PDB Short entry for 4BE1 HEADER TRANSFERASE/DNA 08-OCT-12 4BE1 TITLE PFV INTASOME WITH INHIBITOR XZ-116 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PFV INTEGRASE, IN, P42IN; COMPND 5 EC: 2.7.7.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 19 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (NON-TRANSFERRED COMPND 9 STRAND); COMPND 10 CHAIN: C; COMPND 11 SYNONYM: PFV U5 DNA; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: 17 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (TRANSFERRED COMPND 15 STRAND); COMPND 16 CHAIN: D; COMPND 17 SYNONYM: PFV U5 DNA; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN SPUMARETROVIRUS; SOURCE 3 ORGANISM_TAXID: 11963; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: HUMAN SPUMARETROVIRUS; SOURCE 9 ORGANISM_TAXID: 11963; SOURCE 10 MOL_ID: 3; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HUMAN SPUMARETROVIRUS; SOURCE 13 ORGANISM_TAXID: 11963 KEYWDS TRANSFERASE-DNA COMPLEX, PROTEIN-DNA COMPLEX, DNA INTEGRATION, KEYWDS 2 ENDONUCLEASE, METAL-BINDING, MULTIFUNCTIONAL ENZYME, NUCLEASE, KEYWDS 3 NUCLEOTIDYLTRANSFERASE, TRANSFERASE, VIRAL NUCLEOPROTEIN, VIRION, KEYWDS 4 DNA-BINDING, ZINC BINDING, HHCC MOTIF, VIRAL PROTEIN, RECOMBINATION, KEYWDS 5 INHIBITOR, RECOMBINATION-INHIBITOR-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.HARE,P.CHEREPANOV REVDAT 6 20-DEC-23 4BE1 1 REMARK LINK REVDAT 5 06-FEB-19 4BE1 1 REMARK REVDAT 4 30-JAN-19 4BE1 1 REMARK REVDAT 3 30-JAN-13 4BE1 1 JRNL REVDAT 2 14-NOV-12 4BE1 1 REMARK REVDAT 1 31-OCT-12 4BE1 0 JRNL AUTH M.METIFIOT,K.MADDALI,B.C.JOHNSON,S.HARE,S.J.SMITH,X.Z.ZHAO, JRNL AUTH 2 C.MARCHAND,T.R.BURKE,S.H.HUGHES,P.CHEREPANOV,Y.POMMIER JRNL TITL ACTIVITIES, CRYSTAL STRUCTURES AND MOLECULAR DYNAMICS OF JRNL TITL 2 DIHYDRO-1H-ISOINDOLE DERIVATIVES, INHIBITORS OF HIV-1 JRNL TITL 3 INTEGRASE. JRNL REF ACS CHEM.BIOL. V. 8 209 2013 JRNL REFN ISSN 1554-8929 JRNL PMID 23075516 JRNL DOI 10.1021/CB300471N REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 41616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2208 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2812 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.24 REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE SET COUNT : 152 REMARK 3 BIN FREE R VALUE : 0.3840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4337 REMARK 3 NUCLEIC ACID ATOMS : 732 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 235 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.53000 REMARK 3 B22 (A**2) : 1.53000 REMARK 3 B33 (A**2) : -3.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.258 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.213 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.688 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5331 ; 0.011 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7424 ; 1.606 ; 1.878 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 550 ; 6.342 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;35.238 ;23.791 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 721 ;17.364 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;19.374 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 810 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3772 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4BE1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1290054397. