 833 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 31 OG REMARK 470 VAL A 100 CG1 CG2 REMARK 470 GLU A 757 CG CD OE1 OE2 REMARK 470 THR A 758 OG1 CG2 REMARK 470 LYS A 759 CD CE NZ REMARK 470 THR A 760 OG1 CG2 REMARK 470 THR A 761 OG1 CG2 REMARK 470 THR A 762 OG1 CG2 REMARK 470 LEU A 817 CG CD1 CD2 REMARK 470 SER B 31 OG REMARK 470 VAL B 100 CG1 CG2 REMARK 470 GLU B 757 CG CD OE1 OE2 REMARK 470 THR B 758 OG1 CG2 REMARK 470 LYS B 759 CG CD CE NZ REMARK 470 THR B 760 OG1 CG2 REMARK 470 THR B 761 OG1 CG2 REMARK 470 THR B 762 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 34 OG1 THR A 60 2.02 REMARK 500 O LEU B 817 O HOH B 1151 2.05 REMARK 500 O ALA A 664 O HOH A 1120 2.12 REMARK 500 ND2 ASN A 511 C2 NAG D 1 2.13 REMARK 500 O TYR B 64 O HOH B 1134 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 250 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 34 138.27 -174.09 REMARK 500 THR A 66 -60.26 -100.67 REMARK 500 ARG A 128 -60.30 -109.60 REMARK 500 ASN A 156 -169.66 -123.62 REMARK 500 LYS A 173 -61.55 -104.08 REMARK 500 PHE A 183 -135.68 49.99 REMARK 500 SER A 214 -18.55 69.16 REMARK 500 PRO A 264 40.69 -90.63 REMARK 500 MET A 310 76.93 -118.26 REMARK 500 VAL A 378 81.48 64.60 REMARK 500 SER A 418 -74.42 -58.73 REMARK 500 GLU A 427 66.07 61.08 REMARK 500 PRO A 505 -172.79 -66.90 REMARK 500 LEU A 550 -3.46 68.45 REMARK 500 ASP A 601 -104.03 59.47 REMARK 500 ASN A 698 -168.00 -126.10 REMARK 500 LEU A 703 139.15 -37.79 REMARK 500 THR A 777 -179.97 -68.02 REMARK 500 ALA A 804 -71.10 -93.36 REMARK 500 THR B 66 -64.90 -124.22 REMARK 500 ASP B 72 -2.98 74.01 REMARK 500 GLN B 84 -115.14 49.25 REMARK 500 GLN B 87 -121.91 36.00 REMARK 500 LEU B 124 -67.08 -136.74 REMARK 500 LYS B 125 -15.40 67.68 REMARK 500 ILE B 166 -55.93 -128.15 REMARK 500 ILE B 170 -30.55 -38.97 REMARK 500 LYS B 173 -61.07 -103.94 REMARK 500 PHE B 183 -137.02 50.72 REMARK 500 SER B 214 -20.04 80.04 REMARK 500 PRO B 264 44.76 -89.15 REMARK 500 MET B 310 64.15 -118.24 REMARK 500 LYS B 314 -57.87 -125.02 REMARK 500 ASN B 321 -168.68 -126.55 REMARK 500 VAL B 378 81.71 65.88 REMARK 500 SER B 418 -74.39 -57.32 REMARK 500 GLU B 427 69.84 61.01 REMARK 500 PRO B 505 -177.90 -65.12 REMARK 500 LEU B 550 -2.05 70.31 REMARK 500 ASP B 601 -25.39 66.54 REMARK 500 ASN B 618 -169.88 -125.58 REMARK 500 ASN B 674 -169.38 -105.36 REMARK 500 ASN B 698 -168.81 -125.31 REMARK 500 ASN B 722 -169.54 -125.57 REMARK 500 PHE B 731 -71.87 -60.97 REMARK 500 ASN B 746 -169.91 -124.77 REMARK 500 THR B 758 69.11 67.13 REMARK 500 LYS B 759 -69.87 -96.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 701 PHE A 702 -146.47 REMARK 500 PHE A 702 LEU A 703 -140.27 REMARK 500 LEU B 86 GLN B 87 140.