PDB Short entry for 4BKJ HEADER TRANSFERASE 25-APR-13 4BKJ TITLE CRYSTAL STRUCTURE OF THE HUMAN DDR1 KINASE DOMAIN IN COMPLEX WITH TITLE 2 IMATINIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPITHELIAL DISCOIDIN DOMAIN-CONTAINING RECEPTOR 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN, RESDIUES 564-876; COMPND 5 SYNONYM: EPITHELIAL DISCOIDIN DOMAIN RECEPTOR 1, CD167 ANTIGEN-LIKE COMPND 6 FAMILY MEMBER A, CELL ADHESION KINASE, DISCOIDIN RECEPTOR TYROSINE COMPND 7 KINASE, HGK2, MAMMARY CARCINOMA KINASE 10, MCK-10, PROTEIN-TYROSINE COMPND 8 KINASE 3A, PROTEIN-TYROSINE KINASE RTK-6, TRK E, TYROSINE KINASE DDR, COMPND 9 TYROSINE-PROTEIN KINASE CAK, CD167A; COMPND 10 EC: 2.7.10.1; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFB-LIC-BSE; SOURCE 11 OTHER_DETAILS: MAMMALIAN GENE COLLECTION (MGC) KEYWDS TRANSFERASE, RECEPTOR, RTK, COLLAGEN, DISCOIDIN DOMAIN, RECEPTOR KEYWDS 2 TYROSINE KINASE EXPDTA X-RAY DIFFRACTION AUTHOR P.CANNING,J.M.ELKINS,S.GOUBIN,P.MAHAJAN,T.KROJER,M.VOLLMAR,F.VON AUTHOR 2 DELFT,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,A.BULLOCK REVDAT 6 20-DEC-23 4BKJ 1 REMARK HETSYN REVDAT 5 24-JAN-18 4BKJ 1 JRNL REVDAT 4 18-JUN-14 4BKJ 1 JRNL REVDAT 3 07-MAY-14 4BKJ 1 JRNL REVDAT 2 23-APR-14 4BKJ 1 JRNL REVDAT 1 22-MAY-13 4BKJ 0 JRNL AUTH P.CANNING,J.M.ELKINS,S.GOUBIN,P.MAHAJAN,T.KROJER,M.VOLLMAR, JRNL AUTH 2 F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,A.BULLOCK JRNL TITL STRUCTURAL MECHANISMS DETERMINING INHIBITION OF THE COLLAGEN JRNL TITL 2 RECEPTOR DDR1 BY SELECTIVE AND MULTI-TARGETED TYPE II KINASE JRNL TITL 3 INHIBITORS JRNL REF J.MOL.BIOL. V. 426 2457 2014 JRNL REFN ISSN 0022-2836 JRNL PMID 24768818 JRNL DOI 10.1016/J.JMB.2014.04.014 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 69069 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3690 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5021 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.3070 REMARK 3 BIN FREE R VALUE SET COUNT : 236 REMARK 3 BIN FREE R VALUE : 0.3840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4650 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 150 REMARK 3 SOLVENT ATOMS : 375 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.20000 REMARK 3 B22 (A**2) : -17.49000 REMARK 3 B33 (A**2) : 19.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.019 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.018 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.049 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.745 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4974 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4732 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6733 ; 1.235 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10826 ; 0.886 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 610 ; 5.190 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 225 ;31.424 ;23.422 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 798 ;11.891 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;14.332 