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07220 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41616 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.710 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.55000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3L2T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.35 M AMMONIUM SULFATE, 25% (V/V) REMARK 280 GLYCEROL, 4.8% (V/V) 1,6-HEXANEDIOL, 50 MM MES-NAOH, 1MM EDTA, REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.97000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 80.51500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 80.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.98500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 80.51500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 80.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 92.95500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 80.51500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 80.51500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.98500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 80.51500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 80.51500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 92.95500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.97000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 28040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 57290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -295.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -61.97000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 GLY A 0 REMARK 465 CYS A 1 REMARK 465 ASN A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 LYS A 5 REMARK 465 PRO A 6 REMARK 465 ASN A 7 REMARK 465 ASN A 376 REMARK 465 GLY A 377 REMARK 465 THR A 378 REMARK 465 THR A 379 REMARK 465 ASN A 380 REMARK 465 ASP A 381 REMARK 465 THR A 382 REMARK 465 ALA A 383 REMARK 465 THR A 384 REMARK 465 MET A 385 REMARK 465 ASP A 386 REMARK 465 HIS A 387 REMARK 465 LEU A 388 REMARK 465 GLU A 389 REMARK 465 LYS A 390 REMARK 465 ASN A 391 REMARK 465 GLU A 392 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 465 GLY B 0 REMARK 465 CYS B 1 REMARK 465 ASN B 2 REMARK 465 THR B 3 REMARK 465 LYS B 4 REMARK 465 LYS B 5 REMARK 465 PRO B 6 REMARK 465 ASN B 7 REMARK 465 LEU B 8 REMARK 465 ASP B 9 REMARK 465 ALA B 10 REMARK 465 GLU B 11 REMARK 465 LEU B 12 REMARK 465 ASP B 13 REMARK 465 GLN B 14 REMARK 465 LEU B 15 REMARK 465 LEU B 16 REMARK 465 GLN B 17 REMARK 465 GLY B 18 REMARK 465 HIS B 19 REMARK 465 TYR B 20 REMARK 465 ILE B 21 REMARK 465 LYS B 22 REMARK 465 GLY B 23 REMARK 