PDB Short entry for 4A8S HEADER TRANSFERASE/DNA 21-NOV-11 4A8S TITLE NON-CATALYTIC IONS DIRECT THE RNA-DEPENDENT RNA POLYMERASE OF TITLE 2 BACTERIAL DSRNA VIRUS PHI6 FROM DE NOVO INITIATION TO ELONGATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: PROTEIN P2, P2 POLYMERASE; COMPND 5 EC: 2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*TP*TP*TP*TP*CP*GP*CP*GP*TP*AP*GP*CP*GP)-3'; COMPND 10 CHAIN: F, G, H; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PHAGE PHI6; SOURCE 3 ORGANISM_TAXID: 10879; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630 KEYWDS TRANSFERASE-DNA COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.WRIGHT,M.M.PORANEN,D.H.BAMFORD,D.I.STUART,J.M.GRIMES REVDAT 2 20-DEC-23 4A8S 1 REMARK LINK REVDAT 1 04-JUL-12 4A8S 0 JRNL AUTH S.WRIGHT,M.M.PORANEN,D.H.BAMFORD,D.I.STUART,J.M.GRIMES JRNL TITL NONCATALYTIC IONS DIRECT THE RNA-DEPENDENT RNA POLYMERASE OF JRNL TITL 2 BACTERIAL DOUBLE-STRANDED RNA VIRUS PHI6 FROM DE NOVO JRNL TITL 3 INITIATION TO ELONGATION. JRNL REF J.VIROL. V. 86 2837 2012 JRNL REFN ISSN 0022-538X JRNL PMID 22205747 JRNL DOI 10.1128/JVI.05168-11 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.9.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 53948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2742 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.98 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 68 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3739 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 64 REMARK 3 BIN R VALUE (WORKING SET) : 0.3645 REMARK 3 BIN FREE R VALUE : 0.5198 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.88 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 4 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15653 REMARK 3 NUCLEIC ACID ATOMS : 259 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 1 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 139.0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 97.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.56380 REMARK 3 B22 (A**2) : -40.34910 REMARK 3 B33 (A**2) : 34.78530 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 9.30710 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.886 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.847 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 16365 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 22194 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 5755 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 379 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 2360 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 16365 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 2024 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 17908 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.79 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.15 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESIDUES 1-664) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0146 0.7741 28.6878 REMARK 3 T TENSOR REMARK 3 T11: -0.1355 T22: -0.0751 REMARK 3 T33: -0.1278 T12: 0.0532 REMARK 3 T13: -0.0340 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 0.9310 L22: 0.1833 REMARK 3 L33: 0.8833 L12: 0.2356 REMARK 3 L13: 0.3714 L23: 0.1066 REMARK 3 S TENSOR REMARK 3 S11: -0.0221 S12: 0.1164 S13: 0.0749 REMARK 3 S21: -0.0351 S22: 0.0879 S23: 0.0206 REMARK 3 S31: 0.0401 S32: 0.0045 S33: -0.0658 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESIDUES 1-664) REMARK 3 ORIGIN FOR THE GROUP (A): 58.7364 20.9039 56.4285 REMARK 3 T TENSOR REMARK 3 T11: -0.2051 T22: 0.2399 REMARK 3 T33: -0.2210 T12: 0.0959 REMARK 3 T13: -0.0040 T23: -0.1312 REMARK 3 L TENSOR REMARK 3 L11: 0.4320 L22: 0.4841 REMARK 3 L33: 0.9814 L12: 0.2206 REMARK 3 L13: 0.5774 L23: 0.4641 REMARK 3 S TENSOR REMARK 3 S11: 0.0161 S12: 0.1753 S13: -0.0683 REMARK 3 S21: 0.0758 S22: 0.0647 S23: 0.0005 REMARK 3 S31: 0.0046 S32: 0.1965 S33: -0.0808 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN C AND RESIDUES 1-664) REMARK 3 ORIGIN FOR THE GROUP (A): -43.2230 2.7658 -3.6698 REMARK 3 T TENSOR REMARK 3 T11: -0.0411 T22: 0.0176 REMARK 3 T33: -0.2107 