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 732 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5589 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1180 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2388 ; 1.478 ; 3.369 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2387 ; 1.478 ; 3.368 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2981 ; 2.075 ; 5.280 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2586 ; 2.248 ; 4.086 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 600 913 B 600 913 17287 0.10 0.05 REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.712 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.288 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 600 A 638 REMARK 3 ORIGIN FOR THE GROUP (A): -31.0729 20.6757 36.9633 REMARK 3 T TENSOR REMARK 3 T11: 0.0230 T22: 0.1549 REMARK 3 T33: 0.0754 T12: -0.0193 REMARK 3 T13: -0.0054 T23: -0.0271 REMARK 3 L TENSOR REMARK 3 L11: 2.3985 L22: 1.9792 REMARK 3 L33: 4.5422 L12: 0.6278 REMARK 3 L13: -1.8747 L23: -0.4199 REMARK 3 S TENSOR REMARK 3 S11: 0.0525 S12: -0.1034 S13: -0.0936 REMARK 3 S21: 0.1442 S22: -0.0887 S23: -0.0277 REMARK 3 S31: 0.0391 S32: 0.0995 S33: 0.0362 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 639 A 677 REMARK 3 ORIGIN FOR THE GROUP (A): -23.8691 18.6508 37.0646 REMARK 3 T TENSOR REMARK 3 T11: 0.2042 T22: 0.1532 REMARK 3 T33: 0.0589 T12: 0.0300 REMARK 3 T13: 0.0012 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 3.8277 L22: 2.3636 REMARK 3 L33: 1.9340 L12: 0.1086 REMARK 3 L13: 1.8395 L23: -1.4566 REMARK 3 S TENSOR REMARK 3 S11: 0.0995 S12: -0.1278 S13: -0.1247 REMARK 3 S21: 0.2924 S22: -0.0339 S23: 0.0097 REMARK 3 S31: -0.0169 S32: -0.0127 S33: -0.0656 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 678 A 734 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1725 28.9029 38.3636 REMARK 3 T TENSOR REMARK 3 T11: 0.0262 T22: 0.1847 REMARK 3 T33: 0.0378 T12: 0.0101 REMARK 3 T13: 0.0114 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.5214 L22: 2.4559 REMARK 3 L33: 1.0116 L12: 0.9849 REMARK 3 L13: 0.2140 L23: 0.0248 REMARK 3 S TENSOR REMARK 3 S11: 0.0634 S12: 0.0375 S13: 0.0576 REMARK 3 S21: 0.2084 S22: -0.0584 S23: 0.2338 REMARK 3 S31: 0.0235 S32: -0.1011 S33: -0.0050 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 735 A 813 REMARK 3 ORIGIN FOR THE GROUP (A): -10.0948 32.8743 34.9535 REMARK 3 T TENSOR REMARK 3 T11: 0.0103 T22: 0.1521 REMARK 3 T33: 0.0322 T12: -0.0072 REMARK 3 T13: -0.0073 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 2.0988 L22: 2.1594 REMARK 3 L33: 0.8054 L12: -0.4497 REMARK 3 L13: -0.1416 L23: -0.3646 REMARK 3 S TENSOR REMARK 3 S11: -0.0139 S12: 0.2725 S13: -0.1235 REMARK 3 S21: -0.0922 S22: -0.0349 S23: 0.1388 REMARK 3 S31: 0.0545 S32: -0.1190 S33: 0.0488 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 814 A 913 REMARK 3 ORIGIN FOR THE GROUP (A): 2.0155 38.1726 32.8196 REMARK 3 T TENSOR REMARK 3 T11: 0.0285 T22: 0.1743 REMARK 3 T33: 0.0397 T12: -0.0209 REMARK 3 T13: -0.0052 T23: 0.0353 REMARK 3 L TENSOR