465 TYR B 24 REMARK 465 PRO B 25 REMARK 465 LYS B 26 REMARK 465 GLN B 27 REMARK 465 TYR B 28 REMARK 465 THR B 29 REMARK 465 TYR B 30 REMARK 465 PHE B 31 REMARK 465 LEU B 32 REMARK 465 GLU B 33 REMARK 465 ASP B 34 REMARK 465 GLY B 35 REMARK 465 LYS B 36 REMARK 465 VAL B 37 REMARK 465 LYS B 38 REMARK 465 VAL B 39 REMARK 465 SER B 40 REMARK 465 ARG B 41 REMARK 465 PRO B 42 REMARK 465 GLU B 43 REMARK 465 GLY B 44 REMARK 465 VAL B 45 REMARK 465 LYS B 46 REMARK 465 ILE B 47 REMARK 465 ILE B 48 REMARK 465 PRO B 49 REMARK 465 PRO B 50 REMARK 465 GLN B 51 REMARK 465 SER B 52 REMARK 465 ASP B 53 REMARK 465 ARG B 54 REMARK 465 GLN B 55 REMARK 465 LYS B 56 REMARK 465 ILE B 57 REMARK 465 VAL B 58 REMARK 465 LEU B 59 REMARK 465 GLN B 60 REMARK 465 ALA B 61 REMARK 465 HIS B 62 REMARK 465 ASN B 63 REMARK 465 LEU B 64 REMARK 465 ALA B 65 REMARK 465 HIS B 66 REMARK 465 THR B 67 REMARK 465 GLY B 68 REMARK 465 ARG B 69 REMARK 465 GLU B 70 REMARK 465 ALA B 71 REMARK 465 THR B 72 REMARK 465 LEU B 73 REMARK 465 LEU B 74 REMARK 465 LYS B 75 REMARK 465 ILE B 76 REMARK 465 ALA B 77 REMARK 465 ASN B 78 REMARK 465 LEU B 79 REMARK 465 TYR B 80 REMARK 465 TRP B 81 REMARK 465 TRP B 82 REMARK 465 PRO B 83 REMARK 465 ASN B 84 REMARK 465 MET B 85 REMARK 465 ARG B 86 REMARK 465 LYS B 87 REMARK 465 ASP B 88 REMARK 465 VAL B 89 REMARK 465 VAL B 90 REMARK 465 LYS B 91 REMARK 465 GLN B 92 REMARK 465 LEU B 93 REMARK 465 GLY B 94 REMARK 465 ARG B 95 REMARK 465 CYS B 96 REMARK 465 GLN B 97 REMARK 465 GLN B 98 REMARK 465 CYS B 99 REMARK 465 LEU B 100 REMARK 465 ILE B 101 REMARK 465 THR B 102 REMARK 465 ASN B 103 REMARK 465 ALA B 104 REMARK 465 SER B 105 REMARK 465 ASN B 106 REMARK 465 LYS B 107 REMARK 465 ALA B 108 REMARK 465 SER B 109 REMARK 465 GLY B 110 REMARK 465 PRO B 111 REMARK 465 ILE B 112 REMARK 465 LEU B 113 REMARK 465 ARG B 114 REMARK 465 PRO B 115 REMARK 465 THR B 300 REMARK 465 SER B 301 REMARK 465 LEU B 302 REMARK 465 TYR B 303 REMARK 465 HIS B 304 REMARK 465 PRO B 305 REMARK 465 SER B 306 REMARK 465 THR B 307 REMARK 465 PRO B 308 REMARK 465 PRO B 309 REMARK 465 ALA B 310 REMARK 465 SER B 311 REMARK 465 SER B 312 REMARK 465 ARG B 313 REMARK 465 SER B 314 REMARK 465 TRP B 315 REMARK 465 SER B 316 REMARK 465 PRO B 317 REMARK 465 VAL B 318 REMARK 465 VAL B 319 REMARK 465 GLY B 320 REMARK 465 GLN B 321 REMARK 465 LEU B 322 REMARK 465 VAL B 323 REMARK 465 GLN B 324 REMARK 465 GLU B 325 REMARK 465 ARG B 326 REMARK 465 VAL B 327 REMARK 465 ALA B 328 REMARK 465 ARG B 329 REMARK 465 PRO B 330 REMARK 465 ALA B 331 REMARK 465 SER B 332 REMARK 465 LEU B 333 REMARK 465 ARG B 334 REMARK 465 PRO B 335 REMARK 465 ARG B 336 REMARK 465 TRP B 337 REMARK 465 HIS B 338 REMARK 465 LYS B 339 REMARK 465 PRO B 340 REMARK 465 SER B 341 REMARK 465 THR B 342 REMARK 465 VAL B 343 REMARK 465 LEU B 344 REMARK 465 LYS B 345 REMARK 465 VAL B 346 REMARK 465 LEU B 347 REMARK 465 ASN B 348 REMARK 465 PRO B 349 REMARK 465 ARG B 350 REMARK 465 THR B 351 REMARK 465 VAL B 352 REMARK 465 VAL B 353 