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3W3G RELATED DB: PDB REMARK 900 RELATED ID: 3W3J RELATED DB: PDB REMARK 900 RELATED ID: 3W3L RELATED DB: PDB REMARK 900 RELATED ID: 3W3M RELATED DB: PDB REMARK 900 RELATED ID: 3W3N RELATED DB: PDB DBREF 3W3K A 27 827 UNP Q9NR97 TLR8_HUMAN 27 827 DBREF 3W3K B 27 827 UNP Q9NR97 TLR8_HUMAN 27 827 SEQADV 3W3K ARG A 23 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K SER A 24 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K PRO A 25 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K TRP A 26 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K GLU A 828 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K PHE A 829 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K LEU A 830 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K VAL A 831 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K PRO A 832 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K ARG A 833 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K ARG B 23 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K SER B 24 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K PRO B 25 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K TRP B 26 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K GLU B 828 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K PHE B 829 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K LEU B 830 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K VAL B 831 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K PRO B 832 UNP Q9NR97 EXPRESSION TAG SEQADV 3W3K ARG B 833 UNP Q9NR97 EXPRESSION TAG SEQRES 1 A 811 ARG SER PRO TRP GLU GLU ASN PHE SER ARG SER TYR PRO SEQRES 2 A 811 CYS ASP GLU LYS LYS GLN ASN ASP SER VAL ILE ALA GLU SEQRES 3 A 811 CYS SER ASN ARG ARG LEU GLN GLU VAL PRO GLN THR VAL SEQRES 4 A 811 GLY LYS TYR VAL THR GLU LEU ASP LEU SER ASP ASN PHE SEQRES 5 A 811 ILE THR HIS ILE THR ASN GLU SER PHE GLN GLY LEU GLN SEQRES 6 A 811 ASN LEU THR LYS ILE ASN LEU ASN HIS ASN PRO ASN VAL SEQRES 7 A 811 GLN HIS GLN ASN GLY ASN PRO GLY ILE GLN SER ASN GLY SEQRES 8 A 811 LEU ASN ILE THR ASP GLY ALA PHE LEU ASN LEU LYS ASN SEQRES 9 A 811 LEU ARG GLU LEU LEU LEU GLU ASP ASN GLN LEU PRO GLN SEQRES 10 A 811 ILE PRO SER GLY LEU PRO GLU SER LEU THR GLU LEU SER SEQRES 11 A 811 LEU ILE GLN ASN ASN ILE TYR ASN ILE THR LYS GLU GLY SEQRES 12 A 811 ILE SER ARG LEU ILE ASN LEU LYS ASN LEU TYR LEU ALA SEQRES 13 A 811 TRP ASN CYS TYR PHE ASN LYS VAL CYS GLU LYS THR ASN SEQRES 14 A 811 ILE GLU ASP GLY VAL PHE GLU THR LEU THR ASN LEU GLU SEQRES 15 A 811 LEU LEU SER LEU SER PHE ASN SER LEU SER HIS VAL PRO SEQRES 16 A 811 PRO LYS