REMARK 3 L11: 1.9249 L22: 1.8062 REMARK 3 L33: 1.3453 L12: -0.1350 REMARK 3 L13: -0.6360 L23: 0.2532 REMARK 3 S TENSOR REMARK 3 S11: -0.0042 S12: 0.2426 S13: 0.0854 REMARK 3 S21: -0.1352 S22: 0.0194 S23: -0.1715 REMARK 3 S31: -0.0821 S32: 0.1323 S33: -0.0152 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 600 B 627 REMARK 3 ORIGIN FOR THE GROUP (A): 8.7311 -13.4868 12.3130 REMARK 3 T TENSOR REMARK 3 T11: 0.3063 T22: 0.3462 REMARK 3 T33: 0.2625 T12: -0.1240 REMARK 3 T13: -0.0315 T23: 0.0975 REMARK 3 L TENSOR REMARK 3 L11: 6.3314 L22: 3.8432 REMARK 3 L33: 3.5536 L12: -0.6832 REMARK 3 L13: 1.3610 L23: 0.0609 REMARK 3 S TENSOR REMARK 3 S11: 0.0932 S12: -0.7146 S13: -0.4078 REMARK 3 S21: 0.2597 S22: -0.1132 S23: 0.2933 REMARK 3 S31: -0.1307 S32: 0.0117 S33: 0.0199 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 628 B 650 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7831 -20.3128 -0.1982 REMARK 3 T TENSOR REMARK 3 T11: 0.3259 T22: 0.2370 REMARK 3 T33: 0.5747 T12: -0.1040 REMARK 3 T13: -0.0687 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 8.0194 L22: 1.2126 REMARK 3 L33: 10.3663 L12: -1.7040 REMARK 3 L13: 3.2316 L23: 0.1541 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: 0.4952 S13: 0.0485 REMARK 3 S21: -0.1638 S22: 0.0850 S23: -0.1367 REMARK 3 S31: -0.3184 S32: 0.3584 S33: -0.0702 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 651 B 703 REMARK 3 ORIGIN FOR THE GROUP (A): 6.0267 -5.7738 7.9647 REMARK 3 T TENSOR REMARK 3 T11: 0.2116 T22: 0.2264 REMARK 3 T33: 0.1488 T12: -0.0729 REMARK 3 T13: -0.0000 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 4.9579 L22: 2.0200 REMARK 3 L33: 1.4245 L12: 0.9785 REMARK 3 L13: 0.4094 L23: -0.3774 REMARK 3 S TENSOR REMARK 3 S11: 0.2017 S12: -0.3560 S13: -0.2492 REMARK 3 S21: 0.2284 S22: -0.0501 S23: 0.3614 REMARK 3 S31: 0.1956 S32: -0.3381 S33: -0.1516 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 704 B 735 REMARK 3 ORIGIN FOR THE GROUP (A): 32.9067 -3.0430 10.8607 REMARK 3 T TENSOR REMARK 3 T11: 0.1344 T22: 0.1653 REMARK 3 T33: 0.1669 T12: 0.0644 REMARK 3 T13: -0.0280 T23: 0.0212 REMARK 3 L TENSOR REMARK 3 L11: 9.7758 L22: 4.7287 REMARK 3 L33: 3.2559 L12: 2.5184 REMARK 3 L13: -0.6586 L23: -0.8531 REMARK 3 S TENSOR REMARK 3 S11: -0.0175 S12: 0.0425 S13: -0.5204 REMARK 3 S21: -0.1615 S22: 0.0015 S23: -0.6351 REMARK 3 S31: 0.2996 S32: 0.2544 S33: 0.0159 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 736 B 913 REMARK 3 ORIGIN FOR THE GROUP (A): 24.0733 11.9262 11.3040 REMARK 3 T TENSOR REMARK 3 T11: 0.0090 T22: 0.1243 REMARK 3 T33: 0.0062 T12: 0.0021 REMARK 3 T13: -0.0031 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.3386 L22: 0.9337 REMARK 3 L33: 1.7981 L12: 0.3088 REMARK 3 L13: 0.1174 L23: 0.5292 REMARK 3 S TENSOR REMARK 3 S11: 0.0233 S12: -0.1153 S13: -0.0494 REMARK 3 S21: 0.0359 S22: -0.0433 S23: -0.0171 REMARK 3 S31: 0.0989 S32: -0.0144 S33: 0.0201 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4BKJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-APR-13. REMARK 100 THE DEPOSITION ID IS D_1290056641. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72847 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 45.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.63000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3ZOS REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 6.3, 34% PEG 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.03700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.28750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.03700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 90.28750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.03700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.03700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 599 REMARK 465 LYS A 721 REMARK 465 ALA A 722 REMARK 465 ALA A 723 REMARK 465 GLU A 724 REMARK 465 GLY A 725 REMARK 465 ALA A 726 REMARK 465 PRO A 727 REMARK 465 GLY A 728 REMARK 465 ASP A 729 REMARK 465 GLY A 730 REMARK 465 GLN A 731 REMARK 465 ALA A 732 REMARK 465 ALA A 733 REMARK 465 GLN A 734 REMARK 465 GLY A 735 REMARK 465 VAL A 799 REMARK 465 GLN A 800 REMARK 465 GLY A 801 REMARK 465 ARG A 802 REMARK 465 SER B 599 REMARK 465 ALA B 722 REMARK 465 ALA B 723 REMARK 465 GLU B 724 REMARK 465 GLY B 725 REMARK 465 ALA B 726 REMARK 465 PRO B 727 REMARK 465 GLY B 728 REMARK 465 ASP B 729 REMARK 465 GLY B 730 REMARK 465 GLN B 731 REMARK 465 ALA B 732 REMARK 465 ALA B 733 REMARK 465 GLN B 734 REMARK 465 VAL B 799 REMARK 465 GLN B 800 REMARK 465 GLY B 801 REMARK 465 ARG B 802 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 600 CG SD CE REMARK 470 ARG A 602 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 618 CG CD OE1 OE2 REMARK 470 GLN A 620 CG CD OE1 NE2 REMARK 470 LYS A 646 CG CD CE NZ REMARK 470 LYS A 663 CG CD CE NZ REMARK 470 LYS A 671 CD CE NZ REMARK 470 ARG A 686 NE CZ NH1 NH2 REMARK 470 GLU A 705 CG CD OE1 OE2 REMARK 470 ASP A 720 CG OD1 OD2 REMARK 470 ARG A 798 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 819 CG CD CE NZ REMARK 470 GLU A 855 CD OE1 OE2 REMARK 470 GLU A 893 CG CD OE1 OE2 REMARK 470 GLN A 900 CG CD OE1 NE2 REMARK 470 ARG A 903 CZ NH1 NH2 REMARK 470 MET B 600 CG SD CE REMARK 470 ARG B 602 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 611 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 614 CD OE1 OE2 REMARK 470 LEU B 638 CG CD1 CD2 REMARK 470 LEU B 642 CG CD1 CD2 REMARK 470 LYS B 646 CG CD CE NZ REMARK 470 ARG B 658 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 663 CG CD CE NZ REMARK 470 ASN B 664 CG OD1 ND2 REMARK 470 LYS B 674 CG CD CE NZ REMARK 470 LYS B 721 CG CD CE NZ REMARK 470 ARG B 798 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 903 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2120 O HOH B 2140 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 645 O HOH A 2002 3455 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 765 -12.77 82.61 REMARK 500 ASP A 766 43.41 -145.45 REMARK 500 GLU A 907 -81.12 -111.00 REMARK 500 ARG B 765 -12.40 82.61 REMARK 500 ASP B 766 43.76 -145.63 REMARK 500 GLU B 907 -82.02 -111.