REMARK 465 ILE B 354 REMARK 465 LEU B 355 REMARK 465 ASP B 356 REMARK 465 HIS B 357 REMARK 465 LEU B 358 REMARK 465 GLY B 359 REMARK 465 ASN B 360 REMARK 465 ASN B 361 REMARK 465 ARG B 362 REMARK 465 THR B 363 REMARK 465 VAL B 364 REMARK 465 SER B 365 REMARK 465 ILE B 366 REMARK 465 ASP B 367 REMARK 465 ASN B 368 REMARK 465 LEU B 369 REMARK 465 LYS B 370 REMARK 465 PRO B 371 REMARK 465 THR B 372 REMARK 465 SER B 373 REMARK 465 HIS B 374 REMARK 465 GLN B 375 REMARK 465 ASN B 376 REMARK 465 GLY B 377 REMARK 465 THR B 378 REMARK 465 THR B 379 REMARK 465 ASN B 380 REMARK 465 ASP B 381 REMARK 465 THR B 382 REMARK 465 ALA B 383 REMARK 465 THR B 384 REMARK 465 MET B 385 REMARK 465 ASP B 386 REMARK 465 HIS B 387 REMARK 465 LEU B 388 REMARK 465 GLU B 389 REMARK 465 LYS B 390 REMARK 465 ASN B 391 REMARK 465 GLU B 392 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 8 CG CD1 CD2 REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 ARG A 329 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 197 CG CD OE1 OE2 REMARK 470 HIS B 213 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 241 CG CD CE NZ REMARK 470 LYS B 262 CG CD CE NZ REMARK 470 GLN B 281 CG CD OE1 NE2 REMARK 470 ARG B 288 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 292 CG CD1 CD2 REMARK 470 LEU B 294 CG CD1 CD2 REMARK 470 LEU B 295 CG CD1 CD2 REMARK 470 GLN B 296 CG CD OE1 NE2 REMARK 470 GLU B 297 CG CD OE1 OE2 REMARK 470 ILE B 298 CG1 CG2 CD1 REMARK 470 ARG B 299 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2037 O HOH A 2134 1.78 REMARK 500 O SER B 258 O LEU B 261 2.11 REMARK 500 O HOH A 2035 O HOH C 2005 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2012 O HOH A 2109 8554 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 62 CG HIS A 62 CD2 0.063 REMARK 500 HIS A 213 CG HIS A 213 CD2 0.064 REMARK 500 HIS A 357 CG HIS A 357 CD2 0.055 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA C 1 C3' - O3' - P ANGL. DEV. = 10.1 DEGREES REMARK 500 DT C 2 C3' - O3' - P ANGL. DEV. = 7.7 DEGREES REMARK 500 DT D 1 C3' - O3' - P ANGL. DEV. = 11.4 DEGREES REMARK 500 DA D 6 C3' - O3' - P ANGL. DEV. = 7.6 DEGREES REMARK 500 DA D 12 C3' - O3' - P ANGL. DEV. = 7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 14 -9.80 -49.35 REMARK 500 GLU A 33 131.96 -178.87 REMARK 500 PHE A 122 -2.21 83.27 REMARK 500 GLN A 186 30.22 -91.63 REMARK 500 GLU A 201 -22.78 -37.20 REMARK 500 HIS A 213 68.59 -152.38 REMARK 500 THR A 240 61.08 -67.60 REMARK 500 LEU A 358 -82.12 -84.99 REMARK 500 PHE B 122 -3.95 75.28 REMARK 500 GLN B 186 36.12 -96.88 REMARK 500 TYR B 212 -13.85 72.16 REMARK 500 HIS B 213 74.52 -117.14 REMARK 500 SER B 216 -106.91 -125.83 REMARK 500 PHE B 278 75.44 -108.05 REMARK 500 GLN B 281 114.64 -36.01 REMARK 500 ILE B 298 47.37 -98.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 393 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 62 NE2 REMARK 620 2 HIS A 66 ND1 101.5 REMARK 620 3 CYS A 96 SG 108.7 106.0 REMARK 620 4 CYS A 99 SG 106.9 115.5 117.