PDB Short entry for 3WBX HEADER OXIDOREDUCTASE 22-MAY-13 3WBX TITLE CRYSTAL STRUCTURE OF GOX0644 AT APOFORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GLUCONOBACTER OXYDANS; SOURCE 3 ORGANISM_TAXID: 290633; SOURCE 4 STRAIN: 621H; SOURCE 5 GENE: GOX0644; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALDO-KETO REDUCTASE (AKR), REDUCTASE, NADPH, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.A.YUAN,C.WANG REVDAT 2 20-MAR-24 3WBX 1 REMARK SEQADV REVDAT 1 28-MAY-14 3WBX 0 JRNL AUTH Y.A.YUAN,C.WANG JRNL TITL CRYSTAL STRUCTURE OF GOX0644 AT APOFORM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 20012 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1084 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1469 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 79 REMARK 3 BIN FREE R VALUE : 0.3860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4366 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 214 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.79000 REMARK 3 B22 (A**2) : 1.06000 REMARK 3 B33 (A**2) : -1.85000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.931 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.354 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.234 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.582 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.843 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4480 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6068 ; 1.285 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 540 ; 5.665 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 224 ;35.295 ;23.929 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 794 ;16.219 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;18.158 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 652 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3422 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2092 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2975 ; 0.296 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 242 ; 0.143 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.189 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.230 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2811 ; 0.462 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4370 ; 0.743 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1930 ; 1.170 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1698 ; 1.829 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 9 A 279 4 REMARK 3 1 B 9 B 279 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2183 ; 0.43 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 2183 ; 0.46 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 279 REMARK 3 ORIGIN FOR THE GROUP (A): 12.1440 2.9862 8.8691 REMARK 3 T TENSOR REMARK 3 T11: -0.1004 T22: -0.1154 REMARK 3 T33: -0.1254 T12: -0.0188 REMARK 3 T13: -0.0142 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.9682 L22: 1.0681 REMARK 3 L33: 1.4304 L12: -0.0501 REMARK 3 L13: -0.0186 L23: 0.3141 REMARK 3 S TENSOR REMARK 3 S11: -0.0675 S12: -0.1117 S13: -0.0998 REMARK 3 S21: 0.1023 S22: 0.0600 S23: 0.0300 REMARK 3 S31: 0.0665 S32: -0.0625 S33: 0.0074 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 9 B 279 REMARK 3 ORIGIN FOR THE GROUP (A): 17.0373 2.2513 40.3566 REMARK 3 T TENSOR REMARK 3 T11: -0.0999 T22: -0.0487 REMARK 3 T33: -0.1022 T12: 0.0092 REMARK 3 T13: 0.0152 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.6704 L22: 2.2167 REMARK 3 L33: 2.1011 L12: -0.0689 REMARK 3 L13: 0.2708 L23: -0.1109 REMARK 3 S TENSOR REMARK 3 S11: 0.0582 S12: -0.0174 S13: 0.0093 REMARK 3 S21: 0.0568 S22: -0.0518 S23: 0.1537 REMARK 3 S31: 0.0695 S32: 0.0673 S33: -0.0064 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3WBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000096141. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : 360 DEGREE COLLECTION, 1 DEGREE REMARK 200 OSCILLATION REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 70 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24246 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, LISSO4, BIS-TRIS, PH 6.3, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.93950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.79250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.89000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.79250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.93950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.89000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 GLN A 4 REMARK 465 VAL A 5 REMARK 465 PRO A 6 REMARK 465 SER A 7 REMARK 465 ALA A 8 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 GLN B 4 REMARK 465 VAL B 5 REMARK 465 PRO B 6 REMARK 465 SER B 7 REMARK 465 ALA B 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 401 O HOH A 512 1455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 31 51.17 -98.88 REMARK 500 PRO A 34 -31.13 -34.84 REMARK 500 LYS A 196 9.92 56.92 REMARK 500 TRP B 30 -40.63 -130.90 REMARK 500 ASP B 70 1.88 83.38 REMARK 500 SER B 235 130.44 176.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WBW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GOX0644 IN COMPLEX WITH NADPH REMARK 900 RELATED ID: 3WBY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GOX0644 D53A MUTANT IN COMPLEX WITH NADPH DBREF 3WBX A 1 279 UNP Q5FT75 Q5FT75_GLUOX 1 279 DBREF 3WBX B 1 279 UNP Q5FT75 Q5FT75_GLUOX 1 279 SEQADV 3WBX GLY A -2 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBX SER A -1 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBX HIS A 0 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBX GLY B -2 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBX SER B -1 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBX HIS B 0 UNP Q5FT75 EXPRESSION TAG SEQRES 1 A 282 GLY SER HIS MET SER SER GLN VAL PRO SER ALA GLU ALA SEQRES 2 A 282 GLN THR VAL ILE SER PHE HIS ASP GLY HIS THR MET PRO SEQRES 3 A 282 GLN ILE GLY LEU GLY VAL TRP GLU THR PRO PRO ASP GLU SEQRES 4 A 282 THR ALA GLU VAL VAL LYS GLU ALA VAL LYS LEU GLY TYR SEQRES 5 A 282 ARG SER VAL ASP THR ALA ARG LEU TYR LYS ASN GLU GLU SEQRES 6 A 282 GLY VAL GLY LYS GLY LEU GLU ASP HIS PRO GLU ILE PHE SEQRES 7 A 282 LEU THR THR LYS LEU TRP ASN ASP GLU GLN GLY TYR ASP SEQRES 8 A 282 SER THR LEU ARG ALA TYR GLU GLU SER ALA ARG LEU LEU SEQRES 9 A 282 ARG ARG PRO VAL LEU ASP LEU TYR LEU ILE HIS TRP PRO SEQRES 10 A 282 MET PRO ALA GLN GLY GLN TYR VAL GLU THR TRP LYS ALA SEQRES 11 A 282 LEU VAL GLU LEU LYS LYS SER GLY ARG VAL LYS SER ILE SEQRES 12 A 282 GLY VAL SER ASN PHE GLU SER GLU HIS LEU GLU ARG ILE SEQRES 13 A 282 MET ASP ALA THR GLY VAL VAL PRO VAL VAL ASN GLN ILE SEQRES 14 A 282 GLU LEU HIS PRO ASP PHE GLN GLN ARG ALA LEU ARG GLU SEQRES 15 A 282 PHE HIS GLU LYS HIS ASN ILE ARG THR GLU SER TRP ARG SEQRES 16 A 282 PRO LEU GLY LYS GLY ARG VAL LEU SER ASP GLU ARG ILE SEQRES 17 A 282 GLY LYS ILE ALA GLU LYS HIS SER ARG THR PRO ALA GLN SEQRES 18 A 282 VAL VAL ILE ARG TRP HIS LEU GLN ASN GLY LEU ILE VAL SEQRES 19 A 282 ILE PRO LYS SER VAL ASN PRO LYS ARG LEU ALA GLU ASN SEQRES 20 A 282 LEU ASP VAL PHE GLY PHE VAL LEU ASP ALA ASP ASP MET SEQRES 21 A 282 GLN ALA ILE GLU GLN MET ASP ARG LYS ASP GLY ARG MET SEQRES 22 A 282 GLY ALA ASP PRO ASN THR ALA LYS PHE SEQRES 1 B 282 GLY SER HIS MET SER SER GLN VAL PRO SER ALA GLU ALA SEQRES 2 B 282 GLN THR VAL ILE SER PHE HIS ASP GLY HIS THR MET PRO SEQRES 3 B 282 GLN ILE GLY LEU GLY VAL TRP GLU THR PRO PRO ASP GLU SEQRES 4 B 282 THR ALA GLU VAL VAL LYS GLU ALA VAL LYS LEU GLY TYR SEQRES 5 B 282 ARG SER VAL ASP THR ALA ARG LEU