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STI A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1010 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STI B 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1009 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BKI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HUMAN DDR1 KINASE DOMAIN IN COMPLEX WITH REMARK 900 DDR1-IN-1 DBREF 4BKJ A 601 913 UNP Q08345 DDR1_HUMAN 564 876 DBREF 4BKJ B 601 913 UNP Q08345 DDR1_HUMAN 564 876 SEQADV 4BKJ SER A 599 UNP Q08345 EXPRESSION TAG SEQADV 4BKJ MET A 600 UNP Q08345 EXPRESSION TAG SEQADV 4BKJ SER B 599 UNP Q08345 EXPRESSION TAG SEQADV 4BKJ MET B 600 UNP Q08345 EXPRESSION TAG SEQRES 1 A 315 SER MET PRO ARG VAL ASP PHE PRO ARG SER ARG LEU ARG SEQRES 2 A 315 PHE LYS GLU LYS LEU GLY GLU GLY GLN PHE GLY GLU VAL SEQRES 3 A 315 HIS LEU CYS GLU VAL ASP SER PRO GLN ASP LEU VAL SER SEQRES 4 A 315 LEU ASP PHE PRO LEU ASN VAL ARG LYS GLY HIS PRO LEU SEQRES 5 A 315 LEU VAL ALA VAL LYS ILE LEU ARG PRO ASP ALA THR LYS SEQRES 6 A 315 ASN ALA ARG ASN ASP PHE LEU LYS GLU VAL LYS ILE MET SEQRES 7 A 315 SER ARG LEU LYS ASP PRO ASN ILE ILE ARG LEU LEU GLY SEQRES 8 A 315 VAL CYS VAL GLN ASP ASP PRO LEU CYS MET ILE THR ASP SEQRES 9 A 315 TYR MET GLU ASN GLY ASP LEU ASN GLN PHE LEU SER ALA SEQRES 10 A 315 HIS GLN LEU GLU ASP LYS ALA ALA GLU GLY ALA PRO GLY SEQRES 11 A 315 ASP GLY GLN ALA ALA GLN GLY PRO THR ILE SER TYR PRO SEQRES 12 A 315 MET LEU LEU HIS VAL ALA ALA GLN ILE ALA SER GLY MET SEQRES 13 A 315 ARG TYR LEU ALA THR LEU ASN PHE VAL HIS ARG ASP LEU SEQRES 14 A 315 ALA THR ARG ASN CYS LEU VAL GLY GLU ASN PHE THR ILE SEQRES 15 A 315 LYS ILE ALA ASP PHE GLY MET SER ARG ASN LEU TYR ALA SEQRES 16 A 315 GLY ASP TYR TYR ARG VAL GLN GLY ARG ALA VAL LEU PRO SEQRES 17 A 315 ILE ARG TRP MET ALA TRP GLU CYS ILE LEU MET GLY LYS SEQRES 18 A 315 PHE THR THR ALA SER ASP VAL TRP ALA PHE GLY VAL THR SEQRES 19 A 315 LEU TRP GLU VAL LEU MET LEU CYS ARG ALA GLN PRO PHE SEQRES 20 A 315 GLY GLN LEU THR ASP GLU GLN VAL ILE GLU ASN ALA GLY SEQRES 21 A 315 GLU PHE PHE ARG ASP GLN GLY ARG GLN VAL TYR LEU SER SEQRES 22 A 315 ARG PRO PRO ALA CYS PRO GLN GLY LEU TYR GLU LEU MET SEQRES 23 A 315 LEU ARG CYS TRP SER ARG GLU SER GLU GLN ARG PRO PRO SEQRES 24 A 315 PHE SER GLN LEU HIS ARG PHE LEU ALA GLU ASP ALA LEU SEQRES 25 A 315 ASN THR VAL SEQRES 1 B 315 SER MET PRO ARG VAL ASP PHE PRO ARG SER ARG LEU ARG SEQRES 2 B 315 PHE LYS GLU LYS LEU GLY GLU GLY GLN PHE GLY GLU VAL SEQRES 3 B 315 HIS LEU CYS GLU VAL ASP SER PRO GLN ASP LEU VAL SER SEQRES 4 B 315 LEU ASP PHE PRO LEU ASN VAL ARG LYS GLY HIS PRO LEU SEQRES 5 B 315 LEU VAL ALA VAL LYS ILE LEU ARG PRO ASP ALA THR LYS SEQRES 6 B 315 ASN ALA ARG ASN ASP PHE LEU LYS GLU VAL LYS ILE MET SEQRES 7 B 315 SER ARG LEU LYS ASP PRO ASN ILE ILE ARG LEU LEU GLY SEQRES 8 B 315 VAL CYS VAL GLN ASP ASP PRO LEU CYS MET ILE THR ASP SEQRES 9 B 315 TYR MET GLU ASN GLY ASP LEU ASN GLN PHE LEU SER ALA SEQRES 10 B 315 HIS GLN LEU GLU ASP LYS ALA ALA GLU GLY ALA PRO