LEU PRO SER SER LEU ARG LYS LEU PHE LEU SER SEQRES 17 A 811 ASN THR GLN ILE LYS TYR ILE SER GLU GLU ASP PHE LYS SEQRES 18 A 811 GLY LEU ILE ASN LEU THR LEU LEU ASP LEU SER GLY ASN SEQRES 19 A 811 CYS PRO ARG CYS PHE ASN ALA PRO PHE PRO CYS VAL PRO SEQRES 20 A 811 CYS ASP GLY GLY ALA SER ILE ASN ILE ASP ARG PHE ALA SEQRES 21 A 811 PHE GLN ASN LEU THR GLN LEU ARG TYR LEU ASN LEU SER SEQRES 22 A 811 SER THR SER LEU ARG LYS ILE ASN ALA ALA TRP PHE LYS SEQRES 23 A 811 ASN MET PRO HIS LEU LYS VAL LEU ASP LEU GLU PHE ASN SEQRES 24 A 811 TYR LEU VAL GLY GLU ILE ALA SER GLY ALA PHE LEU THR SEQRES 25 A 811 MET LEU PRO ARG LEU GLU ILE LEU ASP LEU SER PHE ASN SEQRES 26 A 811 TYR ILE LYS GLY SER TYR PRO GLN HIS ILE ASN ILE SER SEQRES 27 A 811 ARG ASN PHE SER LYS LEU LEU SER LEU ARG ALA LEU HIS SEQRES 28 A 811 LEU ARG GLY TYR VAL PHE GLN GLU LEU ARG GLU ASP ASP SEQRES 29 A 811 PHE GLN PRO LEU MET GLN LEU PRO ASN LEU SER THR ILE SEQRES 30 A 811 ASN LEU GLY ILE ASN PHE ILE LYS GLN ILE ASP PHE LYS SEQRES 31 A 811 LEU PHE GLN ASN PHE SER ASN LEU GLU ILE ILE TYR LEU SEQRES 32 A 811 SER GLU ASN ARG ILE SER PRO LEU VAL LYS ASP THR ARG SEQRES 33 A 811 GLN SER TYR ALA ASN SER SER SER PHE GLN ARG HIS ILE SEQRES 34 A 811 ARG LYS ARG ARG SER THR ASP PHE GLU PHE ASP PRO HIS SEQRES 35 A 811 SER ASN PHE TYR HIS PHE THR ARG PRO LEU ILE LYS PRO SEQRES 36 A 811 GLN CYS ALA ALA TYR GLY LYS ALA LEU ASP LEU SER LEU SEQRES 37 A 811 ASN SER ILE PHE PHE ILE GLY PRO ASN GLN PHE GLU ASN SEQRES 38 A 811 LEU PRO ASP ILE ALA CYS LEU ASN LEU SER ALA ASN SER SEQRES 39 A 811 ASN ALA GLN VAL LEU SER GLY THR GLU PHE SER ALA ILE SEQRES 40 A 811 PRO HIS VAL LYS TYR LEU ASP LEU THR ASN ASN ARG LEU SEQRES 41 A 811 ASP PHE ASP ASN ALA SER ALA LEU THR GLU LEU SER ASP SEQRES 42 A 811 LEU GLU VAL LEU ASP LEU SER TYR ASN SER HIS TYR PHE SEQRES 43 A 811 ARG ILE ALA GLY VAL THR HIS HIS LEU GLU PHE ILE GLN SEQRES 44 A 811 ASN PHE THR ASN LEU LYS VAL LEU ASN LEU SER HIS ASN SEQRES 45 A 811 ASN ILE TYR THR LEU THR ASP LYS TYR ASN LEU GLU SER SEQRES 46 A 811 LYS SER LEU VAL GLU LEU VAL PHE SER GLY ASN ARG LEU SEQRES 47 A 811 ASP ILE LEU TRP ASN ASP ASP ASP ASN ARG TYR ILE SER SEQRES 48 A 811 ILE PHE LYS GLY LEU LYS ASN LEU THR ARG LEU ASP LEU SEQRES 49 A 811 SER LEU ASN ARG LEU LYS HIS ILE PRO ASN GLU ALA PHE SEQRES 50 A 811 LEU ASN LEU PRO ALA SER LEU THR GLU LEU HIS ILE ASN SEQRES 51 A 811 ASP ASN MET LEU LYS PHE PHE ASN TRP THR LEU LEU GLN SEQRES 52 A 811 GLN PHE PRO ARG LEU GLU LEU LEU ASP LEU ARG GLY ASN SEQRES 53 A 811 LYS LEU LEU PHE LEU THR ASP SER LEU SER ASP PHE THR SEQRES 54 A 811 SER SER LEU ARG THR LEU LEU LEU SER HIS ASN ARG ILE SEQRES 55 A 811 SER HIS LEU PRO SER