PDB Short entry for 3WBE HEADER HYDROLASE 14-MAY-13 3WBE TITLE RICE OS3BGLU6 BETA-GLUCOSIDASE E178Q MUTANT IN A COVALENT COMPLEX WITH TITLE 2 GLC FROM GA4GE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GLUCOSIDASE 6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: OS3BGLU6 BETA-GLUCOSIDASE, UNP RESIDUES 38-521; COMPND 5 SYNONYM: OS3BGLU6; COMPND 6 EC: 3.2.1.21; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYZA SATIVA JAPONICA GROUP; SOURCE 3 ORGANISM_COMMON: JAPONICA RICE; SOURCE 4 ORGANISM_TAXID: 39947; SOURCE 5 STRAIN: YUKIHIKARI; SOURCE 6 GENE: BGLU6, LOC_OS03G11420, OS03G0212800; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ORIGAMI(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET32A(+)/DEST KEYWDS TIM BARREL, BETA-D-GLUCOSIDASE, COVALENTLY LINKED TO ALPHA-D- KEYWDS 2 GLUCOSIDE ON E394 (50% OCCUPANCY), SECRETED, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.SANSENYA,Y.HUA,J.R.K.CAIRNS REVDAT 2 29-JUL-20 3WBE 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE REVDAT 1 04-SEP-13 3WBE 0 JRNL AUTH Y.HUA,S.SANSENYA,C.SAETANG,S.WAKUTA,J.R.K.CAIRNS JRNL TITL ENZYMATIC AND STRUCTURAL CHARACTERIZATION OF HYDROLYSIS OF JRNL TITL 2 GIBBERELLIN A4 GLUCOSYL ESTER BY A RICE BETA-D-GLUCOSIDASE JRNL REF ARCH.BIOCHEM.BIOPHYS. V. 537 39 2013 JRNL REFN ISSN 0003-9861 JRNL PMID 23811195 JRNL DOI 10.1016/J.ABB.2013.06.005 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 39602 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2108 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2827 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.1570 REMARK 3 BIN FREE R VALUE SET COUNT : 162 REMARK 3 BIN FREE R VALUE : 0.1920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3842 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.132 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.392 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4119 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5604 ; 1.266 ; 1.933 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 505 ; 5.980 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 207 ;33.422 ;23.527 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 644 ;12.694 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;16.982 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 578 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3233 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2445 ; 0.725 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3940 ; 1.353 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1674 ; 2.009 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1661 ; 3.217 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3WBE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000096122. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : LN2-COOLED, FIXED-EXIT DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR, SI 111 REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41752 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.27600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RIGID BODY REFINEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 3GNO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG5000MME, 0.1M BIS/TRIS, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.52350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.68400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.60750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.68400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.52350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.60750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 