GLY SEQRES 11 B 315 ASP GLY GLN ALA ALA GLN GLY PRO THR ILE SER TYR PRO SEQRES 12 B 315 MET LEU LEU HIS VAL ALA ALA GLN ILE ALA SER GLY MET SEQRES 13 B 315 ARG TYR LEU ALA THR LEU ASN PHE VAL HIS ARG ASP LEU SEQRES 14 B 315 ALA THR ARG ASN CYS LEU VAL GLY GLU ASN PHE THR ILE SEQRES 15 B 315 LYS ILE ALA ASP PHE GLY MET SER ARG ASN LEU TYR ALA SEQRES 16 B 315 GLY ASP TYR TYR ARG VAL GLN GLY ARG ALA VAL LEU PRO SEQRES 17 B 315 ILE ARG TRP MET ALA TRP GLU CYS ILE LEU MET GLY LYS SEQRES 18 B 315 PHE THR THR ALA SER ASP VAL TRP ALA PHE GLY VAL THR SEQRES 19 B 315 LEU TRP GLU VAL LEU MET LEU CYS ARG ALA GLN PRO PHE SEQRES 20 B 315 GLY GLN LEU THR ASP GLU GLN VAL ILE GLU ASN ALA GLY SEQRES 21 B 315 GLU PHE PHE ARG ASP GLN GLY ARG GLN VAL TYR LEU SER SEQRES 22 B 315 ARG PRO PRO ALA CYS PRO GLN GLY LEU TYR GLU LEU MET SEQRES 23 B 315 LEU ARG CYS TRP SER ARG GLU SER GLU GLN ARG PRO PRO SEQRES 24 B 315 PHE SER GLN LEU HIS ARG PHE LEU ALA GLU ASP ALA LEU SEQRES 25 B 315 ASN THR VAL HET STI A1000 37 HET EDO A1001 4 HET EDO A1002 4 HET EDO A1003 4 HET EDO A1004 4 HET EDO A1005 4 HET EDO A1006 4 HET EDO A1007 4 HET EDO A1008 4 HET EDO A1009 4 HET EDO A1010 4 HET STI B1000 37 HET EDO B1001 4 HET EDO B1002 4 HET EDO B1003 4 HET EDO B1004 4 HET EDO B1005 4 HET EDO B1006 4 HET EDO B1007 4 HET EDO B1008 4 HET EDO B1009 4 HETNAM STI 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4- HETNAM 2 STI PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN STI STI-571; IMATINIB HETSYN EDO ETHYLENE GLYCOL FORMUL 3 STI 2(C29 H31 N7 O) FORMUL 4 EDO 19(C2 H6 O2) FORMUL 24 HOH *375(H2 O) HELIX 1 1 PRO A 606 SER A 608 5 3 HELIX 2 2 SER A 631 LEU A 635 5 5 HELIX 3 3 THR A 662 LEU A 679 1 18 HELIX 4 4 ASP A 708 ALA A 715 1 8 HELIX 5 5 SER A 739 LEU A 760 1 22 HELIX 6 6 ALA A 768 ARG A 770 5 3 HELIX 7 7 GLU A 776 PHE A 778 5 3 HELIX 8 8 ARG A 789 TYR A 796 5 8 HELIX 9 9 PRO A 806 MET A 810 5 5 HELIX 10 10 ALA A 811 GLY A 818 1 8 HELIX 11 11 THR A 821 MET A 838 1 18 HELIX 12 12 THR A 849 ASP A 863 1 15 HELIX 13 13 PRO A 877 TRP A 888 1 12 HELIX 14 14 GLU A 891 ARG A 895 5 5 HELIX 15 15 PRO A 897 GLU A 907 1 11 HELIX 16 16 ALA A 909 VAL A 913 5 5 HELIX 17 17 PRO B 606 SER B 608 5 3 HELIX 18 18 SER B 631 LEU B 635 5 5 HELIX 19 19 THR B 662 LEU B 679 1 18 HELIX 20 20 ASP B 708 ALA B 715 1 8 HELIX 21 21 SER B 739 LEU B 760 1 22 HELIX 22 22 ALA B 768 ARG B 770 5 3 HELIX 23 23 GLU B 776 PHE B 778 5 3 HELIX 24 24 ARG B 789 TYR B 796 5 8 HELIX 25 25 PRO B 806 MET B 810 5 5 HELIX 26 26 ALA B 811 GLY B 818 1 8 HELIX 27 27 THR B 821 MET B 838 1 18 HELIX 28 28 THR B 849 ASP B 863 1 15 HELIX 29 29 PRO B 877 TRP B 888 1 12 HELIX 30 30 GLU B 891 ARG B 895 5 5 HELIX 31 31 PRO B 897 GLU B 907 1 11 HELIX 32 32 ALA B 909 VAL B 913 5 5 SHEET 1 AA 5 LEU A 610 GLY A 619 0 SHEET 2 AA 5 GLY A 622 VAL A 629 -1 O GLY A 622 N GLY A 619 SHEET 3 AA 5 LEU A 651 LEU A 657 -1 O VAL A 652 N CYS A 627 SHEET 4 AA 5 CYS A 698 ASP A 702 -1 O MET A 699 N LYS A 655 SHEET 5 AA 5 LEU A 687 CYS A 691 -1 N LEU A 688 O ILE A 700 SHEET 1 AB 2 GLN A 717 LEU A 718 0 