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1381 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 128 OD1 REMARK 620 2 ASP A 185 OD2 94.0 REMARK 620 3 CI4 A1383 OAD 96.1 104.7 REMARK 620 4 CI4 A1383 OAC 177.0 88.8 81.9 REMARK 620 5 HOH A2052 O 87.2 85.3 169.2 94.3 REMARK 620 6 HOH A2053 O 86.2 173.9 81.3 91.3 88.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1382 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 128 OD2 REMARK 620 2 GLU A 221 OE1 95.1 REMARK 620 3 GLU A 221 OE2 106.7 62.8 REMARK 620 4 CI4 A1383 OAB 162.2 86.5 89.8 REMARK 620 5 CI4 A1383 OAD 94.5 165.9 104.4 87.5 REMARK 620 6 HOH A2054 O 75.9 102.7 165.2 86.5 89.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 128 OD1 REMARK 620 2 ASP B 185 OD2 95.6 REMARK 620 3 HOH B2006 O 98.7 165.6 REMARK 620 4 HOH B2018 O 100.8 83.9 95.1 REMARK 620 5 DA C 19 O3' 172.0 79.4 86.2 84.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 393 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1376 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 A 1377 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1378 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1379 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1380 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1381 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1382 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CI4 A 1383 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1384 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2X6N RELATED DB: PDB REMARK 900 HUMAN FOAMY VIRUS INTEGRASE - CATALYTIC CORE. MANGANESE- BOUND REMARK 900 STRUCTURE. REMARK 900 RELATED ID: 2X6S RELATED DB: PDB REMARK 900 HUMAN FOAMY VIRUS INTEGRASE - CATALYTIC CORE. MAGNESIUM- BOUND REMARK 900 STRUCTURE. REMARK 900 RELATED ID: 2X74 RELATED DB: PDB REMARK 900 HUMAN FOAMY VIRUS INTEGRASE - CATALYTIC CORE. REMARK 900 RELATED ID: 2X78 RELATED DB: PDB REMARK 900 HUMAN FOAMY VIRUS INTEGRASE - CATALYTIC CORE. REMARK 900 RELATED ID: 4BAC RELATED DB: PDB REMARK 900 PROTOTYPE FOAMY VIRUS STRAND TRANSFER COMPLEXES ON PRODUCT DNA REMARK 900 RELATED ID: 4BDY RELATED DB: PDB REMARK 900 PFV INTASOME WITH INHIBITOR XZ-89 REMARK 900 RELATED ID: 4BDZ RELATED DB: PDB REMARK 900 PFV INTASOME WITH INHIBITOR XZ-90 REMARK 900 RELATED ID: 4BE0 RELATED DB: PDB REMARK 900 PFV INTASOME WITH INHIBITOR XZ-115 REMARK 900 RELATED ID: 4BE2 RELATED DB: PDB REMARK 900 PFV INTASOME WITH INHIBITOR XZ-259 DBREF 4BE1 A 1 392 UNP P14350 POL_FOAMV 752 1143 DBREF 4BE1 B 1 392 UNP P14350 POL_FOAMV 752 1143 DBREF 4BE1 C 1 19 PDB 4BE1 4BE1 1 19 DBREF 4BE1 D 1 17 PDB 4BE1 4BE1 1 17 SEQADV 4BE1 GLY A -2 UNP P14350 EXPRESSION TAG SEQADV 4BE1 PRO A -1 UNP P14350 EXPRESSION TAG SEQADV 4BE1 GLY A 0 UNP P14350 EXPRESSION TAG SEQADV 4BE1 SER A 217 UNP P14350 GLY 968 VARIANT SEQADV 4BE1 GLY A 218 UNP P14350 SER 969 VARIANT SEQADV 4BE1 GLY B -2 UNP P14350 EXPRESSION TAG SEQADV 4BE1 PRO B -1 UNP P14350 EXPRESSION TAG SEQADV 4BE1 GLY B 0 UNP P14350 