GLY PHE LEU SER GLU VAL SER SER SEQRES 56 A 811 LEU LYS HIS LEU ASP LEU SER SER ASN LEU LEU LYS THR SEQRES 57 A 811 ILE ASN LYS SER ALA LEU GLU THR LYS THR THR THR LYS SEQRES 58 A 811 LEU SER MET LEU GLU LEU HIS GLY ASN PRO PHE GLU CYS SEQRES 59 A 811 THR CYS ASP ILE GLY ASP PHE ARG ARG TRP MET ASP GLU SEQRES 60 A 811 HIS LEU ASN VAL LYS ILE PRO ARG LEU VAL ASP VAL ILE SEQRES 61 A 811 CYS ALA SER PRO GLY ASP GLN ARG GLY LYS SER ILE VAL SEQRES 62 A 811 SER LEU GLU LEU THR THR CYS VAL SER ASP VAL THR GLU SEQRES 63 A 811 PHE LEU VAL PRO ARG SEQRES 1 B 811 ARG SER PRO TRP GLU GLU ASN PHE SER ARG SER TYR PRO SEQRES 2 B 811 CYS ASP GLU LYS LYS GLN ASN ASP SER VAL ILE ALA GLU SEQRES 3 B 811 CYS SER ASN ARG ARG LEU GLN GLU VAL PRO GLN THR VAL SEQRES 4 B 811 GLY LYS TYR VAL THR GLU LEU ASP LEU SER ASP ASN PHE SEQRES 5 B 811 ILE THR HIS ILE THR ASN GLU SER PHE GLN GLY LEU GLN SEQRES 6 B 811 ASN LEU THR LYS ILE ASN LEU ASN HIS ASN PRO ASN VAL SEQRES 7 B 811 GLN HIS GLN ASN GLY ASN PRO GLY ILE GLN SER ASN GLY SEQRES 8 B 811 LEU ASN ILE THR ASP GLY ALA PHE LEU ASN LEU LYS ASN SEQRES 9 B 811 LEU ARG GLU LEU LEU LEU GLU ASP ASN GLN LEU PRO GLN SEQRES 10 B 811 ILE PRO SER GLY LEU PRO GLU SER LEU THR GLU LEU SER SEQRES 11 B 811 LEU ILE GLN ASN ASN ILE TYR ASN ILE THR LYS GLU GLY SEQRES 12 B 811 ILE SER ARG LEU ILE ASN LEU LYS ASN LEU TYR LEU ALA SEQRES 13 B 811 TRP ASN CYS TYR PHE ASN LYS VAL CYS GLU LYS THR ASN SEQRES 14 B 811 ILE GLU ASP GLY VAL PHE GLU THR LEU THR ASN LEU GLU SEQRES 15 B 811 LEU LEU SER LEU SER PHE ASN SER LEU SER HIS VAL PRO SEQRES 16 B 811 PRO LYS LEU PRO SER SER LEU ARG LYS LEU PHE LEU SER SEQRES 17 B 811 ASN THR GLN ILE LYS TYR ILE SER GLU GLU ASP PHE LYS SEQRES 18 B 811 GLY LEU ILE ASN LEU THR LEU LEU ASP LEU SER GLY ASN SEQRES 19 B 811 CYS PRO ARG CYS PHE ASN ALA PRO PHE PRO CYS VAL PRO SEQRES 20 B 811 CYS ASP GLY GLY ALA SER ILE ASN ILE ASP ARG PHE ALA SEQRES 21 B 811 PHE GLN ASN LEU THR GLN LEU ARG TYR LEU ASN LEU SER SEQRES 22 B 811 SER THR SER LEU ARG LYS ILE ASN ALA ALA TRP PHE LYS SEQRES 23 B 811 ASN MET PRO HIS LEU LYS VAL LEU ASP LEU GLU PHE ASN SEQRES 24 B 811 TYR LEU VAL GLY GLU ILE ALA SER GLY ALA PHE LEU THR SEQRES 25 B 811 MET LEU PRO ARG LEU GLU ILE LEU ASP LEU SER PHE ASN SEQRES 26 B 811 TYR ILE LYS GLY SER TYR PRO GLN HIS ILE ASN ILE SER SEQRES 27 B 811 ARG ASN PHE SER LYS LEU LEU SER LEU ARG ALA LEU HIS SEQRES 28 B 811 LEU ARG GLY TYR VAL PHE GLN GLU LEU ARG GLU ASP ASP SEQRES 29 B 811 PHE GLN PRO LEU MET GLN LEU PRO ASN LEU SER THR ILE SEQRES 30 B 811 ASN LEU GLY ILE ASN PHE ILE LYS GLN ILE ASP PHE LYS SEQRES 31 B 811 LEU PHE GLN ASN PHE SER ASN LEU GLU ILE ILE TYR LEU SEQRES 32 B 811 SER GLU