T12: 0.1287 REMARK 3 T13: -0.0734 T23: -0.1123 REMARK 3 L TENSOR REMARK 3 L11: 0.8060 L22: 0.2661 REMARK 3 L33: 1.7101 L12: 0.0304 REMARK 3 L13: -0.5478 L23: 0.4912 REMARK 3 S TENSOR REMARK 3 S11: 0.0422 S12: 0.0863 S13: 0.0666 REMARK 3 S21: -0.0112 S22: -0.1216 S23: -0.0447 REMARK 3 S31: -0.1456 S32: -0.3998 S33: 0.0794 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DISORDERED REGIONS WERE MODELED STEREO- REMARK 3 RESTRAINT LSSR (-AUTONCS).IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 R RESIDUE TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY=MG ATP. NUMBER REMARK 3 OF ATOMS WITH PROPER CCP4 ATOM TYPE=15913. NUMBER WITH APPROX REMARK 3 DEFAULT CCP4 ATOM TYPE=39. NUMBER TREATED BY BAD NON-BONDED REMARK 3 CONTACTS=3. REMARK 4 REMARK 4 4A8S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1290050403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53974 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 77.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : 0.19000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.98 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1HHS REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG 20000, 100 MM MES (PH 6.5) REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.85500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 635 TO GLN REMARK 400 ENGINEERED RESIDUE IN CHAIN B, GLU 635 TO GLN REMARK 400 ENGINEERED RESIDUE IN CHAIN C, GLU 635 TO GLN REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET B 0 REMARK 465 MET C 0 REMARK 465 ARG C 607 REMARK 465 GLN C 608 REMARK 465 ALA C 609 REMARK 465 GLY C 610 REMARK 465 LEU C 611 REMARK 465 LYS C 631 REMARK 465 TRP C 632 REMARK 465 THR C 633 REMARK 465 GLN C 634 REMARK 465 ALA C 635 REMARK 465 ASP C 636 REMARK 465 VAL C 637 REMARK 465 SER C 638 REMARK 465 ALA C 639 REMARK 465 ASN C 640 REMARK 465 ILE C 641 REMARK 465 HIS C 642 REMARK 465 GLU C 643 REMARK 465 DT F 1 REMARK 465 DT F 2 REMARK 465 DT F 3 REMARK 465 DT F 4 REMARK 465 DC F 5 REMARK 465 DT F 9 REMARK 465 DA F 10 REMARK 465 DG F 11 REMARK 465 DC F 12 REMARK 465 DG F 13 REMARK 465 DT G 1 REMARK 465 DT G 2 REMARK 465 DT G 3 REMARK 465 DT G 4 REMARK 465 DC G 5 REMARK 465 DG G 6 REMARK 465 DC G 7 REMARK 465 DG G 8 REMARK 465 DT G 9 REMARK 465 DC H 7 REMARK 465 DG H 8 REMARK 465 DT H 9 REMARK 465 DA H 10 REMARK 465 DG H 11 REMARK 465 DC H 12 REMARK 465 DG H 13 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DG F 6 P OP1 OP2 REMARK 470 DA G 10 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG F 6 O4' - C1' - N9 ANGL. DEV. = 5.4 DEGREES REMARK 500 DG F 6 C8 - N9 - C4 ANGL. DEV. = -2.5 DEGREES REMARK 500 DC F 7 O4' - C1' - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DC G 12 O4' - C1' - N1 ANGL. DEV. = 5.5 DEGREES REMARK 500 DC G 12 C3' - O3' - P ANGL. DEV. = 9.1 DEGREES REMARK 500 DT H 1 O4' - C1' - N1 ANGL. DEV. = 9.9 DEGREES REMARK 500 DT H 1 C3' - O3' - P ANGL. DEV. = 13.2 DEGREES REMARK 500 DT H 2 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT H 3 O4' - C1' - N1 ANGL. DEV. = 5.4 DEGREES REMARK 500 DT H 3 N3 - C2 - O2 ANGL. DEV. = -5.2 DEGREES REMARK 500 DT H 3 C3' - O3' - P ANGL. DEV. = 13.2 DEGREES REMARK 500 DT H 4 C1' - O4' - C4' ANGL. DEV. = -6.1 DEGREES REMARK 500 DT H 4 O4' - C1' - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 DC H 5 O4' - C1' - N1 ANGL. DEV. = 6.1 DEGREES REMARK 500 DC H 5 N1 - C2 - O2 ANGL. DEV. = 4.0 DEGREES REMARK 500 DC H 5 C2 - N1 - C1' ANGL. DEV. = 6.8 DEGREES REMARK 500 DG H 6 O4' - C1' - N9 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 2 104.42 70.94 REMARK 500 ASN A 68 77.98 -118.74 REMARK 500 SER A 136 -86.58 -73.95 REMARK 500 CYS A 152 -140.08 49.68 REMARK 500 SER A 296 -69.95 -102.07 REMARK 500 THR A 305 -88.43 -115.70 REMARK 500 ASP A 386 19.29 -144.61 REMARK 500 THR A 418 -32.86 -134.39 REMARK 500 SER A 452 -117.95 50.03 REMARK 500 ASP A 504 -161.60 -104.86 REMARK 500 ARG A 607 -32.29 -28.99 REMARK 500 GLN A 608 51.42 -147.21 REMARK 500 TYR A 630 -24.70 -146.13 REMARK 500 ARG B 2 110.61 74.32 REMARK 500 ASN B 68 76.92 -117.90 REMARK 500 SER B 136 -92.00 -74.37 REMARK 500 CYS B 152 -142.19 49.65 REMARK 