PHE A 2 REMARK 465 THR A 3 REMARK 465 MET A 4 REMARK 465 ALA A 5 REMARK 465 GLN A 6 REMARK 465 GLN A 7 REMARK 465 SER A 8 REMARK 465 GLY A 9 REMARK 465 GLY A 10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 38 O HOH A 933 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 65 -129.97 53.51 REMARK 500 HIS A 132 55.26 -117.46 REMARK 500 TRP A 133 -6.07 89.28 REMARK 500 ASP A 134 59.09 -99.62 REMARK 500 TYR A 143 18.87 -147.68 REMARK 500 ASN A 209 103.78 -160.18 REMARK 500 GLN A 273 -63.37 -100.16 REMARK 500 ILE A 334 22.03 -148.39 REMARK 500 ALA A 362 -167.99 -79.09 REMARK 500 GLU A 451 59.02 -91.17 REMARK 500 TRP A 452 -132.30 55.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 GLC(501) AND GOL(502) ARE IN ALTERNATE CONFORMATIONS OF EACH OTHER. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: NULL REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: NULL REMARK 800 SITE_DESCRIPTION: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WBA RELATED DB: PDB REMARK 900 OS3BGLU6 E178Q WITH COVALENTLY BOUND GLUCOSE FROM P-NITROPHENYL REMARK 900 GLUCOSIDE. REMARK 900 RELATED ID: 3GNP RELATED DB: PDB REMARK 900 WILDTYPE OS3BGLU6 WITH COVALENTLY BOUND 2-FLUOROGLUCOSIDE. REMARK 900 RELATED ID: 3GNR RELATED DB: PDB REMARK 900 WILDTYPE OS3BGLU6 IN COMPLEX WITH OCTYL BETA-D-THIOGLUCOSIDE. REMARK 900 RELATED ID: 3GNO RELATED DB: PDB REMARK 900 NATIVE WILDTYPE OS3BGLU6 STRUCTURE. DBREF 3WBE A 5 488 UNP Q8L7J2 BGL06_ORYSJ 38 521 SEQADV 3WBE GLY A 0 UNP Q8L7J2 EXPRESSION TAG SEQADV 3WBE SER A 1 UNP Q8L7J2 EXPRESSION TAG SEQADV 3WBE PHE A 2 UNP Q8L7J2 EXPRESSION TAG SEQADV 3WBE THR A 3 UNP Q8L7J2 EXPRESSION TAG SEQADV 3WBE MET A 4 UNP Q8L7J2 EXPRESSION TAG SEQADV 3WBE GLN A 178 UNP Q8L7J2 GLU 211 ENGINEERED MUTATION SEQRES 1 A 489 GLY SER PHE THR MET ALA GLN GLN SER GLY GLY GLY LEU SEQRES 2 A 489 THR ARG GLY SER PHE PRO GLU GLY PHE VAL PHE GLY THR SEQRES 3 A 489 ALA SER ALA ALA TYR GLN TYR GLU GLY ALA VAL LYS GLU SEQRES 4 A 489 ASP GLY ARG GLY GLN THR ILE TRP ASP THR PHE ALA HIS SEQRES 5 A 489 THR PHE GLY LYS ILE THR ASP PHE SER ASN ALA ASP VAL SEQRES 6 A 489 ALA VAL ASP GLN TYR HIS ARG PHE GLU GLU ASP ILE GLN SEQRES 7 A 489 LEU MET ALA ASP MET GLY MET ASP ALA TYR ARG PHE SER SEQRES 8 A 489 ILE ALA TRP SER ARG ILE TYR PRO ASN GLY VAL GLY GLN SEQRES 9 A 489 VAL ASN GLN ALA GLY ILE ASP HIS TYR ASN LYS LEU ILE SEQRES 10 A 489 ASP ALA LEU LEU ALA LYS GLY ILE GLN PRO TYR VAL THR SEQRES 11 A 489 LEU TYR HIS TRP ASP LEU PRO GLN ALA LEU GLU ASP LYS SEQRES 12 A 489 TYR LYS GLY TRP LEU ASP ARG GLN ILE VAL ASP ASP PHE SEQRES 13 A 489 ALA ALA TYR ALA GLU THR CYS PHE ARG GLU PHE GLY ASP SEQRES 14 A 489 ARG VAL LYS HIS TRP ILE THR LEU ASN GLN PRO HIS THR SEQRES 15 A 489 VAL ALA ILE GLN GLY TYR ASP ALA GLY LEU GLN ALA PRO SEQRES 16 A 489 GLY ARG CYS SER VAL LEU LEU HIS LEU TYR CYS LYS ALA SEQRES 17 A 489 GLY ASN SER GLY THR GLU PRO TYR VAL VAL ALA HIS HIS SEQRES 18 A 489 PHE ILE LEU ALA HIS ALA ALA ALA ALA SER ILE TYR ARG SEQRES 19 A 489 THR LYS TYR LYS ALA THR GLN ASN GLY GLN LEU GLY ILE SEQRES 20 A 489 ALA PHE ASP VAL MET TRP PHE GLU PRO MET SER ASN THR SEQRES 21 A 489 THR ILE ASP ILE GLU ALA ALA LYS ARG ALA GLN GLU PHE SEQRES 22 A 489 GLN LEU GLY TRP PHE ALA ASP PRO PHE PHE PHE GLY ASP SEQRES 23 A 489 TYR PRO ALA THR MET ARG ALA ARG VAL GLY GLU ARG LEU SEQRES 24 A 489 PRO ARG PHE THR ALA ASP GLU ALA ALA VAL VAL LYS GLY SEQRES 25 A 489 ALA LEU ASP PHE VAL GLY ILE ASN HIS TYR THR THR