ASN ARG ILE SER PRO LEU VAL LYS ASP THR ARG SEQRES 33 B 811 GLN SER TYR ALA ASN SER SER SER PHE GLN ARG HIS ILE SEQRES 34 B 811 ARG LYS ARG ARG SER THR ASP PHE GLU PHE ASP PRO HIS SEQRES 35 B 811 SER ASN PHE TYR HIS PHE THR ARG PRO LEU ILE LYS PRO SEQRES 36 B 811 GLN CYS ALA ALA TYR GLY LYS ALA LEU ASP LEU SER LEU SEQRES 37 B 811 ASN SER ILE PHE PHE ILE GLY PRO ASN GLN PHE GLU ASN SEQRES 38 B 811 LEU PRO ASP ILE ALA CYS LEU ASN LEU SER ALA ASN SER SEQRES 39 B 811 ASN ALA GLN VAL LEU SER GLY THR GLU PHE SER ALA ILE SEQRES 40 B 811 PRO HIS VAL LYS TYR LEU ASP LEU THR ASN ASN ARG LEU SEQRES 41 B 811 ASP PHE ASP ASN ALA SER ALA LEU THR GLU LEU SER ASP SEQRES 42 B 811 LEU GLU VAL LEU ASP LEU SER TYR ASN SER HIS TYR PHE SEQRES 43 B 811 ARG ILE ALA GLY VAL THR HIS HIS LEU GLU PHE ILE GLN SEQRES 44 B 811 ASN PHE THR ASN LEU LYS VAL LEU ASN LEU SER HIS ASN SEQRES 45 B 811 ASN ILE TYR THR LEU THR ASP LYS TYR ASN LEU GLU SER SEQRES 46 B 811 LYS SER LEU VAL GLU LEU VAL PHE SER GLY ASN ARG LEU SEQRES 47 B 811 ASP ILE LEU TRP ASN ASP ASP ASP ASN ARG TYR ILE SER SEQRES 48 B 811 ILE PHE LYS GLY LEU LYS ASN LEU THR ARG LEU ASP LEU SEQRES 49 B 811 SER LEU ASN ARG LEU LYS HIS ILE PRO ASN GLU ALA PHE SEQRES 50 B 811 LEU ASN LEU PRO ALA SER LEU THR GLU LEU HIS ILE ASN SEQRES 51 B 811 ASP ASN MET LEU LYS PHE PHE ASN TRP THR LEU LEU GLN SEQRES 52 B 811 GLN PHE PRO ARG LEU GLU LEU LEU ASP LEU ARG GLY ASN SEQRES 53 B 811 LYS LEU LEU PHE LEU THR ASP SER LEU SER ASP PHE THR SEQRES 54 B 811 SER SER LEU ARG THR LEU LEU LEU SER HIS ASN ARG ILE SEQRES 55 B 811 SER HIS LEU PRO SER GLY PHE LEU SER GLU VAL SER SER SEQRES 56 B 811 LEU LYS HIS LEU ASP LEU SER SER ASN LEU LEU LYS THR SEQRES 57 B 811 ILE ASN LYS SER ALA LEU GLU THR LYS THR THR THR LYS SEQRES 58 B 811 LEU SER MET LEU GLU LEU HIS GLY ASN PRO PHE GLU CYS SEQRES 59 B 811 THR CYS ASP ILE GLY ASP PHE ARG ARG TRP MET ASP GLU SEQRES 60 B 811 HIS LEU ASN VAL LYS ILE PRO ARG LEU VAL ASP VAL ILE SEQRES 61 B 811 CYS ALA SER PRO GLY ASP GLN ARG GLY LYS SER ILE VAL SEQRES 62 B 811 SER LEU GLU LEU THR THR CYS VAL SER ASP VAL THR GLU SEQRES 63 B 811 PHE LEU VAL PRO ARG MODRES 3W3K ASN B 511 ASN GLYCOSYLATION SITE MODRES 3W3K ASN A 640 ASN GLYCOSYLATION SITE MODRES 3W3K ASN A 546 ASN GLYCOSYLATION SITE MODRES 3W3K ASN A 293 ASN GLYCOSYLATION SITE MODRES 3W3K ASN B 590 ASN GLYCOSYLATION SITE MODRES 3W3K ASN A 511 ASN GLYCOSYLATION SITE MODRES 3W3K ASN A 680 ASN GLYCOSYLATION SITE MODRES 3W3K ASN B 640 ASN GLYCOSYLATION SITE MODRES 3W3K ASN B 293 ASN GLYCOSYLATION SITE MODRES 3W3K ASN A 590 ASN GLYCOSYLATION SITE MODRES 3W3K ASN B 395 ASN GLYCOSYLATION SITE MODRES 3W3K ASN B 546 