EXPRESSION TAG SEQADV 4BE1 SER B 217 UNP P14350 GLY 968 VARIANT SEQADV 4BE1 GLY B 218 UNP P14350 SER 969 VARIANT SEQRES 1 A 395 GLY PRO GLY CYS ASN THR LYS LYS PRO ASN LEU ASP ALA SEQRES 2 A 395 GLU LEU ASP GLN LEU LEU GLN GLY HIS TYR ILE LYS GLY SEQRES 3 A 395 TYR PRO LYS GLN TYR THR TYR PHE LEU GLU ASP GLY LYS SEQRES 4 A 395 VAL LYS VAL SER ARG PRO GLU GLY VAL LYS ILE ILE PRO SEQRES 5 A 395 PRO GLN SER ASP ARG GLN LYS ILE VAL LEU GLN ALA HIS SEQRES 6 A 395 ASN LEU ALA HIS THR GLY ARG GLU ALA THR LEU LEU LYS SEQRES 7 A 395 ILE ALA ASN LEU TYR TRP TRP PRO ASN MET ARG LYS ASP SEQRES 8 A 395 VAL VAL LYS GLN LEU GLY ARG CYS GLN GLN CYS LEU ILE SEQRES 9 A 395 THR ASN ALA SER ASN LYS ALA SER GLY PRO ILE LEU ARG SEQRES 10 A 395 PRO ASP ARG PRO GLN LYS PRO PHE ASP LYS PHE PHE ILE SEQRES 11 A 395 ASP TYR ILE GLY PRO LEU PRO PRO SER GLN GLY TYR LEU SEQRES 12 A 395 TYR VAL LEU VAL VAL VAL ASP GLY MET THR GLY PHE THR SEQRES 13 A 395 TRP LEU TYR PRO THR LYS ALA PRO SER THR SER ALA THR SEQRES 14 A 395 VAL LYS SER LEU ASN VAL LEU THR SER ILE ALA ILE PRO SEQRES 15 A 395 LYS VAL ILE HIS SER ASP GLN GLY ALA ALA PHE THR SER SEQRES 16 A 395 SER THR PHE ALA GLU TRP ALA LYS GLU ARG GLY ILE HIS SEQRES 17 A 395 LEU GLU PHE SER THR PRO TYR HIS PRO GLN SER SER GLY SEQRES 18 A 395 LYS VAL GLU ARG LYS ASN SER ASP ILE LYS ARG LEU LEU SEQRES 19 A 395 THR LYS LEU LEU VAL GLY ARG PRO THR LYS TRP TYR ASP SEQRES 20 A 395 LEU LEU PRO VAL VAL GLN LEU ALA LEU ASN ASN THR TYR SEQRES 21 A 395 SER PRO VAL LEU LYS TYR THR PRO HIS GLN LEU LEU PHE SEQRES 22 A 395 GLY ILE ASP SER ASN THR PRO PHE ALA ASN GLN ASP THR SEQRES 23 A 395 LEU ASP LEU THR ARG GLU GLU GLU LEU SER LEU LEU GLN SEQRES 24 A 395 GLU ILE ARG THR SER LEU TYR HIS PRO SER THR PRO PRO SEQRES 25 A 395 ALA SER SER ARG SER TRP SER PRO VAL VAL GLY GLN LEU SEQRES 26 A 395 VAL GLN GLU ARG VAL ALA ARG PRO ALA SER LEU ARG PRO SEQRES 27 A 395 ARG TRP HIS LYS PRO SER THR VAL LEU LYS VAL LEU ASN SEQRES 28 A 395 PRO ARG THR VAL VAL ILE LEU ASP HIS LEU GLY ASN ASN SEQRES 29 A 395 ARG THR VAL SER ILE ASP ASN LEU LYS PRO THR SER HIS SEQRES 30 A 395 GLN ASN GLY THR THR ASN ASP THR ALA THR MET ASP HIS SEQRES 31 A 395 LEU GLU LYS ASN GLU SEQRES 1 B 395 GLY PRO GLY CYS ASN THR LYS LYS PRO ASN LEU ASP ALA SEQRES 2 B 395 GLU LEU ASP GLN LEU LEU GLN GLY HIS TYR ILE LYS GLY SEQRES 3 B 395 TYR PRO LYS GLN TYR THR TYR PHE LEU GLU ASP GLY LYS SEQRES 4 B 395 VAL LYS VAL SER ARG PRO GLU GLY VAL LYS ILE ILE PRO SEQRES 5 B 395 PRO GLN SER ASP ARG GLN LYS ILE VAL LEU GLN ALA HIS SEQRES 6 B 395 ASN LEU ALA HIS THR GLY ARG GLU ALA THR LEU LEU LYS SEQRES 7 B 395 ILE ALA ASN LEU TYR TRP TRP PRO ASN MET ARG LYS ASP SEQRES 8 B 395 VAL VAL LYS GLN LEU GLY ARG CYS GLN GLN CYS LEU ILE SEQRES 9 B 395 THR ASN ALA SER ASN LYS ALA SER GLY PRO ILE LEU ARG SEQRES 10 B 395 PRO ASP ARG PRO GLN LYS PRO PHE ASP LYS PHE PHE ILE SEQRES 11 B 395 ASP TYR ILE GLY PRO LEU PRO PRO SER GLN GLY TYR LEU SEQRES 12 B 395 TYR VAL LEU VAL VAL VAL ASP GLY MET THR GLY PHE THR