TYR SEQRES 26 A 489 TYR THR ARG HIS ASN ASN THR ASN ILE ILE GLY THR LEU SEQRES 27 A 489 LEU ASN ASN THR LEU ALA ASP THR GLY THR VAL SER LEU SEQRES 28 A 489 PRO PHE LYS ASN GLY LYS PRO ILE GLY ASP ARG ALA ASN SEQRES 29 A 489 SER ILE TRP LEU TYR ILE VAL PRO ARG GLY MET ARG SER SEQRES 30 A 489 LEU MET ASN TYR VAL LYS GLU ARG TYR ASN SER PRO PRO SEQRES 31 A 489 VAL TYR ILE THR GLU ASN GLY MET ASP ASP SER ASN ASN SEQRES 32 A 489 PRO PHE ILE SER ILE LYS ASP ALA LEU LYS ASP SER LYS SEQRES 33 A 489 ARG ILE LYS TYR HIS ASN ASP TYR LEU THR ASN LEU ALA SEQRES 34 A 489 ALA SER ILE LYS GLU ASP GLY CYS ASP VAL ARG GLY TYR SEQRES 35 A 489 PHE ALA TRP SER LEU LEU ASP ASN TRP GLU TRP ALA ALA SEQRES 36 A 489 GLY TYR SER SER ARG PHE GLY LEU TYR PHE VAL ASP TYR SEQRES 37 A 489 LYS ASP ASN LEU LYS ARG TYR PRO LYS ASN SER VAL GLN SEQRES 38 A 489 TRP PHE LYS ALA LEU LEU LYS THR HET GLC A 501 11 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET GOL A 505 6 HET GOL A 506 6 HET GOL A 507 6 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GLC C6 H12 O6 FORMUL 3 GOL 6(C3 H8 O3) FORMUL 9 HOH *490(H2 O) HELIX 1 1 THR A 13 PHE A 17 5 5 HELIX 2 2 ALA A 28 GLU A 33 1 6 HELIX 3 3 LYS A 37 ARG A 41 5 5 HELIX 4 4 THR A 44 HIS A 51 1 8 HELIX 5 5 ASP A 67 GLY A 83 1 17 HELIX 6 6 ALA A 92 TYR A 97 1 6 HELIX 7 7 ASN A 105 LYS A 122 1 18 HELIX 8 8 PRO A 136 LYS A 144 1 9 HELIX 9 9 GLY A 145 ASP A 148 5 4 HELIX 10 10 ARG A 149 GLY A 167 1 19 HELIX 11 11 GLN A 178 ASP A 188 1 11 HELIX 12 12 THR A 212 TYR A 236 1 25 HELIX 13 13 TYR A 236 ASN A 241 1 6 HELIX 14 14 THR A 259 LEU A 274 1 16 HELIX 15 15 LEU A 274 GLY A 284 1 11 HELIX 16 16 PRO A 287 GLY A 295 1 9 HELIX 17 17 GLU A 296 LEU A 298 5 3 HELIX 18 18 THR A 302 LYS A 310 1 9 HELIX 19 19 ASN A 340 GLY A 346 1 7 HELIX 20 20 PRO A 371 TYR A 385 1 15 HELIX 21 21 SER A 406 LEU A 411 1 6 HELIX 22 22 ASP A 413 GLU A 433 1 21 HELIX 23 23 GLU A 451 TYR A 456 5 6 HELIX 24 24 LYS A 476 LEU A 486 1 11 SHEET 1 A 9 VAL A 22 ALA A 26 0 SHEET 2 A 9 ALA A 86 SER A 90 1 O ARG A 88 N THR A 25 SHEET 3 A 9 GLN A 125 TYR A 131 1 O THR A 129 N PHE A 89 SHEET 4 A 9 HIS A 172 ASN A 177 1 O ILE A 174 N VAL A 128 SHEET 5 A 9 GLN A 243 ASP A 249 1 O GLY A 245 N THR A 175 SHEET 6 A 9 PHE A 315 ASN A 319 1 O ASN A 319 N PHE A 248 SHEET 7 A 9 VAL A 390 ASN A 395 1 O TYR A 391 N ILE A 318 SHEET 8 A 9 VAL A 438 TRP A 444 1 O ARG A 439 N VAL A 390 SHEET 9 A 9 VAL A 22 ALA A 26 1 N GLY A 24 O TYR A 441 SHEET 1 B 3 TRP A 252 PRO A 255 0 SHEET 2 B 3 THR A 323 HIS A 328 1 O THR A 326 N GLU A 254 SHEET 3 B 3 THR A 347 LEU A 350 -1 O LEU A 350 N TYR A 325 SHEET 1 C 2 PHE A 352 LYS A 353 0 SHEET 2 C 2 LYS A 356 PRO A 357 -1 O LYS A 356 N LYS A 353 SHEET 1 D 2 ASP A 399 SER A 400 0 SHEET 2 D 2 SER A 458 ARG A 459 -1 O ARG A 459 N ASP A 399 SHEET 1 E 2 TYR A 463 VAL A 465 0 SHEET 2 E 2 ARG A 473 PRO A 475 -1 O TYR A 474 N PHE A 464 SSBOND 1 CYS A 197 CYS A 205 1555 1555 2.03 LINK OE1AGLU A 394 C1 AGLC A 501 1555 1555 1.37 CISPEP 1 ALA A 193 PRO A 194 0 7.02 CISPEP 2 TRP A 444 SER A 445 0 7.25 SITE 1 AC1 12 GLN A 31 HIS A 132 ASN A 177 GLN A 178 SITE 2 AC1 12 TYR A 321 TRP A 366 GLU A 394 TRP A 444 SITE 3 AC1 12 GLU A 451 TRP A 452 PHE A 460 GOL A 504 SITE 1 AC2 9 GLN A 31 HIS A 132 ASN A 177 GLN A 178 SITE 2 AC2 9 GLU A 394 TRP A 444 GLU A 451 TRP A 452 SITE 3 AC2 9 GOL A 504 CRYST1 57.047 91.215 111.368 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017529 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010963 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008979 0.00000