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET MAN H 4 11 HET MAN H 5 11 HET L07 A 901 17 HET NAG A 910 14 HET NAG A 916 14 HET NAG A 917 14 HET L07 B 901 17 HET NAG B 909 14 HET NAG B 915 14 HET NAG B 916 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM L07 2-PROPYL[1,3]THIAZOLO[4,5-C]QUINOLIN-4-AMINE HETSYN L07 CL075, 3M-002 FORMUL 3 NAG 18(C8 H15 N O6) FORMUL 3 BMA 5(C6 H12 O6) FORMUL 3 MAN 8(C6 H12 O6) FORMUL 9 L07 2(C13 H13 N3 S) FORMUL 17 HOH *360(H2 O) HELIX 1 1 THR A 162 SER A 167 1 6 HELIX 2 2 CYS A 270 ALA A 274 5 5 HELIX 3 3 ASN A 303 LYS A 308 5 6 HELIX 4 4 LEU A 323 SER A 329 1 7 HELIX 5 5 GLY A 330 LEU A 336 5 7 HELIX 6 6 SER A 360 LEU A 366 5 7 HELIX 7 7 ARG A 383 MET A 391 5 9 HELIX 8 8 PHE A 411 PHE A 417 5 7 HELIX 9 9 LYS A 476 ALA A 481 1 6 HELIX 10 10 ASN A 564 ARG A 569 1 6 HELIX 11 11 LEU A 577 PHE A 583 5 7 HELIX 12 12 ARG A 619 TRP A 624 1 6 HELIX 13 13 PRO A 655 ASN A 661 1 7 HELIX 14 14 ASN A 680 PHE A 687 5 8 HELIX 15 15 SER A 706 PHE A 710 5 5 HELIX 16 16 ASN A 752 GLU A 757 5 6 HELIX 17 17 THR A 777 ASP A 779 5 3 HELIX 18 18 ILE A 780 HIS A 790 1 11 HELIX 19 19 ARG A 797 VAL A 801 5 5 HELIX 20 20 SER A 813 LEU A 817 5 5 HELIX 21 21 THR B 162 SER B 167 1 6 HELIX 22 22 VAL B 196 LEU B 200 5 5 HELIX 23 23 CYS B 270 ALA B 274 5 5 HELIX 24 24 ASN B 303 LYS B 308 5 6 HELIX 25 25 LEU B 323 SER B 329 1 7 HELIX 26 26 GLY B 330 LEU B 336 5 7 HELIX 27 27 SER B 360 LEU B 366 5 7 HELIX 28 28 GLU B 384 MET B 391 5 8 HELIX 29 29 LYS B 412 PHE B 417 1 6 HELIX 30 30 LYS B 476 ALA B 481 1 6 HELIX 31 31 ASN B 564 ARG B 569 1 6 HELIX 32 32 LEU B 577 PHE B 583 5 7 HELIX 33 33 ARG B 619 TRP B 624 1 6 HELIX 34 34 PRO B 655 ASN B 661 1 7 HELIX 35 35 ASN B 680 PHE B 687 5 8 HELIX 36 36 SER B 706 THR B 711 1 6 HELIX 37 37 ASN B 752 GLU B 757 1 6 HELIX 38 38 THR B 777 ASP B 779 5 3 HELIX 39 39 ILE B 780 HIS B 790 1 11 HELIX 40 40 ARG B 797 VAL B 801 5 5 HELIX 41 41 SER B 813 LEU B 817 5 5 SHEET 1 A28 ASP A 37 GLU A 38 0 SHEET 2 A28 ILE A 46 GLU A 48 -1 O GLU A 48 N ASP A 37 SHEET 3 A28 GLU A 67 ASP A 69 1 O GLU A 67 N ALA A 47 SHEET 4 A28 LYS A 91 ASN A 93 1 O LYS A 91 N LEU A 68 SHEET 5 A28 GLU A 129 LEU A 131 1 O GLU A 129 N ILE A 92 SHEET 6 A28 GLU A 150 SER A 152 1 O GLU A 150 N LEU A 130 SHEET 7 A28 ASN A 174 TYR A 176 1 O TYR A 176 N LEU A 151 SHEET 8 A28 LEU A 205 SER A 207 1 O LEU A 205 N LEU A 175 SHEET 9 A28 LYS A 226 PHE A 228 1 O PHE A 228 N LEU A 206 SHEET 10 A28 LEU A 250 ASP A 252 1 O ASP A 252 N LEU A 227 SHEET 11 A28 TYR A 291 ASN A 293 1 O ASN A 293 N LEU A 251 SHEET 12 A28 VAL A 315 ASP A 317 1 O VAL A 315 N LEU A 292 SHEET 13 A28 ILE A 341 ASP A 343 1 O ILE A 341 N LEU A 316 SHEET 14 A28 ALA A 371 HIS A 373 