SEQRES 13 B 395 TRP LEU TYR PRO THR LYS ALA PRO SER THR SER ALA THR SEQRES 14 B 395 VAL LYS SER LEU ASN VAL LEU THR SER ILE ALA ILE PRO SEQRES 15 B 395 LYS VAL ILE HIS SER ASP GLN GLY ALA ALA PHE THR SER SEQRES 16 B 395 SER THR PHE ALA GLU TRP ALA LYS GLU ARG GLY ILE HIS SEQRES 17 B 395 LEU GLU PHE SER THR PRO TYR HIS PRO GLN SER SER GLY SEQRES 18 B 395 LYS VAL GLU ARG LYS ASN SER ASP ILE LYS ARG LEU LEU SEQRES 19 B 395 THR LYS LEU LEU VAL GLY ARG PRO THR LYS TRP TYR ASP SEQRES 20 B 395 LEU LEU PRO VAL VAL GLN LEU ALA LEU ASN ASN THR TYR SEQRES 21 B 395 SER PRO VAL LEU LYS TYR THR PRO HIS GLN LEU LEU PHE SEQRES 22 B 395 GLY ILE ASP SER ASN THR PRO PHE ALA ASN GLN ASP THR SEQRES 23 B 395 LEU ASP LEU THR ARG GLU GLU GLU LEU SER LEU LEU GLN SEQRES 24 B 395 GLU ILE ARG THR SER LEU TYR HIS PRO SER THR PRO PRO SEQRES 25 B 395 ALA SER SER ARG SER TRP SER PRO VAL VAL GLY GLN LEU SEQRES 26 B 395 VAL GLN GLU ARG VAL ALA ARG PRO ALA SER LEU ARG PRO SEQRES 27 B 395 ARG TRP HIS LYS PRO SER THR VAL LEU LYS VAL LEU ASN SEQRES 28 B 395 PRO ARG THR VAL VAL ILE LEU ASP HIS LEU GLY ASN ASN SEQRES 29 B 395 ARG THR VAL SER ILE ASP ASN LEU LYS PRO THR SER HIS SEQRES 30 B 395 GLN ASN GLY THR THR ASN ASP THR ALA THR MET ASP HIS SEQRES 31 B 395 LEU GLU LYS ASN GLU SEQRES 1 C 19 DA DT DT DG DT DC DA DT DG DG DA DA DT SEQRES 2 C 19 DT DT DC DG DC DA SEQRES 1 D 17 DT DG DC DG DA DA DA DT DT DC DC DA DT SEQRES 2 D 17 DG DA DC DA HET ZN A 393 1 HET SO4 A1376 5 HET NH4 A1377 1 HET GOL A1378 6 HET GOL A1379 6 HET GOL A1380 6 HET MG A1381 1 HET MG A1382 1 HET CI4 A1383 21 HET SO4 A1384 5 HET SO4 B1300 5 HET GOL B1301 6 HET MG B1302 1 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM NH4 AMMONIUM ION HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETNAM CI4 2-(3-CHLORO-2-FLUOROBENZYL)-6,7-DIHYDROXY-2,3-DIHYDRO- HETNAM 2 CI4 1H-ISOINDOL-1-ONE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN CI4 XZ-116 FORMUL 5 ZN ZN 2+ FORMUL 6 SO4 3(O4 S 2-) FORMUL 7 NH4 H4 N 1+ FORMUL 8 GOL 4(C3 H8 O3) FORMUL 11 MG 3(MG 2+) FORMUL 13 CI4 C15 H11 CL F N O3 FORMUL 18 HOH *235(H2 O) HELIX 1 1 LEU A 8 GLN A 17 1 10 HELIX 2 2 PRO A 50 LEU A 64 1 15 HELIX 3 3 GLY A 68 ALA A 77 1 10 HELIX 4 4 ASN A 84 CYS A 96 1 13 HELIX 5 5 CYS A 96 ASN A 103 1 8 HELIX 6 6 SER A 162 THR A 174 1 13 HELIX 7 7 GLY A 187 SER A 192 1 6 HELIX 8 8 SER A 192 GLU A 201 1 10 HELIX 9 9 HIS A 213 SER A 216 5 4 HELIX 10 10 SER A 217 VAL A 236 1 20 HELIX 11 11 TRP A 242 ASP A 244 5 3 HELIX 12 12 LEU A 245 ASN A 255 1 11 HELIX 13 13 THR A 264 GLY A 271 1 8 HELIX 14 14 THR A 287 SER A 301 1 15 HELIX 15 15 SER B 162 THR B 174 1 13 HELIX 16 16 GLY B 187 SER B 192 1 6 HELIX 17 17 SER B 192 ARG B 202 1 11 HELIX 18 18 SER B 217 VAL B 236 1 20 HELIX 19 19 TRP B 242 ASP B 244 5 3 HELIX 20 20 LEU B 245 ASN B 255 1 11 HELIX 21 21 THR B 264 GLY B 271 1 8 HELIX 22 22 THR B 287 ILE B 298 1 12 SHEET 1 AA 3 LEU A 32 GLU A 33 0 SHEET 2 AA 3 LYS A 36 ARG A 41 -1 O LYS A 36 N GLU A 33 SHEET 3 AA 3 GLY A 44 ILE A 47 -1 O