TYR LYS ASN GLU GLU SEQRES 6 B 282 GLY VAL GLY LYS GLY LEU GLU ASP HIS PRO GLU ILE PHE SEQRES 7 B 282 LEU THR THR LYS LEU TRP ASN ASP GLU GLN GLY TYR ASP SEQRES 8 B 282 SER THR LEU ARG ALA TYR GLU GLU SER ALA ARG LEU LEU SEQRES 9 B 282 ARG ARG PRO VAL LEU ASP LEU TYR LEU ILE HIS TRP PRO SEQRES 10 B 282 MET PRO ALA GLN GLY GLN TYR VAL GLU THR TRP LYS ALA SEQRES 11 B 282 LEU VAL GLU LEU LYS LYS SER GLY ARG VAL LYS SER ILE SEQRES 12 B 282 GLY VAL SER ASN PHE GLU SER GLU HIS LEU GLU ARG ILE SEQRES 13 B 282 MET ASP ALA THR GLY VAL VAL PRO VAL VAL ASN GLN ILE SEQRES 14 B 282 GLU LEU HIS PRO ASP PHE GLN GLN ARG ALA LEU ARG GLU SEQRES 15 B 282 PHE HIS GLU LYS HIS ASN ILE ARG THR GLU SER TRP ARG SEQRES 16 B 282 PRO LEU GLY LYS GLY ARG VAL LEU SER ASP GLU ARG ILE SEQRES 17 B 282 GLY LYS ILE ALA GLU LYS HIS SER ARG THR PRO ALA GLN SEQRES 18 B 282 VAL VAL ILE ARG TRP HIS LEU GLN ASN GLY LEU ILE VAL SEQRES 19 B 282 ILE PRO LYS SER VAL ASN PRO LYS ARG LEU ALA GLU ASN SEQRES 20 B 282 LEU ASP VAL PHE GLY PHE VAL LEU ASP ALA ASP ASP MET SEQRES 21 B 282 GLN ALA ILE GLU GLN MET ASP ARG LYS ASP GLY ARG MET SEQRES 22 B 282 GLY ALA ASP PRO ASN THR ALA LYS PHE HET SO4 A 301 5 HET SO4 B 301 5 HET SO4 B 302 5 HET SO4 B 303 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *214(H2 O) HELIX 1 1 GLU A 36 GLY A 48 1 13 HELIX 2 2 ALA A 55 LYS A 59 5 5 HELIX 3 3 ASN A 60 LEU A 68 1 9 HELIX 4 4 TRP A 81 GLN A 85 5 5 HELIX 5 5 GLY A 86 LEU A 101 1 16 HELIX 6 6 MET A 115 GLY A 119 5 5 HELIX 7 7 GLN A 120 SER A 134 1 15 HELIX 8 8 GLU A 146 GLY A 158 1 13 HELIX 9 9 GLN A 174 HIS A 184 1 11 HELIX 10 10 LEU A 194 SER A 201 5 8 HELIX 11 11 ASP A 202 SER A 213 1 12 HELIX 12 12 THR A 215 ASN A 227 1 13 HELIX 13 13 ASN A 237 ASP A 246 1 10 HELIX 14 14 ASP A 253 GLN A 262 1 10 HELIX 15 15 GLU B 36 GLY B 48 1 13 HELIX 16 16 ASN B 60 LEU B 68 1 9 HELIX 17 17 TRP B 81 GLN B 85 5 5 HELIX 18 18 GLY B 86 LEU B 101 1 16 HELIX 19 19 GLN B 120 SER B 134 1 15 HELIX 20 20 GLU B 146 GLY B 158 1 13 HELIX 21 21 GLN B 174 HIS B 184 1 11 HELIX 22 22 LEU B 194 SER B 201 5 8 HELIX 23 23 ASP B 202 SER B 213 1 12 HELIX 24 24 THR B 215 ASN B 227 1 13 HELIX 25 25 ASN B 237 ASN B 244 1 8 HELIX 26 26 ASP B 253 GLN B 262 1 10 SHEET 1 A 2 VAL A 13 SER A 15 0 SHEET 2 A 2 THR A 21 PRO A 23 -1 O MET A 22 N ILE A 14 SHEET 1 B 8 LEU A 27 GLY A 28 0 SHEET 2 B 8 SER A 51 ASP A 53 1 O ASP A 53 N LEU A 27 SHEET 3 B 8 PHE A 75 LEU A 80 1 O PHE A 75 N VAL A 52 SHEET 4 B 8 LEU A 106 ILE A 111 1 O LEU A 110 N LEU A 80 SHEET 5 B 8 VAL A 137 SER A 143 1 O LYS A 138 N LEU A 106 SHEET 6 B 8 VAL A 163 GLU A 167 1 O VAL A 163 N VAL A 142 SHEET 7 B 8 ARG A 187 TRP A 191 1 O GLU A 189 N ILE A 166 SHEET 8 B 8 ILE A 230 VAL A 231 1 O ILE A 230 N SER A 190 SHEET 1 C 2 VAL B 13 SER B 15 0 SHEET 2 C 2 THR B 21 PRO B 23 -1 O MET B 22 N ILE B 14 SHEET 1 D 8 LEU B 27 GLY B 28 0 SHEET 2 D 8 SER B 51 ASP B 53 1 O ASP B 53 N LEU B 27 SHEET 3 D 8 PHE B 75 LEU B 80 1 O PHE B 75 N VAL B 52 SHEET 4 D 8 LEU B 106 ILE B 111 1 O LEU B 110 N LEU B 80 SHEET 5 D 8 VAL B 137 SER B 143 1 O GLY B 141 N TYR B 109 SHEET 6 D 8 VAL B 163 GLU B 167 1 O VAL B 163 N VAL B 142 SHEET 7 D 8 ARG B 187 TRP B 191 1 O ARG B 187 N ASN B 164 SHEET 8 D 8 ILE B 230 VAL B 231 1 O ILE B 230 N THR B 188 SITE 1 AC1 6 ARG A 192 PRO A 193 LEU A 194 GLY A 195 SITE 2 AC1 6 LYS A 196 LYS A 234 SITE 1 AC2 5 ARG A 192 HIS B 20 THR B 21 HOH B 417 SITE 2 AC2 5 HOH B 477 SITE 1 AC3 6 HIS A 20 THR A 21 HOH A 434 GLU B 31 SITE 2 AC3 6 ARG B 192 HOH B 415 SITE 1 AC4 7 ARG B 192 PRO B 193 LEU B 194 GLY B 195 SITE 2 AC4 7 LYS B 196 LYS B 234 HOH B 471 CRYST1 55.879 75.780 125.585 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017896 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013196 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007963 0.00000