1 O HIS A 373 N LEU A 342 SHEET 15 A28 THR A 398 ASN A 400 1 O ASN A 400 N LEU A 372 SHEET 16 A28 ILE A 422 TYR A 424 1 O TYR A 424 N ILE A 399 SHEET 17 A28 ALA A 485 ASP A 487 1 O ALA A 485 N ILE A 423 SHEET 18 A28 CYS A 509 ASN A 511 1 O CYS A 509 N LEU A 486 SHEET 19 A28 TYR A 534 ASP A 536 1 O ASP A 536 N LEU A 510 SHEET 20 A28 VAL A 558 ASP A 560 1 O VAL A 558 N LEU A 535 SHEET 21 A28 VAL A 588 ASN A 590 1 O VAL A 588 N LEU A 559 SHEET 22 A28 GLU A 612 VAL A 614 1 O GLU A 612 N LEU A 589 SHEET 23 A28 ARG A 643 ASP A 645 1 O ARG A 643 N LEU A 613 SHEET 24 A28 GLU A 668 HIS A 670 1 O HIS A 670 N LEU A 644 SHEET 25 A28 LEU A 692 ASP A 694 1 O ASP A 694 N LEU A 669 SHEET 26 A28 THR A 716 LEU A 718 1 O LEU A 718 N LEU A 693 SHEET 27 A28 HIS A 740 ASP A 742 1 O ASP A 742 N LEU A 717 SHEET 28 A28 MET A 766 GLU A 768 1 O MET A 766 N LEU A 741 SHEET 1 B 2 HIS A 77 ILE A 78 0 SHEET 2 B 2 ASN A 115 ILE A 116 1 O ASN A 115 N ILE A 78 SHEET 1 C 2 ASN A 160 ILE A 161 0 SHEET 2 C 2 ASN A 191 ILE A 192 1 O ASN A 191 N ILE A 161 SHEET 1 D 2 TYR A 236 ILE A 237 0 SHEET 2 D 2 ASN A 277 ILE A 278 1 O ASN A 277 N ILE A 237 SHEET 1 E 2 GLU A 381 LEU A 382 0 SHEET 2 E 2 GLN A 408 ILE A 409 1 O GLN A 408 N LEU A 382 SHEET 1 F28 ASP B 37 GLU B 38 0 SHEET 2 F28 ILE B 46 GLU B 48 -1 O GLU B 48 N ASP B 37 SHEET 3 F28 GLU B 67 ASP B 69 1 O GLU B 67 N ALA B 47 SHEET 4 F28 LYS B 91 ASN B 93 1 O ASN B 93 N LEU B 68 SHEET 5 F28 GLU B 129 LEU B 131 1 O LEU B 131 N ILE B 92 SHEET 6 F28 GLU B 150 SER B 152 1 O GLU B 150 N LEU B 130 SHEET 7 F28 ASN B 174 TYR B 176 1 O TYR B 176 N LEU B 151 SHEET 8 F28 LEU B 205 SER B 207 1 O SER B 207 N LEU B 175 SHEET 9 F28 LYS B 226 PHE B 228 1 O PHE B 228 N LEU B 206 SHEET 10 F28 LEU B 250 ASP B 252 1 O ASP B 252 N LEU B 227 SHEET 11 F28 TYR B 291 ASN B 293 1 O ASN B 293 N LEU B 251 SHEET 12 F28 VAL B 315 ASP B 317 1 O ASP B 317 N LEU B 292 SHEET 13 F28 ILE B 341 ASP B 343 1 O ASP B 343 N LEU B 316 SHEET 14 F28 ALA B 371 HIS B 373 1 O HIS B 373 N LEU B 342 SHEET 15 F28 THR B 398 ASN B 400 1 O ASN B 400 N LEU B 372 SHEET 16 F28 ILE B 422 TYR B 424 1 O TYR B 424 N ILE B 399 SHEET 17 F28 ALA B 485 ASP B 487 1 O ALA B 485 N ILE B 423 SHEET 18 F28 CYS B 509 ASN B 511 1 O CYS B 509 N LEU B 486 SHEET 19 F28 TYR B 534 ASP B 536 1 O ASP B 536 N LEU B 510 SHEET 20 F28 VAL B 558 ASP B 560 1 O VAL B 558 N LEU B 535 SHEET 21 F28 VAL B 588 ASN B 590 1 O ASN B 590 N LEU B 559 SHEET 22 F28 GLU B 612 VAL B 614 1 O GLU B 612 N LEU B 589 SHEET 23 F28 ARG B 643 ASP B 645 1 O ARG B 643 N LEU B 613 SHEET 24 F28 GLU B 668 HIS B 670 1 O HIS B 670 N LEU B 644 SHEET 25 F28 LEU B 692 ASP B 694 1 O ASP B 694 N LEU B 669 SHEET 26 F28 THR B 