GLY A 44 N ARG A 41 SHEET 1 AB 2 ALA A 108 SER A 109 0 SHEET 2 AB 2 SER A 314 TRP A 315 1 N TRP A 315 O ALA A 108 SHEET 1 AC 5 THR A 153 THR A 158 0 SHEET 2 AC 5 TYR A 141 ASP A 147 -1 O TYR A 141 N THR A 158 SHEET 3 AC 5 LYS A 124 ILE A 130 -1 O PHE A 126 N VAL A 146 SHEET 4 AC 5 VAL A 181 SER A 184 1 O VAL A 181 N PHE A 125 SHEET 5 AC 5 HIS A 205 PHE A 208 1 O HIS A 205 N ILE A 182 SHEET 1 AD 5 ASN A 361 SER A 365 0 SHEET 2 AD 5 THR A 351 LEU A 355 -1 O VAL A 352 N VAL A 364 SHEET 3 AD 5 SER A 341 ASN A 348 -1 O THR A 342 N LEU A 355 SHEET 4 AD 5 LEU A 322 GLU A 325 -1 O VAL A 323 N SER A 341 SHEET 5 AD 5 LEU A 369 PRO A 371 -1 O LYS A 370 N GLN A 324 SHEET 1 BA 5 THR B 153 THR B 158 0 SHEET 2 BA 5 TYR B 141 ASP B 147 -1 O TYR B 141 N THR B 158 SHEET 3 BA 5 PHE B 125 ILE B 130 -1 O PHE B 126 N VAL B 146 SHEET 4 BA 5 VAL B 181 SER B 184 1 O VAL B 181 N PHE B 125 SHEET 5 BA 5 HIS B 205 PHE B 208 1 O HIS B 205 N ILE B 182 LINK NE2 HIS A 62 ZN ZN A 393 1555 1555 1.96 LINK ND1 HIS A 66 ZN ZN A 393 1555 1555 1.98 LINK SG CYS A 96 ZN ZN A 393 1555 1555 2.22 LINK SG CYS A 99 ZN ZN A 393 1555 1555 2.34 LINK OD1 ASP A 128 MG MG A1381 1555 1555 2.22 LINK OD2 ASP A 128 MG MG A1382 1555 1555 2.16 LINK OD2 ASP A 185 MG MG A1381 1555 1555 2.21 LINK OE1 GLU A 221 MG MG A1382 1555 1555 2.18 LINK OE2 GLU A 221 MG MG A1382 1555 1555 1.95 LINK MG MG A1381 OAD CI4 A1383 1555 1555 2.02 LINK MG MG A1381 OAC CI4 A1383 1555 1555 2.20 LINK MG MG A1381 O HOH A2052 1555 1555 2.04 LINK MG MG A1381 O HOH A2053 1555 1555 1.93 LINK MG MG A1382 OAB CI4 A1383 1555 1555 2.11 LINK MG MG A1382 OAD CI4 A1383 1555 1555 2.29 LINK MG MG A1382 O HOH A2054 1555 1555 2.12 LINK OD1 ASP B 128 MG MG B1302 1555 1555 2.24 LINK OD2 ASP B 185 MG MG B1302 1555 1555 2.36 LINK MG MG B1302 O HOH B2006 1555 1555 2.48 LINK MG MG B1302 O HOH B2018 1555 1555 2.60 LINK MG MG B1302 O3' DA C 19 1555 3555 2.24 CISPEP 1 GLY A 131 PRO A 132 0 2.09 CISPEP 2 GLY B 131 PRO B 132 0 8.55 SITE 1 AC1 4 HIS A 62 HIS A 66 CYS A 96 CYS A 99 SITE 1 AC2 5 LYS B 219 ARG B 222 SER B 258 PRO B 259 SITE 2 AC2 5 VAL B 260 SITE 1 AC3 4 HIS A 338 LYS A 339 HIS A 357 HOH A2156 SITE 1 AC4 1 ASP A 116 SITE 1 AC5 3 SER A 162 THR A 163 SER A 164 SITE 1 AC6 3 SER A 136 GLN A 137 LYS A 241 SITE 1 AC7 2 GLN A 296 ASP B 273 SITE 1 AC8 3 LEU A 79 TYR A 80 PRO A 277 SITE 1 AC9 5 ASP A 128 ASP A 185 CI4 A1383 HOH A2052 SITE 2 AC9 5 HOH A2053 SITE 1 BC1 4 ASP A 128 GLU A 221 CI4 A1383 HOH A2054 SITE 1 BC2 12 ASP A 128 ASP A 185 PRO A 214 GLU A 221 SITE 2 BC2 12 MG A1381 MG A1382 SO4 A1384 HOH A2053 SITE 3 BC2 12 HOH A2054 DG C 4 DC D 16 DA D 17 SITE 1 BC3 5 ASP B 128 ASP B 185 HOH B2006 HOH B2018 SITE 2 BC3 5 DA C 19 SITE 1 BC4 7 ASP A 185 GLN A 186 GLY A 187 PRO A 211 SITE 2 BC4 7 TYR A 212 CI4 A1383 HOH A2085 CRYST1 161.030 161.030 123.940 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006210 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006210 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008068 0.00000