SHEET 2 AB 2 THR A 737 ILE A 738 1 N ILE A 738 O GLN A 717 SHEET 1 AC 2 CYS A 772 VAL A 774 0 SHEET 2 AC 2 ILE A 780 ILE A 782 -1 O LYS A 781 N LEU A 773 SHEET 1 BA 5 LEU B 610 GLY B 619 0 SHEET 2 BA 5 GLY B 622 VAL B 629 -1 O GLY B 622 N GLY B 619 SHEET 3 BA 5 LEU B 651 LEU B 657 -1 O VAL B 652 N CYS B 627 SHEET 4 BA 5 CYS B 698 ASP B 702 -1 O MET B 699 N LYS B 655 SHEET 5 BA 5 LEU B 687 CYS B 691 -1 N LEU B 688 O ILE B 700 SHEET 1 BB 2 GLN B 717 LEU B 718 0 SHEET 2 BB 2 THR B 737 ILE B 738 1 N ILE B 738 O GLN B 717 SHEET 1 BC 2 CYS B 772 VAL B 774 0 SHEET 2 BC 2 ILE B 780 ILE B 782 -1 O LYS B 781 N LEU B 773 CISPEP 1 ASP A 695 PRO A 696 0 -1.83 CISPEP 2 ASP B 695 PRO B 696 0 -1.93 SITE 1 AC1 16 VAL A 624 ALA A 653 LYS A 655 GLU A 672 SITE 2 AC1 16 MET A 676 ILE A 685 THR A 701 TYR A 703 SITE 3 AC1 16 MET A 704 VAL A 763 HIS A 764 LEU A 773 SITE 4 AC1 16 ALA A 783 ASP A 784 PHE A 785 HOH A2208 SITE 1 AC2 8 ASN A 706 PHE A 712 GLY A 775 GLU A 776 SITE 2 AC2 8 ASN A 777 PHE A 778 HOH A2083 HOH A2120 SITE 1 AC3 10 MET A 810 ALA A 811 TRP A 812 ILE A 815 SITE 2 AC3 10 TRP A 827 PHE A 845 VAL A 853 ASN A 856 SITE 3 AC3 10 ALA A 857 EDO A1007 SITE 1 AC4 4 TRP A 812 GLU A 813 ARG A 890 SER A 892 SITE 1 AC5 6 THR A 822 PRO A 897 PHE A 898 SER A 899 SITE 2 AC5 6 EDO A1006 HOH A2197 SITE 1 AC6 6 ASN A 683 ALA A 748 GLN A 749 SER A 752 SITE 2 AC6 6 HIS A 902 HOH A2071 SITE 1 AC7 7 THR A 822 ALA A 823 SER A 892 ARG A 895 SITE 2 AC7 7 PRO A 897 VAL A 913 EDO A1004 SITE 1 AC8 7 TRP A 827 PHE A 845 TYR A 869 LEU A 870 SITE 2 AC8 7 TRP A 888 EDO A1002 HOH A2133 SITE 1 AC9 7 ASP A 634 VAL A 636 PHE A 712 HIS A 716 SITE 2 AC9 7 PRO A 736 THR A 737 HOH A2026 SITE 1 BC1 5 HIS A 745 GLN A 749 ASN A 777 THR A 779 SITE 2 BC1 5 HOH A2071 SITE 1 BC2 3 HOH A2211 ASP B 668 GLU B 672 SITE 1 BC3 17 VAL B 624 ALA B 653 LYS B 655 GLU B 672 SITE 2 BC3 17 MET B 676 ILE B 685 MET B 699 THR B 701 SITE 3 BC3 17 TYR B 703 MET B 704 VAL B 763 HIS B 764 SITE 4 BC3 17 LEU B 773 ALA B 783 ASP B 784 PHE B 785 SITE 5 BC3 17 HOH B2160 SITE 1 BC4 3 VAL B 913 EDO B1002 HOH B2158 SITE 1 BC5 4 CYS B 876 PRO B 877 EDO B1001 HOH B2128 SITE 1 BC6 5 ARG B 895 PRO B 897 VAL B 913 EDO B1004 SITE 2 BC6 5 HOH B2159 SITE 1 BC7 6 THR B 822 PRO B 897 PHE B 898 SER B 899 SITE 2 BC7 6 EDO B1003 HOH B2149 SITE 1 BC8 4 GLU B 813 ARG B 890 GLU B 891 SER B 892 SITE 1 BC9 5 ASN B 706 GLY B 775 GLU B 776 ASN B 777 SITE 2 BC9 5 PHE B 778 SITE 1 CC1 8 ILE B 807 ARG B 808 MET B 810 ILE B 815 SITE 2 CC1 8 PHE B 845 VAL B 853 ASN B 856 HOH B2086 SITE 1 CC2 4 GLY B 818 LYS B 819 PHE B 820 ASN B 911 SITE 1 CC3 8 ARG A 607 LEU A 610 ILE A 656 HOH A2008 SITE 2 CC3 8 HOH A2021 GLN B 847 THR B 849 GLN B 852 CRYST1 60.074 60.074 180.575 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016646 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016646 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005538 0.00000 MTRIX1 1 -0.015800 0.999900 0.003900 -14.66970 1 MTRIX2 1 0.999600 0.015900 -0.022600 11.75100 1 MTRIX3 1 -0.022600 0.003600 -0.999700 45.57980 1