716 LEU B 718 1 O THR B 716 N LEU B 693 SHEET 27 F28 HIS B 740 ASP B 742 1 O HIS B 740 N LEU B 717 SHEET 28 F28 MET B 766 GLU B 768 1 O MET B 766 N LEU B 741 SHEET 1 G 2 HIS B 77 ILE B 78 0 SHEET 2 G 2 ASN B 115 ILE B 116 1 O ASN B 115 N ILE B 78 SHEET 1 H 2 ASN B 160 ILE B 161 0 SHEET 2 H 2 ASN B 191 ILE B 192 1 O ASN B 191 N ILE B 161 SHEET 1 I 2 TYR B 236 ILE B 237 0 SHEET 2 I 2 ASN B 277 ILE B 278 1 O ASN B 277 N ILE B 237 SHEET 1 J 2 GLU B 381 LEU B 382 0 SHEET 2 J 2 GLN B 408 ILE B 409 1 O GLN B 408 N LEU B 382 SHEET 1 K 2 PHE B 774 GLU B 775 0 SHEET 2 K 2 CYS B 803 SER B 805 1 O ALA B 804 N PHE B 774 SSBOND 1 CYS A 36 CYS A 49 1555 1555 2.02 SSBOND 2 CYS A 181 CYS A 187 1555 1555 2.04 SSBOND 3 CYS A 257 CYS A 270 1555 1555 2.03 SSBOND 4 CYS A 260 CYS A 267 1555 1555 2.04 SSBOND 5 CYS A 479 CYS A 509 1555 1555 2.03 SSBOND 6 CYS A 776 CYS A 803 1555 1555 2.02 SSBOND 7 CYS B 36 CYS B 49 1555 1555 2.04 SSBOND 8 CYS B 181 CYS B 187 1555 1555 2.03 SSBOND 9 CYS B 257 CYS B 270 1555 1555 2.03 SSBOND 10 CYS B 260 CYS B 267 1555 1555 2.04 SSBOND 11 CYS B 479 CYS B 509 1555 1555 2.03 SSBOND 12 CYS B 776 CYS B 803 1555 1555 2.03 LINK ND2 ASN A 293 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 511 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 546 C1 NAG A 910 1555 1555 1.44 LINK ND2 ASN A 590 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 640 C1 NAG A 917 1555 1555 1.44 LINK ND2 ASN A 680 C1 NAG A 916 1555 1555 1.44 LINK ND2 ASN B 293 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN B 395 C1 NAG B 915 1555 1555 1.45 LINK ND2 ASN B 511 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN B 546 C1 NAG B 909 1555 1555 1.45 LINK ND2 ASN B 590 C1 NAG H 1 1555 1555 1.44 LINK ND2 ASN B 640 C1 NAG B 916 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O6 BMA C 3 C1 MAN C 5 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.45 LINK O6 BMA E 3 C1 MAN E 5 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.45 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.45 LINK O6 BMA F 3 C1 MAN F 5 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.44 LINK O3 BMA H 3 C1 MAN H 4 1555 1555 1.44 LINK O6 BMA H 3 C1 MAN H 5 1555 1555 1.44 CISPEP 1 TYR A 34 PRO A 35 0 -3.37 CISPEP 2 ASN A 97 PRO A 98 0 -11.13 CISPEP 3 SER A 805 PRO A 806 0 -18.14 CISPEP 4 TYR B 34 PRO B 35 0 -11.85 CISPEP 5 ASN B 97 PRO B 98 0 2.00 CISPEP 6 GLU B 757 THR B 758 0 25.08 CISPEP 7 SER B 805 PRO B 806 0 -4.41 CRYST1 72.410 154.020 86.860 90.00 103.03 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013810 0.000000 0.003196 0.00000 SCALE2 0.000000 0.006493 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011817 0.00000