500 LYS B 185 59.96 -96.53 REMARK 500 GLN B 206 98.08 -67.15 REMARK 500 THR B 305 -87.25 -121.41 REMARK 500 ASP B 327 70.49 27.44 REMARK 500 PRO B 364 170.99 -55.99 REMARK 500 ASP B 386 20.97 -143.92 REMARK 500 GLU B 388 57.88 -111.62 REMARK 500 SER B 393 -32.44 -39.07 REMARK 500 THR B 418 -37.80 -132.34 REMARK 500 SER B 452 -117.96 49.88 REMARK 500 ASP B 504 -151.47 -100.42 REMARK 500 ARG B 607 -9.82 -45.32 REMARK 500 ALA B 609 -53.54 -128.25 REMARK 500 ALA B 612 -60.83 -24.01 REMARK 500 TYR B 630 -13.71 -150.43 REMARK 500 LYS B 631 -50.52 -126.87 REMARK 500 ARG C 2 102.68 72.26 REMARK 500 ASN C 68 77.19 -117.18 REMARK 500 SER C 136 -114.08 -72.35 REMARK 500 CYS C 152 -141.03 48.71 REMARK 500 SER C 296 -69.54 -99.49 REMARK 500 THR C 305 -89.73 -121.12 REMARK 500 PRO C 364 170.23 -55.75 REMARK 500 ASP C 386 21.91 -144.26 REMARK 500 GLU C 388 56.11 -115.00 REMARK 500 SER C 393 -32.14 -36.91 REMARK 500 THR C 418 -37.43 -132.04 REMARK 500 LYS C 451 106.77 -162.12 REMARK 500 SER C 452 -119.54 55.98 REMARK 500 ASP C 504 -149.86 -100.36 REMARK 500 THR C 557 -72.57 -73.92 REMARK 500 PRO C 625 3.85 -61.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ATP A 1666 REMARK 610 ATP B 1666 REMARK 610 ATP C 1665 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1665 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 454 OD1 REMARK 620 2 GLU A 491 OE1 121.7 REMARK 620 3 ALA A 495 O 82.3 64.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1665 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 454 OD1 REMARK 620 2 GLU B 491 OE1 166.4 REMARK 620 3 ALA B 495 O 87.8 81.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1665 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 1666 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1667 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1665 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 1666 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP C 1665 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JLG RELATED DB: PDB REMARK 900 STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1UVN RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1UVJ RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1HHT RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 TEMPLATE REMARK 900 RELATED ID: 2JL9 RELATED DB: PDB REMARK 900 STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 2JLF RELATED DB: PDB REMARK 900 STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 4A8F RELATED DB: PDB REMARK 900 NON-CATALYTIC IONS DIRECT THE RNA-DEPENDENT RNA POLYMERASE OF REMARK 900 BACTERIAL DSRNA VIRUS PHI6 FROM DE NOVO INITIATION TO ELONGATION REMARK 900 RELATED ID: 1HI1 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 BOUND NTP REMARK 900 RELATED ID: 1WAC RELATED DB: PDB REMARK 900 BACK-PRIMING MODE OF PHI6 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1UVM RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 4A8K RELATED DB: PDB REMARK 900 NON-CATALYTIC IONS DIRECT THE RNA-DEPENDENT RNA POLYMERASE OF REMARK 900 BACTERIAL DSRNA VIRUS PHI6 FROM DE NOVO INITIATION TO ELONGATION REMARK 900 RELATED ID: 1UVK RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1HHS RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 REMARK 900 RELATED ID: 1HI0 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 PLUS REMARK 900 INITIATION COMPLEX REMARK 900 RELATED ID: 1UVI RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1UVL RELATED DB: PDB REMARK 900 THE STRUCTURAL BASIS FOR RNA SPECIFICITY AND CA2+ INHIBITION OF AN REMARK 900 RNA-DEPENDENT RNA POLYMERASE REMARK 900 RELATED ID: 1HI8 RELATED DB: PDB REMARK 900 RNA DEPENDENT RNA POLYMERASE FROM DSRNA BACTERIOPHAGE PHI6 REMARK 900 RELATED ID: 4A8Y RELATED DB: PDB REMARK 900 NON-CATALYTIC IONS DIRECT THE RNA-DEPENDENT RNA POLYMERASE OF REMARK 900 BACTERIAL DSRNA VIRUS PHI6 FROM DE NOVO INITIATION TO ELONGATION REMARK 900 RELATED ID: 4A8W RELATED DB: PDB REMARK 900 NON-CATALYTIC IONS DIRECT THE RNA-DEPENDENT RNA POLYMERASE OF REMARK 900 BACTERIAL DSRNA VIRUS PHI6 FROM DE NOVO INITIATION TO ELONGATION REMARK 900 RELATED ID: 4A8Q RELATED DB: PDB REMARK 900 NON-CATALYTIC IONS DIRECT THE RNA-DEPENDENT RNA POLYMERASE OF REMARK 900 BACTERIAL DSRNA VIRUS PHI6 FROM DE NOVO INITIATION TO ELONGATION REMARK 900 RELATED ID: 4A8M RELATED DB: PDB REMARK 900 NON-CATALYTIC IONS DIRECT THE RNA-DEPENDENT RNA POLYMERASE OF REMARK 900 BACTERIAL DSRNA VIRUS PHI6 FROM DE NOVO INITIATION TO ELONGATION REMARK 900 RELATED ID: 4A8O RELATED DB: PDB REMARK 900 NON-CATALYTIC IONS DIRECT THE RNA-DEPENDENT RNA POLYMERASE OF REMARK 900 BACTERIAL DSRNA VIRUS PHI6 FROM DE NOVO INITIATION TO ELONGATION REMARK 999 REMARK 999 SEQUENCE REMARK 999 SYNTHETIC SEQUENCE TO FORM A HAIRPIN WITH A 4 BASE REMARK 999 OVERHANG REMARK 999 THE MET 465 (ILE 457) CONFLICT IS OWING TO A SEQUENCE REMARK 999 DIFFERENCE (CONFIRMED EXPERIMENTALLY) FROM THAT IN REMARK 999 THE UNIPROT ENTRY. DBREF 4A8S A 0 664 UNP P11124 RDRP_BPPH6 1 665 DBREF 4A8S B 0 664 UNP P11124 RDRP_BPPH6 1 665 DBREF 4A8S C 0 664 UNP P11124 RDRP_BPPH6 1 665 DBREF 4A8S F 1 13 PDB 4A8S 4A8S 1 13 DBREF 4A8S G 1 13 PDB 4A8S 4A8S 1 13 DBREF 4A8S H 1 13 PDB 4A8S 4A8S 1 13 SEQADV 4A8S MET A 456 UNP P11124 ILE 457 CONFLICT SEQADV 4A8S GLN A 634 UNP P11124 GLU 635 ENGINEERED MUTATION SEQADV 4A8S MET B 456 UNP P11124 ILE 457 CONFLICT SEQADV 4A8S GLN B 634 UNP P11124 GLU 635 ENGINEERED MUTATION SEQADV 4A8S MET C 456 UNP P11124 ILE 457 CONFLICT SEQADV 4A8S GLN C 634 UNP P11124 GLU 635 ENGINEERED MUTATION SEQRES 1 A 665 MET PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE SEQRES 2 A 665 LYS ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN SEQRES 3 A 665 GLN ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU SEQRES 4 A 665 THR TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SEQRES 5 A 665 SER PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS SEQRES 6 A 665 PHE PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY SEQRES 7 A 665 ASN GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET SEQRES 8 A 665 ASN GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SEQRES 9 A 665 SER ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP SEQRES 10 A 665 GLY PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA SEQRES 11 A 665 ALA VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO SEQRES 12 A 665 LEU LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR SEQRES 13 A 665 PHE SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU SEQRES 14 A 665 ARG ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET SEQRES 15 A 665 LEU GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN SEQRES 16 A 665 MET GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER SEQRES 17 A 665 THR ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE SEQRES 18 A 665 VAL SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA SEQRES 19 A 665 VAL THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER SEQRES 20 A 665 LYS ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP SEQRES 21 A 665 VAL PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA SEQRES 22 A 665 MET GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA SEQRES 23 A 665 VAL ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR SEQRES 24 A 665 ALA TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU SEQRES 25 A 665 GLU LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP SEQRES 26 A 665 VAL SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG SEQRES 27 A 665 ASP LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA SEQRES 28 A 665 PRO TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU SEQRES 29 A 665 PRO VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS SEQRES 30 A 665 THR LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL SEQRES 31 A 665 GLY LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY SEQRES 32 A 665 THR LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU SEQRES 33 A 665 ASP HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP SEQRES 34 A 665 MET PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN SEQRES 35 A 665 GLY HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP SEQRES 36 A 665 ALA MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY SEQRES 37 A 665 GLY HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL SEQRES 38 A 665 ASN PRO SER PRO TYR MET LYS ILE SER TYR GLU HIS GLY SEQRES 39 A 665 GLY ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG SEQRES 40 A 665 ARG GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SEQRES 41 A 665 SER MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL SEQRES 42 A 665 GLN SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO SEQRES 43 A 665 PHE PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR SEQRES 44 A 665 GLY ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE SEQRES 45 A 665 GLU ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG SEQRES 46 A 665 ALA TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU SEQRES 47 A 665 LEU SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY SEQRES 48 A 665 LEU ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA SEQRES 49 A 665 ASP PRO ASN LYS LEU GLN TYR LYS TRP THR GLN ALA ASP SEQRES 50 A 665 VAL SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SEQRES 51 A 665 SER VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET SEQRES 52 A 665 PRO ARG SEQRES 1 B 665 MET PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE SEQRES 2 B 665 LYS ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN SEQRES 3 B 665 GLN ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU SEQRES 4 B 665 THR TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SEQRES 5 B 665 SER PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS SEQRES 6 B 665 PHE PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY SEQRES 7 B 665 ASN GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET SEQRES 8 B 665 ASN GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SEQRES 9 B 665 SER ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP SEQRES 10 B 665 GLY PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA SEQRES 11 B 665 ALA VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO SEQRES 12 B 665 LEU LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR SEQRES 13 B 665 PHE SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU SEQRES 14 B 665 ARG ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET SEQRES 15 B 665 LEU GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN SEQRES 16 B 665 MET GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER SEQRES 17 B 665 THR ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE SEQRES 18 B 665 VAL SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA SEQRES 19 B 665 VAL THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER SEQRES 20 B 665 LYS ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP SEQRES 21 B 665 VAL PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA SEQRES 22 B 665 MET GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA SEQRES 23 B 665 VAL ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR SEQRES 24 B 665 ALA TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU SEQRES 25 B 665 GLU LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP SEQRES 26 B 665 VAL SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG SEQRES 27 B 665 ASP LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA SEQRES 28 B 665 PRO TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU SEQRES 29 B 665 PRO VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS SEQRES 30 B 665 THR LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL SEQRES 31 B 665 GLY LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY SEQRES 32 B 665 THR LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU SEQRES 33 B 665 ASP HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP SEQRES 34 B 665 MET PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN SEQRES 35 B 665 GLY HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP SEQRES 36 B 665 ALA MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY SEQRES 37 B 665 GLY HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL SEQRES 38 B 665 ASN PRO SER PRO TYR MET LYS ILE SER TYR GLU HIS GLY SEQRES 39 B 665 GLY ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG SEQRES 40 B 665 ARG GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SEQRES 41 B 665 SER MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL SEQRES 42 B 665 GLN SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO SEQRES 43 B 665 PHE PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR SEQRES 44 B 665 GLY ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE SEQRES 45 B 665 GLU ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG SEQRES 46 B 665 ALA TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU SEQRES 47 B 665 LEU SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY SEQRES 48 B 665 LEU ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA SEQRES 49 B 665 ASP PRO ASN LYS LEU GLN TYR LYS TRP THR GLN ALA ASP SEQRES 50 B 665 VAL SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SEQRES 51 B 665 SER VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET SEQRES 52 B 665 PRO ARG SEQRES 1 C 665 MET PRO ARG ARG ALA PRO ALA PHE PRO LEU SER ASP ILE SEQRES 2 C 665 LYS ALA GLN MET LEU PHE ALA ASN ASN ILE LYS ALA GLN SEQRES 3 C 665 GLN ALA SER LYS ARG SER PHE LYS GLU GLY ALA ILE GLU SEQRES 4 C 665 THR TYR GLU GLY LEU LEU SER VAL ASP PRO ARG PHE LEU SEQRES 5 C 665 SER PHE LYS ASN GLU LEU SER ARG TYR LEU THR ASP HIS SEQRES 6 C 665 PHE PRO ALA ASN VAL ASP GLU TYR GLY ARG VAL TYR GLY SEQRES 7 C 665 ASN GLY VAL ARG THR ASN PHE PHE GLY MET ARG HIS MET SEQRES 8 C 665 ASN GLY PHE PRO MET ILE PRO ALA THR TRP PRO LEU ALA SEQRES 9 C 665 SER ASN LEU LYS LYS ARG ALA ASP ALA ASP LEU ALA ASP SEQRES 10 C 665 GLY PRO VAL SER GLU ARG ASP ASN LEU LEU PHE ARG ALA SEQRES 11 C 665 ALA VAL ARG LEU MET PHE SER ASP LEU GLU PRO VAL PRO SEQRES 12 C 665 LEU LYS ILE ARG LYS GLY SER SER THR CYS ILE PRO TYR SEQRES 13 C 665 PHE SER ASN ASP MET GLY THR LYS ILE GLU ILE ALA GLU SEQRES 14 C 665 ARG ALA LEU GLU LYS ALA GLU GLU ALA GLY ASN LEU MET SEQRES 15 C 665 LEU GLN GLY LYS PHE ASP ASP ALA TYR GLN LEU HIS GLN SEQRES 16 C 665 MET GLY GLY ALA TYR TYR VAL VAL TYR ARG ALA GLN SER SEQRES 17 C 665 THR ASP ALA ILE THR LEU ASP PRO LYS THR GLY LYS PHE SEQRES 18 C 665 VAL SER LYS ASP ARG MET VAL ALA ASP PHE GLU TYR ALA SEQRES 19 C 665 VAL THR GLY GLY GLU GLN GLY SER LEU PHE ALA ALA SER SEQRES 20 C 665 LYS ASP ALA SER ARG LEU LYS GLU GLN TYR GLY ILE ASP SEQRES 21 C 665 VAL PRO ASP GLY PHE PHE CYS GLU ARG ARG ARG THR ALA SEQRES 22 C 665 MET GLY GLY PRO PHE ALA LEU ASN ALA PRO ILE MET ALA SEQRES 23 C 665 VAL ALA GLN PRO VAL ARG ASN LYS ILE TYR SER LYS TYR SEQRES 24 C 665 ALA TYR THR PHE HIS HIS THR THR ARG LEU ASN LYS GLU SEQRES 25 C 665 GLU LYS VAL LYS GLU TRP SER LEU CYS VAL ALA THR ASP SEQRES 26 C 665 VAL SER ASP HIS ASP THR PHE TRP PRO GLY TRP LEU ARG SEQRES 27 C 665 ASP LEU ILE CYS ASP GLU LEU LEU ASN MET GLY TYR ALA SEQRES 28 C 665 PRO TRP TRP VAL LYS LEU PHE GLU THR SER LEU LYS LEU SEQRES 29 C 665 PRO VAL TYR VAL GLY ALA PRO ALA PRO GLU GLN GLY HIS SEQRES 30 C 665 THR LEU LEU GLY ASP PRO SER ASN PRO ASP LEU GLU VAL SEQRES 31 C 665 GLY LEU SER SER GLY GLN GLY ALA THR ASP LEU MET GLY SEQRES 32 C 665 THR LEU LEU MET SER ILE THR TYR LEU VAL MET GLN LEU SEQRES 33 C 665 ASP HIS THR ALA PRO HIS LEU ASN SER ARG ILE LYS ASP SEQRES 34 C 665 MET PRO SER ALA CYS ARG PHE LEU ASP SER TYR TRP GLN SEQRES 35 C 665 GLY HIS GLU GLU ILE ARG GLN ILE SER LYS SER ASP ASP SEQRES 36 C 665 ALA MET LEU GLY TRP THR LYS GLY ARG ALA LEU VAL GLY SEQRES 37 C 665 GLY HIS ARG LEU PHE GLU MET LEU LYS GLU GLY LYS VAL SEQRES 38 C 665 ASN PRO SER PRO TYR MET LYS ILE SER TYR GLU HIS GLY SEQRES 39 C 665 GLY ALA PHE LEU GLY ASP ILE LEU LEU TYR ASP SER ARG SEQRES 40 C 665 ARG GLU PRO GLY SER ALA ILE PHE VAL GLY ASN ILE ASN SEQRES 41 C 665 SER MET LEU ASN ASN GLN PHE SER PRO GLU TYR GLY VAL SEQRES 42 C 665 GLN SER GLY VAL ARG ASP ARG SER LYS ARG LYS ARG PRO SEQRES 43 C 665 PHE PRO GLY LEU ALA TRP ALA SER MET LYS ASP THR TYR SEQRES 44 C 665 GLY ALA CYS PRO ILE TYR SER ASP VAL LEU GLU ALA ILE SEQRES 45 C 665 GLU ARG CYS TRP TRP ASN ALA PHE GLY GLU SER TYR ARG SEQRES 46 C 665 ALA TYR ARG GLU ASP MET LEU LYS ARG ASP THR LEU GLU SEQRES 47 C 665 LEU SER ARG TYR VAL ALA SER MET ALA ARG GLN ALA GLY SEQRES 48 C 665 LEU ALA GLU LEU THR PRO ILE ASP LEU GLU VAL LEU ALA SEQRES 49 C 665 ASP PRO ASN LYS LEU GLN TYR LYS TRP THR GLN ALA ASP SEQRES 50 C 665 VAL SER ALA ASN ILE HIS GLU VAL LEU MET HIS GLY VAL SEQRES 51 C 665 SER VAL GLU LYS THR GLU ARG PHE LEU ARG SER VAL MET SEQRES 52 C 665 PRO ARG SEQRES 1 F 13 DT DT DT DT DC DG DC DG DT DA DG DC DG SEQRES 1 G 13 DT DT DT DT DC DG DC DG DT DA DG DC DG SEQRES 1 H 13 DT DT DT DT DC DG DC DG DT DA DG DC DG HET MG A1665 1 HET ATP A1666 13 HET MG A1667 1 HET MG B1665 1 HET ATP B1666 13 HET ATP C1665 13 HETNAM MG MAGNESIUM ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 7 MG 3(MG 2+) FORMUL 8 ATP 3(C10 H16 N5 O13 P3) FORMUL 13 HOH *(H2 O) HELIX 1 1 ASP A 11 MET A 16 1 6 HELIX 2 2 ASN A 21 ARG A 30 1 10 HELIX 3 3 ASP A 47 PHE A 65 1 19 HELIX 4 4 PHE A 84 MET A 87 5 4 HELIX 5 5 ASN A 105 ALA A 112 1 8 HELIX 6 6 SER A 120 SER A 136 1 17 HELIX 7 7 ASP A 159 GLN A 183 1 25 HELIX 8 8 LYS A 185 GLN A 194 1 10 HELIX 9 9 ASP A 229 THR A 235 1 7 HELIX 10 10 SER A 250 GLY A 257 1 8 HELIX 11 11 PRO A 276 LYS A 297 1 22 HELIX 12 12 TYR A 298 HIS A 303 1 6 HELIX 13 13 THR A 306 GLU A 316 1 11 HELIX 14 14 ASP A 327 TRP A 332 1 6 HELIX 15 15 PRO A 333 GLY A 348 1 16 HELIX 16 16 ALA A 350 LEU A 361 1 12 HELIX 17 17 ALA A 397 THR A 418 1 22 HELIX 18 18 ALA A 419 ILE A 426 5 8 HELIX 19 19 ASP A 428 GLN A 441 1 14 HELIX 20 20 ALA A 464 GLY A 478 1 15 HELIX 21 21 GLU A 508 ALA A 512 5 5 HELIX 22 22 ASN A 517 SER A 527 1 11 HELIX 23 23 ASP A 538 ARG A 542 5 5 HELIX 24 24 PHE A 546 GLY A 548 5 3 HELIX 25 25 LEU A 549 GLY A 559 1 11 HELIX 26 26 ILE A 563 GLY A 580 1 18 HELIX 27 27 SER A 582 SER A 599 1 18 HELIX 28 28 THR A 615 ASP A 624 1 10 HELIX 29 29 PRO A 625 GLN A 629 5 5 HELIX 30 30 THR A 633 VAL A 637 5 5 HELIX 31 31 SER A 638 LEU A 645 1 8 HELIX 32 32 SER A 650 MET A 662 1 13 HELIX 33 33 ASP B 11 MET B 16 1 6 HELIX 34 34 ASN B 21 ARG B 30 1 10 HELIX 35 35 ASP B 47 PHE B 65 1 19 HELIX 36 36 PHE B 84 MET B 87 5 4 HELIX 37 37 ASN B 105 ALA B 112 1 8 HELIX 38 38 SER B 120 SER B 136 1 17 HELIX 39 39 ASP B 159 GLN B 183 1 25 HELIX 40 40 LYS B 185 GLN B 194 1 10 HELIX 41 41 ASP B 229 THR B 235 1 7 HELIX 42 42 SER B 250 GLY B 257 1 8 HELIX 43 43 PRO B 276 TYR B 295 1 20 HELIX 44 44 TYR B 298 HIS B 303 1 6 HELIX 45 45 THR B 306 GLU B 316 1 11 HELIX 46 46 ASP B 327 TRP B 332 1 6 HELIX 47 47 PRO B 333 GLY B 348 1 16 HELIX 48 48 ALA B 350 LEU B 361 1 12 HELIX 49 49 ALA B 397 THR B 418 1 22 HELIX 50 50 ALA B 419 ILE B 426 5 8 HELIX 51 51 ASP B 428 GLN B 441 1 14 HELIX 52 52 ALA B 464 GLY B 478 1 15 HELIX 53 53 GLU B 508 ALA B 512 5 5 HELIX 54 54 ASN B 517 SER B 527 1 11 HELIX 55 55 ASP B 538 ARG B 542 5 5 HELIX 56 56 PHE B 546 GLY B 548 5 3 HELIX 57 57 LEU B 549 GLY B 559 1 11 HELIX 58 58 ILE B 563 GLY B 580 1 18 HELIX 59 59 SER B 582 SER B 599 1 18 HELIX 60 60 THR B 615 ASP B 624 1 10 HELIX 61 61 PRO B 625 LEU B 628 5 4 HELIX 62 62 THR B 633 VAL B 637 5 5 HELIX 63 63 SER B 638 LEU B 645 1 8 HELIX 64 64 SER B 650 MET B 662 1 13 HELIX 65 65 ASP C 11 MET C 16 1 6 HELIX 66 66 ASN C 21 ARG C 30 1 10 HELIX 67 67 ASP C 47 PHE C 65 1 19 HELIX 68 68 PHE C 84 MET C 87 5 4 HELIX 69 69 ASN C 105 ALA C 112 1 8 HELIX 70 70 SER C 120 SER C 136 1 17 HELIX 71 71 ASP C 159 GLN C 183 1 25 HELIX 72 72 LYS C 185 GLN C 194 1 10 HELIX 73 73 ASP C 229 THR C 235 1 7 HELIX 74 74 SER C 250 GLY C 257 1 8 HELIX 75 75 PRO C 276 LYS C 297 1 22 HELIX 76 76 TYR C 298 HIS C 303 1 6 HELIX 77 77 THR C 306 GLU C 316 1 11 HELIX 78 78 ASP C 327 TRP C 332 1 6 HELIX 79 79 PRO C 333 GLY C 348 1 16 HELIX 80 80 ALA C 350 LEU C 361 1 12 HELIX 81 81 ALA C 397 THR C 418 1 22 HELIX 82 82 ALA C 419 ILE C 426 5 8 HELIX 83 83 ASP C 428 GLN C 441 1 14 HELIX 84 84 ALA C 464 LYS C 476 1 13 HELIX 85 85 GLU C 508 ALA C 512 5 5 HELIX 86 86 ASN C 517 SER C 527 1 11 HELIX 87 87 GLY C 548 SER C 553 1 6 HELIX 88 88 MET C 554 GLY C 559 1 6 HELIX 89 89 ILE C 563 PHE C 579 1 17 HELIX 90 90 SER C 582 LEU C 598 1 17 HELIX 91 91 SER C 599 TYR C 601 5 3 HELIX 92 92 THR C 615 ASP C 624 1 10 HELIX 93 93 PRO C 625 GLN C 629 5 5 HELIX 94 94 SER C 650 MET C 662 1 13 SHEET 1 AA 6 ALA A 6 PRO A 8 0 SHEET 2 AA 6 THR A 377 LEU A 379 -1 O LEU A 378 N PHE A 7 SHEET 3 AA 6 VAL A 365 VAL A 367 -1 O VAL A 365 N LEU A 379 SHEET 4 AA 6 TYR A 199 GLN A 206 1 O TYR A 199 N TYR A 366 SHEET 5 AA 6 PHE A 265 GLY A 274 -1 O ARG A 268 N GLN A 206 SHEET 6 AA 6 HIS A 89 PRO A 94 1 N MET A 90 O PHE A 265 SHEET 1 AB 2 GLU A 38 TYR A 40 0 SHEET 2 AB 2 LEU A 43 LEU A 44 -1 O LEU A 43 N TYR A 40 SHEET 1 AC 2 LEU A 143 ARG A 146 0 SHEET 2 AC 2 MET A 646 VAL A 649 -1 O HIS A 647 N ILE A 145 SHEET 1 AD 2 ILE A 211 LEU A 213 0 SHEET 2 AD 2 PHE A 220 SER A 222 -1 O VAL A 221 N THR A 212 SHEET 1 AE 2 MET A 226 ALA A 228 0 SHEET 2 AE 2 LEU A 242 ALA A 244 -1 O PHE A 243 N VAL A 227 SHEET 1 AF 4 ILE A 446 LYS A 451 0 SHEET 2 AF 4 ASP A 454 TRP A 459 -1 O ASP A 454 N LYS A 451 SHEET 3 AF 4 LEU A 319 VAL A 325 -1 O LEU A 319 N TRP A 459 SHEET 4 AF 4 ILE A 488 TYR A 490 -1 O SER A 489 N ASP A 324 SHEET 1 AG 3 ALA A 495 PHE A 496 0 SHEET 2 AG 3 ASP A 499 LEU A 502 -1 O ASP A 499 N PHE A 496 SHEET 3 AG 3 ILE A 513 GLY A 516 -1 O ILE A 513 N LEU A 502 SHEET 1 BA 6 ALA B 6 PRO B 8 0 SHEET 2 BA 6 THR B 377 LEU B 379 -1 O LEU B 378 N PHE B 7 SHEET 3 BA 6 VAL B 365 VAL B 367 -1 O VAL B 365 N LEU B 379 SHEET 4 BA 6 TYR B 199 GLN B 206 1 O TYR B 199 N TYR B 366 SHEET 5 BA 6 PHE B 265 GLY B 274 -1 O ARG B 268 N GLN B 206 SHEET 6 BA 6 HIS B 89 PRO B 94 1 N MET B 90 O PHE B 265 SHEET 1 BB 2 GLU B 38 TYR B 40 0 SHEET 2 BB 2 LEU B 43 LEU B 44 -1 O LEU B 43 N TYR B 40 SHEET 1 BC 2 LEU B 143 ARG B 146 0 SHEET 2 BC 2 MET B 646 VAL B 649 -1 O HIS B 647 N ILE B 145 SHEET 1 BD 2 ILE B 211 LEU B 213 0 SHEET 2 BD 2 PHE B 220 SER B 222 -1 O VAL B 221 N THR B 212 SHEET 1 BE 2 MET B 226 ALA B 228 0 SHEET 2 BE 2 LEU B 242 ALA B 244 -1 O PHE B 243 N VAL B 227 SHEET 1 BF 4 ILE B 446 LYS B 451 0 SHEET 2 BF 4 ASP B 454 TRP B 459 -1 O ASP B 454 N LYS B 451 SHEET 3 BF 4 LEU B 319 VAL B 325 -1 O LEU B 319 N TRP B 459 SHEET 4 BF 4 ILE B 488 TYR B 490 -1 O SER B 489 N ASP B 324 SHEET 1 BG 3 ALA B 495 PHE B 496 0 SHEET 2 BG 3 ASP B 499 LEU B 502 -1 O ASP B 499 N PHE B 496 SHEET 3 BG 3 ILE B 513 GLY B 516 -1 O ILE B 513 N LEU B 502 SHEET 1 CA 6 ALA C 6 PRO C 8 0 SHEET 2 CA 6 THR C 377 LEU C 379 -1 O LEU C 378 N PHE C 7 SHEET 3 CA 6 VAL C 365 VAL C 367 -1 O VAL C 365 N LEU C 379 SHEET 4 CA 6 TYR C 199 GLN C 206 1 O TYR C 199 N TYR C 366 SHEET 5 CA 6 PHE C 265 GLY C 274 -1 O ARG C 268 N GLN C 206 SHEET 6 CA 6 HIS C 89 PRO C 94 1 N MET C 90 O PHE C 265 SHEET 1 CB 2 GLU C 38 TYR C 40 0 SHEET 2 CB 2 LEU C 43 LEU C 44 -1 O LEU C 43 N TYR C 40 SHEET 1 CC 2 LEU C 143 ARG C 146 0 SHEET 2 CC 2 MET C 646 VAL C 649 -1 O HIS C 647 N ILE C 145 SHEET 1 CD 2 ILE C 211 LEU C 213 0 SHEET 2 CD 2 PHE C 220 SER C 222 -1 O VAL C 221 N THR C 212 SHEET 1 CE 2 MET C 226 ALA C 228 0 SHEET 2 CE 2 LEU C 242 ALA C 244 -1 O PHE C 243 N VAL C 227 SHEET 1 CF 4 ILE C 446 LYS C 451 0 SHEET 2 CF 4 ASP C 454 TRP C 459 -1 O ASP C 454 N LYS C 451 SHEET 3 CF 4 LEU C 319 VAL C 325 -1 O LEU C 319 N TRP C 459 SHEET 4 CF 4 ILE C 488 TYR C 490 -1 O SER C 489 N ASP C 324 SHEET 1 CG 3 ALA C 495 PHE C 496 0 SHEET 2 CG 3 ASP C 499 LEU C 502 -1 O ASP C 499 N PHE C 496 SHEET 3 CG 3 ILE C 513 GLY C 516 -1 O ILE C 513 N LEU C 502 LINK OD1 ASP A 454 MG MG A1665 1555 1555 2.10 LINK OE1 GLU A 491 MG MG A1665 1555 1555 2.68 LINK O ALA A 495 MG MG A1665 1555 1555 2.79 LINK O1B ATP A1666 MG MG A1667 1555 1555 2.47 LINK OD1 ASP B 454 MG MG B1665 1555 1555 2.29 LINK OE1 GLU B 491 MG MG B1665 1555 1555 1.95 LINK O ALA B 495 MG MG B1665 1555 1555 2.46 CISPEP 1 ILE A 96 PRO A 97 0 -2.69 CISPEP 2 ILE A 153 PRO A 154 0 1.98 CISPEP 3 ILE B 96 PRO B 97 0 -2.08 CISPEP 4 ILE B 153 PRO B 154 0 1.91 CISPEP 5 ILE C 96 PRO C 97 0 -1.60 CISPEP 6 ILE C 153 PRO C 154 0 2.88 SITE 1 AC1 5 THR A 323 ASP A 454 ALA A 455 GLU A 491 SITE 2 AC1 5 ALA A 495 SITE 1 AC2 6 LYS A 223 ARG A 225 ARG A 268 ARG A 270 SITE 2 AC2 6 SER A 326 MG A1667 SITE 1 AC3 3 ASP A 324 VAL A 325 ATP A1666 SITE 1 AC4 4 THR B 323 ASP B 454 GLU B 491 ALA B 495 SITE 1 AC5 4 LYS B 223 ARG B 225 SER B 326 ASP B 327 SITE 1 AC6 3 LYS C 223 ARG C 225 ASP C 324 CRYST1 107.510 91.710 142.080 90.00 102.05 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009301 0.000000 0.001986 0.00000 SCALE2 0.000000 0.010904 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007197 0.00000